View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8301_low_1 (Length: 638)

Name: NF8301_low_1
Description: NF8301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8301_low_1
NF8301_low_1
[»] chr1 (53 HSPs)
chr1 (14-305)||(19901042-19901332)
chr1 (556-620)||(19899080-19899144)
chr1 (393-448)||(33358047-33358102)
chr1 (393-448)||(36577301-36577356)
chr1 (393-448)||(40316833-40316888)
chr1 (393-448)||(52362609-52362664)
chr1 (393-448)||(10889935-10889990)
chr1 (393-448)||(15704951-15705006)
chr1 (393-448)||(29154905-29154960)
chr1 (397-448)||(41507087-41507138)
chr1 (393-448)||(50328030-50328085)
chr1 (388-448)||(13489789-13489849)
chr1 (393-429)||(48326113-48326149)
chr1 (393-448)||(8200202-8200257)
chr1 (303-342)||(18583814-18583853)
chr1 (393-448)||(35136971-35137026)
chr1 (393-448)||(50781459-50781514)
chr1 (393-448)||(50824868-50824923)
chr1 (393-448)||(50881999-50882054)
chr1 (393-427)||(19969463-19969497)
chr1 (393-426)||(4608308-4608341)
chr1 (403-448)||(45417899-45417944)
chr1 (393-430)||(48220033-48220070)
chr1 (305-342)||(49786968-49787005)
chr1 (398-443)||(51436664-51436709)
chr1 (388-448)||(3603238-3603298)
chr1 (393-429)||(32914961-32914997)
chr1 (393-448)||(6143810-6143865)
chr1 (393-448)||(8447863-8447918)
chr1 (393-448)||(20565007-20565062)
chr1 (393-448)||(26585768-26585823)
chr1 (393-448)||(26837579-26837634)
chr1 (393-448)||(33125214-33125269)
chr1 (393-448)||(47721536-47721591)
chr1 (393-448)||(47728528-47728583)
chr1 (390-448)||(50433896-50433955)
chr1 (394-448)||(5486023-5486077)
chr1 (395-429)||(7101578-7101612)
chr1 (396-430)||(23621373-23621407)
chr1 (396-430)||(23738152-23738186)
chr1 (393-423)||(46543332-46543362)
chr1 (395-429)||(52714792-52714826)
chr1 (343-392)||(19899155-19899203)
chr1 (305-342)||(23443413-23443450)
chr1 (392-448)||(15015525-15015580)
chr1 (388-448)||(21093242-21093302)
chr1 (385-444)||(21433280-21433340)
chr1 (393-448)||(29147762-29147818)
chr1 (303-339)||(32542898-32542934)
chr1 (393-429)||(34254240-34254276)
chr1 (396-448)||(36494578-36494630)
chr1 (396-448)||(38713697-38713749)
chr1 (393-448)||(47215618-47215674)
[»] chr7 (28 HSPs)
chr7 (393-448)||(41458723-41458778)
chr7 (396-448)||(3062457-3062509)
chr7 (393-448)||(7817763-7817818)
chr7 (393-448)||(11352863-11352918)
chr7 (386-448)||(10055514-10055576)
chr7 (395-448)||(42555691-42555744)
chr7 (393-448)||(4713700-4713756)
chr7 (396-448)||(25067350-25067402)
chr7 (393-448)||(34757359-34757415)
chr7 (393-448)||(28036871-28036926)
chr7 (393-448)||(41894042-41894097)
chr7 (388-430)||(33180594-33180636)
chr7 (395-448)||(3343221-3343274)
chr7 (302-342)||(8154812-8154852)
chr7 (396-448)||(21822491-21822543)
chr7 (393-448)||(13729853-13729908)
chr7 (393-448)||(23048289-23048344)
chr7 (393-448)||(32815295-32815350)
chr7 (397-444)||(43159468-43159515)
chr7 (393-448)||(43573432-43573487)
chr7 (398-440)||(15565047-15565089)
chr7 (395-448)||(42926266-42926320)
chr7 (399-448)||(46532629-46532679)
chr7 (520-557)||(11564893-11564930)
chr7 (400-429)||(44184455-44184484)
chr7 (393-429)||(12645799-12645835)
chr7 (396-448)||(41396905-41396957)
chr7 (397-429)||(49069390-49069422)
[»] chr3 (37 HSPs)
chr3 (393-448)||(3281605-3281660)
chr3 (393-448)||(6999297-6999352)
chr3 (393-448)||(24095295-24095350)
chr3 (393-448)||(49761434-49761489)
chr3 (393-448)||(55400126-55400181)
chr3 (393-448)||(51465803-51465858)
chr3 (388-448)||(36412250-36412311)
chr3 (393-448)||(9158761-9158817)
chr3 (393-448)||(33795613-33795669)
chr3 (393-429)||(46852021-46852057)
chr3 (393-448)||(54195467-54195522)
chr3 (393-447)||(23183541-23183595)
chr3 (304-342)||(43472714-43472752)
chr3 (379-448)||(10206848-10206917)
chr3 (395-448)||(28419105-28419158)
chr3 (393-430)||(41281610-41281647)
chr3 (396-429)||(46019608-46019641)
chr3 (306-342)||(2358894-2358930)
chr3 (393-429)||(24482852-24482888)
chr3 (400-448)||(24645483-24645531)
chr3 (393-448)||(37927093-37927149)
chr3 (393-448)||(34057842-34057897)
chr3 (393-448)||(36121948-36122003)
chr3 (393-448)||(37411002-37411057)
chr3 (393-448)||(37508387-37508442)
chr3 (393-448)||(39670986-39671041)
chr3 (393-448)||(44677373-44677428)
chr3 (393-448)||(50206859-50206914)
chr3 (395-430)||(55282581-55282616)
chr3 (304-342)||(2358053-2358091)
chr3 (384-426)||(3953355-3953397)
chr3 (394-448)||(39697112-39697166)
chr3 (395-448)||(1337734-1337787)
chr3 (395-448)||(52937310-52937363)
chr3 (397-429)||(9719341-9719373)
chr3 (396-432)||(16675423-16675459)
chr3 (306-342)||(52777898-52777934)
[»] chr6 (23 HSPs)
chr6 (393-448)||(868841-868896)
chr6 (393-448)||(18141190-18141245)
chr6 (396-448)||(20822761-20822813)
chr6 (396-448)||(32046825-32046877)
chr6 (393-448)||(3832590-3832645)
chr6 (393-448)||(13143271-13143326)
chr6 (400-448)||(26832773-26832821)
chr6 (393-429)||(35213450-35213486)
chr6 (393-448)||(6531069-6531124)
chr6 (393-448)||(32459405-32459460)
chr6 (393-426)||(754327-754360)
chr6 (395-448)||(1369487-1369540)
chr6 (396-448)||(2075343-2075395)
chr6 (393-448)||(23628488-23628544)
chr6 (393-448)||(5327480-5327535)
chr6 (397-448)||(31749492-31749543)
chr6 (397-444)||(33656902-33656949)
chr6 (398-448)||(5028160-5028210)
chr6 (393-448)||(2688953-2689009)
chr6 (398-426)||(6856057-6856085)
chr6 (392-448)||(14986632-14986688)
chr6 (396-448)||(22341067-22341119)
chr6 (393-448)||(28041702-28041758)
[»] chr5 (29 HSPs)
chr5 (393-448)||(41175595-41175650)
chr5 (395-448)||(15952936-15952989)
chr5 (393-448)||(10649562-10649617)
chr5 (393-448)||(43441865-43441920)
chr5 (393-448)||(3640086-3640141)
chr5 (393-448)||(8675322-8675377)
chr5 (388-429)||(43213943-43213984)
chr5 (393-429)||(32912184-32912220)
chr5 (381-444)||(6940026-6940089)
chr5 (393-448)||(34270454-34270509)
chr5 (393-429)||(189592-189628)
chr5 (396-448)||(2224918-2224970)
chr5 (393-429)||(10658993-10659029)
chr5 (302-338)||(26190572-26190608)
chr5 (396-448)||(31955262-31955314)
chr5 (388-448)||(34124748-34124808)
chr5 (396-448)||(42267472-42267524)
chr5 (397-444)||(18695450-18695497)
chr5 (397-448)||(21943589-21943640)
chr5 (393-448)||(35098894-35098949)
chr5 (393-426)||(189523-189556)
chr5 (393-426)||(15478807-15478840)
chr5 (397-429)||(8097396-8097428)
chr5 (306-342)||(13171243-13171279)
chr5 (396-448)||(15008442-15008494)
chr5 (396-448)||(17402814-17402866)
chr5 (393-429)||(19481071-19481107)
chr5 (306-342)||(36359856-36359892)
chr5 (396-448)||(38704089-38704141)
[»] chr2 (44 HSPs)
chr2 (396-448)||(14233610-14233662)
chr2 (393-448)||(6170757-6170812)
chr2 (393-448)||(23352796-23352851)
chr2 (393-448)||(24562906-24562961)
chr2 (393-448)||(29712105-29712159)
chr2 (393-447)||(3012741-3012795)
chr2 (392-448)||(37105765-37105821)
chr2 (393-448)||(6998957-6999012)
chr2 (393-448)||(13765527-13765582)
chr2 (393-448)||(36643973-36644028)
chr2 (396-444)||(34431721-34431769)
chr2 (393-448)||(15269988-15270043)
chr2 (390-429)||(25881690-25881729)
chr2 (393-448)||(32869953-32870008)
chr2 (393-448)||(42866877-42866932)
chr2 (304-342)||(36949210-36949248)
chr2 (395-448)||(2563831-2563884)
chr2 (395-448)||(13347705-13347758)
chr2 (396-429)||(28245873-28245906)
chr2 (393-430)||(34119541-34119578)
chr2 (395-448)||(36211951-36212004)
chr2 (396-448)||(5054735-5054787)
chr2 (396-448)||(41586560-41586612)
chr2 (396-448)||(44254728-44254780)
chr2 (393-448)||(670361-670416)
chr2 (393-448)||(2221120-2221175)
chr2 (393-448)||(4023239-4023294)
chr2 (395-430)||(4138291-4138326)
chr2 (398-448)||(11384908-11384959)
chr2 (393-444)||(31389678-31389729)
chr2 (397-444)||(34134663-34134710)
chr2 (393-448)||(40936953-40937008)
chr2 (396-426)||(7574584-7574614)
chr2 (387-429)||(36517342-36517384)
chr2 (396-429)||(9634328-9634361)
chr2 (399-448)||(11167413-11167462)
chr2 (396-429)||(16677819-16677852)
chr2 (395-448)||(22525887-22525940)
chr2 (398-430)||(9377601-9377633)
chr2 (393-429)||(10711870-10711906)
chr2 (393-448)||(17898122-17898178)
chr2 (396-448)||(28679443-28679495)
chr2 (396-448)||(33780287-33780339)
chr2 (393-429)||(39213659-39213695)
[»] chr8 (35 HSPs)
chr8 (393-448)||(30439395-30439450)
chr8 (393-448)||(36885377-36885432)
chr8 (394-448)||(36568088-36568142)
chr8 (392-448)||(37597365-37597421)
chr8 (393-448)||(12707277-12707332)
chr8 (303-342)||(31520150-31520189)
chr8 (393-448)||(34018935-34018990)
chr8 (395-448)||(38234137-38234191)
chr8 (395-448)||(4658145-4658198)
chr8 (396-448)||(4994508-4994561)
chr8 (403-448)||(41541984-41542029)
chr8 (388-448)||(1871499-1871559)
chr8 (393-448)||(22706129-22706185)
chr8 (393-448)||(28646799-28646855)
chr8 (393-448)||(28651383-28651439)
chr8 (393-448)||(29440411-29440467)
chr8 (393-448)||(1633779-1633834)
chr8 (397-444)||(10644694-10644741)
chr8 (393-448)||(16872045-16872100)
chr8 (393-448)||(32843831-32843886)
chr8 (393-448)||(36110265-36110320)
chr8 (393-448)||(42569618-42569673)
chr8 (395-426)||(45519705-45519736)
chr8 (304-342)||(21004999-21005037)
chr8 (396-429)||(7472919-7472952)
chr8 (393-429)||(9208210-9208247)
chr8 (395-448)||(14707234-14707287)
chr8 (309-342)||(31519332-31519365)
chr8 (388-429)||(31597094-31597135)
chr8 (305-342)||(41530519-41530556)
chr8 (393-448)||(6991696-6991752)
chr8 (397-429)||(10592202-10592234)
chr8 (392-448)||(23792978-23793034)
chr8 (396-447)||(38708186-38708238)
chr8 (393-448)||(42110071-42110127)
[»] chr4 (46 HSPs)
chr4 (401-448)||(13104279-13104326)
chr4 (393-448)||(1815890-1815945)
chr4 (393-448)||(17683468-17683523)
chr4 (393-448)||(22819776-22819831)
chr4 (396-448)||(56271487-56271539)
chr4 (393-448)||(2999239-2999294)
chr4 (393-448)||(4915562-4915617)
chr4 (393-448)||(12799841-12799896)
chr4 (393-447)||(40609742-40609797)
chr4 (393-448)||(47099147-47099202)
chr4 (393-448)||(54669473-54669528)
chr4 (396-429)||(18882867-18882900)
chr4 (387-444)||(42815536-42815593)
chr4 (391-423)||(13139299-13139331)
chr4 (393-448)||(33860773-33860829)
chr4 (393-429)||(39344869-39344905)
chr4 (392-448)||(45143561-45143617)
chr4 (392-448)||(45152330-45152386)
chr4 (306-342)||(50392680-50392716)
chr4 (393-448)||(5932047-5932102)
chr4 (393-448)||(9118753-9118808)
chr4 (393-448)||(12138980-12139035)
chr4 (393-448)||(14451520-14451575)
chr4 (393-448)||(30079973-30080028)
chr4 (393-448)||(32696308-32696363)
chr4 (307-342)||(34972731-34972766)
chr4 (393-448)||(41486032-41486087)
chr4 (393-448)||(43769838-43769893)
chr4 (393-448)||(47965864-47965919)
chr4 (393-448)||(51194396-51194451)
chr4 (393-448)||(53152210-53152265)
chr4 (397-447)||(42491202-42491252)
chr4 (397-447)||(50831648-50831698)
chr4 (393-447)||(51887791-51887844)
chr4 (306-339)||(23524475-23524508)
chr4 (393-426)||(31657795-31657828)
chr4 (397-426)||(32696681-32696710)
chr4 (397-430)||(52895402-52895435)
chr4 (396-448)||(53647316-53647369)
chr4 (388-448)||(17476003-17476063)
chr4 (391-423)||(26718520-26718552)
chr4 (391-423)||(26731148-26731180)
chr4 (396-448)||(31076180-31076232)
chr4 (396-448)||(33899218-33899270)
chr4 (407-447)||(38380979-38381019)
chr4 (393-448)||(42667332-42667388)
[»] scaffold0532 (1 HSPs)
scaffold0532 (393-448)||(11091-11146)
[»] scaffold0141 (1 HSPs)
scaffold0141 (393-448)||(12059-12114)
[»] scaffold0136 (1 HSPs)
scaffold0136 (393-429)||(38571-38607)
[»] scaffold0471 (1 HSPs)
scaffold0471 (393-448)||(134-189)


Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-144; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 14 - 305
Target Start/End: Complemental strand, 19901332 - 19901042
Alignment:
Q  14 attgcaaggttggctgacaaaagagaatcctttaagcatcggctcatctaaggcattcgagacactgaatgttgacattcctatcgttcagcaataggta 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  19901332 attgcaaggttggctgacaaaagagaatccttcaagcatcggctcatctgatgcatttgagagactgaatgttgacattcctatcgttcagcaataggta 19901233  T
Q  114 ttcacaatatgcacctacagaacatggcacggtacaagctgaatcatgtgaggtaaaaatcattgcaaacgaacaacctacacattctgattctattcct 213  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19901232 t-cacaatatgcacctacagaacatggcacggtacaagctgaatcatgtgaggtaaaaatcattgcaaacgaacaacctacacattctgattctattcct 19901134  T
Q  214 gagccttatgcgacaaatgaagaacaacatgtacaagcagatgtgcatgaacaaagggccttggttgaaacatcacccaaggtaactgataa 305  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19901133 gggccttatgcgacaaatgaagaacaacatgtacaagcagatgtgcatgaacaaagggccttggttgaaacatcacccaaggtaactgataa 19901042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 556 - 620
Target Start/End: Complemental strand, 19899144 - 19899080
Alignment:
Q  556 tcgtaagactagacttgtagatagatggtaacgatggtgagtaaattcagcacgtatgagggaac 620  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19899144 tcgtaagactagacttgtagatagatggtaacgatggtgagtaaattcagcacgtatgagggaac 19899080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 33358047 - 33358102
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  33358047 aggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccataattta 33358102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 36577301 - 36577356
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  36577301 aggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataattta 36577356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 40316833 - 40316888
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  40316833 aggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataattta 40316888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 52362664 - 52362609
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  52362664 aggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataattta 52362609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 10889935 - 10889990
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  10889935 aggagtgttatttgaacaactatttggttgacaacttttgtgacaaccataattta 10889990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 15704951 - 15705006
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||| |||||  | |||||||||||||||    
T  15704951 aggagtgttatttgaacaaccatttggttgataacttttaggacaaccataattta 15705006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 29154960 - 29154905
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||||||   |||||| ||||||||    
T  29154960 aggagtgttatttgaacaaccatttggttgacaacttatgggacaacgataattta 29154905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 41507087 - 41507138
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  41507087 gtgttatttgaacaaccatttggttgacaacttatttgacaactataattta 41507138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 50328030 - 50328085
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  50328030 aggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataattta 50328085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 13489849 - 13489789
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||||||||||||||||| ||||||||||||||||    |||||||||||||||    
T  13489849 aaatgaggagtgttatttgaacaactatttggttgacaacttctgggacaaccataattta 13489789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 48326149 - 48326113
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||||||||||||||||||    
T  48326149 aggagtgttatttgaacaaccatttggttgacaactt 48326113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 8200257 - 8200202
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||| || ||||||||||||||||   |||||||||||||||    
T  8200257 aggagtgttatttgaacagccttttggttgacaacttatgggacaaccataattta 8200202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 342
Target Start/End: Complemental strand, 18583853 - 18583814
Alignment:
Q  303 taagagtattactgttcccaccctataggattctcgcgcg 342  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  18583853 taagagtattacttttcccaccctataggattctcgcgcg 18583814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 35137026 - 35136971
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| |||||||||||||| ||  | |||||||||||||||    
T  35137026 aggagtgttatttgaacaatcatttggttgacaatttttaggacaaccataattta 35136971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 50781459 - 50781514
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||| ||||||||  | ||||| |||||||||    
T  50781459 aggagtgttatttgaacaaccatttggtagacaacttttaggacaatcataattta 50781514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 50824923 - 50824868
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||| |||||||||    ||||||||||||||    
T  50824923 aggagtgttatttgaacaaccatttggtggacaacttatgatacaaccataattta 50824868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 50881999 - 50882054
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||| ||||||| |||  |||||| |||||||||    
T  50881999 aggagtgttatttgaacaaccatttgattgacaatttatgtgacaatcataattta 50882054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 427
Target Start/End: Original strand, 19969463 - 19969497
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaac 427  Q
    |||||||||||||||||||||||||||||||||||    
T  19969463 aggagtgttatttgaacaaccatttggttgacaac 19969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 4608341 - 4608308
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaa 426  Q
    ||||||||||||||||||||||||||||||||||    
T  4608341 aggagtgttatttgaacaaccatttggttgacaa 4608308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 45417944 - 45417899
Alignment:
Q  403 tttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||    
T  45417944 tttgaacaaccatttgattgacaacttatgtgacaaccataattta 45417899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 430
Target Start/End: Original strand, 48220033 - 48220070
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactta 430  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  48220033 aggagtgttatttgaacaatcatttggttgacaactta 48220070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 49787005 - 49786968
Alignment:
Q  305 agagtattactgttcccaccctataggattctcgcgcg 342  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  49787005 agagtattacttttcccaccctataggattctcgcgcg 49786968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 443
Target Start/End: Original strand, 51436664 - 51436709
Alignment:
Q  398 tgttatttgaacaaccatttggttgacaacttacatgacaaccata 443  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||    
T  51436664 tgttatttgaacaataatttggttgacaacttatatgacaaccata 51436709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 3603298 - 3603238
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  3603298 aaatgaggagtgttatttgaacaaccaatttgatgacaacttatttgacaaccatatttta 3603238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 32914961 - 32914997
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||| ||||||||||||||||    
T  32914961 aggagtgttatttgaacaactatttggttgacaactt 32914997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 6143865 - 6143810
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||||||||||| ||||||||||||||| |  | |||||||||||||||    
T  6143865 aggattgttatttgaacaatcatttggttgacaacatttaagacaaccataattta 6143810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 8447918 - 8447863
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| ||||| ||||| ||||||  |||||| |||||||||    
T  8447918 aggagtgttatttgaacaatcatttagttgataacttatgtgacaatcataattta 8447863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 20565007 - 20565062
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  20565007 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 20565062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 26585768 - 26585823
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  26585768 aggagtgttatttgaacaaccaatttgatgacaacttatttgacaaccatacttta 26585823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 26837634 - 26837579
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  26837634 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 26837579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 33125214 - 33125269
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| |||||| |||||||| ||  |||||||||||| |||||||||    
T  33125214 aggagtgttatttaaacaactatttggttaacggcttacatgacaatcataattta 33125269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 47721591 - 47721536
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| ||||||||||| || |||||||||   |||||||||||||||    
T  47721591 aggagtgttatttaaacaaccatttagtggacaacttatgggacaaccataattta 47721536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 47728583 - 47728528
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| ||||||||||| || |||||||||   |||||||||||||||    
T  47728583 aggagtgttatttaaacaaccatttagtggacaacttatgggacaaccataattta 47728528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 448
Target Start/End: Complemental strand, 50433955 - 50433896
Alignment:
Q  390 ataaggagtgttatttgaacaac-catttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||  ||||| ||||||||||   ||||||||||||||||    
T  50433955 ataaggagtgttatttgaacaacgaatttgattgacaacttgtgtgacaaccataattta 50433896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 448
Target Start/End: Complemental strand, 5486077 - 5486023
Alignment:
Q  394 ggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||| |||||  ||||||||||| |  ||||||||||||||    
T  5486077 ggagtgttatttgaacaatcatttacttgacaacttataaaacaaccataattta 5486023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 429
Target Start/End: Original strand, 7101578 - 7101612
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||||| ||||||||||    
T  7101578 gagtgttatttgaacaaccatttgattgacaactt 7101612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 430
Target Start/End: Original strand, 23621373 - 23621407
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaactta 430  Q
    ||||||||||||||||||||||| |||||||||||    
T  23621373 agtgttatttgaacaaccatttgattgacaactta 23621407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 430
Target Start/End: Original strand, 23738152 - 23738186
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaactta 430  Q
    ||||||||||||||||||||||| |||||||||||    
T  23738152 agtgttatttgaacaaccatttgattgacaactta 23738186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 423
Target Start/End: Original strand, 46543332 - 46543362
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttga 423  Q
    |||||||||||||||||||||||||||||||    
T  46543332 aggagtgttatttgaacaaccatttggttga 46543362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 429
Target Start/End: Original strand, 52714792 - 52714826
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||||| ||||||||||    
T  52714792 gagtgttatttgaacaaccatttgattgacaactt 52714826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 19899203 - 19899155
Alignment:
Q  343 aagagaagttgacacaaaaagttgtagcaagcaaaatagttatagaaata 392  Q
    |||||||||| |||||||| |||||| ||||||| |||||||||||||||    
T  19899203 aagagaagttaacacaaaa-gttgtaccaagcaagatagttatagaaata 19899155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 23443450 - 23443413
Alignment:
Q  305 agagtattactgttcccaccctataggattctcgcgcg 342  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  23443450 agagtattacttttcccaccctgtaggattctcgcgcg 23443413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 15015580 - 15015525
Alignment:
Q  392 aaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||| |||||||||| || |||   |||||||||||||||    
T  15015580 aaggagtgttatttgaacaactatttggttgataa-ttatgggacaaccataattta 15015525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 21093242 - 21093302
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||||||||||||||||||| || || |||| ||||   |||||||||||||||    
T  21093242 aaatgaggagtgttatttgaacaaccaattagtggacagcttaagggacaaccataattta 21093302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 444
Target Start/End: Original strand, 21433280 - 21433340
Alignment:
Q  385 tagaaata-aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    |||||||| ||| ||||||||||||||| ||||||  ||||||||| || |||||||||||    
T  21433280 tagaaatagaggtgtgttatttgaacaatcatttgtgtgacaactttcaggacaaccataa 21433340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 29147762 - 29147818
Alignment:
Q  393 aggagtgttatttgaacaa-ccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| | |||||||||| || |||  ||||||||||||||||    
T  29147762 aggagtgttatttgaacaatcaatttggttgataatttatgtgacaaccataattta 29147818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 32542934 - 32542898
Alignment:
Q  303 taagagtattactgttcccaccctataggattctcgc 339  Q
    ||||||||||||| || ||||||||||||||||||||    
T  32542934 taagagtattactttttccaccctataggattctcgc 32542898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 34254240 - 34254276
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  34254240 aggagtgttatttgaacaatcatttggttgataactt 34254276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 36494630 - 36494578
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || | ||||||||||  |||||| |||||||||    
T  36494630 agtgttatttgaacaaccaatttggtgacaacttatttgacaatcataattta 36494578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 38713749 - 38713697
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| || ||||| | |||||||||| ||||||| |||||||||    
T  38713749 agtgttatttgaaaaatcatttagctgacaacttatatgacaatcataattta 38713697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 47215618 - 47215674
Alignment:
Q  393 aggagtgttatttgaacaac-catttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||  |||||||||| |||||   ||||||||||||||||    
T  47215618 aggagtgttatttgaacaactaatttggttgataacttttgtgacaaccataattta 47215674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 7e-23; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 41458778 - 41458723
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41458778 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 41458723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 3062509 - 3062457
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3062509 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 3062457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 7817818 - 7817763
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  7817818 aggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccataattta 7817763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 11352863 - 11352918
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  11352863 aggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataattta 11352918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 10055514 - 10055576
Alignment:
Q  386 agaaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||   |||||| ||||||||    
T  10055514 agaaaaaaggagtgttatttaaacaaccatttggttgacaacttatgggacaactataattta 10055576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 42555744 - 42555691
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  42555744 gagtgttatttgaacaaccatttggttgacaacttttgagacaaccataattta 42555691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 4713756 - 4713700
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||    
T  4713756 aggagtgttatttgaataaccaatttggttgacaacttatgtgacaaccataattta 4713700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 25067402 - 25067350
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||| |||||||||||||||||||| ||| |||| ||||||||||||    
T  25067402 agtgttatttaaacaaccatttggttgacaatttatatgataaccataattta 25067350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 34757359 - 34757415
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||||||||||||    
T  34757359 aggagtgttatttgaacaaccaatttggttgacaacttttgtgacaaccataattta 34757415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 28036926 - 28036871
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||| ||||||||||||||||||||||||||    |||||||||||||||    
T  28036926 aggagtgttaattgaacaaccatttggttgacaacttttgggacaaccataattta 28036871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 41894097 - 41894042
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||| |||||||| ||   ||||||||||||||||    
T  41894097 aggagtgttatttgaacaaccatttagttgacaatttttgtgacaaccataattta 41894042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 430
Target Start/End: Original strand, 33180594 - 33180636
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttggttgacaactta 430  Q
    |||| |||||| |||||||||||||||||||||||||||||||    
T  33180594 aaatgaggagtattatttgaacaaccatttggttgacaactta 33180636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 3343221 - 3343274
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||| ||||| ||||||||||  | |||||||||||||||    
T  3343221 gagtgttatttgaacaactatttgattgacaacttttaagacaaccataattta 3343274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 8154812 - 8154852
Alignment:
Q  302 ataagagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  8154812 ataagagtattacttttcccatcctataggattctcgcgcg 8154852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 21822491 - 21822543
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| |||||||||||  |  ||||||||||||||    
T  21822491 agtgttatttgaacaaccatttagttgacaacttttaaaacaaccataattta 21822543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 13729908 - 13729853
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| | |||||||||||||||||||||    |||||||||||||||    
T  13729908 aggagtgttatttcagcaaccatttggttgacaacttttgggacaaccataattta 13729853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 23048289 - 23048344
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  | ||||||||||||||    
T  23048289 aggagtgttatttgaacaaccaatttggtgacaacttattttacaaccataattta 23048344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 32815350 - 32815295
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  32815350 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 32815295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 444
Target Start/End: Original strand, 43159468 - 43159515
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    ||||||||||||||||||||| | |||||||||  |||||||||||||    
T  43159468 gtgttatttgaacaaccatttaggtgacaactttgatgacaaccataa 43159515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 43573432 - 43573487
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| |||||||||||||| ||    |||||||||||||||    
T  43573432 aggagtgttatttgaacaatcatttggttgacaatttttgagacaaccataattta 43573487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 15565089 - 15565047
Alignment:
Q  398 tgttatttgaacaaccatttggttgacaacttacatgacaacc 440  Q
    |||||||| ||||||||||||||||||||||||  ||||||||    
T  15565089 tgttatttaaacaaccatttggttgacaacttatttgacaacc 15565047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 42926320 - 42926266
Alignment:
Q  395 gagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||| |||||||| |||||||||||| |||  ||||||||||||||||    
T  42926320 gagtgttattttaacaaccaatttggttgacaatttatgtgacaaccataattta 42926266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 46532679 - 46532629
Alignment:
Q  399 gttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||| |||||||||||||||   ||||||||||||||||    
T  46532679 gttatttgaacaaccaatttggttgacaacttttgtgacaaccataattta 46532629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 557
Target Start/End: Complemental strand, 11564930 - 11564893
Alignment:
Q  520 aaagttttcacaaaataaatattcaaatatcatttatc 557  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  11564930 aaagttgtcacaaaataaatgttcaaatatcatttatc 11564893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 429
Target Start/End: Original strand, 44184455 - 44184484
Alignment:
Q  400 ttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||||||||||||||    
T  44184455 ttatttgaacaaccatttggttgacaactt 44184484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 12645799 - 12645835
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  12645799 aggagtgatatttgaacaactatttggttgacaactt 12645835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 41396905 - 41396957
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||  |||| ||||||||||||  |||||| |||||||||    
T  41396905 agtgttatttgaacaaatatttagttgacaacttatgtgacaaacataattta 41396957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 429
Target Start/End: Complemental strand, 49069422 - 49069390
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||| ||||||||||    
T  49069422 gtgttatttgaacaaccatttgattgacaactt 49069390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 2e-20; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 3281605 - 3281660
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3281605 aggagtgttatttgaacaaccatttggttgtcaacttacatgacaaccataattta 3281660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 6999352 - 6999297
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  6999352 aggagtgttatttgaacaaccatttggttgacaacttatgggacaaccataattta 6999297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 24095295 - 24095350
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  24095295 aggagtgttatttgaacatccatttggttgacaacttttatgacaaccataattta 24095350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 49761489 - 49761434
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  49761489 aggagtgttatttgaacaatcatttagttgacaacttacatgacaatcataattta 49761434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 55400181 - 55400126
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  55400181 aggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataattta 55400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 51465803 - 51465858
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  51465803 aggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataattta 51465858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 36412311 - 36412250
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttgg-ttgacaacttacatgacaaccataattta 448  Q
    |||| ||||||||||||||||||||||||||| |||||||||||   |||||||||||||||    
T  36412311 aaatgaggagtgttatttgaacaaccatttggtttgacaacttatgggacaaccataattta 36412250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 9158761 - 9158817
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||| | ||||||||||||||||  ||||||||||||||||    
T  9158761 aggagtgttatttgaacaactaatttggttgacaacttatgtgacaaccataattta 9158817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 33795613 - 33795669
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    |||| ||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  33795613 aggaatgttatttgaacaaccaatttagttgacaacttacgtgacaaccataattta 33795669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 46852021 - 46852057
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||||||||||||||||||    
T  46852021 aggagtgttatttgaacaaccatttggttgacaactt 46852057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 54195522 - 54195467
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||||||||    
T  54195522 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccataattta 54195467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 23183595 - 23183541
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattt 447  Q
    |||||||||||||||||||||||||| |||||||||||    |||||||||||||    
T  23183595 aggagtgttatttgaacaaccatttgattgacaacttattatacaaccataattt 23183541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 342
Target Start/End: Original strand, 43472714 - 43472752
Alignment:
Q  304 aagagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  43472714 aagagtattacttttcccaccctataggattctcgcgcg 43472752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 10206848 - 10206917
Alignment:
Q  379 tagttatagaaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||| ||||||  |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  10206848 tagttttagaaaagaggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 10206917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 28419105 - 28419158
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||||| ||||    
T  28419105 gagtgttatttgaacaaccaatttggtgacaacttacttgacaaccatatttta 28419158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 430
Target Start/End: Original strand, 41281610 - 41281647
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactta 430  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  41281610 aggagtgttatttgaacaatcatttggttgacaactta 41281647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 429
Target Start/End: Complemental strand, 46019641 - 46019608
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||||||||||||||||||    
T  46019641 agtgttatttgaacaaccatttggttgacaactt 46019608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 2358930 - 2358894
Alignment:
Q  306 gagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||||||||| ||||||||||||||||||||||||||    
T  2358930 gagtattacttttcccaccctataggattctcgcgcg 2358894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 24482852 - 24482888
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||||||||||||| |||||||    
T  24482852 aggagtgttatttgaacaaccatttggtttacaactt 24482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 24645531 - 24645483
Alignment:
Q  400 ttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||| ||| ||||||||||||||  |||||||||||||||||    
T  24645531 ttatttgaacatccacttggttgacaacttttatgacaaccataattta 24645483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 37927093 - 37927149
Alignment:
Q  393 aggagtgttatttgaacaacc-atttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||| ||||| ||||||||||   ||||||||||||||||    
T  37927093 aggagtgttatttgaacaaccaatttgattgacaacttgtgtgacaaccataattta 37927149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 34057842 - 34057897
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||| |||||||||||||||| ||||||||||  | |||||| ||||||||    
T  34057842 aggagtgttgtttgaacaaccatttgattgacaacttttaggacaactataattta 34057897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 36122003 - 36121948
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  36122003 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 36121948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 37411057 - 37411002
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||| ||||||||| ||    ||||||||||||||    
T  37411057 aggagtgttatttgaacaaccatttagttgacaacctatgaaacaaccataattta 37411002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 37508387 - 37508442
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  37508387 aggagtgttatttgaacaaccaatttgatgacaacttatttgacaaccatatttta 37508442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 39670986 - 39671041
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  39670986 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 39671041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 44677373 - 44677428
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  44677373 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatacttta 44677428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 50206859 - 50206914
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| |||||| |||| |||||||||||  | |||||||||||||||    
T  50206859 aggagtgttatttaaacaactatttagttgacaacttttaggacaaccataattta 50206914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 430
Target Start/End: Original strand, 55282581 - 55282616
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaactta 430  Q
    |||||||||||||| |||||||||||||||||||||    
T  55282581 gagtgttatttgaataaccatttggttgacaactta 55282616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 304 - 342
Target Start/End: Original strand, 2358053 - 2358091
Alignment:
Q  304 aagagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  2358053 aagagtattatttttcccaccctataggattctcgcgcg 2358091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 3953355 - 3953397
Alignment:
Q  384 atagaaataaggagtgttatttgaacaaccatttggttgacaa 426  Q
    |||||||  ||||||||||||||||||| ||||||||||||||    
T  3953355 atagaaaagaggagtgttatttgaacaatcatttggttgacaa 3953397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 39697112 - 39697166
Alignment:
Q  394 ggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| ||||| ||||||||||    |||||||||||||||    
T  39697112 ggagtgttatttgaacaactatttgattgacaacttttgggacaaccataattta 39697166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 1337734 - 1337787
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||| ||||||||||||||| ||||||||   |||||||||||||||    
T  1337734 gagttttattttaacaaccatttggttaacaacttatgagacaaccataattta 1337787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 52937363 - 52937310
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||| || ||    |||||||||||||||    
T  52937363 gagtgttatttgaacaaccatttggttgataatttttgagacaaccataattta 52937310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 429
Target Start/End: Original strand, 9719341 - 9719373
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||| ||||||||||    
T  9719341 gtgttatttgaacaaccatttgattgacaactt 9719373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 16675423 - 16675459
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttaca 432  Q
    |||||||||| |||||||||||| |||||||||||||    
T  16675423 agtgttatttaaacaaccatttgattgacaacttaca 16675459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 52777934 - 52777898
Alignment:
Q  306 gagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  52777934 gagtattacttttcccactctataggattctcgcgcg 52777898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 868841 - 868896
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  868841 aggagtgttatttgaacaaccatttggttgacaccttacatgataaccataattta 868896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 18141190 - 18141245
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  18141190 aggagtgttatttgaacaaccatttggttgacaacttttgtgacaaccataattta 18141245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 20822761 - 20822813
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  20822761 agtgttatttgaacaaccatttggttgacaacttttaggacaaccataattta 20822813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 32046877 - 32046825
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  32046877 agtgttatttgaacaaccatttggttgacaacttatgggacaaccataattta 32046825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 3832645 - 3832590
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||| |||||||||||   |||||||||||||||    
T  3832645 aggagtgttatttgaacaaccatttgattgacaacttatgggacaaccataattta 3832590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 13143271 - 13143326
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  13143271 aggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataattta 13143326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 26832821 - 26832773
Alignment:
Q  400 ttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  26832821 ttatttgaacaaccatttgattgacaacttatgtgacaaccataattta 26832773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 35213450 - 35213486
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||||||||||||||||||    
T  35213450 aggagtgttatttgaacaaccatttggttgacaactt 35213486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 6531069 - 6531124
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||| |||| |   |||||||||||||||    
T  6531069 aggagtgttatttgaacaaccatttggttgataactaatgggacaaccataattta 6531124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 32459405 - 32459460
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||| ||||| ||||||||||  | |||||||||||||||    
T  32459405 aggagtgttatttgaacaacaatttgattgacaacttttaggacaaccataattta 32459460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 754327 - 754360
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaa 426  Q
    ||||||||||||||||||||||||||||||||||    
T  754327 aggagtgttatttgaacaaccatttggttgacaa 754360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 1369540 - 1369487
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||| ||    |||||||||||||||    
T  1369540 gagtgttatttgaacaaccatttggttgacaatttttgagacaaccataattta 1369487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 2075343 - 2075395
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || | ||||||||||  ||||||||||||||||    
T  2075343 agtgttatttgaacaaccaatttggtgacaacttatttgacaaccataattta 2075395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 23628544 - 23628488
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| |||||||| |||||||||||| ||  |||||||||||||||||    
T  23628544 aggagtgttatttaaacaaccaatttggttgacaatttttatgacaaccataattta 23628488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 5327480 - 5327535
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  5327480 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatacttta 5327535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 31749543 - 31749492
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||| |||||| |||||||||||   |||||||||||||||    
T  31749543 gtgttatttgaacaatcatttgattgacaacttaagagacaaccataattta 31749492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 444
Target Start/End: Complemental strand, 33656949 - 33656902
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||||    
T  33656949 gtgttatttgaacaaccatttgattgacaatttatttgacaaccataa 33656902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 5028160 - 5028210
Alignment:
Q  398 tgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||| ||||||||||| ||||||   |||||||||||||||    
T  5028160 tgttatttgaacaatcatttggttgataacttatgagacaaccataattta 5028210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 2688953 - 2689009
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||||||||||| || |||||||||||||||   ||||||||||||||||    
T  2688953 aggaatgttatttgaacaatcaatttggttgacaacttttgtgacaaccataattta 2689009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 426
Target Start/End: Original strand, 6856057 - 6856085
Alignment:
Q  398 tgttatttgaacaaccatttggttgacaa 426  Q
    |||||||||||||||||||||||||||||    
T  6856057 tgttatttgaacaaccatttggttgacaa 6856085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 14986632 - 14986688
Alignment:
Q  392 aaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||| || | ||||||||||  |||||| |||| ||||    
T  14986632 aaggagtgttatttgaacaaccaatttggtgacaacttatttgacaatcatacttta 14986688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 22341067 - 22341119
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || | ||||||||||  ||||||| ||||||||    
T  22341067 agtgttatttgaacaaccaatttggtgacaacttatttgacaacaataattta 22341119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 28041702 - 28041758
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| ||||| || ||||||||||||||||| | |||||||| |||||    
T  28041702 aggagtgttattttaacaatcaatttggttgacaacttacttaacaaccatcattta 28041758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 41175595 - 41175650
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  41175595 aggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccataattta 41175650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 15952936 - 15952989
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  15952936 gagtgttatttgaacaaccatttggttgacaacttatgtgacaaccataattta 15952989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 10649617 - 10649562
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  10649617 aggagtgttatttgaacaaccatttggttgacaacttttgtgacaaccataattta 10649562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 43441920 - 43441865
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  43441920 aggagtgttatttgaacaaccatttggttgacaacttttaagacaaccataattta 43441865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 3640086 - 3640141
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||    
T  3640086 aggagtgttatttgaactaccatttagttgacaacttatgtgacaaccataattta 3640141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 8675322 - 8675377
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  8675322 aggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataattta 8675377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 429
Target Start/End: Original strand, 43213943 - 43213984
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  43213943 aaatgaggagtgttatttgaacaaccatttggttgacaactt 43213984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 32912220 - 32912184
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||||||||||||||||||    
T  32912220 aggagtgttatttgaacaaccatttggttgacaactt 32912184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 444
Target Start/End: Original strand, 6940026 - 6940089
Alignment:
Q  381 gttatagaaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    |||| |||||| ||| |||||||||||||||||||||| | |||||||||  ||||||||||||    
T  6940026 gttaaagaaatgaggtgtgttatttgaacaaccatttgatagacaacttatttgacaaccataa 6940089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 34270509 - 34270454
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||| ||    |||||||||||||||    
T  34270509 aggagtgttatttgaacaaccatttggttgacaaattttgagacaaccataattta 34270454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 189592 - 189628
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||| |||||||||||||||||    
T  189592 aggagtgttatttgaacaatcatttggttgacaactt 189628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 2224970 - 2224918
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || | ||||||||||  ||||||||||||||||    
T  2224970 agtgttatttgaacaaccaatttgatgacaacttatttgacaaccataattta 2224918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 10658993 - 10659029
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10658993 aggagtgttatttgaacaaccatttgattgacaactt 10659029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 26190608 - 26190572
Alignment:
Q  302 ataagagtattactgttcccaccctataggattctcg 338  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26190608 ataagagtattacttttcccaccctataggattctcg 26190572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 31955314 - 31955262
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||| ||||| ||||| |||||||||||||||||||| |||| ||||    
T  31955314 agtgttatttaaacaatcatttagttgacaacttacatgacaatcatatttta 31955262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 34124808 - 34124748
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||||||||||||||||||||||  ||||||| ||  | |||||||||||||||    
T  34124808 aaatgaggagtgttatttgaacaaccatttaattgacaatttttaagacaaccataattta 34124748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 42267524 - 42267472
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || | ||||||||||  ||||||||||||||||    
T  42267524 agtgttatttgaacaaccaatttgatgacaacttatttgacaaccataattta 42267472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 444
Target Start/End: Complemental strand, 18695497 - 18695450
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    |||||||||||||||||||||| | |||||||||  ||||||||||||    
T  18695497 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataa 18695450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 21943589 - 21943640
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||| |||||| ||||   ||||||||||||||||||||||||||||    
T  21943589 gtgttatttaaacaactattttaatgacaacttacatgacaaccataattta 21943640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 35098894 - 35098949
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  |||||| |||||||||    
T  35098894 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaatcataattta 35098949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 189523 - 189556
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaa 426  Q
    ||||||||||||||||||| ||||||||||||||    
T  189523 aggagtgttatttgaacaatcatttggttgacaa 189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 15478840 - 15478807
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaa 426  Q
    |||||||||||||||||||| |||||||||||||    
T  15478840 aggagtgttatttgaacaactatttggttgacaa 15478807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 429
Target Start/End: Complemental strand, 8097428 - 8097396
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||| ||||||||||    
T  8097428 gtgttatttgaacaaccatttgattgacaactt 8097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 13171243 - 13171279
Alignment:
Q  306 gagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  13171243 gagtattacttttcccactctataggattctcgcgcg 13171279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 15008442 - 15008494
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||  |||||||||||||||||  ||||||  ||||||||    
T  15008442 agtgttatttgaacaattatttggttgacaacttatgtgacaataataattta 15008494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 17402814 - 17402866
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || | ||||||||||  |||| |||||||||||    
T  17402814 agtgttatttgaacaaccaatttggtgacaacttatttgactaccataattta 17402866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 19481071 - 19481107
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  19481071 aggagtgttatttgaacaatcatttggttgataactt 19481107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 36359892 - 36359856
Alignment:
Q  306 gagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||||||||| |||||||||||||| |||||||||||    
T  36359892 gagtattacttttcccaccctatagcattctcgcgcg 36359856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 38704089 - 38704141
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||| || |||||||    |||||||||||||||    
T  38704089 agtgttatttgaacaaccatttgattaacaacttttgggacaaccataattta 38704141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 14233610 - 14233662
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  14233610 agtgttatttgaacaaccattttgttgacaacttacaagacaaccataattta 14233662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 6170812 - 6170757
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  6170812 aggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataattta 6170757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 23352796 - 23352851
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  23352796 aggagtgttatttgaacaaccatttggttgacaacttatgggacaaccataattta 23352851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 24562906 - 24562961
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  24562906 aggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataattta 24562961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 29712159 - 29712105
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29712159 aggactgttatttgaacaaccatttggttga-aacttacatgacaaccataattta 29712105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 3012741 - 3012795
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattt 447  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  3012741 aggagtgttatttgaacaaccatttggttgacaacttatgggacaaccataattt 3012795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 37105821 - 37105765
Alignment:
Q  392 aaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  37105821 aaggagtgttatttgaacaactatttggttgacaacttttgtgacaaccataattta 37105765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 6998957 - 6999012
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| |||||||||||||||||||||||  | |||||||||||||||    
T  6998957 aggagtgttatttaaacaaccatttggttgacaacttttaggacaaccataattta 6999012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 13765582 - 13765527
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  13765582 aggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataattta 13765527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 36643973 - 36644028
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||| |||   |||||||||||||||    
T  36643973 aggagtgttatttgaacaaccatttggttgacaatttatgggacaaccataattta 36644028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 444
Target Start/End: Original strand, 34431721 - 34431769
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  34431721 agtgttatttgaacaatcatttggttgataacttacgtgacaaccataa 34431769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 15270043 - 15269988
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||| |||||||||||| |||||  |||| ||||||||||||    
T  15270043 aggagtgttatttgaacatccatttggttgataacttttatgataaccataattta 15269988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 390 - 429
Target Start/End: Complemental strand, 25881729 - 25881690
Alignment:
Q  390 ataaggagtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  25881729 ataaggagtcttatttgaacaaccatttggttgacaactt 25881690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 32870008 - 32869953
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||| ||    |||||||||||||||    
T  32870008 aggagtgttatttgaacaaccatttggttgacaatttttgggacaaccataattta 32869953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 42866932 - 42866877
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| |||||||||||| | |||||||||| |||||| |||||||||    
T  42866932 aggagtgttattttaacaaccatttgatcgacaacttacgtgacaatcataattta 42866877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 36949248 - 36949210
Alignment:
Q  304 aagagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  36949248 aagagtattacttttcccaccctataggattctcgcgcg 36949210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 2563884 - 2563831
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||| |||||||||||||||||  | ||||| |||||||||    
T  2563884 gagtgttatttgaacaatcatttggttgacaacttttaggacaatcataattta 2563831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 13347705 - 13347758
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||| ||    |||||||||||||||    
T  13347705 gagtgttatttgaacaaccatttggttgacaatttttgggacaaccataattta 13347758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 429
Target Start/End: Complemental strand, 28245906 - 28245873
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||||||||||||||||||    
T  28245906 agtgttatttgaacaaccatttggttgacaactt 28245873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 430
Target Start/End: Original strand, 34119541 - 34119578
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactta 430  Q
    |||||||| |||||||||||||||||||||||||||||    
T  34119541 aggagtgtaatttgaacaaccatttggttgacaactta 34119578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 36211951 - 36212004
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||| || |||  |||||| |||||||||    
T  36211951 gagtgttatttgaacaaccatttggttgataaattatgtgacaatcataattta 36212004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 5054787 - 5054735
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| ||| |||||||||||||||||  ||||||| ||||||||    
T  5054787 agtgttatttgaataactatttggttgacaacttatgtgacaacaataattta 5054735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 41586560 - 41586612
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| ||||||||||||    ||||||||||||||    
T  41586560 agtgttatttgaacaaccatttagttgacaacttatggaacaaccataattta 41586612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 44254780 - 44254728
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||| |||||||||||   || ||||||||||||    
T  44254780 agtgttatttgaacaaccatttgattgacaacttatgggataaccataattta 44254728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 670361 - 670416
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  670361 aggagtgttatttgaacaaccaatttgatgacaacttatttgacaaccatatttta 670416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 2221175 - 2221120
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||  |||| ||||||||||||  ||| ||||||||||||    
T  2221175 aggagtgttatttgaacaataattttgttgacaacttatgtgataaccataattta 2221120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 4023239 - 4023294
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| |||||||||||||||||||| |||   ||||| |||||||||    
T  4023239 aggagtgttatttcaacaaccatttggttgacaatttatgagacaatcataattta 4023294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 430
Target Start/End: Original strand, 4138291 - 4138326
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaactta 430  Q
    |||||||||||||||||| |||||||||||||||||    
T  4138291 gagtgttatttgaacaactatttggttgacaactta 4138326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 11384908 - 11384959
Alignment:
Q  398 tgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||| ||||    
T  11384908 tgttatttgaacaaccaatttggttgacaacttacgtgacaatcatatttta 11384959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 444
Target Start/End: Complemental strand, 31389729 - 31389678
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||||    
T  31389729 aggagtgttatttgaacaaccaatttgatgacaacttatttgacaaccataa 31389678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 444
Target Start/End: Original strand, 34134663 - 34134710
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    |||||||||||||||||||||| | |||||||||  ||||||||||||    
T  34134663 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataa 34134710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 40936953 - 40937008
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||| |||||||| | |||||| |||  ||||||||||||||||    
T  40936953 aggagtgttatttgaataaccatttagctgacaatttatgtgacaaccataattta 40937008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 426
Target Start/End: Complemental strand, 7574614 - 7574584
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaa 426  Q
    |||||||||||||||||||||||||||||||    
T  7574614 agtgttatttgaacaaccatttggttgacaa 7574584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 36517384 - 36517342
Alignment:
Q  387 gaaataaggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||||||| ||||| |||| |||||    
T  36517384 gaaataaggagtgttatttgaacaactatttgattgataactt 36517342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 429
Target Start/End: Original strand, 9634328 - 9634361
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||| |||||||||||||||||    
T  9634328 agtgttatttgaacaatcatttggttgacaactt 9634361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 11167413 - 11167462
Alignment:
Q  399 gttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||| |||| ||||||  | ||||||||||||||    
T  11167413 gttatttgaacaaccatttgcttgataacttatgtaacaaccataattta 11167462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 429
Target Start/End: Complemental strand, 16677852 - 16677819
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||| |||||||||||||||||    
T  16677852 agtgttatttgaacaatcatttggttgacaactt 16677819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 22525887 - 22525940
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||| |||| |||||    |||||||||||||||    
T  22525887 gagtgttatttgaacaaccatttgattgataacttttgagacaaccataattta 22525940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 430
Target Start/End: Complemental strand, 9377633 - 9377601
Alignment:
Q  398 tgttatttgaacaaccatttggttgacaactta 430  Q
    |||||||||||||||||||| ||||||||||||    
T  9377633 tgttatttgaacaaccatttagttgacaactta 9377601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 10711906 - 10711870
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||| |||||||||| |||||    
T  10711906 aggagtgttatttgaacaactatttggttgataactt 10711870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 17898122 - 17898178
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||| |||| ||||||||||||||||   || ||||||||||||    
T  17898122 aggagtgttatttgaaccaccaatttggttgacaacttatcggataaccataattta 17898178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 28679495 - 28679443
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || | | ||||||||  ||||||||||||||||    
T  28679495 agtgttatttgaacaaccaatttggtcacaacttatttgacaaccataattta 28679443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 33780287 - 33780339
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||  | |||||||| | |||||||||| ||||    
T  33780287 agtgttatttgaacaaccatttgactaacaacttatacgacaaccatagttta 33780339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 39213659 - 39213695
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  39213659 aggagtgttatttaaacaaccatttgattgacaactt 39213695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 30439395 - 30439450
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  30439395 aggagtgttatttgaacaaccatttggttgataacttatgtgacaaccataattta 30439450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 36885377 - 36885432
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||| |||||||||   |||||||||||||||    
T  36885377 aggagtgttatttgaacaaccatttggtggacaacttatgggacaaccataattta 36885432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 448
Target Start/End: Complemental strand, 36568142 - 36568088
Alignment:
Q  394 ggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||| |||||||||||   |||||||||||||||    
T  36568142 ggagtgttatttgaacaaccatttgattgacaacttatgggacaaccataattta 36568088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 37597421 - 37597365
Alignment:
Q  392 aaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||| ||| | |||||||||||| | |||||||||||||||    
T  37597421 aaggagtgttatttgaacaatcatatagttgacaacttataagacaaccataattta 37597365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 12707332 - 12707277
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||  |||||   |||||||||||||||    
T  12707332 aggagtgttatttgaacaaccatttggttgagcacttatgggacaaccataattta 12707277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 342
Target Start/End: Complemental strand, 31520189 - 31520150
Alignment:
Q  303 taagagtattactgttcccaccctataggattctcgcgcg 342  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  31520189 taagagtattacttttcccaccctataggattctcgcgcg 31520150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 34018990 - 34018935
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||| ||||||||||||| ||||||| |  |||||||||||||||    
T  34018990 aggagtgttatttgatcaaccatttggttaacaactttcgggacaaccataattta 34018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 38234191 - 38234137
Alignment:
Q  395 gagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||| |||||||||||||||   ||||||||||||||||    
T  38234191 gagtgttatttgaacaaccaatttggttgacaacttgtgtgacaaccataattta 38234137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 4658145 - 4658198
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||  ||||||||||  | |||||||||||||||    
T  4658145 gagtgttatttgaacaaccatttaattgacaacttttaggacaaccataattta 4658198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 4994561 - 4994508
Alignment:
Q  396 agtgttatttgaacaaccat-ttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||  |||||||||||||||| ||||| ||||||||||    
T  4994561 agtgttatttgaacaaccaaattggttgacaacttacgtgacacccataattta 4994508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 41542029 - 41541984
Alignment:
Q  403 tttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||   |||||||||||||||    
T  41542029 tttgaacaaccatttggttgacaacttatgggacaaccataattta 41541984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 1871499 - 1871559
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||||||||||||||||||| || | | ||||||||  ||||||||||||||||    
T  1871499 aaatgaggagtgttatttgaacaaccaatttgattacaacttatttgacaaccataattta 1871559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 22706129 - 22706185
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| |||||||| |||| |||||||||||| |||||||||| |||||    
T  22706129 aggagtgttattttaacaaccaatttgattgacaacttacttgacaaccatcattta 22706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 28646855 - 28646799
Alignment:
Q  393 aggagtgttatttgaacaacc-atttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||| ||||| |||||||||||  ||| ||||||||||||    
T  28646855 aggagtgttatttgaacaaccaatttgattgacaacttatgtgataaccataattta 28646799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 28651439 - 28651383
Alignment:
Q  393 aggagtgttatttgaacaacc-atttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||| ||||| |||||||||||  ||| ||||||||||||    
T  28651439 aggagtgttatttgaacaaccaatttgattgacaacttatgtgataaccataattta 28651383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 29440411 - 29440467
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || |||| ||||||| |||| ||||||||||||||||    
T  29440411 aggagtgttatttgaacaatcaatttgattgacaatttacgtgacaaccataattta 29440467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 1633779 - 1633834
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  1633779 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatacttta 1633834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 444
Target Start/End: Original strand, 10644694 - 10644741
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    |||||||||||||||||||||| | |||||||||  ||||||||||||    
T  10644694 gtgttatttgaacaaccatttgatagacaacttatttgacaaccataa 10644741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 16872045 - 16872100
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||| ||||||||||||||||||||||| |||||||    |||||||||||||||    
T  16872045 aggagggttatttgaacaaccatttggttaacaacttttgggacaaccataattta 16872100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 32843831 - 32843886
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  32843831 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatacttta 32843886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 36110320 - 36110265
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  36110320 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 36110265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 42569618 - 42569673
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||| |||||||||||||||||||||||| || ||  | |||||||||||||||    
T  42569618 aggagtattatttgaacaaccatttggttgataatttttaggacaaccataattta 42569673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 426
Target Start/End: Complemental strand, 45519736 - 45519705
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaa 426  Q
    ||||||||||||||||||||||||||||||||    
T  45519736 gagtgttatttgaacaaccatttggttgacaa 45519705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 21005037 - 21004999
Alignment:
Q  304 aagagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  21005037 aagactattacttttcccaccctataggattctcgcgcg 21004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 429
Target Start/End: Original strand, 7472919 - 7472952
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||| ||||||||||||||||    
T  7472919 agtgttatttgaacaactatttggttgacaactt 7472952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 9208247 - 9208210
Alignment:
Q  393 aggagtgttatttgaacaacc-atttggttgacaactt 429  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  9208247 aggagtgttatttgaacaaccaatttggttgacaactt 9208210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 14707234 - 14707287
Alignment:
Q  395 gagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||| ||||||| |||||||||   ||||| |||||||||    
T  14707234 gagtgttatttgaacaactatttggtggacaacttatgagacaatcataattta 14707287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 342
Target Start/End: Original strand, 31519332 - 31519365
Alignment:
Q  309 tattactgttcccaccctataggattctcgcgcg 342  Q
    ||||||| ||||||||||||||||||||||||||    
T  31519332 tattacttttcccaccctataggattctcgcgcg 31519365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 429
Target Start/End: Complemental strand, 31597135 - 31597094
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttggttgacaactt 429  Q
    |||| |||||||||||||||||||||||||| |||| |||||    
T  31597135 aaatgaggagtgttatttgaacaaccatttgattgataactt 31597094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 41530519 - 41530556
Alignment:
Q  305 agagtattactgttcccaccctataggattctcgcgcg 342  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  41530519 agagtattacttttctcaccctataggattctcgcgcg 41530556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 6991696 - 6991752
Alignment:
Q  393 aggagtgttatttgaacaaccatttg-gttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || ||  |||||||||||| |||||||||||| ||||    
T  6991696 aggagtgttatttgaacaaacaattcagttgacaacttatatgacaaccatatttta 6991752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 429
Target Start/End: Original strand, 10592202 - 10592234
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaactt 429  Q
    |||||||||||||||||||||| ||||||||||    
T  10592202 gtgttatttgaacaaccatttgattgacaactt 10592234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 23792978 - 23793034
Alignment:
Q  392 aaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| ||||||||| |||||||||||||||||||| |||   |||||| ||||||||    
T  23792978 aaggggtgttatttcaacaaccatttggttgacaatttatgagacaactataattta 23793034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 447
Target Start/End: Original strand, 38708186 - 38708238
Alignment:
Q  396 agtgttatttgaacaacc-atttggttgacaacttacatgacaaccataattt 447  Q
    |||||||||||||||||| ||||| ||||||| |||  |||||||||||||||    
T  38708186 agtgttatttgaacaaccaatttgattgacaatttatgtgacaaccataattt 38708238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 42110071 - 42110127
Alignment:
Q  393 aggagtgttatttgaacaac-catttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||  |||||||||||||||||  |||| | |||||||||    
T  42110071 aggagtgttatttgaacaactaatttggttgacaacttatgtgacgatcataattta 42110127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 13104279 - 13104326
Alignment:
Q  401 tatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  13104279 tatttgaacaaccatttgattgacaacttacatgacaaccataattta 13104326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 1815890 - 1815945
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  1815890 aggagtgttatttgaacaaccatctggttgacaacttatgtgacagccataattta 1815945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 17683523 - 17683468
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  17683523 aggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataattta 17683468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 22819831 - 22819776
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  22819831 aggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataattta 22819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 56271539 - 56271487
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||| ||||||| ||||||||||  |||||||||||||||||    
T  56271539 agtgttatttgaacatccatttgtttgacaacttttatgacaaccataattta 56271487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 2999294 - 2999239
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||||||  ||||||||||  | |||||||||||||||    
T  2999294 aggagtgttatttgaacaaccatttaattgacaacttttaggacaaccataattta 2999239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 4915562 - 4915617
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| ||||||||||| ||||||||| ||||||||||| |||||||| ||||||||    
T  4915562 aggaatgttatttgaaaaaccatttgattgacaacttaaatgacaactataattta 4915617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 12799896 - 12799841
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| |||||||||||||||||||||||| ||||||||  |||||| |||||||||    
T  12799896 aggaatgttatttgaacaaccatttggttaacaacttatgtgacaatcataattta 12799841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 40609797 - 40609742
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattt 447  Q
    |||||||||||||||||||||| |||||||||||||||   |||||||||||||||    
T  40609797 aggagtgttatttgaacaaccaatttggttgacaacttttgtgacaaccataattt 40609742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 47099202 - 47099147
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||||||||||||| |||||    |||||||||||||||    
T  47099202 aggagtgttatttgaacaaccatttggttgataacttttgggacaaccataattta 47099147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 54669473 - 54669528
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||||||||    
T  54669473 aggagtgttatttgaacaaccaatttgatgacaacttatttgacaaccataattta 54669528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 429
Target Start/End: Original strand, 18882867 - 18882900
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||||||||||||||||||    
T  18882867 agtgttatttgaacaaccatttggttgacaactt 18882900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 42815593 - 42815536
Alignment:
Q  387 gaaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataa 444  Q
    ||||| ||| |||||||||||||||||||||| | |||||||||  ||||||||||||    
T  42815593 gaaatgaggtgtgttatttgaacaaccatttgatagacaacttatttgacaaccataa 42815536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 423
Target Start/End: Complemental strand, 13139331 - 13139299
Alignment:
Q  391 taaggagtgttatttgaacaaccatttggttga 423  Q
    |||||||||||||||||||||||||||||||||    
T  13139331 taaggagtgttatttgaacaaccatttggttga 13139299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 33860829 - 33860773
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    |||||| ||||||||||||||| |||| |||||||||||| ||||||| ||||||||    
T  33860829 aggagtattatttgaacaaccaatttgattgacaacttacgtgacaacgataattta 33860773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 39344869 - 39344905
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39344869 aggagtgttatttgaacaaccatttggttgataactt 39344905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 45143561 - 45143617
Alignment:
Q  392 aaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||| ||||||||||||||| ||||||||||||||||    |||||||||||||||    
T  45143561 aaggattgttatttgaacaactatttggttgacaacttttgggacaaccataattta 45143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 45152330 - 45152386
Alignment:
Q  392 aaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||| ||||||||||||||| ||||||||||||||||    |||||||||||||||    
T  45152330 aaggattgttatttgaacaactatttggttgacaacttttgggacaaccataattta 45152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 50392716 - 50392680
Alignment:
Q  306 gagtattactgttcccaccctataggattctcgcgcg 342  Q
    |||||||||| ||||||||||||||||||||||||||    
T  50392716 gagtattacttttcccaccctataggattctcgcgcg 50392680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 5932047 - 5932102
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  5932047 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 5932102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 9118753 - 9118808
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  9118753 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 9118808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 12139035 - 12138980
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| ||||||||||||||||||||| |||| ||||||  | ||||||||||||||    
T  12139035 aggaatgttatttgaacaaccatttgattgataacttatgtaacaaccataattta 12138980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 14451575 - 14451520
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  14451575 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 14451520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 30080028 - 30079973
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||| ||||||  ||||||||||||||||    
T  30080028 aggagtgttatttgaacaaccaatttggtgaaaacttatttgacaaccataattta 30079973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 32696363 - 32696308
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| ||||||||||||||||| ||||| |||||||||   |||||||||||||||    
T  32696363 aggaatgttatttgaacaaccaattggtggacaacttaagggacaaccataattta 32696308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 34972731 - 34972766
Alignment:
Q  307 agtattactgttcccaccctataggattctcgcgcg 342  Q
    ||||||||| ||||||||||||||||||||||||||    
T  34972731 agtattacttttcccaccctataggattctcgcgcg 34972766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 41486032 - 41486087
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  41486032 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 41486087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 43769893 - 43769838
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||| |||| ||||| ||||||   |||||||||||||||    
T  43769893 aggagtgttatttgaacaactattttgttgataacttatgcgacaaccataattta 43769838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 47965919 - 47965864
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  47965919 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 47965864  T

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Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 51194451 - 51194396
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  51194451 aggagtgttatttgaacaaccaatttgatgacaacttatttgacaaccatatttta 51194396  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 53152210 - 53152265
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  53152210 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatacttta 53152265  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 447
Target Start/End: Complemental strand, 42491252 - 42491202
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataattt 447  Q
    |||||||||||||||||||||| ||||||||||    ||||||||||||||    
T  42491252 gtgttatttgaacaaccatttgattgacaacttttgggacaaccataattt 42491202  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 50831648 - 50831698
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaacttacatgacaaccataattt 447  Q
    |||||||||||||||||||||| ||||||||||    ||||||||||||||    
T  50831648 gtgttatttgaacaaccatttgattgacaacttttgggacaaccataattt 50831698  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 51887844 - 51887791
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattt 447  Q
    ||||||||||||||||||||| |||  ||||||||||| | ||||||||||||||    
T  51887844 aggagtgttatttgaacaacc-tttaattgacaacttataggacaaccataattt 51887791  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 23524508 - 23524475
Alignment:
Q  306 gagtattactgttcccaccctataggattctcgc 339  Q
    |||||||||| |||||||||||||||||||||||    
T  23524508 gagtattacttttcccaccctataggattctcgc 23524475  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 31657828 - 31657795
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaa 426  Q
    ||||||||||||| ||||||||||||||||||||    
T  31657828 aggagtgttatttaaacaaccatttggttgacaa 31657795  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 426
Target Start/End: Original strand, 32696681 - 32696710
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaa 426  Q
    ||||||||||||||||||||||||||||||    
T  32696681 gtgttatttgaacaaccatttggttgacaa 32696710  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 430
Target Start/End: Complemental strand, 52895435 - 52895402
Alignment:
Q  397 gtgttatttgaacaaccatttggttgacaactta 430  Q
    |||||||||||||||||||||| |||||||||||    
T  52895435 gtgttatttgaacaaccatttgattgacaactta 52895402  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 53647316 - 53647369
Alignment:
Q  396 agtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    |||| ||||||||||| || ||||||||||||||||  ||||||||||||||||    
T  53647316 agtgatatttgaacaatcaatttggttgacaacttatgtgacaaccataattta 53647369  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 17476063 - 17476003
Alignment:
Q  388 aaataaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||| ||||||||||||||||||| || || | ||||||||||  |||||| |||||||||    
T  17476063 aaatgaggagtgttatttgaacaatcaatttggtgacaacttatttgacaatcataattta 17476003  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 391 - 423
Target Start/End: Complemental strand, 26718552 - 26718520
Alignment:
Q  391 taaggagtgttatttgaacaaccatttggttga 423  Q
    |||||||||||||||||| ||||||||||||||    
T  26718552 taaggagtgttatttgaataaccatttggttga 26718520  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 391 - 423
Target Start/End: Complemental strand, 26731180 - 26731148
Alignment:
Q  391 taaggagtgttatttgaacaaccatttggttga 423  Q
    |||||||||||||||||| ||||||||||||||    
T  26731180 taaggagtgttatttgaataaccatttggttga 26731148  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 31076232 - 31076180
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||| |||||||| || | ||||||||||  ||||||||||||||||    
T  31076232 agtgttatttaaacaaccaatttggtgacaacttatttgacaaccataattta 31076180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 33899218 - 33899270
Alignment:
Q  396 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  33899218 agtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 33899270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 447
Target Start/End: Original strand, 38380979 - 38381019
Alignment:
Q  407 aacaaccatttggttgacaacttacatgacaaccataattt 447  Q
    |||||||||||||||||||||||  | ||||||||||||||    
T  38380979 aacaaccatttggttgacaacttttaagacaaccataattt 38381019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 42667388 - 42667332
Alignment:
Q  393 aggagtgttatttgaacaacca-tttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||| ||||| || ||||||||||||||||   |||||||||||||||    
T  42667388 aggagtgttatttaaacaatcaatttggttgacaacttatgcgacaaccataattta 42667332  T

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Target: scaffold0532 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 11146 - 11091
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||| |||||||||    
T  11146 aggagtgttatttgaacaaccttttggttgacaacttatgtgacaatcataattta 11091  T

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Target: scaffold0141 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 12114 - 12059
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||| ||||||||||||||||    |||||||||||||||    
T  12114 aggagtgttatttgaacaactatttggttgacaacttttgcgacaaccataattta 12059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 38607 - 38571
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaactt 429  Q
    ||||||||||||||||||||||||| |||||||||||    
T  38607 aggagtgttatttgaacaaccatttagttgacaactt 38571  T

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Target: scaffold0471 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 189 - 134
Alignment:
Q  393 aggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataattta 448  Q
    |||||||||||||||||||||| || | ||||||||||  ||||||||||| ||||    
T  189 aggagtgttatttgaacaaccaatttggtgacaacttatttgacaaccatatttta 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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