View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8295_low_4 (Length: 285)
Name: NF8295_low_4
Description: NF8295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8295_low_4 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 20 - 285
Target Start/End: Original strand, 2749036 - 2749303
Alignment:
| Q |
20 |
tgaagtaccaaaatactttgtggaatggtgaaagttatgtaaaaatagtcacttggatacactagactcaatcaagaacac--gagcacagttgaaggag |
117 |
Q |
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| T |
2749036 |
tgaagtaccaaaatactttgtggaatggtgtaagttatgtaaaaacaatcactcggatacactagactcaatcaagaacacaagagcacagttgaaggag |
2749135 |
T |
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| Q |
118 |
gaaaggaagaaaacaccatatctaacaagagtgtggaaaaggtacattttaaacttagtttaattatagtttattgtgagaacaagaagtaggattaatg |
217 |
Q |
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| T |
2749136 |
gaaaggaagaaaacaccatatctaacaagagtgtggaaaaggtacattttaaacttagtttaattatagtttattgtgaggacaagaagtaggattaatg |
2749235 |
T |
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| Q |
218 |
acgtgttaaggaatataaactaagaaaaattagacaagttctgaaaattgtgttgatttttcagtttt |
285 |
Q |
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| T |
2749236 |
acgtgttaaggaatataaactaagaaaaatttgacaagttctgaaaattgtgttgatttttcagtttt |
2749303 |
T |
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