View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8300_high_15 (Length: 346)

Name: NF8300_high_15
Description: NF8300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8300_high_15
NF8300_high_15
[»] chr6 (32 HSPs)
chr6 (21-339)||(26617659-26617977)
chr6 (21-339)||(26723587-26723905)
chr6 (108-319)||(26811633-26811844)
chr6 (108-318)||(26949785-26949995)
chr6 (122-314)||(27214555-27214750)
chr6 (122-314)||(27234478-27234673)
chr6 (108-318)||(25071783-25071993)
chr6 (197-318)||(26959379-26959500)
chr6 (192-318)||(26635898-26636024)
chr6 (192-318)||(26741864-26741990)
chr6 (123-318)||(28234702-28234897)
chr6 (164-318)||(26848840-26848994)
chr6 (192-318)||(26975260-26975386)
chr6 (220-292)||(27337944-27338016)
chr6 (220-292)||(27398684-27398756)
chr6 (108-284)||(28227074-28227250)
chr6 (220-314)||(25579955-25580049)
chr6 (220-314)||(26143101-26143195)
chr6 (220-314)||(25538776-25538870)
chr6 (150-284)||(28181280-28181414)
chr6 (192-285)||(24715793-24715886)
chr6 (229-318)||(28185611-28185700)
chr6 (229-318)||(28297566-28297655)
chr6 (229-318)||(28514418-28514507)
chr6 (248-291)||(26937370-26937413)
chr6 (228-314)||(26056170-26056256)
chr6 (228-314)||(26076140-26076226)
chr6 (229-282)||(26656234-26656287)
chr6 (229-282)||(26762205-26762258)
chr6 (192-289)||(27664999-27665096)
chr6 (108-275)||(28242928-28243095)
chr6 (228-314)||(25481986-25482072)
[»] chr2 (1 HSPs)
chr2 (164-318)||(17993537-17993691)
[»] scaffold0051 (2 HSPs)
scaffold0051 (27-96)||(38657-38726)
scaffold0051 (27-96)||(22705-22774)
[»] chr4 (7 HSPs)
chr4 (27-96)||(16413637-16413706)
chr4 (27-96)||(552847-552916)
chr4 (230-315)||(18699243-18699328)
chr4 (230-315)||(18679410-18679495)
chr4 (230-315)||(18723928-18724013)
chr4 (230-315)||(18731347-18731432)
chr4 (230-274)||(18655361-18655405)
[»] chr1 (5 HSPs)
chr1 (27-96)||(17531804-17531873)
chr1 (227-314)||(28127523-28127610)
chr1 (227-314)||(28164207-28164294)
chr1 (27-96)||(17536213-17536285)
chr1 (221-314)||(268201-268294)
[»] scaffold0038 (3 HSPs)
scaffold0038 (108-284)||(27572-27748)
scaffold0038 (229-318)||(34970-35059)
scaffold0038 (108-275)||(43090-43257)
[»] scaffold0019 (1 HSPs)
scaffold0019 (227-284)||(58169-58226)


Alignment Details
Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 21 - 339
Target Start/End: Original strand, 26617659 - 26617977
Alignment:
Q  21 caaattattattatttctcctattcttattttctgcataacttagcagaccgatttcctctagaatatcaccaacagtccacatcattcattcactactt 120  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  26617659 caaattattattattcctcctattcttattttctgcataacttagcagaccgattctctctagaatatcaccaacagtccacatcattcattcactactt 26617758  T
Q  121 aaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagcacttactgagttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26617759 aaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagcacttactgagttt 26617858  T
Q  221 gaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaagc 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26617859 gaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaagc 26617958  T
Q  321 acgcttcttcatctcactc 339  Q
    || ||||||||| ||||||    
T  26617959 acacttcttcatttcactc 26617977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 21 - 339
Target Start/End: Original strand, 26723587 - 26723905
Alignment:
Q  21 caaattattattatttctcctattcttattttctgcataacttagcagaccgatttcctctagaatatcaccaacagtccacatcattcattcactactt 120  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  26723587 caaattattattattcctcctattcttattttctgcataacttagcagaccgattctctctagaatatcaccaacagtccacatcattcattcactactt 26723686  T
Q  121 aaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagcacttactgagttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26723687 aaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagcacttactgagttt 26723786  T
Q  221 gaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaagc 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26723787 gaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaagc 26723886  T
Q  321 acgcttcttcatctcactc 339  Q
    || ||||||||| ||||||    
T  26723887 acacttcttcatttcactc 26723905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 108 - 319
Target Start/End: Original strand, 26811633 - 26811844
Alignment:
Q  108 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagc 207  Q
    ||||| ||||||| ||||||||  ||||||||||||| ||||||||||||| ||||||||||||| | || |||||| | ||||||| ||||||||||||    
T  26811633 tcattaactacttcaaggaaaaaggtcgccttgttctaccagttttctatggtgtggaaccttctcacgtgcgacatcaaaataacaagtatggtgaagc 26811732  T
Q  208 acttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggc 307  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  26811733 acttactgagtttgaagaaatgttccaaaataacaaggaaaacatggatcggttgcagaaatggaagatagctcttaaccaagttggtaacttatctggc 26811832  T
Q  308 tatcatttcaag 319  Q
    | ||||||||||    
T  26811833 tttcatttcaag 26811844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 108 - 318
Target Start/End: Original strand, 26949785 - 26949995
Alignment:
Q  108 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagc 207  Q
    ||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||| ||||||||| | || |||||| | ||| | || |||||||||||    
T  26949785 tcattcactacttcaaggaaaaaggtcgccttgttctgccagttttctatgatgtagaaccttctcacgtgcgacatcagaattatagttatggtgaagc 26949884  T
Q  208 acttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggc 307  Q
    |||| || ||  |||||| ||||||||||| | |||  |||||||||||||||||| |||||||||||||||||| ||| ||| |  | |||||||||||    
T  26949885 acttgctaagcatgaagagaggttccaaaagagcaaaaaaaacatggagcggttgctgaaatggaagatagctctgaacaaagttgctgacttatctggc 26949984  T
Q  308 tatcatttcaa 318  Q
    || ||||||||    
T  26949985 taccatttcaa 26949995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 314
Target Start/End: Original strand, 27214555 - 27214750
Alignment:
Q  122 aaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacatt---acaataacaggtatggtgaagcacttactgagt 218  Q
    ||||||||  ||||||||||||| || ||||||||||  || ||||||||| |  | ||||||    |||| ||||| ||||||||||| ||| || ||     
T  27214555 aaggaaaaaggtcgccttgttctacctgttttctatggcgttgaaccttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagc 27214654  T
Q  219 ttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
     |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  27214655 atgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcatt 27214750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 314
Target Start/End: Complemental strand, 27234673 - 27234478
Alignment:
Q  122 aaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacatt---acaataacaggtatggtgaagcacttactgagt 218  Q
    ||||||||  ||||||||||||| || ||||||||||  || ||||||||| |  | ||||||    |||| ||||| ||||||||||| ||| || ||     
T  27234673 aaggaaaaaggtcgccttgttctacctgttttctatggcgttgaaccttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagc 27234574  T
Q  219 ttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
     |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  27234573 atgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcatt 27234478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 108 - 318
Target Start/End: Original strand, 25071783 - 25071993
Alignment:
Q  108 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagc 207  Q
    ||||||||||||| |||||||| |||||||||||||| ||| |||||||||     ||||||||  | || ||| |    ||| |||| ||||||||| |    
T  25071783 tcattcactacttcaaggaaaagagtcgccttgttctaccaattttctatggcaccgaaccttcgcaggtgcgaaaactgaatgacagttatggtgaatc 25071882  T
Q  208 acttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggc 307  Q
    | || || ||  ||||||  |||| ||||||||||||||| ||||||||||||||| || |||||||| |||||||||| |||||  ||||||||||||     
T  25071883 atttgctaagcatgaagaggggtttcaaaataacaaggaacacatggagcggttgctgacatggaagaaagctcttaacgaagctgctaacttatctgga 25071982  T
Q  308 tatcatttcaa 318  Q
     ||||||||||    
T  25071983 catcatttcaa 25071993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 26959379 - 26959500
Alignment:
Q  197 tatggtgaagcacttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttata 296  Q
    ||||||||||| ||| || ||  ||||||   ||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||  ||    
T  26959379 tatggtgaagcgcttgctaagcatgaagagcagtttcaaaatagcaaggaaaacatggagcggttgctgaaatggaagaaagctcttaaccaagctgcta 26959478  T
Q  297 acttatctggctatcatttcaa 318  Q
    ||||||||||| | ||||||||    
T  26959479 acttatctggccaccatttcaa 26959500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 318
Target Start/End: Original strand, 26635898 - 26636024
Alignment:
Q  192 acaggtatggtgaagcacttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagc 291  Q
    |||| ||||||||||| ||| || ||  ||||||   ||| ||||||| |||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  26635898 acagttatggtgaagcgcttgctaagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagc 26635997  T
Q  292 ttataacttatctggctatcatttcaa 318  Q
    |  ||||||||||||| | ||||||||    
T  26635998 tgctaacttatctggccaccatttcaa 26636024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 318
Target Start/End: Original strand, 26741864 - 26741990
Alignment:
Q  192 acaggtatggtgaagcacttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagc 291  Q
    |||| ||||||||||| ||| || ||  ||||||   ||| ||||||| |||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  26741864 acagttatggtgaagcgcttgctaagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagc 26741963  T
Q  292 ttataacttatctggctatcatttcaa 318  Q
    |  ||||||||||||| | ||||||||    
T  26741964 tgctaacttatctggccaccatttcaa 26741990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 28234702 - 28234897
Alignment:
Q  123 aggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagcacttactgagtttga 222  Q
    |||||||||| ||||| ||| | ||| ||||||||||||||||||||||| | || |||||| ||||   ||| |||||| |||||||   |||   |      
T  28234702 aggaaaatagacgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaaagcactggatgatcatat 28234801  T
Q  223 agaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaa 318  Q
    | | | |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||  ||| | | |||||| |||||| | ||||||||    
T  28234802 aaagaagttccaaaataacaaggataacatggagaggttgcagaaatggaagatggctcttactcaaacatctaacttttctggccaccatttcaa 28234897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 318
Target Start/End: Original strand, 26848840 - 26848994
Alignment:
Q  164 gaaccttctgaagtacgacattacaataacaggtatggtgaagcacttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgc 263  Q
    ||||||||| | || |||||| | ||||  || ||||||||||||||| || ||  ||||||   ||| |||||||||||||||| ||||||||| ||||    
T  26848840 gaaccttctcatgtgcgacatcagaatagtagttatggtgaagcacttgctaagcatgaagaggtgtttcaaaataacaaggaaagcatggagcgtttgc 26848939  T
Q  264 agaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaa 318  Q
      |||||||||| |||||||||||| |||  ||||||||||||| | ||||||||    
T  26848940 gtaaatggaagaaagctcttaaccatgctgctaacttatctggccaccatttcaa 26848994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 318
Target Start/End: Original strand, 26975260 - 26975386
Alignment:
Q  192 acaggtatggtgaagcacttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagc 291  Q
    |||| |||||||||| |||| || ||  ||||||  |||| |||||||| || |||||| ||||||||||||  |||||||||| |||||||||||||||    
T  26975260 acagttatggtgaagtacttgctaagcatgaagaggggtttcaaaataaaaatgaaaacttggagcggttgcttaaatggaagaaagctcttaaccaagc 26975359  T
Q  292 ttataacttatctggctatcatttcaa 318  Q
    |  ||||||||||||| | ||||||||    
T  26975360 tgctaacttatctggccaccatttcaa 26975386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 27338016 - 27337944
Alignment:
Q  220 tgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagct 292  Q
    |||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||    
T  27338016 tgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagct 27337944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 27398756 - 27398684
Alignment:
Q  220 tgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagct 292  Q
    |||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||    
T  27398756 tgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagct 27398684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 284
Target Start/End: Original strand, 28227074 - 28227250
Alignment:
Q  108 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagc 207  Q
    ||||||| | ||| ||||||||| | ||||||||| | ||| ||||||||||||||||||||||| | || |||||| ||||   ||| |||||| ||||    
T  28227074 tcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatgatgtggaaccttctcatgtgcgacatcacaagggcagttatggtaaagc 28227173  T
Q  208 acttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctctta 284  Q
    |||   |||   |  ||| |||||||||||||||||| | | ||||||  ||||||||||||||||||| |||||||    
T  28227174 actggatgatcatatagagaggttccaaaataacaagcatagcatggataggttgcagaaatggaagatggctctta 28227250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 25579955 - 25580049
Alignment:
Q  220 tgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
    |||||| ||||| ||||||||| || ||||||||||||| ||||   |||||||||||||||||| |||||||  |||||| || ||||||||||    
T  25579955 tgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcatt 25580049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 26143101 - 26143195
Alignment:
Q  220 tgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
    |||||| ||||| ||||||||| || ||||||||||||| ||||   |||||||||||||||||| |||||||  |||||| || ||||||||||    
T  26143101 tgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccggctatcatt 26143195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 25538776 - 25538870
Alignment:
Q  220 tgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
    |||||| ||||| ||||||||  || ||||||||||||| ||||   |||||||||||||||||| |||||||  |||||| || ||||||||||    
T  25538776 tgaagagaggtttcaaaataatgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccggctatcatt 25538870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 284
Target Start/End: Original strand, 28181280 - 28181414
Alignment:
Q  150 ttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagcacttactgagtttgaagaaaggttccaaaataacaaggaaaa 249  Q
    ||||||||||||||||||||||| | || |||||| ||||   ||| |||||| |||||||   |||   |  ||| |||||||||||||||||| | |     
T  28181280 ttttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaaagcactggatgatcatatagagaggttccaaaataacaagcatag 28181379  T
Q  250 catggagcggttgcagaaatggaagatagctctta 284  Q
    ||||||  ||||||||||||||||||| |||||||    
T  28181380 catggataggttgcagaaatggaagattgctctta 28181414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 24715793 - 24715886
Alignment:
Q  192 acaggtatggtgaagcacttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaa 285  Q
    |||| ||||||||||| ||| || ||  ||||||  |||| ||||||||||||||| ||||||| ||||||| ||||| ||||| |||||||||    
T  24715793 acagttatggtgaagctcttgctaagcatgaagacgggtttcaaaataacaaggaacacatggaccggttgctgaaatagaagacagctcttaa 24715886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 318
Target Start/End: Original strand, 28185611 - 28185700
Alignment:
Q  229 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaa 318  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||  |||||||  ||| ||  |||||| |||||| | ||||||||    
T  28185611 gttccaaaataacaaggatagcatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaa 28185700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 28297655 - 28297566
Alignment:
Q  229 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaa 318  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||  |||||||  ||| ||  |||||| |||||| | ||||||||    
T  28297655 gttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaa 28297566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 318
Target Start/End: Original strand, 28514418 - 28514507
Alignment:
Q  229 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaa 318  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||  |||||||  ||| ||  |||||| |||||| | ||||||||    
T  28514418 gttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaa 28514507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 291
Target Start/End: Original strand, 26937370 - 26937413
Alignment:
Q  248 aacatggagcggttgcagaaatggaagatagctcttaaccaagc 291  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  26937370 aacatggagaggttgcggaaatggaagatagctcttaaccaagc 26937413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 26056170 - 26056256
Alignment:
Q  228 ggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
    |||||||||||||| || ||||||||||||| ||||   |||||||||| |||||||  ||||||  |||||| || ||||||||||    
T  26056170 ggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccggctatcatt 26056256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 26076140 - 26076226
Alignment:
Q  228 ggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
    |||||||||||||| || ||||||||||||| ||||   |||||||||| |||||||  ||||||  |||||| || ||||||||||    
T  26076140 ggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccggctatcatt 26076226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 26656234 - 26656287
Alignment:
Q  229 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctct 282  Q
    ||||||||||||||||||||||||| || ||||| || |||||||||| |||||    
T  26656234 gttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctct 26656287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 26762205 - 26762258
Alignment:
Q  229 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctct 282  Q
    ||||||||||||||||||||||||| || ||||| || |||||||||| |||||    
T  26762205 gttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctct 26762258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 27665096 - 27664999
Alignment:
Q  192 acaggtatggtgaagcacttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaa 289  Q
    |||| ||||||||||||||| || ||  |||||    ||| |||||| ||| |||||||||||||||||||| ||||||||||  ||||||| |||||    
T  27665096 acagttatggtgaagcacttgctaagcatgaagtggagtttcaaaatgacatggaaaacatggagcggttgctgaaatggaaggaagctcttcaccaa 27664999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 275
Target Start/End: Original strand, 28242928 - 28243095
Alignment:
Q  108 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagc 207  Q
    ||||||||| ||  ||| ||||| | ||||| ||| | ||| ||||||||||||||||||||||| | ||  ||||| | | |  ||| |||||| ||||    
T  28242928 tcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaaccttctaacgtgagacatcagattggcagttatggtaaagc 28243027  T
Q  208 acttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaaga 275  Q
    |||  |||||  |   || | ||||||||||| || ||| ||||||||| ||||||||||||||||||    
T  28243028 actggctgagcatattgagaagttccaaaatagcacggataacatggagaggttgcagaaatggaaga 28243095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 25481986 - 25482072
Alignment:
Q  228 ggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
    |||||||||||||| || ||||||||||||| ||||   |||||||||| |||||||  ||||||  ||| || || ||||||||||    
T  25481986 ggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaatttgtccggctatcatt 25482072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 164 - 318
Target Start/End: Complemental strand, 17993691 - 17993537
Alignment:
Q  164 gaaccttctgaagtacgacattacaataacaggtatggtgaagcacttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgc 263  Q
    ||||||||| | || |||||| | ||| | || ||||||||||||||| || ||  ||||||  | || ||||||| ||||||||||||||||||||||     
T  17993691 gaaccttctcaggtgcgacatcagaatgatagttatggtgaagcacttgctaagcatgaagagggttttcaaaatagcaaggaaaacatggagcggttgt 17993592  T
Q  264 agaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaa 318  Q
     ||||||||||| ||||||||||||||||  ||||||||||||| | ||||||||    
T  17993591 tgaaatggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaa 17993537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 38726 - 38657
Alignment:
Q  27 attattatttctcctattcttattttctgcataacttagcagaccgatttcctctagaatatcaccaaca 96  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  38726 attattattcctcctattcttattttctgcataacttagcagaccaattgcctctagaatatcaccaaca 38657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 22774 - 22705
Alignment:
Q  27 attattatttctcctattcttattttctgcataacttagcagaccgatttcctctagaatatcaccaaca 96  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  22774 attattattcctcctattcttgttttctgcataacttagcagaccaattccctctagaatatcgccaaca 22705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 16413706 - 16413637
Alignment:
Q  27 attattatttctcctattcttattttctgcataacttagcagaccgatttcctctagaatatcaccaaca 96  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  || |||||| |||||||||||||    
T  16413706 attattattcctcctattcttattttctgcataacttagcagacctgttccctctaaaatatcaccaaca 16413637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 552916 - 552847
Alignment:
Q  27 attattatttctcctattcttattttctgcataacttagcagaccgatttcctctagaatatcaccaaca 96  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||| ||  ||||||| |||||||||||    
T  552916 attattattcctcctatttttattttctgcataacttagcagaccggttctctctagattatcaccaaca 552847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 18699328 - 18699243
Alignment:
Q  230 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcattt 315  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| ||||||| | | |||||  |||||| || ||||| |||||    
T  18699328 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccattt 18699243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 18679495 - 18679410
Alignment:
Q  230 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcattt 315  Q
    ||||||||||||||  |||||||||||||||||||  |||||||| ||||||| | | |||||  |||||| || ||||| |||||    
T  18679495 ttccaaaataacaataaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccattt 18679410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 18724013 - 18723928
Alignment:
Q  230 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcattt 315  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| | ||||| | | |||||  |||||| || ||||| |||||    
T  18724013 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattt 18723928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 18731432 - 18731347
Alignment:
Q  230 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcattt 315  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| | ||||| | | |||||  |||||| || ||||| |||||    
T  18731432 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattt 18731347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 18655405 - 18655361
Alignment:
Q  230 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaag 274  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||    
T  18655405 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaag 18655361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 17531873 - 17531804
Alignment:
Q  27 attattatttctcctattcttattttctgcataacttagcagaccgatttcctctagaatatcaccaaca 96  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  17531873 attattattcctcctatccttattttctgcataacttagcagaccggttctctctagaatatcaccaaca 17531804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 314
Target Start/End: Complemental strand, 28127610 - 28127523
Alignment:
Q  227 aggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
    |||||||||||||||||| ||||||||||||| |||||  |||||||||||||||| | |||||||  |||||| || ||||| ||||    
T  28127610 aggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccggctaccatt 28127523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 314
Target Start/End: Complemental strand, 28164294 - 28164207
Alignment:
Q  227 aggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
    |||||||||||||||||| ||||||||||||| |||||  |||||||||||||||| | |||||||  |||||| || ||||| ||||    
T  28164294 aggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccggctaccatt 28164207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 17536285 - 17536213
Alignment:
Q  27 attattatttctcctattctt---attttctgcataacttagcagaccgatttcctctagaatatcaccaaca 96  Q
    ||||||||| |||||||||||   ||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  17536285 attattattcctcctattcttcttattttctgcataacttagcagaccggttctctctagaatatcaccaaca 17536213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 268294 - 268201
Alignment:
Q  221 gaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatt 314  Q
    ||||| || |||||||||| |||| |||||||||||||||||||  |||||||| | ||||| | |||||||| |||||| |||||||| ||||    
T  268294 gaagagagtttccaaaatagcaagaaaaacatggagcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctggctaccatt 268201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 284
Target Start/End: Original strand, 27572 - 27748
Alignment:
Q  108 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagc 207  Q
    ||||||| | ||| ||||||||| | ||||||||| | ||| ||||||||||||||||||||||| | || |||||| ||||   ||| |||||| ||||    
T  27572 tcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatgatgtggaaccttctcatgtgcgacatcacaagggcagttatggtaaagc 27671  T
Q  208 acttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctctta 284  Q
    |||   |||   |  ||| |||||||||||||||||| | | ||||||  ||||||||||||||||||| |||||||    
T  27672 actggatgatcatatagagaggttccaaaataacaagcatagcatggataggttgcagaaatggaagattgctctta 27748  T

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Target: scaffold0038; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 318
Target Start/End: Original strand, 34970 - 35059
Alignment:
Q  229 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggctatcatttcaa 318  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||  ||| | | |||||| |||||| | ||||||||    
T  34970 gttccaaaataacaaggataacatggagaggttgcagaaatggaagatggctcttactcaaacatctaacttttctggccaccatttcaa 35059  T

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Target: scaffold0038; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 275
Target Start/End: Original strand, 43090 - 43257
Alignment:
Q  108 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagc 207  Q
    ||||||||| ||  ||| ||||| | ||||| ||| | ||| ||||||||||||||||||||||| | ||  ||||| | | |  ||| |||||| ||||    
T  43090 tcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaaccttctaacgtgagacatcagattggcagttatggtaaagc 43189  T
Q  208 acttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaaga 275  Q
    |||  |||||  |   || | ||||||||||| || ||| ||||||||| ||||||||||||||||||    
T  43190 actggctgagcatattgagaagttccaaaatagcacggataacatggagaggttgcagaaatggaaga 43257  T

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Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 58226 - 58169
Alignment:
Q  227 aggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctctta 284  Q
    ||||||||||||| |||||| | ||| ||| |||||||||||||||||| ||||||||    
T  58226 aggttccaaaatagcaaggatagcatagagaggttgcagaaatggaagacagctctta 58169  T

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