View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8294A_low_268 (Length: 239)
Name: NF8294A_low_268
Description: NF8294A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8294A_low_268 |
 | |
|
| [»] scaffold0022 (1 HSPs) |
| | |
|
| [»] scaffold0319 (1 HSPs) |
| | |
|
| [»] scaffold0016 (2 HSPs) |
| | |
|
| [»] scaffold0130 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
| | |
|
| [»] scaffold0108 (1 HSPs) |
| | |
|
| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0107 (1 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 1735317 - 1735501
Alignment:
| Q |
42 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggaga |
141 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
1735317 |
cagaaagctgtgttcgagatggttaagaagccagcaacagaacgaatttcacccccattgtcaattctgaagaaagatcattcaaaagaagacgaggaga |
1735416 |
T |
|
| Q |
142 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatgatgtcca |
226 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1735417 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtctgtaatgtggtttccatcttgcctgtggaatacgatgtcca |
1735501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 17423032 - 17422845
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||| ||||||| |
|
|
| T |
17423032 |
aagcagaaagaggtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaatcttgaagaaagatcatcccaaagaggatgagg |
17422933 |
T |
|
| Q |
139 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatgatgtcca |
226 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| || || ||||||||||||||||||||||| ||| | ||||||||||| |||||||| |
|
|
| T |
17422932 |
agatgacttcgaatttcacgggatctgacccgagcctcgacatagtttgcaatgtggtttctatcctacctgtggaatacgatgtcca |
17422845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 36 - 217
Target Start/End: Complemental strand, 22348945 - 22348764
Alignment:
| Q |
36 |
ggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatg |
135 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||| |||| |||| |||||||||||||||||| | |||||||||||| ||||||| |||| |
|
|
| T |
22348945 |
ggcaagcagaaagttgtgttcgaaatggttaaaaaaccagcaatagagagaatctcacccccattgtcaattttaaagaaagatcatcccaaagaggatg |
22348846 |
T |
|
| Q |
136 |
aggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
| || |||||||||||||||| | ||||||||| |||||||| || || |||||||||||||| ||| | |||||| |||| |
|
|
| T |
22348845 |
aagaaatgacttcaaatttcattggatctgaccccagtcttgatatcgtatgcaatgtggtttcgatcctacctgtgaaata |
22348764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 139; Significance: 7e-73; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 28 - 226
Target Start/End: Complemental strand, 14693415 - 14693217
Alignment:
| Q |
28 |
aaacagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaa |
127 |
Q |
| |
|
|||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
14693415 |
aaacggaggacaagcagaaagccgtgttcgaaatggttaaaaaaccagcaacagagagaatttcacccccattgtcaatcttgaagaaagaccattccaa |
14693316 |
T |
|
| Q |
128 |
agaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatgatgtcca |
226 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
14693315 |
agaggataaggagatgacttcaaatttcacggaatctgacccaaacctcgacatagtttgcaatgtggtttctatcttgcctgtggaatacgatgtcca |
14693217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 33 - 226
Target Start/End: Original strand, 10782167 - 10782360
Alignment:
| Q |
33 |
gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaag |
132 |
Q |
| |
|
|||| |||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||||| | ||||||| |
|
|
| T |
10782167 |
gaggacaagcagaaagctgtgtttgagatggttaagaagccagcaacagagcgaatttcgcccccattgtcgattctgatgaaagatcatccaaaagaag |
10782266 |
T |
|
| Q |
133 |
atgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatgatgtcca |
226 |
Q |
| |
|
||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10782267 |
atgaggaaatgacttcgaatttcacagaatctgacccaagtcttgacatagtttgtaatgtggtttccattttgcctgtggaatatgatgtcca |
10782360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 7402161 - 7401977
Alignment:
| Q |
42 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggaga |
141 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| || ||||||||| |||||||||| |
|
|
| T |
7402161 |
cagaaagctgtgttcgaaatggttaagaaggcagcaacagaaagaatttcacccccattgtcaattttgaagaagtattgttccaaagaggatgaggaga |
7402062 |
T |
|
| Q |
142 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatgatgtcca |
226 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||| |||||| |||||| |||||||| |
|
|
| T |
7402061 |
tgacttcaaatttcacggaatgtgacccgagtctcgacatagtttgcaatgtggtttcaatcctgcctgaggaatacgatgtcca |
7401977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 39 - 223
Target Start/End: Complemental strand, 13307054 - 13306870
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||| ||||| | |
|
|
| T |
13307054 |
aagcagaaaactgtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaattttgaagaaagatcatcccaaagaggatgaag |
13306955 |
T |
|
| Q |
139 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatgatgt |
223 |
Q |
| |
|
| |||||||| |||||||||| ||||||||| ||||| || |||||||||||||||||||| ||| | || |||||||| ||||| |
|
|
| T |
13306954 |
atatgacttcgaatttcacgggatctgaccctagtctcgatatagtttgcaatgtggtttctatcctaccggtggaatacgatgt |
13306870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 10150797 - 10150985
Alignment:
| Q |
32 |
agagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaa |
131 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
10150797 |
agagggcaagcgaaaagatgtgttcgaaatggttaaaaaaccagtcacagagagaatctcacccccattgtcaattttgaagaaagatcatcccaaagag |
10150896 |
T |
|
| Q |
132 |
gatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatga |
220 |
Q |
| |
|
||||| || ||||||||||||||||| | ||||||||| |||||||||||||| |||||||||||||| || | |||||||||||||| |
|
|
| T |
10150897 |
gatgaagaaatgacttcaaatttcactggatctgaccccagtcttgacatagtatgcaatgtggtttctatactacctgtggaatatga |
10150985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 14342834 - 14342647
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| |
|
|
| T |
14342834 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacaaaaagaatttcacccccattgtcaattttgaagaaagattgttccaaagaggatgagg |
14342735 |
T |
|
| Q |
139 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatgatgtcca |
226 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||| ||||||||||||| |||||||| |
|
|
| T |
14342734 |
agatgacttcaaatttcacggaatctgacccgagcctcgacatagtttgcaatgtggtttcaatcctgcctgtggaatacgatgtcca |
14342647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 33 - 174
Target Start/End: Complemental strand, 18133719 - 18133578
Alignment:
| Q |
33 |
gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaag |
132 |
Q |
| |
|
||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18133719 |
gagggcaagcaaaaagttgtgttcgagatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcgttccaaagaag |
18133620 |
T |
|
| Q |
133 |
atgaggagatgacttcaaatttcacggaatctgacccaagtc |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18133619 |
atgaggagatgacttcaaatttcacggaatctgacccaagtc |
18133578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 18171819 - 18171652
Alignment:
| Q |
32 |
agagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaa |
131 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||||||||| |||| || |
|
|
| T |
18171819 |
agagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagaaagaatttcgcccccattgtcaatcttgaagaaagatcatcccaaggag |
18171720 |
T |
|
| Q |
132 |
gatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
199 |
Q |
| |
|
||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| | |||||||||||| |
|
|
| T |
18171719 |
gatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtacaatgtggtttc |
18171652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 28 - 220
Target Start/End: Original strand, 11366 - 11558
Alignment:
| Q |
28 |
aaacagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaa |
127 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||| | |||||||||||| |||| |
|
|
| T |
11366 |
aaacagagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagagagaatctcgcccccattgtcaattttaaagaaagatcatcccaa |
11465 |
T |
|
| Q |
128 |
agaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatga |
220 |
Q |
| |
|
||| ||||| || ||||||||||||||||| ||||||||||| ||||| ||||||| |||||||||||||| ||| | ||| |||||||||| |
|
|
| T |
11466 |
agaggatgaagaaatgacttcaaatttcactgaatctgaccctagtctcaacatagtatgcaatgtggtttctatcctacctatggaatatga |
11558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 22638323 - 22638512
Alignment:
| Q |
28 |
aaacagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaa |
127 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
22638323 |
aaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaa |
22638422 |
T |
|
| Q |
128 |
agaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
||| ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| |||||||||||||| ||| | || |||||||| |
|
|
| T |
22638423 |
agaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctaccggtggaata |
22638512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 23200818 - 23200629
Alignment:
| Q |
28 |
aaacagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaa |
127 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
23200818 |
aaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaa |
23200719 |
T |
|
| Q |
128 |
agaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
||| ||||| || |||||||| |||||||||| ||||||||| ||||| || ||||| |||||||||||||| ||| | || |||||||| |
|
|
| T |
23200718 |
agaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctaccggtggaata |
23200629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 23626447 - 23626258
Alignment:
| Q |
28 |
aaacagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaa |
127 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| || |||||||||||||| |||| ||||||||| |||| |
|
|
| T |
23626447 |
aaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaatattgaaaaaagatcatcccaa |
23626348 |
T |
|
| Q |
128 |
agaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
|| |||| || |||||||| |||||||| | ||||||||| ||||| |||||||| |||||||||||||| ||| | || |||||||| |
|
|
| T |
23626347 |
ggaggatgtagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttctatcctaccggtggaata |
23626258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 39 - 196
Target Start/End: Original strand, 24911914 - 24912070
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
||||||| |||||| |||||||||||||| |||||||||||| || ||||||||||||| |||||||| | ||||| || ||| ||||||| ||||| | |
|
|
| T |
24911914 |
aagcagagagctgttttcgaaatggttaaaaaaccagcaacaaagagaatttcaccccc-ttgtcaatcttaaagaaggaccatcccaaagaggatgaag |
24912012 |
T |
|
| Q |
139 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
196 |
Q |
| |
|
| ||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
24912013 |
aaatgacttcaaatttcactggatctgaccccagtctcgacatagtatgcaatgtggt |
24912070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 9649 - 9834
Alignment:
| Q |
32 |
agagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaa |
131 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||| | |||||||| ||| ||||||| |
|
|
| T |
9649 |
agagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattttaaagaaagaacatcccaaagag |
9748 |
T |
|
| Q |
132 |
gatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
||||| || ||||||||||||||||| | ||||||||| ||||| |||||||| |||||||||||||| ||| | ||||||||||| |
|
|
| T |
9749 |
gatgaagaaatgacttcaaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacctgtggaata |
9834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 126748 - 126559
Alignment:
| Q |
28 |
aaacagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaa |
127 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
126748 |
aaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaa |
126649 |
T |
|
| Q |
128 |
agaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
||| ||||| || |||||||| |||||||| | ||||||||| ||||| || ||||| |||||||||||||| ||| | || |||||||| |
|
|
| T |
126648 |
agaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgatatagtgtgcaatgtggtttctatcctaccggtggaata |
126559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 179447 - 179311
Alignment:
| Q |
60 |
atggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacgg |
159 |
Q |
| |
|
|||||||| ||| |||| ||||| |||| || || || ||||||||| |||||||||| ||| | ||||| ||||| || ||||| || |||||| | |
|
|
| T |
179447 |
atggttaaaaaatcagccacagaaagaatctcccctcctttgtcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcgaatttctcca |
179348 |
T |
|
| Q |
160 |
aatctgacccaagtcttgacatagtttgcaatgtggt |
196 |
Q |
| |
|
| ||||||||||| | || ||||| ||||||||||| |
|
|
| T |
179347 |
agtctgacccaagcttcgatatagtgtgcaatgtggt |
179311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 43150 - 43321
Alignment:
| Q |
28 |
aaacagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaa |
127 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
43150 |
aaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaa |
43249 |
T |
|
| Q |
128 |
agaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
199 |
Q |
| |
|
|| ||||| || ||||||| |||||||||| ||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
43250 |
ggaggatgaagaactgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttc |
43321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 102; Significance: 9e-51; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 23435110 - 23435287
Alignment:
| Q |
28 |
aaacagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaa |
127 |
Q |
| |
|
|||||||||| |||||||| | ||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
23435110 |
aaacagagggtaagcagaaggttgtgttcgaaatggttaagaaaccagcaatagagagaatctcgcccccattgtcaattttgaagaaagatcatcccaa |
23435209 |
T |
|
| Q |
128 |
agaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatctt |
205 |
Q |
| |
|
|| ||||| || |||||||| |||||||||| ||||||||| ||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
23435210 |
ggaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttctatctt |
23435287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 19035363 - 19035178
Alignment:
| Q |
32 |
agagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaa |
131 |
Q |
| |
|
|||||||||||| |||||| |||||||||| ||||| ||||||||||||||| |||| ||| | |||||||||||| |||||||| || || ||||| | |
|
|
| T |
19035363 |
agagggcaagcaaaaagctatgttcgaaatagttaaaaaaccagcaacagagagaatctcatctccattgtcaattttgaagaaaaataatcccaaaaag |
19035264 |
T |
|
| Q |
132 |
gatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
||||| || |||||||| |||||||| | ||||||||| |||||||| || | ||||||||||| || ||| | ||||||||||| |
|
|
| T |
19035263 |
gatgaagaaatgacttcgaatttcactggatctgaccccagtcttgatattatatgcaatgtggtctcgatcctacctgtggaata |
19035178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 13289552 - 13289364
Alignment:
| Q |
32 |
agagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaa |
131 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| || |||||||||||| |||| || ||||||||||||||| | |||||||||||| ||||||| |
|
|
| T |
13289552 |
agagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcgcccccattgtcaattttaaagaaagatcatcccaaagag |
13289453 |
T |
|
| Q |
132 |
gatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatga |
220 |
Q |
| |
|
||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| |||||||||||||| ||| | ||| |||||||||| |
|
|
| T |
13289452 |
gatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacctttggaatatga |
13289364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 42 - 217
Target Start/End: Complemental strand, 14772742 - 14772567
Alignment:
| Q |
42 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggaga |
141 |
Q |
| |
|
|||| |||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||| ||||||| ||||| || | |
|
|
| T |
14772742 |
cagagagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaa |
14772643 |
T |
|
| Q |
142 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
|||||||||||||||| | ||||||||| ||||| || ||||| ||||||||||| || ||| | ||||||||||| |
|
|
| T |
14772642 |
tgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcgatcctacctgtggaata |
14772567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 42 - 217
Target Start/End: Original strand, 11493 - 11668
Alignment:
| Q |
42 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggaga |
141 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||||||| | |||||||||||| ||||||| ||||| || | |
|
|
| T |
11493 |
cagaaagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattataaagaaagatcatcccaaagaggatgaagaaa |
11592 |
T |
|
| Q |
142 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
|||||||||||||||| | ||||||||| |||||||| || || ||||||||||| || ||| | ||||||||||| |
|
|
| T |
11593 |
tgacttcaaatttcactggatctgaccccagtcttgatatcgtatgcaatgtggtctcaatcctacctgtggaata |
11668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 126943 - 126760
Alignment:
| Q |
34 |
agggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaaga |
133 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||| |||||| |||||||| |||| ||||||||||||| |||| | |||||||||||| |||| || || |
|
|
| T |
126943 |
agggaaagcagaaagcggtgttcgaaatggttaaaaaaccaacaacagagagaatctcacccccattgtgaattttaaagaaagatcatcccaatgagga |
126844 |
T |
|
| Q |
134 |
tgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
||| || ||||||||||||||||||| ||||||||| |||||||| || || ||||||||||| || ||| | ||||||||||| |
|
|
| T |
126843 |
tgaagaaatgacttcaaatttcacgggatctgaccccagtcttgatatcgtatgcaatgtggtctcgatcctacctgtggaata |
126760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 39 - 217
Target Start/End: Original strand, 21511006 - 21511184
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| | |||||||||||| |||| || ||||| | |
|
|
| T |
21511006 |
aagcagaaagcggtgttcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattttaaagaaagatcatcccaaggaggatgaag |
21511105 |
T |
|
| Q |
139 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
| ||||||||||||||||| | ||||||||| |||||||| || | ||||||||||| || ||||| | ||||||||| |
|
|
| T |
21511106 |
aaatgacttcaaatttcactggatctgaccccagtcttgatatcatatgcaatgtggtctcgatcttacttgtggaata |
21511184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 22806016 - 22805838
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
||||||| |||||| || ||||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||| ||||||| ||||| | |
|
|
| T |
22806016 |
aagcagagagctgtatttgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaag |
22805917 |
T |
|
| Q |
139 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
| ||||||||||||||||| | ||||||||| | ||| || ||||| ||||||||||| || ||| | ||||||||||| |
|
|
| T |
22805916 |
aaatgacttcaaatttcactggatctgaccccaatctcgatatagtatgcaatgtggtctcaatcctacctgtggaata |
22805838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 41380507 - 41380414
Alignment:
| Q |
33 |
gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattcca |
126 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
41380507 |
gagggcaagcagaaagctgtgttcgagatggttaagaagccagcaacagagcgaatttcacccccattgtcaattttgaagaaagatcattcca |
41380414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 42 - 220
Target Start/End: Original strand, 26227 - 26405
Alignment:
| Q |
42 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggaga |
141 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||| |||||||||| | ||| || ||||| |||| |
|
|
| T |
26227 |
cagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattttgaagaaagactctctcaaggaggatgaagaga |
26326 |
T |
|
| Q |
142 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatga |
220 |
Q |
| |
|
||||||| |||||||| | ||||||||| ||||| |||||||| ||||| ||||| |||||| | |||||||||||||| |
|
|
| T |
26327 |
tgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaacgtggtgtccatcctacctgtggaatatga |
26405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 67003 - 67163
Alignment:
| Q |
57 |
gaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttca |
156 |
Q |
| |
|
||||||||| | ||||||||||||||| |||| |||||||||||||||||||| |||||||||||| ||||||| ||||| || |||||||||||||||| |
|
|
| T |
67003 |
gaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttca |
67102 |
T |
|
| Q |
157 |
cggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
| | ||||||||| ||||| || ||||| ||||||||||| || ||| | ||||||||||| |
|
|
| T |
67103 |
ctggatctgaccccagtctcgatatagtatgcaatgtggtctcaatcctacctgtggaata |
67163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 34 - 217
Target Start/End: Original strand, 29633 - 29816
Alignment:
| Q |
34 |
agggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaaga |
133 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| |||||||| | |||| |||| |||||||| ||||||||| |||||||||||||| ||||||| || |
|
|
| T |
29633 |
agggcaagcaaaaagatgtgttcgaaatggttaaaaaaccagccatagagagaatctcacccccgttgtcaattttgaagaaagatcatcccaaagagga |
29732 |
T |
|
| Q |
134 |
tgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
||| || ||||| ||| ||||||| | ||||||||| || || |||||||| |||||||||||||| ||| | || |||||||| |
|
|
| T |
29733 |
tgaagaaatgacctcagatttcaccggatctgaccccagcctagacatagtatgcaatgtggtttctatcctaccagtggaata |
29816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 5716 - 5538
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
||||||| || ||| || ||||||||| | ||||||||||||||| |||| |||||||||||||||||||| |||||||||||| ||||||| ||||| | |
|
|
| T |
5716 |
aagcagagagttgtatttgaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattctaaagaaagatcatcccaaagaggatgaag |
5617 |
T |
|
| Q |
139 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
| ||||||||||||||||| | ||||||||| ||||| || ||||| ||||||||||| || || | ||||||||||| |
|
|
| T |
5616 |
aaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcaattctacctgtggaata |
5538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 42 - 220
Target Start/End: Complemental strand, 37768 - 37590
Alignment:
| Q |
42 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggaga |
141 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||| |||||||||| | |||| || ||||| || | |
|
|
| T |
37768 |
cagaaagctgtgttcgaaatggttaaaaagccagcaacatagagaatttcacccccattgtcaattttgaagaaagactttcccaaggaggatgaagata |
37669 |
T |
|
| Q |
142 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatga |
220 |
Q |
| |
|
||||||| |||||||| | ||||||||| ||||| |||||||| || || ||||| || ||| | |||||||||||||| |
|
|
| T |
37668 |
tgacttcgaatttcactggatctgaccctagtctcgacatagtatgtaacgtggtgtctatcctacctgtggaatatga |
37590 |
T |
|
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Target: scaffold0026 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 139151 - 138973
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
||||||| |||||| |||||||||||||| |||||||||||| || | || ||||| || |||||||| | |||||||| ||| ||||||| ||||| | |
|
|
| T |
139151 |
aagcagagagctgtattcgaaatggttaaaaaaccagcaacaaagaggatctcacctcccttgtcaatcttaaagaaagaccatcccaaagaggatgaag |
139052 |
T |
|
| Q |
139 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
| |||||||| |||||||| | |||||||| ||||| |||||||| |||||||||||||| ||| | ||||| ||||| |
|
|
| T |
139051 |
aaatgacttcgaatttcactgggtctgaccctagtctcgacatagtatgcaatgtggtttcaatcctacctgtagaata |
138973 |
T |
|
Back To:
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Target: scaffold0023 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 65268 - 65376
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||||| |||| | |||||||||||||||| | |||||||||||| ||||||| ||||| | |
|
|
| T |
65268 |
aagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaag |
65367 |
T |
|
| Q |
139 |
agatgactt |
147 |
Q |
| |
|
| ||||||| |
|
|
| T |
65368 |
aaatgactt |
65376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 74446 - 74554
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||||| |||| | |||||||||||||||| | |||||||||||| ||||||| ||||| | |
|
|
| T |
74446 |
aagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattttaaagaaagatcatcccaaagaggatgaag |
74545 |
T |
|
| Q |
139 |
agatgactt |
147 |
Q |
| |
|
| ||||||| |
|
|
| T |
74546 |
aaatgactt |
74554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 217
Target Start/End: Original strand, 5065 - 5235
Alignment:
| Q |
47 |
agctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgact |
146 |
Q |
| |
|
|||||| |||||||||||||| || |||||||||||| |||| |||||||| |||||||| | |||||||| ||| |||| || ||||| || |||||| |
|
|
| T |
5065 |
agctgttttcgaaatggttaaaaagccagcaacagagagaatctcaccccccttgtcaatcttaaagaaagaccatcccaaggaggatgaagaaatgact |
5164 |
T |
|
| Q |
147 |
tcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
|| |||||||| | |||||||| ||||| |||||||| ||||||||||| || || | ||||||||||| |
|
|
| T |
5165 |
tcgaatttcactggatctgacctcagtctcgacatagtatgcaatgtggtatcaattctacctgtggaata |
5235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 159243 - 159086
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
||||||||||| || || ||||||||||| || ||||||||||| |||| ||||| || || ||||| |||||||| | ||| |||| || ||||| | |
|
|
| T |
159243 |
aagcagaaagccgtttttgaaatggttaaaaagccagcaacagaaagaatctcaccgcccttatcaatcttgaagaaaaaccatcccaaggaggatgaag |
159144 |
T |
|
| Q |
139 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
196 |
Q |
| |
|
| |||||||| |||||||| | ||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
159143 |
aaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggt |
159086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 1874 - 1992
Alignment:
| Q |
39 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
138 |
Q |
| |
|
||||||| |||||| |||||||||||||| ||||||||||||||| |||| |||||||| |||||||| | |||||||| ||| |||| | ||||| | |
|
|
| T |
1874 |
aagcagagagctgttttcgaaatggttaaaaaaccagcaacagagagaatctcaccccccttgtcaatcttaaagaaagaccatcccaagtaggatgaag |
1973 |
T |
|
| Q |
139 |
agatgacttcaaatttcac |
157 |
Q |
| |
|
| |||||||| |||||||| |
|
|
| T |
1974 |
aaatgacttcgaatttcac |
1992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 33613 - 33748
Alignment:
| Q |
88 |
tttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttg |
187 |
Q |
| |
|
||||||| || || ||||| |||||||||| ||| ||||||| ||||| || |||||||| ||||||| | ||||||||| ||||| |||||||| || |
|
|
| T |
33613 |
tttcacctcccttatcaatcttgaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcattggatctgaccccagtctcgacatagtgtg |
33712 |
T |
|
| Q |
188 |
caatgtggtttccatcttgcctgtggaatatgatgt |
223 |
Q |
| |
|
||||||||| || | |||||||||||||| ||||| |
|
|
| T |
33713 |
caatgtggtgtcagttttgcctgtggaatacgatgt |
33748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 196
Target Start/End: Original strand, 75405 - 75541
Alignment:
| Q |
60 |
atggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacgg |
159 |
Q |
| |
|
|||||||| |||||||| || || |||| || || || || |||||| |||||||||| ||| | ||||| ||||| || ||||| ||||||||||| | |
|
|
| T |
75405 |
atggttaaaaaaccagccacggaaagaatctcccctcctttatcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcaaatttcacag |
75504 |
T |
|
| Q |
160 |
aatctgacccaagtcttgacatagtttgcaatgtggt |
196 |
Q |
| |
|
|||||||| ||||||| || ||||| ||||||||||| |
|
|
| T |
75505 |
aatctgactcaagtctcgatatagtatgcaatgtggt |
75541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 83876 - 83970
Alignment:
| Q |
102 |
tcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
196 |
Q |
| |
|
|||||| |||||||||| ||| | ||||| ||||| | ||||| ||||||||||| ||||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
83876 |
tcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt |
83970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 121548 - 121642
Alignment:
| Q |
102 |
tcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
196 |
Q |
| |
|
|||||| |||||||||| ||| | ||||| ||||| | ||||| ||||||||||| ||||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
121548 |
tcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt |
121642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 148842 - 148924
Alignment:
| Q |
141 |
atgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaatatgatgt |
223 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||| || ||||| ||||||||||| || || |||| ||| ||||||||||| |
|
|
| T |
148842 |
atgacgtcaaatttcacaaaatctgacccaagtctcgatatagtatgcaatgtggtatcaatattgcatgttgaatatgatgt |
148924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 14463 - 14634
Alignment:
| Q |
46 |
aagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgac |
145 |
Q |
| |
|
||||||| |||||||||||||| |||||||| || || |||| || || || || |||||| |||||| ||||||| | || || ||||| || ||||| |
|
|
| T |
14463 |
aagctgttttcgaaatggttaaaaaaccagccacggaaagaatctcccctcccttatcaattttgaagagagatcatcctaaggaggatgaagaaatgac |
14562 |
T |
|
| Q |
146 |
ttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtggaata |
217 |
Q |
| |
|
||| |||||||| | |||| |||| ||||| || ||| | |||||||| || || | |||||||||||||| |
|
|
| T |
14563 |
ttcgaatttcactggatctaaccccagtctcgatataatatgcaatgtcgtgtcagttttgcctgtggaata |
14634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 42379 - 42256
Alignment:
| Q |
102 |
tcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttcca |
201 |
Q |
| |
|
|||||| |||||||| ||||| | || || ||||| || ||||| || |||||||| |||||||| |||||||| || ||||| ||||||||||| | |
|
|
| T |
42379 |
tcaattttgaagaaaaatcatcctaaggaggatgaagaaatgacgtcgaatttcactgaatctgatccaagtctcgatatagtgtgcaatgtggtgttag |
42280 |
T |
|
| Q |
202 |
tcttgcctgtggaatatgatgtcc |
225 |
Q |
| |
|
| |||||||| ||||| ||||||| |
|
|
| T |
42279 |
ttttgcctgttgaatacgatgtcc |
42256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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