View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8294A_low_236 (Length: 245)

Name: NF8294A_low_236
Description: NF8294A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8294A_low_236
NF8294A_low_236
[»] chr7 (30 HSPs)
chr7 (37-245)||(21681249-21681459)
chr7 (34-245)||(21627746-21627958)
chr7 (34-144)||(21740671-21740781)
chr7 (43-163)||(21704307-21704426)
chr7 (119-245)||(21991458-21991583)
chr7 (34-245)||(21689035-21689239)
chr7 (34-241)||(21713825-21714031)
chr7 (105-245)||(21622745-21622877)
chr7 (34-245)||(21791645-21791849)
chr7 (186-245)||(21791512-21791571)
chr7 (36-108)||(21651734-21651806)
chr7 (34-103)||(21784566-21784635)
chr7 (34-94)||(21663698-21663758)
chr7 (186-234)||(21663875-21663923)
chr7 (186-245)||(21788002-21788061)
chr7 (34-102)||(21725571-21725639)
chr7 (44-99)||(21784691-21784746)
chr7 (186-244)||(21651859-21651917)
chr7 (44-102)||(21771645-21771703)
chr7 (186-231)||(21704425-21704470)
chr7 (186-241)||(21639468-21639523)
chr7 (35-90)||(21991408-21991463)
chr7 (186-223)||(21771759-21771796)
chr7 (186-223)||(21785163-21785200)
chr7 (35-86)||(21622693-21622744)
chr7 (59-97)||(21787911-21787949)
chr7 (186-223)||(21725694-21725731)
chr7 (34-120)||(21639321-21639404)
chr7 (34-68)||(21791419-21791453)
chr7 (187-223)||(21740895-21740931)
[»] scaffold0182 (2 HSPs)
scaffold0182 (34-102)||(34209-34277)
scaffold0182 (186-223)||(34332-34369)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 6e-61; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 37 - 245
Target Start/End: Original strand, 21681249 - 21681459
Alignment:
Q  37 agcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaacaa 136  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||| |||||||| |||    
T  21681249 agcaaagatccaatttccatgaattttacttttcttgtccattgagtaaagtgatagacattatatagtttgttctgaggacaagttgctttagtagcaa 21681348  T
Q  137 agaggacaggtataaaaaatatattaaagtgaagtgtaaca--nnnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaa 234  Q
    |||||||||||||||||||| |||||||||||||||| | |          |||||||||||||||||||||||||| |||||||||||||||||||| |    
T  21681349 agaggacaggtataaaaaatctattaaagtgaagtgtgagattttttttttaagcaagcatatttacttatcttgtttattaggtaaaggtttgagagca 21681448  T
Q  235 tgaaaatctaa 245  Q
    |||||| ||||    
T  21681449 tgaaaaactaa 21681459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 34 - 245
Target Start/End: Original strand, 21627746 - 21627958
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 133  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |     
T  21627746 aaaagcaacgatcctatttccatgaattttacttttcttgtccgttgagtaaagtgatggacattatatagtttgttctgaggacaagttactttagcag 21627845  T
Q  134 caaagaggacaggtataaaaaatatattaaag-tgaagtgtaaca-nnnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgaga 231  Q
      |||||||||||||| ||||||  ||||||| |||||||||| |         |||||||||||||||||||||||| |||||||||||||||||||||    
T  21627846 tgaagaggacaggtat-aaaaattgattaaagttgaagtgtaagattttgttttaagcaagcatatttacttatcttgctcattaggtaaaggtttgaga 21627944  T
Q  232 gaatgaaaatctaa 245  Q
    | ||||||||||||    
T  21627945 gcatgaaaatctaa 21627958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 21740671 - 21740781
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  21740671 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagtgatggacattatatagtttgttatgaggacaagttactttagtaa 21740770  T
Q  134 caaagaggaca 144  Q
    |||||||||||    
T  21740771 caaagaggaca 21740781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 21704307 - 21704426
Alignment:
Q  43 gatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaacaaagagga 142  Q
    |||||| |||||  |||||||||||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  21704307 gatcctgtttccgagaattttacttttcttgtacattgagtaaagtgatggacattatata-tttgttctgaggacaagttactttagtaacaaagagga 21704405  T
Q  143 caggtataaaaaatatattaa 163  Q
    |||||||||||||||||||||    
T  21704406 caggtataaaaaatatattaa 21704426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 119 - 245
Target Start/End: Original strand, 21991458 - 21991583
Alignment:
Q  119 aagttactttagtaacaaagaggacaggtataaaaaatatattaaagtgaagtgtaacannnnnnngaagcaagcatatttacttatcttgttcattagg 218  Q
    ||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  21991458 aagttactttagtagtaaagaggacaagtataaaaaatctattaaagtgaagtgtaacattttttt-aagcaagcatatttacttatcttgttcattagg 21991556  T
Q  219 taaaggtttgagagaatgaaaatctaa 245  Q
    |||||||| ||||||||||||||||||    
T  21991557 taaaggttcgagagaatgaaaatctaa 21991583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 245
Target Start/End: Original strand, 21689035 - 21689239
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 133  Q
    ||||||||  |||| ||||||||||||||||||||||||  ||||||||| ||||  ||||| |    ||||| | || ||| |||||||||||||| |     
T  21689035 aaaagcaaatatcccttttccatgaattttacttttcttccccattgagttaagtggtggacgtg---tagttcgttccgagaacaagttactttagcag 21689131  T
Q  134 caaagaggacaggtataaaaaatatattaaagtg-aagtgtaacannnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgagag 232  Q
      |||||||||||||||||||  || |||||||| |||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  21689132 tgaagaggacaggtataaaaatcat-ttaaagtggaagtgtaatatttt----aagcaagcatatttacttatcttgttcattaggtaaaggtttgagag 21689226  T
Q  233 aatgaaaatctaa 245  Q
     ||||||||||||    
T  21689227 catgaaaatctaa 21689239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 21713825 - 21714031
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 133  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||   |||||   |||||||| | || |||||||||||||||||| |     
T  21713825 aaaagcaaagatcttttttccatgaattttacttttcttgtccattgagtaaagcggtggac---atatagttcgttccgaggacaagttactttagcag 21713921  T
Q  134 caaagaggacaggtataaaaaatatattaaagt-gaagtgta--acannnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgag 230  Q
      ||||||||| |||| |||||| ||||||||| ||| | ||  | |        ||| ||||| ||||||||| |||||||||||||||||||||||||    
T  21713922 tgaagaggacaagtat-aaaaatttattaaagtcgaaatttaagatagtttttttaagaaagcagatttacttaacttgttcattaggtaaaggtttgag 21714020  T
Q  231 agaatgaaaat 241  Q
    || ||||||||    
T  21714021 agcatgaaaat 21714031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 245
Target Start/End: Original strand, 21622745 - 21622877
Alignment:
Q  105 tttgctctgaggacaagttactttagtaacaaagaggacaggtataaaaaatatattaaagtgaagtgtaacannnnnnngaagcaagcatatttactta 204  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |        |||         |||||||    
T  21622745 tttgttctgaggacaagttactttagtaaaaaagaggacaggtataaaaaatctattaaagtgaagtgtgagatttttttaaag--------gttactta 21622836  T
Q  205 tcttgttcattaggtaaaggtttgagagaatgaaaatctaa 245  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  21622837 tcttgttcattaggtaaaggtttgagagcatgaaaatctaa 21622877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 245
Target Start/End: Original strand, 21791645 - 21791849
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaagttactttagtaa 133  Q
    ||||||||  |||| |||||||||||||||||||||||| |||||||||| || |  ||||| |    ||||| | || ||| |||||||||||||| |     
T  21791645 aaaagcaaatatcccttttccatgaattttacttttcttctccattgagttaactggtggacgtg---tagttcgttccgagaacaagttactttagcag 21791741  T
Q  134 caaagaggacaggtataaaaaatatattaaagtg-aagtgtaacannnnnnngaagcaagcatatttacttatcttgttcattaggtaaaggtttgagag 232  Q
      |||||||||||||||||||  | ||||||||| |||||||| |        |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  21791742 tgaagaggacaggtataaaaatca-attaaagtggaagtgtaatatttt----aagcaagcatatttacttatcttgttcagtaggtaaaggtttgaaag 21791836  T
Q  233 aatgaaaatctaa 245  Q
     ||||||||||||    
T  21791837 catgaaaatctaa 21791849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 21791512 - 21791571
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaa 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21791512 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagcatgaaaatctaa 21791571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 21651734 - 21651806
Alignment:
Q  36 aagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttg 108  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||||||||||    
T  21651734 aagcaaagatcctttttccatgaattttacatttcttgtccattgagtaaagtggtagacattatatagtttg 21651806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 21784566 - 21784635
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatata 103  Q
    ||||||||  ||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  21784566 aaaagcaaatatcctttttccgtgaattttacttttcttgtccaatgagtaaagtgatggacattatata 21784635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 21663698 - 21663758
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatgga 94  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||    
T  21663698 aaaagcaatgatcctatttccatgaattttacttttcttgtccattgagcaaagtgatgga 21663758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 21663875 - 21663923
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaa 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21663875 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaa 21663923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 21788002 - 21788061
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatctaa 245  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||    
T  21788002 aagcaagcatatttagttatcttgttcattaggtaaaggtttgagagcatgaaaaactaa 21788061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 21725571 - 21725639
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatat 102  Q
    ||||||||  ||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  21725571 aaaagcaaatatcctttttctgtgaattttacttttcttgtccaatgagtaaagtgatggacattatat 21725639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 21784691 - 21784746
Alignment:
Q  44 atcctttttccatgaattttacttttcttgtccattgagtaaagttatggacatta 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  21784691 atcctttttccgtgaattttacttttcttgtccattgagtaaagtgatgaacatta 21784746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 21651859 - 21651917
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaatcta 244  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||    
T  21651859 aagcaagcatatttacttatcttgttaattaggtaaaggtttgtgagcatggaaatcta 21651917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 21771645 - 21771703
Alignment:
Q  44 atcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatat 102  Q
    ||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  21771645 atcctttttctgtgaattttacttttcttgtccaatgagtaaagtgatggacattatat 21771703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 21704425 - 21704470
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaaggtttgaga 231  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  21704425 aagcaagcatatttagttatcttgttcattaggtaaaggtttgaga 21704470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 21639468 - 21639523
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaaggtttgagagaatgaaaat 241  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||    
T  21639468 aagcaagcatatttacttatcttgttcattaggtaaagtttcaagagcatgaaaat 21639523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 21991408 - 21991463
Alignment:
Q  35 aaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagtta 90  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  21991408 aaagcaaatatcctttttccatgaatttcacttttcttgtctattgagtaaagtta 21991463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 21771759 - 21771796
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaag 223  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21771759 aagcaagcatatttacttatcttgttcattaggtaaag 21771796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 21785163 - 21785200
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaag 223  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21785163 aagcaagcatatttacttatcttgttcattaggtaaag 21785200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 21622693 - 21622744
Alignment:
Q  35 aaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaa 86  Q
    ||||||| ||| || ||||||||||||||||||||||||||||| |||||||    
T  21622693 aaagcaaagatactatttccatgaattttacttttcttgtccatcgagtaaa 21622744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 21787911 - 21787949
Alignment:
Q  59 attttacttttcttgtccattgagtaaagttatggacat 97  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  21787911 attttacttttcttgtccattgagtaaagtgatggacat 21787949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 21725694 - 21725731
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaag 223  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  21725694 aagcacgcatatttacttatcttgttcattaggtaaag 21725731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 21639321 - 21639404
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatatagtttgctctgaggacaa 120  Q
    |||||||| |||||||||| ||| |||||||||| | |||| |||||||||||||  |||||   |||||||||| | |||||||||    
T  21639321 aaaagcaaagatccttttttcattaattttacttattttgtacattgagtaaagtggtggac---atatagtttgttatgaggacaa 21639404  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 21791419 - 21791453
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttt 68  Q
    |||||||| ||||||||||||||||||||||||||    
T  21791419 aaaagcaaagatcctttttccatgaattttacttt 21791453  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 21740895 - 21740931
Alignment:
Q  187 agcaagcatatttacttatcttgttcattaggtaaag 223  Q
    |||||||||||||||||||||| |||| |||||||||    
T  21740895 agcaagcatatttacttatcttcttcaataggtaaag 21740931  T

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Target: scaffold0182 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 34209 - 34277
Alignment:
Q  34 aaaagcaatgatcctttttccatgaattttacttttcttgtccattgagtaaagttatggacattatat 102  Q
    ||||||||  ||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  34209 aaaagcaaatatcctttttctgtgaattttacttttcttgtccaatgagtaaagtgatggacattatat 34277  T

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Target: scaffold0182; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 34332 - 34369
Alignment:
Q  186 aagcaagcatatttacttatcttgttcattaggtaaag 223  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34332 aagcacgcatatttacttatcttgttcattaggtaaag 34369  T

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