View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8294A_low_410 (Length: 201)
Name: NF8294A_low_410
Description: NF8294A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8294A_low_410 |
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Alignment Details
Target: chr5 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 11696962 - 11696800
Alignment:
| Q |
17 |
acatcatctggtgccaaaccttcttcaatcatttctgagaaaactttaagagcttccttaccacgtccatgaatcgcaagaccagatatcattacagtgt |
116 |
Q |
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| T |
11696962 |
acatcatctggtgccaaaccttcttcaatcatttctgagaaaactttaagagcttccttaccacgtccatgaatcgcaagaccagatatcattacagtgt |
11696863 |
T |
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| Q |
117 |
aagaaaatctattcttctccgacatattctcgaatacgcgtaaacctttctcaagacatccac |
179 |
Q |
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| T |
11696862 |
aagaatatctattcttctccgacatatttttgaatacgcgtaaacctttctcaagacatccac |
11696800 |
T |
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