View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8294A_low_192 (Length: 255)
Name: NF8294A_low_192
Description: NF8294A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8294A_low_192 |
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Alignment Details
Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 63 - 247
Target Start/End: Original strand, 54074441 - 54074625
Alignment:
| Q |
63 |
ttttcactcatatagaacatatgaatatgaaaccttcttcaccatcagattccaatatttccattaacaattcaacaaaaacattcattagtagtccttg |
162 |
Q |
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| T |
54074441 |
ttttcactcatatagaaaatatgaatatgaaaccttcttcaccatcagattccaatatttccattaacaattcaacaacaacattcattagtagtccttg |
54074540 |
T |
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| Q |
163 |
ggaaaccatgcgacgaaaaccacgaacaaccctccttctttcattactttctattcttttatttgctgcattctctcttcatctc |
247 |
Q |
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| T |
54074541 |
ggaaaccatgcgacgaaaaccacgaacaaccctccttctttcattactttctattcttttatttgctgcattttctcttcatctc |
54074625 |
T |
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