View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8296_high_11 (Length: 230)
Name: NF8296_high_11
Description: NF8296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8296_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 28 - 215
Target Start/End: Complemental strand, 41592352 - 41592165
Alignment:
| Q |
28 |
aaatttgattaattgttagatttaattttcaaaagatatgagagcagagaaaacacagatcagatatagagaaatgaatatttgccatggtcaccaacag |
127 |
Q |
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| T |
41592352 |
aaatttgattaattgttagatttaattttcaaaagatatgagagcagagaaaacacagatcagatacagagaaatgaatatctgccatggtcaccaacag |
41592253 |
T |
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| Q |
128 |
agccatgttcacacctgatgtgtcaccacgctgcacacacgtgaacgttgtagcggagccttaagaatatccatcactcggacacaca |
215 |
Q |
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| T |
41592252 |
agccatgttcacacctgatgtgtcaccacgctgcacacacgtgaacgttgtagctgagccttaagaatatccatcactcggacacaca |
41592165 |
T |
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