View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8294A_low_120 (Length: 292)
Name: NF8294A_low_120
Description: NF8294A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8294A_low_120 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 45037785 - 45037513
Alignment:
| Q |
20 |
caaaaaacagctcagtttaagctgctgaaggtgctgtgacatattgaacacgacctacctcagacaatgcttgtacgaatggctcaatttcaacaccatt |
119 |
Q |
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| T |
45037785 |
caaaaaacagctcagtttaagctgctgaaggtgctgtgacatattgaacacgacctacctcagacaatgcttgtacgaatggctcaatttcaaaaccatt |
45037686 |
T |
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| Q |
120 |
cgtttgtacttcaccacttccactcaaattcttgttgtaatcaagagatgaatcattgtaaatatcccaccatttcttgactagcattcttatatcctcc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45037685 |
cgtttgtacttcaccacttccactcaaattcttgttgtaatcaagagatgaatcattgtaaatatcccaccatttcttgactagcattcttatatcctcc |
45037586 |
T |
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| Q |
220 |
ctttgcatgttttcttccttccctgtgtatctccaaggctttgatccctgaacaaaatcgaaaaatcaagtca |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45037585 |
ctttgcatgttttcttccttccctgtgtatctccaaggctttgatccctgaacaaaatcgaaaaatcaagtca |
45037513 |
T |
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