View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8294A_low_363 (Length: 220)
Name: NF8294A_low_363
Description: NF8294A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8294A_low_363 |
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Alignment Details
Target: chr3 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 33246068 - 33246228
Alignment:
| Q |
40 |
aaccattaactgattctgaaaagggttcatctgaaagttattagaaaacgagttttcagcattgaaagtgaaaaactcttgacgctgttgatgaacagaa |
139 |
Q |
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| T |
33246068 |
aaccattaactgattctgaaaagggttcatctgaaagttattagaaaacgagttttcagcattgaaagtgaaaaactcttgacgctgttgatgaacagaa |
33246167 |
T |
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| Q |
140 |
gaagaagtaacagaaaaataagaactcgacaccgccgtcatcggagtaggaagcatgatct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33246168 |
gaagaagtaacagaaaaataagaactcgacaccgccgtcatcggagtaggaagcatgatct |
33246228 |
T |
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