View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8299_low_3 (Length: 640)

Name: NF8299_low_3
Description: NF8299
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8299_low_3
NF8299_low_3
[»] chr8 (2 HSPs)
chr8 (95-478)||(19885313-19885687)
chr8 (268-455)||(19885148-19885334)
[»] chr6 (8 HSPs)
chr6 (95-478)||(32811129-32811503)
chr6 (180-478)||(24238151-24238439)
chr6 (101-178)||(24230163-24230240)
chr6 (268-455)||(24229992-24230178)
chr6 (377-455)||(32811482-32811560)
chr6 (15-84)||(24229832-24229901)
chr6 (18-101)||(24229683-24229766)
chr6 (139-201)||(24229799-24229861)
[»] chr7 (6 HSPs)
chr7 (95-472)||(11495095-11495461)
chr7 (268-445)||(11495450-11495626)
chr7 (15-84)||(11495801-11495870)
chr7 (15-83)||(11495701-11495769)
chr7 (345-405)||(10529146-10529206)
chr7 (36-103)||(11495931-11495998)
[»] chr1 (5 HSPs)
chr1 (269-473)||(544326-544530)
chr1 (15-99)||(29490581-29490665)
chr1 (18-103)||(29490729-29490815)
chr1 (139-186)||(544672-544719)
chr1 (139-178)||(29490527-29490566)
[»] scaffold0684 (2 HSPs)
scaffold0684 (156-206)||(7390-7440)
scaffold0684 (345-408)||(7619-7682)


Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-128; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 95 - 478
Target Start/End: Original strand, 19885313 - 19885687
Alignment:
Q  95 ttaatctgattggatttgttcatgtttattaatctgatttgatctttttgttgacattagaattagtagaaaatgatatgaaatgataatatgaattgtg 194  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||    
T  19885313 ttaatttgattggatttgttcatgtttattaatctgatttgatctttttcttgacattagaattagtagaaaatgatatgaagtaataatatgaattgtg 19885412  T
Q  195 atgtttatgttttactgaatgagtgtaagaatgtgaattttgaactaatttcaagnnnnnnnnnnnnnnnnnngttggtttatttgtggatgatttatct 294  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||    
T  19885413 atgtttatgttttgctgaatgagaataagaatgtgaattttgaactaatttcaagttttttttt---------gttggtttatttgtggatgatttatct 19885503  T
Q  295 accggtacttcactgagcatttgccttcacttttggcatctctcgcgatccaggtttgttcacattgccgtgtttattaagtatctcatgttgctgcatt 394  Q
    |||| | ||||||||||||||||| ||||||||  | ||||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||    
T  19885504 accgattcttcactgagcatttgcgttcactttccgtatctctcgcgatccaggtttgttaactttgtcgtgtttattaagtatcccatgttgctgcatt 19885603  T
Q  395 ttgattagtttggtcaccataaaaatgttgttgaatattttaatttgattgaattcgttcacgtgtatcgattgtggtattgaa 478  Q
    || ||| | ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19885604 ttaatttgattggttaccataaaattgttgttgaatattttaatttgattgaatccgttcacgtgtatcgattgtggtattgaa 19885687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 268 - 455
Target Start/End: Original strand, 19885148 - 19885334
Alignment:
Q  268 gttggtttatttgtggatgatttatctaccggtacttcactgagcatttgccttcacttttggcatctctcgcgatccaggtttgttcacattgccgtg- 366  Q
    ||||||| ||||||||||||||||||| ||||| ||||  ||||||||||  || |||||  | ||||||||  |  ||||||||| |||  ||  ||      
T  19885148 gttggttaatttgtggatgatttatctgccggttcttcgatgagcatttgagttgactttctgtatctctcg--aatcaggtttgtgcactctgttgtca 19885245  T
Q  367 tttattaagtatctcatgttgctgcattttgattagtttggtcaccataaaaatgttgttgaatattttaatttgattgaattcgttca 455  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| |||||    
T  19885246 tttattaagtatcccatgttgctgaattttgattagtttggttaccataaaaatgttgttgaatgttttaatttgattggatttgttca 19885334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 221; Significance: 1e-121; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 95 - 478
Target Start/End: Complemental strand, 32811503 - 32811129
Alignment:
Q  95 ttaatctgattggatttgttcatgtttattaatctgatttgatctttttgttgacattagaattagtagaaaatgatatgaaatgataatatgaattgtg 194  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||    
T  32811503 ttaatttgattggatttgttcatgtttattaatctgatttgatctttttcttgacattagaattagtagaaaatgatatgaagtaataatatgaattgtg 32811404  T
Q  195 atgtttatgttttactgaatgagtgtaagaatgtgaattttgaactaatttcaagnnnnnnnnnnnnnnnnnngttggtttatttgtggatgatttatct 294  Q
    ||||||| ||||| |||||||||  ||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||    
T  32811403 atgtttaagttttgctgaatgagaataagaatgtgaattttgaactaatttcaagttttttttt---------gttggtttatttgtggatgatttatct 32811313  T
Q  295 accggtacttcactgagcatttgccttcacttttggcatctctcgcgatccaggtttgttcacattgccgtgtttattaagtatctcatgttgctgcatt 394  Q
    |||| | ||||||||||||||||| ||||||||  | ||||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||    
T  32811312 accgattcttcactgagcatttgcgttcactttccgtatctctcgcgatccaggtttgttaactttgtcgtgtttattaagtatcccatgttgctgcatt 32811213  T
Q  395 ttgattagtttggtcaccataaaaatgttgttgaatattttaatttgattgaattcgttcacgtgtatcgattgtggtattgaa 478  Q
    || ||| | ||||| ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  32811212 ttaatttgattggttaccataaaattgttgttgaatattttaatttgattgaatctgttcacgtgtatcgattgtggtactgaa 32811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 180 - 478
Target Start/End: Original strand, 24238151 - 24238439
Alignment:
Q  180 ataatatgaattgtgatgtttatgttttactgaatgagtgtaagaatgtgaattttgaactaatttcaagnnnnnnnnnnnnnnnnnngttggtttattt 279  Q
    |||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||||||||                  ||||||||||||    
T  24238151 ataatatgaattgtgatgtttaagttttgctgaatgagaataagaatgtgaattttgaactaatttcaagtttttttt----------gttggtttattt 24238240  T
Q  280 gtggatgatttatctaccggtacttcactgagcatttgccttcacttttggcatctctcgcgatccaggtttgttcacattgccgtgtttattaagtatc 379  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  24238241 gtggatgatttatctaccgattcttcactgagcatttgcgttcactttccgtatctctcgcgatccaggtttgttcactttgccgtgtttattaagtatc 24238340  T
Q  380 tcatgttgctgcattttgattagtttggtcaccataaaaatgttgttgaatattttaatttgattgaattcgttcacgtgtatcgattgtggtattgaa 478  Q
     |||||||||||||||| ||| | ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  24238341 ccatgttgctgcattttaatttgattggttaccataaaattgttgttgaatattttaatttgattgaatccgttcacgtgtatcgattgtggtactgaa 24238439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 24230163 - 24230240
Alignment:
Q  101 tgattggatttgttcatgtttattaatctgatttgatctttttgttgacattagaattagtagaaaatgatatgaaat 178  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24230163 tgattggatttgttcatgtttattaatctgatttgatatttttgttgacattagaattagtagaaaatgatatgaaat 24230240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 268 - 455
Target Start/End: Original strand, 24229992 - 24230178
Alignment:
Q  268 gttggtttatttgtggatgatttatctaccggtacttcactgagcatttgccttcacttttggcatctctcgcgatccaggtttgttcac---attgccg 364  Q
    ||||||| ||||||||||||||||||| ||| | ||||  ||||||||||  || |||||  | ||||||||  |  ||||||||| |||   |||| ||    
T  24229992 gttggttaatttgtggatgatttatctgccgattcttcgatgagcatttgagttgactttctgtatctctcg--aatcaggtttgtgcactctattgtcg 24230089  T
Q  365 tgtttattaagtatctcatgttgctgcattttgattagtttggtcaccataaaaatgttgttgaatattttaatttgattgaattcgttca 455  Q
    |  |||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||| |||||    
T  24230090 t--ttattaagtatcccatgttgctggattttgattagtttggttaccataaaaatgttgttgaatgtttttatttgattggatttgttca 24230178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 377 - 455
Target Start/End: Complemental strand, 32811560 - 32811482
Alignment:
Q  377 atctcatgttgctgcattttgattagtttggtcaccataaaaatgttgttgaatattttaatttgattgaattcgttca 455  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| |||||    
T  32811560 atctcatgttgctgaattttgattagtttggttaccataaaaatgttgttgaatgttttaatttgattggatttgttca 32811482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 24229832 - 24229901
Alignment:
Q  15 atgaaatgagaataagaactgtgatgtttaagttttgttggttaatctaaaatgaaaatgagaataagat 84  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||    
T  24229832 atgaaataagaataagaactgtgatgtttaacttttgttggttaatttggaatgaaaatgagaataagat 24229901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 24229683 - 24229766
Alignment:
Q  18 aaatgagaataagaactgtgatgtttaagttttgttggttaatctaaaatgaaaatgagaataagatgatttgtaggttaatct 101  Q
    ||||||||||||||| | |||||||| ||||| ||| |||||||| |||| |||||||||||||| | |||||||| |||||||    
T  24229683 aaatgagaataagaattttgatgttttagtttggtttgttaatctgaaataaaaatgagaataagctaatttgtagcttaatct 24229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 24229799 - 24229861
Alignment:
Q  139 tttttgttgacattagaattagtagaaaatgatatgaaatgataatatgaattgtgatgttta 201  Q
    |||||||||||||  |||||| ||||| |||||||||||| | |||| ||| |||||||||||    
T  24229799 tttttgttgacatgtgaattaatagaatatgatatgaaataagaataagaactgtgatgttta 24229861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 95 - 472
Target Start/End: Complemental strand, 11495461 - 11495095
Alignment:
Q  95 ttaatctgattggatttgttcatgtttattaatctgatttgatctttttgttgacattagaattagtagaaaatgatatgaaatgataatatgaattgtg 194  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11495461 ttaatttgattggatt-gttcatgtttattaatctgatttgatctttttgttgacattagaattagtagaaaatgatatgaaataataatatgaattgtg 11495363  T
Q  195 atgtttatgttttactgaatgagtgtaagaatgtgaattttgaactaatttcaagnnnnnnnnnnnnnnnnnngttggtttatttgtggatgatttatct 294  Q
    ||||||| ||||| |||||||||  ||||||||||||||||||||| ||||||||                  |||||||||||||||||||||||||||    
T  11495362 atgtttaagttttgctgaatgagaataagaatgtgaattttgaactgatttcaagtttttttt----------gttggtttatttgtggatgatttatct 11495273  T
Q  295 accggtacttcactgagcatttgccttcacttttggcatctctcgcgatccaggtttgttcacattgccgtgtttattaagtatctcatgttgctgcatt 394  Q
    |||| | ||||||||||||||||||||||||||  | ||||||| ||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  11495272 accgattcttcactgagcatttgccttcactttccgtatctctcacgatccaagtttgttcactttgtcgtgtttattaagtatcccatgttgctgcatt 11495173  T
Q  395 ttgattagtttggtcaccataaaaatgttgttgaatattttaatttgattgaattcgttcacgtgtatcgattgtggt 472  Q
    || ||| | ||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11495172 ttaatttgattggttaccatgaaattgttgttgaatattttaatttgattgaatccgttcacgtgtatcgattgtggt 11495095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 268 - 445
Target Start/End: Complemental strand, 11495626 - 11495450
Alignment:
Q  268 gttggtttatttgtggatgatttatctaccggtacttcactgagcatttgccttcacttttggcatctctcgcgatccaggtttgttcacattgccgt-g 366  Q
    ||||||| ||||||||||||||||||| ||||| ||||  ||||||||||  || |||||  ||||||||||  |  ||||||||| |||  ||  || |    
T  11495626 gttggttaatttgtggatgatttatctgccggttcttcgatgagcatttgagttgactttctgcatctctcg--aatcaggtttgtgcactctgttgtcg 11495529  T
Q  367 tttattaagtatctcatgttgctgcattttgattagtttggtcaccataaaaatgttgttgaatattttaatttgattg 445  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  11495528 tttattaagtatcccatgttgctgaattttgattagtttggttaccataaaaatgttgttgaatgttttaatttgattg 11495450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 11495870 - 11495801
Alignment:
Q  15 atgaaatgagaataagaactgtgatgtttaagttttgttggttaatctaaaatgaaaatgagaataagat 84  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||    
T  11495870 atgaaataagaataagaactgtgatgtttaacttttgttggttaatttggaatgaaaatgagaataagat 11495801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 11495769 - 11495701
Alignment:
Q  15 atgaaatgagaataagaactgtgatgtttaagttttgttggttaatctaaaatgaaaatgagaataaga 83  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||||    
T  11495769 atgaaataagaataagaactgtgatgtttaacttttgttggttaatttggaatgaaaatgagaataaga 11495701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 345 - 405
Target Start/End: Original strand, 10529146 - 10529206
Alignment:
Q  345 caggtttgttcacattgccgtgtttattaagtatctcatgttgctgcattttgattagttt 405  Q
    |||||||||||||  |  |||||||||||||| || |||||||||||||||||||||||||    
T  10529146 caggtttgttcactctttcgtgtttattaagtttcccatgttgctgcattttgattagttt 10529206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 11495998 - 11495931
Alignment:
Q  36 tgatgtttaagttttgttggttaatctaaaatgaaaatgagaataagatgatttgtaggttaatctga 103  Q
    |||||||| ||||| ||| |||||||| |||| |||||||||||||| | |||||||| |||||||||    
T  11495998 tgatgttttagtttggtttgttaatctgaaataaaaatgagaataagctaatttgtagcttaatctga 11495931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 2e-85; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 269 - 473
Target Start/End: Complemental strand, 544530 - 544326
Alignment:
Q  269 ttggtttatttgtggatgatttatctaccggtacttcactgagcatttgccttcacttttggcatctctcgcgatccaggtttgttcacattgccgtgtt 368  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  | ||||||||| |||||||||||||||| ||| ||||||    
T  544530 ttggtttatttgtggatgatttatctaccgatacttcactgagcatttgcgttcactttccgtatctctcgcaatccaggtttgttcactttgtcgtgtt 544431  T
Q  369 tattaagtatctcatgttgctgcattttgattagtttggtcaccataaaaatgttgttgaatattttaatttgattgaattcgttcacgtgtatcgattg 468  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  544430 tattaagtatcccatgttgctgcattttgattagtttggttaccataaaaatgttgttgaatattttaatttgattgaatccgttcacgtgtatcgattg 544331  T
Q  469 tggta 473  Q
    |||||    
T  544330 tggta 544326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 29490665 - 29490581
Alignment:
Q  15 atgaaatgagaataagaactgtgatgtttaagttttgttggttaatctaaaatgaaaatgagaataagatgatttgtaggttaat 99  Q
    ||||||||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  29490665 atgaaatgagaataagaactcaattgtttaagttttgttggttaatctgaaatgaaaatgagaataagctgatttataggttaat 29490581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 29490815 - 29490729
Alignment:
Q  18 aaatgagaataagaactgtgatgttt-aagttttgttggttaatctaaaatgaaaatgagaataagatgatttgtaggttaatctga 103  Q
    ||||||||||||||| | |||||||| |||||| ||| ||||||||||||| |||||||||||||  |  |||||||||||||||||    
T  29490815 aaatgagaataagaattatgatgttttaagtttggtttgttaatctaaaataaaaatgagaataaactagtttgtaggttaatctga 29490729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 544719 - 544672
Alignment:
Q  139 tttttgttgacattagaattagtagaaaatgatatgaaatgataatat 186  Q
    |||||||||| || ||||||||||||||||||||||||| ||||||||    
T  544719 tttttgttgaaatgagaattagtagaaaatgatatgaaaggataatat 544672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 29490566 - 29490527
Alignment:
Q  139 tttttgttgacattagaattagtagaaaatgatatgaaat 178  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  29490566 tttttgttgacataagaattagtagaaaattatatgaaat 29490527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 7390 - 7440
Alignment:
Q  156 attagtagaaaatgatatgaaatgataatatgaattgtgatgtttatgttt 206  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||||| ||||    
T  7390 attagtagaaaatgatatgaaatgagaataagaattttgatgtttaagttt 7440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 7619 - 7682
Alignment:
Q  345 caggtttgttcacattgccgtgtttattaagtatctcatgttgctgcattttgattagtttggt 408  Q
    |||||||||||||  ||  ||||||||||||| || ||| ||||| ||||||||||||||||||    
T  7619 caggtttgttcactctgttgtgtttattaagtttcccatattgctacattttgattagtttggt 7682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University