View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8292_high_5 (Length: 220)

Name: NF8292_high_5
Description: NF8292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8292_high_5
NF8292_high_5
[»] chr3 (12 HSPs)
chr3 (1-175)||(9856453-9856627)
chr3 (1-52)||(17755844-17755895)
chr3 (1-52)||(19057164-19057215)
chr3 (1-52)||(9240747-9240798)
chr3 (1-52)||(25716845-25716896)
chr3 (1-52)||(25937844-25937895)
chr3 (56-114)||(9240859-9240917)
chr3 (56-116)||(5565074-5565134)
chr3 (60-110)||(9241009-9241059)
chr3 (56-110)||(17755736-17755790)
chr3 (56-110)||(19057056-19057110)
chr3 (72-116)||(837271-837315)
[»] chr8 (7 HSPs)
chr8 (1-55)||(13461806-13461860)
chr8 (1-52)||(38294911-38294962)
chr8 (58-115)||(604382-604439)
chr8 (20-55)||(38294969-38295004)
chr8 (58-115)||(604557-604614)
chr8 (56-105)||(13461879-13461928)
chr8 (56-105)||(31249373-31249422)
[»] chr5 (4 HSPs)
chr5 (1-52)||(7779559-7779610)
chr5 (56-115)||(7779439-7779498)
chr5 (56-115)||(14854327-14854386)
chr5 (56-105)||(3432999-3433048)
[»] chr7 (11 HSPs)
chr7 (56-114)||(4455363-4455421)
chr7 (1-52)||(16377563-16377614)
chr7 (1-52)||(4455482-4455533)
chr7 (1-52)||(16376423-16376474)
chr7 (2-52)||(5553812-5553862)
chr7 (59-115)||(4454919-4454975)
chr7 (72-115)||(23591481-23591524)
chr7 (56-115)||(38694861-38694920)
chr7 (56-105)||(16377478-16377527)
chr7 (1-50)||(24788725-24788774)
chr7 (20-52)||(5553869-5553901)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-52)||(12419-12470)
[»] chr2 (14 HSPs)
chr2 (1-52)||(17930419-17930470)
chr2 (1-58)||(41075759-41075816)
chr2 (1-58)||(41076324-41076381)
chr2 (1-52)||(11131355-11131406)
chr2 (56-114)||(15255830-15255888)
chr2 (56-116)||(41076470-41076530)
chr2 (72-115)||(29550128-29550171)
chr2 (1-52)||(38857748-38857799)
chr2 (56-115)||(38857854-38857913)
chr2 (1-48)||(41076042-41076089)
chr2 (72-114)||(3249867-3249909)
chr2 (60-114)||(17930535-17930589)
chr2 (23-55)||(11131313-11131345)
chr2 (19-55)||(17930476-17930512)
[»] chr6 (15 HSPs)
chr6 (1-51)||(17201476-17201526)
chr6 (1-54)||(12296005-12296058)
chr6 (56-116)||(24223576-24223636)
chr6 (1-52)||(24223464-24223515)
chr6 (56-114)||(12295927-12295985)
chr6 (1-50)||(17079944-17079993)
chr6 (58-114)||(17199982-17200038)
chr6 (56-115)||(16799563-16799622)
chr6 (20-55)||(17200571-17200606)
chr6 (56-103)||(17203662-17203709)
chr6 (1-52)||(24223109-24223160)
chr6 (2-52)||(6601875-6601925)
chr6 (20-54)||(16799510-16799544)
chr6 (56-114)||(17200320-17200378)
chr6 (58-115)||(24223211-24223268)
[»] chr4 (6 HSPs)
chr4 (2-52)||(19553377-19553427)
chr4 (56-118)||(46883329-46883391)
chr4 (5-52)||(29013796-29013843)
chr4 (60-115)||(47428297-47428352)
chr4 (1-51)||(9711335-9711384)
chr4 (1-55)||(46883410-46883466)
[»] chr1 (7 HSPs)
chr1 (1-52)||(11928311-11928362)
chr1 (1-52)||(41460966-41461017)
chr1 (1-52)||(49484051-49484102)
chr1 (1-52)||(52740982-52741033)
chr1 (1-52)||(46533030-46533081)
chr1 (74-115)||(6537500-6537541)
chr1 (1-42)||(23482589-23482630)
[»] scaffold0368 (1 HSPs)
scaffold0368 (5-52)||(279-326)


Alignment Details
Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 9856453 - 9856627
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattgctgttagagggaaattataaggttaaattgttacagatctaataaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  9856453 gagaaatattagggatttttgcattttagaggaaatttgttagattaaattgctgttagagggaaattattaggttaagttgttacagatctaataaaat 9856552  T
Q  101 taatagataaggatacaaaatattttgaaataatcctttnnnnnnnnncataaaagatttttattccttttccct 175  Q
    |||||||||||||||||||||||||||||||||||||||         ||||||||||||| |||||||||||||    
T  9856553 taatagataaggatacaaaatattttgaaataatcctttaaaaaaaaacataaaagattttaattccttttccct 9856627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17755895 - 17755844
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  17755895 gagaaatattagggattgctgcattttagaggaaatttgttaggttaaattg 17755844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19057215 - 19057164
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  19057215 gagaaatattagggattgctgcattttagaggaaatttgttaggttaaattg 19057164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9240747 - 9240798
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  9240747 gagaaatattagggattgctgcatttttgaggaaatttgttaggttaaattg 9240798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25716845 - 25716896
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||||||| |||||||||| ||||||||    
T  25716845 gagaaatattagggattgctgcattttagagggaatttgttagcttaaattg 25716896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25937895 - 25937844
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||| ||||||| |||||||||||||||||||    
T  25937895 gagaaatattagggattgctgcatgttagagggaatttgttaggttaaattg 25937844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 9240859 - 9240917
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggat 114  Q
    ||||||||||||||| ||||||| ||||| ||||  |||||||||||||| ||||||||    
T  9240859 ttagagggaaattattaggttaagttgttgcagacgtaataaaattaataaataaggat 9240917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 5565134 - 5565074
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggatac 116  Q
    ||||||||||| ||| ||||||| ||||| |||| |||||||||||||||  |||||||||    
T  5565134 ttagagggaaaatattaggttaagttgttgcagacctaataaaattaataattaaggatac 5565074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 9241009 - 9241059
Alignment:
Q  60 agggaaattataaggttaaattgttacagatctaataaaattaatagataa 110  Q
    ||||||||||| ||||||| ||||| |||| ||||||||||||||| ||||    
T  9241009 agggaaattattaggttaagttgttgcagagctaataaaattaataaataa 9241059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 17755790 - 17755736
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataa 110  Q
    ||||||||||||||| ||||||||||| | | || ||||||||||||||| ||||    
T  17755790 ttagagggaaattattaggttaaattgctgcggacctaataaaattaataaataa 17755736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 19057110 - 19057056
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataa 110  Q
    ||||||||||||||| ||||||||||| | | || ||||||||||||||| ||||    
T  19057110 ttagagggaaattattaggttaaattgctgcggacctaataaaattaataaataa 19057056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 837271 - 837315
Alignment:
Q  72 aggttaaattgttacagatctaataaaattaatagataaggatac 116  Q
    ||||||||||||| ||||  |||||||||||||| ||||||||||    
T  837271 aggttaaattgttgcagacataataaaattaataaataaggatac 837315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13461806 - 13461860
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattgctg 55  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  13461806 gagaaatattagggattgttgcattttagagggaatttgttaggttaaattgctg 13461860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38294911 - 38294962
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  38294911 gagaaatattagggattgctgcattttagagggaatttgttaggttaaattg 38294962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 604382 - 604439
Alignment:
Q  58 agagggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||| ||| ||||||| ||| ||||||||||| |||||||||| |||||||||    
T  604382 agagggaaaatattaggttaagttgctacagatctaacaaaattaataaataaggata 604439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 38294969 - 38295004
Alignment:
Q  20 tgcattttagaggaaatttgttaggttaaattgctg 55  Q
    ||||||||||| ||||||||||||||||||||||||    
T  38294969 tgcattttagatgaaatttgttaggttaaattgctg 38295004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 604557 - 604614
Alignment:
Q  58 agagggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||| ||| ||||||| ||| ||||||||||| |||||||||| | |||||||    
T  604557 agagggaaaatattaggttaagttgctacagatctaacaaaattaataaacaaggata 604614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 13461879 - 13461928
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaata 105  Q
    ||||||||||||||  ||||||| ||||| || |||||||||||||||||    
T  13461879 ttagagggaaattagtaggttaacttgttgcaaatctaataaaattaata 13461928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 31249373 - 31249422
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaata 105  Q
    ||||||||||||||| | ||||| ||| | ||||||||||||||||||||    
T  31249373 ttagagggaaattattatgttaagttgatgcagatctaataaaattaata 31249422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7779610 - 7779559
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  7779610 gagaaatattagggattgttgcattttagagggaatttgttaggttaaattg 7779559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 7779498 - 7779439
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||||||||| ||||||| |||||  ||| ||||||||||||||| |||||||||    
T  7779498 ttagagggaaattattaggttaagttgttgtagacctaataaaattaataaataaggata 7779439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 14854386 - 14854327
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||||||||| ||||||| ||| | || | ||||||||||||||| |||||||||    
T  14854386 ttagagggaaattattaggttaagttgctgcaaacctaataaaattaataaataaggata 14854327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 3433048 - 3432999
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaata 105  Q
    ||||||| ||||||| ||||||| ||||| || |||||||||||||||||    
T  3433048 ttagaggaaaattattaggttaagttgttgcaaatctaataaaattaata 3432999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 4455421 - 4455363
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggat 114  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||    
T  4455421 ttagagggaaattattaggttaaattgttgcagacctaataaaattaataaataaggat 4455363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16377563 - 16377614
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  16377563 gagaaatattagggattgctgcattttagaggaaatttgataggttaaattg 16377614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 4455533 - 4455482
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||| ||||    
T  4455533 gagaaatattagggattgctgcattttagagggaatttgttaggttatattg 4455482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16376423 - 16376474
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  |||| |||||||| |||||||||||||||||||    
T  16376423 gagaaatattagggattgctgcactttagagggaatttgttaggttaaattg 16376474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 5553812 - 5553862
Alignment:
Q  2 agaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||| ||||| |||||||||||||  |||||||||||||||||||    
T  5553812 agaaatattaaggattgttgcattttagagagaatttgttaggttaaattg 5553862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 4454975 - 4454919
Alignment:
Q  59 gagggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    |||||||| ||| ||||||| ||||| |||| ||||||||||||||| |||||||||    
T  4454975 gagggaaaatattaggttaagttgttgcagacctaataaaattaataaataaggata 4454919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 23591481 - 23591524
Alignment:
Q  72 aggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||    
T  23591481 aggttaaattgttgcagatctaacaaaattaataaataaggata 23591524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 38694861 - 38694920
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||||||||| ||||||| ||| | |||| |||||||| |||||| |||||||||    
T  38694861 ttagagggaaattattaggttaagttgctgcagacctaataaacttaataaataaggata 38694920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 16377478 - 16377527
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaata 105  Q
    ||||||||||||||| ||||||| ||  | ||||||||||||||||||||    
T  16377478 ttagagggaaattattaggttaagttactgcagatctaataaaattaata 16377527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24788725 - 24788774
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaat 50  Q
    |||||||||||| ||||  |||||||| | ||||||||||||||||||||    
T  24788725 gagaaatattagtgattgctgcatttttgtggaaatttgttaggttaaat 24788774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 5553869 - 5553901
Alignment:
Q  20 tgcattttagaggaaatttgttaggttaaattg 52  Q
    ||||||||||| |||||||||||||||||||||    
T  5553869 tgcattttagatgaaatttgttaggttaaattg 5553901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12419 - 12470
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  12419 gagaaatattagggattgttgtattttagagggaatttgttaggttaaattg 12470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17930419 - 17930470
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  17930419 gagaaatattagggattgctgcattttagagggaatttgttaggttaaattg 17930470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41075759 - 41075816
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattgctgtta 58  Q
    |||||||||||||||||  ||||||||||||  ||||||||||||||||||| |||||    
T  41075759 gagaaatattagggattgctgcattttagagagaatttgttaggttaaattgttgtta 41075816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41076324 - 41076381
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattgctgtta 58  Q
    |||||||||||||||||  ||||||||||||  ||||||||||||||||||| |||||    
T  41076324 gagaaatattagggattgctgcattttagagagaatttgttaggttaaattgttgtta 41076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11131406 - 11131355
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||||||| |||||| ||||||||||||    
T  11131406 gagaaatattagggattgctgcattttagagggaatttgataggttaaattg 11131355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 15255830 - 15255888
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggat 114  Q
    ||||||||||||||| ||||||| ||||| |||| ||||| ||||||||| ||||||||    
T  15255830 ttagagggaaattattaggttaagttgttgcagacctaattaaattaataaataaggat 15255888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 41076470 - 41076530
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggatac 116  Q
    |||||| |||||||| ||||||| ||||| ||||  |||||||||||||| ||||||||||    
T  41076470 ttagagagaaattattaggttaagttgttgcagacttaataaaattaataaataaggatac 41076530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 29550171 - 29550128
Alignment:
Q  72 aggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||    
T  29550171 aggttaaattgttgcagacctaataaaattaataaataaggata 29550128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38857748 - 38857799
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    ||||||||||||||||| |||||||||| ||  ||||| |||||||||||||    
T  38857748 gagaaatattagggattgttgcattttaaagagaatttattaggttaaattg 38857799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 38857854 - 38857913
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||||||||| | ||||| ||| || ||| ||||||||||||||| |||||||||    
T  38857854 ttagagggaaattattaagttaagttgctatagacctaataaaattaataaataaggata 38857913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41076042 - 41076089
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaa 48  Q
    |||||||||||||||||  ||||||||||||  |||||||||||||||    
T  41076042 gagaaatattagggattgctgcattttagagagaatttgttaggttaa 41076089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 3249867 - 3249909
Alignment:
Q  72 aggttaaattgttacagatctaataaaattaatagataaggat 114  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||    
T  3249867 aggttaaattgttgcagatctaacaaaattaataaataaggat 3249909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 17930535 - 17930589
Alignment:
Q  60 agggaaattataaggttaaattgttacagatctaataaaattaatagataaggat 114  Q
    |||| |||||| ||||||| ||||| |||| ||||||||||||||| ||||||||    
T  17930535 aggggaattattaggttaagttgttgcagacctaataaaattaataaataaggat 17930589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 11131345 - 11131313
Alignment:
Q  23 attttagaggaaatttgttaggttaaattgctg 55  Q
    |||||||| ||||||||||||||||||||||||    
T  11131345 attttagatgaaatttgttaggttaaattgctg 11131313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 17930476 - 17930512
Alignment:
Q  19 ttgcattttagaggaaatttgttaggttaaattgctg 55  Q
    |||||||||||| | ||||||||||||||||||||||    
T  17930476 ttgcattttagatggaatttgttaggttaaattgctg 17930512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17201526 - 17201476
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaatt 51  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  17201526 gagaaatattagggattgctgcattttagagggaatttgttaggttaaatt 17201476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12296058 - 12296005
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattgct 54  Q
    |||||||||||| ||||  ||||||||||||| |||||||||||||||||||||    
T  12296058 gagaaatattagagattgctgcattttagagggaatttgttaggttaaattgct 12296005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 24223576 - 24223636
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggatac 116  Q
    ||||||||||||||| ||||||| ||| | |||| ||||||||||||||| ||||||||||    
T  24223576 ttagagggaaattattaggttaagttgctgcagacctaataaaattaataaataaggatac 24223636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24223464 - 24223515
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||||||| |||||| ||||||||||||    
T  24223464 gagaaatattagggattgctgcattttagagggaatttgataggttaaattg 24223515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 12295985 - 12295927
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggat 114  Q
    |||||||||||| || ||||||| ||||| |||| ||||||||||||||| ||||||||    
T  12295985 ttagagggaaatcattaggttaagttgttgcagacctaataaaattaataaataaggat 12295927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17079944 - 17079993
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaat 50  Q
    ||||||||||| |||||  ||||||||||||| |||||||||||||||||    
T  17079944 gagaaatattaaggattgctgcattttagagggaatttgttaggttaaat 17079993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 17200038 - 17199982
Alignment:
Q  58 agagggaaattataaggttaaattgttacagatctaataaaattaatagataaggat 114  Q
    ||||||||| ||| ||||||||||| |||||| |||| |||||||||| ||||||||    
T  17200038 agagggaaaatattaggttaaattgctacagacctaacaaaattaataaataaggat 17199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 16799563 - 16799622
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||||||||| ||||| | ||| | |||| ||||||||||||||| |||||||||    
T  16799563 ttagagggaaattattaggttcagttgctgcagacctaataaaattaataaataaggata 16799622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 17200606 - 17200571
Alignment:
Q  20 tgcattttagaggaaatttgttaggttaaattgctg 55  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17200606 tgcattttagatgaaatttgttaggttaaattgctg 17200571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 17203709 - 17203662
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaa 103  Q
    ||||||||||||||| ||||||| ||||| |||| |||||||||||||    
T  17203709 ttagagggaaattattaggttaagttgttgcagacctaataaaattaa 17203662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24223109 - 24223160
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||||||  |||||| ||||||||||||    
T  24223109 gagaaatattagggattgctgcattttagagtgaatttgataggttaaattg 24223160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 6601875 - 6601925
Alignment:
Q  2 agaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    ||||||||||| ||||  ||||||||||||| |||||||||||| ||||||    
T  6601875 agaaatattagagattgctgcattttagagggaatttgttaggtgaaattg 6601925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 16799510 - 16799544
Alignment:
Q  20 tgcattttagaggaaatttgttaggttaaattgct 54  Q
    ||||||||||| |||||||||||||||||||||||    
T  16799510 tgcattttagatgaaatttgttaggttaaattgct 16799544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 17200378 - 17200320
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggat 114  Q
    ||||| ||||||||| ||||||| ||| | |||| ||||||||||||||| ||||||||    
T  17200378 ttagaaggaaattattaggttaagttgctgcagacctaataaaattaataaataaggat 17200320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 24223211 - 24223268
Alignment:
Q  58 agagggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||||||||| ||||||| ||| | |||| | ||||||||||||| |||||||||    
T  24223211 agagggaaattattaggttaagttgatgcagaccaaataaaattaataaataaggata 24223268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 19553427 - 19553377
Alignment:
Q  2 agaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  19553427 agaaatattagggattgctgcattttagagggaatttgttaggttaaattg 19553377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 46883391 - 46883329
Alignment:
Q  56 ttagagggaaattataaggttaaattgttacagatctaataaaattaatagataaggatacaa 118  Q
    ||||||||||||||| ||||||| || || |||| ||||||||||||||| ||||||||||||    
T  46883391 ttagagggaaattattaggttaagttattgcagacctaataaaattaataaataaggatacaa 46883329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 29013796 - 29013843
Alignment:
Q  5 aatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||  ||||||||||||| ||||||||| |||||||||    
T  29013796 aatattagggattgctgcattttagagggaatttgttaagttaaattg 29013843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 47428297 - 47428352
Alignment:
Q  60 agggaaattataaggttaaattgttacagatctaataaaattaatagataaggata 115  Q
    ||||||| ||| |||||||||||||  |||||||| |||||||||| |||||||||    
T  47428297 agggaaaatattaggttaaattgttgtagatctaacaaaattaataaataaggata 47428352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9711384 - 9711335
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaatt 51  Q
    ||||||||||||  ||| |||||||||||| ||||||||||||||||||||    
T  9711384 gagaaatattaga-attgttgcattttagatgaaatttgttaggttaaatt 9711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46883466 - 46883410
Alignment:
Q  1 gagaaatattagggatttttgcatttta--gaggaaatttgttaggttaaattgctg 55  Q
    |||||||| ||||||||  |||||||||  |||| ||||||||||||||||||||||    
T  46883466 gagaaataatagggattgctgcattttaaagaggtaatttgttaggttaaattgctg 46883410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11928362 - 11928311
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||||||| || ||||||||||||||||    
T  11928362 gagaaatattagggattgctgcattttagagggaaattgttaggttaaattg 11928311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41461017 - 41460966
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||||||| |||||| ||||||||||||    
T  41461017 gagaaatattagggattgctgcattttagagggaatttgataggttaaattg 41460966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 49484102 - 49484051
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    ||||||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  49484102 gagaaatattagggattgttgcatgttagagagaatttgttaggttaaattg 49484051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 52741033 - 52740982
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||||||  ||||||||| | |||||||||||||||||||||    
T  52741033 gagaaatattagggattgctgcattttaaatgaaatttgttaggttaaattg 52740982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46533081 - 46533030
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    ||||||||||| ||||| | |||||||||||  |||||||||||||||||||    
T  46533081 gagaaatattatggattgtagcattttagagataatttgttaggttaaattg 46533030  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 6537500 - 6537541
Alignment:
Q  74 gttaaattgttacagatctaataaaattaatagataaggata 115  Q
    |||||||||||||||| |||| |||||||||| |||||||||    
T  6537500 gttaaattgttacagacctaacaaaattaataaataaggata 6537541  T

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Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23482589 - 23482630
Alignment:
Q  1 gagaaatattagggatttttgcattttagaggaaatttgtta 42  Q
    |||||||||||| ||||  |||||||||||||||||||||||    
T  23482589 gagaaatattagagattgctgcattttagaggaaatttgtta 23482630  T

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Target: scaffold0368 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 279 - 326
Alignment:
Q  5 aatattagggatttttgcattttagaggaaatttgttaggttaaattg 52  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  279 aatattagggattgctgcattttatagggaatttgttaggttaaattg 326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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