View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8294A_low_108 (Length: 305)
Name: NF8294A_low_108
Description: NF8294A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8294A_low_108 |
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Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 6 - 299
Target Start/End: Complemental strand, 9086631 - 9086338
Alignment:
| Q |
6 |
aatgactatatatgtttagacatgctgataacatcttgcagcatcctgaagacattgagacatgtccatagcatttatctgacatttttgctacccctaa |
105 |
Q |
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| T |
9086631 |
aatgactatatatgcttagacatgctgataacatcttgcagcatcctgaagacattgagacatgtccatagcatttatctgacatttttgctacccctaa |
9086532 |
T |
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| Q |
106 |
tgtcagagctatgaataatagtggtagattctattccaactatggtgactaaaatgaaaaatgctaaacttacctaagccttcatttgtagaaatcaaag |
205 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9086531 |
tgtcagggctatgaataatagtggtagattctattccaactatggtgactaaaatgaaaaatgctaaacttacctaagccttcatttgtagaaatcaaag |
9086432 |
T |
|
| Q |
206 |
atgcagttttttctttaaagcagaagagtgatatcggtctttatatatggatttggtgccactttttcatcataattttgaagatattgttgga |
299 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
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| T |
9086431 |
atgcagttttttctttaaagcagaagagtgatattggtctttatatatggatttggtggcactttttcatcataattttgaagatattattgga |
9086338 |
T |
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