View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8307_high_3 (Length: 486)
Name: NF8307_high_3
Description: NF8307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8307_high_3 |
 |  |
|
| [»] scaffold0078 (2 HSPs) |
 |  |  |
|
| [»] scaffold0702 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 20)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 169 - 470
Target Start/End: Complemental strand, 922758 - 922454
Alignment:
| Q |
169 |
tagatttagtcaaaagtgtaggtcattctaatggataatacaaccgtaatcaaccctaataaacaaacaccagacacaggtacaacccaacgaactcgca |
268 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
922758 |
tagatttagtcaaaagtgtaggtcattctaatggataatacaactgtaatcaaccctaataaacaaacactagacacaggtacaacccaacgaactcgca |
922659 |
T |
 |
| Q |
269 |
tacatgaaattgaaagnnnnnnnn---tggtgataactattttcaagcacaaaactagatcttcataaaatctgacaaagcgtttggagcggcaatgagt |
365 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||| | |
|
|
| T |
922658 |
tacatgaaattgaaaaggaaaaaaaaatggtgataactattttcaagcacaaaactagatctttataaaatctaacgaagcgtttggagcggcaatgact |
922559 |
T |
 |
| Q |
366 |
taaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctcttctacatctaacgtttgc |
465 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
922558 |
taaacgtctaggatccgctaaaagagagacaccacactcttatccaaacccctaagacaatgggtttatgggtctcctctcttctatatctaacgtttgc |
922459 |
T |
 |
| Q |
466 |
ttcat |
470 |
Q |
| |
|
||||| |
|
|
| T |
922458 |
ttcat |
922454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 922904 - 922841
Alignment:
| Q |
19 |
tatattatacattatccgtgtgtaaatgtctgagtctaagtccatctttcatagatcaaaacat |
82 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
922904 |
tatattatacattatccgtgtgtaaatgtctgagtctaagtccatctttcatagatcaaaacat |
922841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 11197388 - 11197269
Alignment:
| Q |
344 |
agcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcct |
443 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||| | |||| |||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| |
|
|
| T |
11197388 |
agcgtttggagcggcaatgggctaaacacctaggaccagctaagagagagacaccacactcttacccaaaaccctaaggcaatgggtttatgggtctcct |
11197289 |
T |
 |
| Q |
444 |
ctcttctacatctaacgttt |
463 |
Q |
| |
|
||||| || ||| ||||||| |
|
|
| T |
11197288 |
ctcttatatatccaacgttt |
11197269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 10396286 - 10396189
Alignment:
| Q |
351 |
ggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctctt |
448 |
Q |
| |
|
|||||||||| ||| |||||||||| || || |||| ||||||||||||| |||||| | ||| |||| || |||||||||||||||||| ||||||| |
|
|
| T |
10396286 |
ggagcggcaacgagctaaacgtctatgacccgctaagagagagacaccaccctcttacctaaaaccctaaggcaatgggtttatgggtcttctctctt |
10396189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 10396534 - 10396474
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctctt |
448 |
Q |
| |
|
||||||| |||||||||||||||||| |||| || |||||||||||||||||||||||||| |
|
|
| T |
10396534 |
agagagagaccacactcttatccaaaaccctaaggcaatgggtttatgggtctcctctctt |
10396474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 447
Target Start/End: Complemental strand, 11197098 - 11196995
Alignment:
| Q |
344 |
agcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcct |
443 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||| | |||| ||||||||||| |||||||| | ||| ||| || ||||||||||| ||||||||| |
|
|
| T |
11197098 |
agcgtttggagcggcaatgggctaaacacctaggaccagctaagagagagacacctcactcttacctaaaatcctaaggcaatgggtttaagggtctcct |
11196999 |
T |
 |
| Q |
444 |
ctct |
447 |
Q |
| |
|
|||| |
|
|
| T |
11196998 |
ctct |
11196995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 34946393 - 34946456
Alignment:
| Q |
343 |
aagcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactctt |
406 |
Q |
| |
|
||||| ||||||||||||| | ||||||||||||| ||||||| |||||||||| |||||||| |
|
|
| T |
34946393 |
aagcgcttggagcggcaataggctaaacgtctaggacccactaagagagagacactacactctt |
34946456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 50002545 - 50002493
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | ||||||||| |||||||||| |
|
|
| T |
50002545 |
aagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtc |
50002493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 50630792 - 50630844
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
50630792 |
aagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
50630844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 439
Target Start/End: Original strand, 22183302 - 22183353
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||||| ||||||||||||||||| || | || ||||||||||||||||| |
|
|
| T |
22183302 |
agagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtc |
22183353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 439
Target Start/End: Complemental strand, 54936314 - 54936263
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||||||||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
54936314 |
agagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
54936263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Complemental strand, 25483455 - 25483406
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgg |
436 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || |||||||||||||| |
|
|
| T |
25483455 |
aagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgg |
25483406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 18932786 - 18932838
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| | ||| || | || ||||||||||||||||| |
|
|
| T |
18932786 |
aagagagacaccacactcttacctaaaaccttaaggcaatgggtttatgggtc |
18932838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 22028406 - 22028458
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| | | |||||||| ||||||||||| |
|
|
| T |
22028406 |
aagagagacaccacactcttacccaaaacattaagacaatgagtttatgggtc |
22028458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 36608699 - 36608747
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgg |
436 |
Q |
| |
|
|||||||||||||||||||| ||||| || | ||||||||| ||||||| |
|
|
| T |
36608699 |
agagagacaccacactcttacccaaaaccttaagacaatggatttatgg |
36608747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 36629356 - 36629304
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || ||||| ||||||||||| |
|
|
| T |
36629356 |
aagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtc |
36629304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 415
Target Start/End: Complemental strand, 43827558 - 43827530
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacc |
415 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
43827558 |
aagagagacaccacactcttatccaaacc |
43827530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 45496924 - 45496872
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | |||||||| |||||| |||| |
|
|
| T |
45496924 |
aagagagacaccacactcttacccaaaaccttaagacaatgagtttataggtc |
45496872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 49303025 - 49302973
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||| |||||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
49303025 |
aagagatacaccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
49302973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 55933161 - 55933213
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| | | || ||||||||||||||||| |
|
|
| T |
55933161 |
aagagagacaccacactcttacccaaaactttaaggcaatgggtttatgggtc |
55933213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 349 - 448
Target Start/End: Original strand, 21416142 - 21416241
Alignment:
| Q |
349 |
ttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctctt |
448 |
Q |
| |
|
|||||||||||||| ||||| ||||||| || |||| |||||||||||||||||||| ||||| |||| || |||||||||||||||||||||||||| |
|
|
| T |
21416142 |
ttggagcggcaatggactaaacatctaggacccgctaagagagagacaccacactcttacccaaaaccctaaggcaatgggtttatgggtctcctctctt |
21416241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 353 - 445
Target Start/End: Original strand, 23569007 - 23569099
Alignment:
| Q |
353 |
agcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctct |
445 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||| |||||||| |||||||||| ||||| || | || ||||||||||||||| ||||||| |
|
|
| T |
23569007 |
agcggcaatgagctaaacgtctaggacccactaaatgagagacatcacactcttacccaaaaccttaaggcaatgggtttatgggcctcctct |
23569099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 448
Target Start/End: Original strand, 21416426 - 21416531
Alignment:
| Q |
343 |
aagcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcc |
442 |
Q |
| |
|
||||| |||||||| ||||| ||| ||| ||||||| || |||| |||||||||||||| ||||| ||||| ||| |||||| | |||||||||||||| |
|
|
| T |
21416426 |
aagcgcttggagcgacaatgggttgaacatctaggacccgctaagagagagacaccacattcttacccaaaacccaaagacaacgagtttatgggtctcc |
21416525 |
T |
 |
| Q |
443 |
tctctt |
448 |
Q |
| |
|
||||| |
|
|
| T |
21416526 |
gctctt |
21416531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 27598092 - 27598025
Alignment:
| Q |
399 |
acactcttatccaaacccctgagacaatgggtttatgggtctcctctcttctacatctaacgtttgct |
466 |
Q |
| |
|
||||||||| |||| |||| ||||||||||||||||||||||||||||| || ||| |||||||||| |
|
|
| T |
27598092 |
acactcttacgcaaaaccctaagacaatgggtttatgggtctcctctcttatatatccaacgtttgct |
27598025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 11845310 - 11845258
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||||||||| || | || |||||| |||||||||| |
|
|
| T |
11845310 |
aagagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtc |
11845258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 14681627 - 14681579
Alignment:
| Q |
389 |
gagagacaccacactcttatccaaacccctgagacaatgggtttatggg |
437 |
Q |
| |
|
||||||||||||||||||| ||||| || | |||||||||||||||||| |
|
|
| T |
14681627 |
gagagacaccacactcttacccaaaaccttaagacaatgggtttatggg |
14681579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 435
Target Start/End: Original strand, 34218074 - 34218121
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatg |
435 |
Q |
| |
|
|||||||||||||||||||| ||||| || | |||||||||||||||| |
|
|
| T |
34218074 |
agagagacaccacactcttacccaaaaccttaagacaatgggtttatg |
34218121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Complemental strand, 9901762 - 9901713
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgg |
436 |
Q |
| |
|
||||||||||||||||||||| ||||| || | |||||||| |||||||| |
|
|
| T |
9901762 |
aagagagacaccacactcttacccaaaaccttaagacaatgagtttatgg |
9901713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 23416 - 23468
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || |||| |||||||||||| |
|
|
| T |
23416 |
aagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtc |
23468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 1085655 - 1085707
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||| ||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
1085655 |
aagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
1085707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 29157684 - 29157632
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || |||||| |||||||||| |
|
|
| T |
29157684 |
aagagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtc |
29157632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 30245196 - 30245144
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || ||||| ||||||||||| |
|
|
| T |
30245196 |
aagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtc |
30245144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 40094813 - 40094865
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||| ||||||||||| ||||| || | |||| ||||||||||||||| |
|
|
| T |
40094813 |
aagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtc |
40094865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 13042662 - 13042579
Alignment:
| Q |
383 |
ctaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctcttctacatctaacgtttgct |
466 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || | || |||||||||||||||||||||||||| || |||||| ||||||| |
|
|
| T |
13042662 |
ctaagagagagacaccacactcttatccaaaaccttaaggcaatgggtttatgggtctcctctcttatatatctaatgtttgct |
13042579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 13112660 - 13112577
Alignment:
| Q |
383 |
ctaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctcttctacatctaacgtttgct |
466 |
Q |
| |
|
|||| ||| |||||||||||||||||||||| || | ||||||||||||||||||||||||||||| || |||||| ||||||| |
|
|
| T |
13112660 |
ctaagagaaagacaccacactcttatccaaaaccttaagacaatgggtttatgggtctcctctcttatatatctaatgtttgct |
13112577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 458
Target Start/End: Complemental strand, 13042416 - 13042302
Alignment:
| Q |
344 |
agcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcct |
443 |
Q |
| |
|
|||| |||||||| ||||| ||||||||||||||| || |||| ||||||||| |||||||||| | ||| | || |||| |||||||| |||||||||| |
|
|
| T |
13042416 |
agcgcttggagcgacaatgggttaaacgtctaggacccgctaagagagagacatcacactcttaccaaaaactctaagacgatgggtttttgggtctcct |
13042317 |
T |
 |
| Q |
444 |
ctcttctacatctaa |
458 |
Q |
| |
|
| ||| || |||||| |
|
|
| T |
13042316 |
cacttatatatctaa |
13042302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 458
Target Start/End: Complemental strand, 13112410 - 13112296
Alignment:
| Q |
344 |
agcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcct |
443 |
Q |
| |
|
|||| |||||||| ||||| ||||||||||||||| || |||| ||||||||| |||||||||| | ||| | || |||| |||||||| |||||||||| |
|
|
| T |
13112410 |
agcgcttggagcgacaatgggttaaacgtctaggacccgctaagagagagacatcacactcttaccaaaaactctaagacgatgggtttttgggtctcct |
13112311 |
T |
 |
| Q |
444 |
ctcttctacatctaa |
458 |
Q |
| |
|
| ||| || |||||| |
|
|
| T |
13112310 |
cacttatatatctaa |
13112296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 466
Target Start/End: Complemental strand, 13043158 - 13043036
Alignment:
| Q |
344 |
agcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcct |
443 |
Q |
| |
|
|||| ||||||| |||||| | |||| |||||||| | |||| |||||||||||| |||||| ||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
13043158 |
agcgcttggagcagcaatgggctaaatgtctaggacctgctaagagagagacaccaatctcttacccaaaatcctaagatgatgggtttatgggtctcct |
13043059 |
T |
 |
| Q |
444 |
ctcttctacatctaacgtttgct |
466 |
Q |
| |
|
||||| || ||| || ||||||| |
|
|
| T |
13043058 |
ctcttatatatccaatgtttgct |
13043036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 466
Target Start/End: Complemental strand, 13113154 - 13113032
Alignment:
| Q |
344 |
agcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcct |
443 |
Q |
| |
|
|||| ||||||| |||||| | |||| |||||||| | |||| |||||||||||| |||||| ||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
13113154 |
agcgcttggagcagcaatgggctaaatgtctaggacctgctaagagagagacaccaatctcttacccaaaatcctaagatgatgggtttatgggtctcct |
13113055 |
T |
 |
| Q |
444 |
ctcttctacatctaacgtttgct |
466 |
Q |
| |
|
||||| || ||| || ||||||| |
|
|
| T |
13113054 |
ctcttatatatccaatgtttgct |
13113032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 427
Target Start/End: Original strand, 36389277 - 36389359
Alignment:
| Q |
344 |
agcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatg |
427 |
Q |
| |
|
|||| |||||||||||||| |||||||||| |||| ||||||||||||||||| ||||| ||| ||||| |||| || ||||| |
|
|
| T |
36389277 |
agcgcttggagcggcaatg-gttaaacgtccaggacccactaaaagagagacatcacaccgttacccaaaaccctaaggcaatg |
36389359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 6500941 - 6500889
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||||||||| || | || ||||| ||||||||||| |
|
|
| T |
6500941 |
aagagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtc |
6500889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 439
Target Start/End: Complemental strand, 26074730 - 26074679
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||||||||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
26074730 |
agagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
26074679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 441
Target Start/End: Complemental strand, 35150124 - 35150071
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctc |
441 |
Q |
| |
|
|||||||||||||||| ||| ||||| || | ||||||||| |||||||||||| |
|
|
| T |
35150124 |
agagagacaccacacttttacccaaaaccttaagacaatggatttatgggtctc |
35150071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 36388980 - 36389073
Alignment:
| Q |
352 |
gagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctct |
445 |
Q |
| |
|
||||||||||| | |||| ||||| || | |||| ||||| |||||||||||| | ||||| |||| || || || ||||||||||||||||| |
|
|
| T |
36388980 |
gagcggcaatgcgctaaatgtctaagaccagctaagagagaaacaccacactctgacccaaaaccctaaggcactgagtttatgggtctcctct |
36389073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 9498693 - 9498745
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| | | || ||||||||||||||||| |
|
|
| T |
9498693 |
aagagagacaccacactcttacccaaaatcttaaggcaatgggtttatgggtc |
9498745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 40296354 - 40296406
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || || ||||||||||||||||| |
|
|
| T |
40296354 |
aagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtc |
40296406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 469
Target Start/End: Original strand, 11637729 - 11637842
Alignment:
| Q |
356 |
ggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctcttctacatc |
455 |
Q |
| |
|
||||||| | |||| || |||||||| ||| ||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||||| || || |
|
|
| T |
11637729 |
ggcaatgggctaaatgtttaggatccgctataagagagacaccacactcttatccaaaatcttaagacaatgggtttatgggtatcctctcttatatatt |
11637828 |
T |
 |
| Q |
456 |
taacgtttgcttca |
469 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
11637829 |
caatgtttgcttca |
11637842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 430
Target Start/End: Original strand, 11638016 - 11638095
Alignment:
| Q |
351 |
ggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggt |
430 |
Q |
| |
|
||||||| |||| ||||||||||||||| || | || |||||||||||| ||||||| ||||| ||| || |||||||| |
|
|
| T |
11638016 |
ggagcggtaatgggttaaacgtctaggacccgcaaagagagagacaccatactcttacccaaaatcctaaggcaatgggt |
11638095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Complemental strand, 3058345 - 3058296
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgg |
436 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || |||||||||||||| |
|
|
| T |
3058345 |
aagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgg |
3058296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 1846864 - 1846816
Alignment:
| Q |
390 |
agagacaccacactcttatccaaacccctgagacaatgggtttatgggt |
438 |
Q |
| |
|
|||||||||||||||||||||||| || | || |||||| ||||||||| |
|
|
| T |
1846864 |
agagacaccacactcttatccaaaaccttaaggcaatggatttatgggt |
1846816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 2377873 - 2377821
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||| |||||||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
2377873 |
aagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
2377821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 3409378 - 3409326
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || ||||| ||||||||||| |
|
|
| T |
3409378 |
aagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtc |
3409326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 3415577 - 3415525
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| | ||| || | || ||||||||||||||||| |
|
|
| T |
3415577 |
aagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtc |
3415525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 16107797 - 16107749
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatg |
435 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || ||||||||||||| |
|
|
| T |
16107797 |
aagagagacaccacactcttacccaaaaccttaaggcaatgggtttatg |
16107749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 16454694 - 16454642
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||| ||||||||||||||||| | | || ||||||||||||||||| |
|
|
| T |
16454694 |
aagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtc |
16454642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 29518622 - 29518570
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || |||||||||||||||| |
|
|
| T |
29518622 |
aagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtc |
29518570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 29519039 - 29518987
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || |||||||||||||||| |
|
|
| T |
29519039 |
aagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtc |
29518987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 32741298 - 32741246
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || |||||||||||||||| |
|
|
| T |
32741298 |
aagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtc |
32741246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 448
Target Start/End: Original strand, 18829838 - 18829942
Alignment:
| Q |
344 |
agcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcct |
443 |
Q |
| |
|
|||| |||||||||||||| | ||||||||||||| || |||| ||| ||| |||||||||||||||||| ||| || |||||||||||| ||| | || |
|
|
| T |
18829838 |
agcgcttggagcggcaatgggctaaacgtctaggacccgctaagagaaagataccacactcttatccaaaatcctaaggcaatgggtttataggtttact |
18829937 |
T |
 |
| Q |
444 |
ctctt |
448 |
Q |
| |
|
||||| |
|
|
| T |
18829938 |
ctctt |
18829942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 3671143 - 3671256
Alignment:
| Q |
350 |
tggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctcttc |
449 |
Q |
| |
|
||||||||||||||| ||| ||||| || || |||| |||||||||||| ||| ||||||||| |||| || || | ||||||||| ||||||||||| |
|
|
| T |
3671143 |
tggagcggcaatgagcgaaatgtctaagacccgctaagagagagacaccaaactattatccaaaaccctaaggcagtaggtttatggttctcctctctta |
3671242 |
T |
 |
| Q |
450 |
tacatctaacgttt |
463 |
Q |
| |
|
|| ||| ||||||| |
|
|
| T |
3671243 |
tatatccaacgttt |
3671256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 9483229 - 9483278
Alignment:
| Q |
390 |
agagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||||||||||||||| ||||| || | |||||||||||||||||||| |
|
|
| T |
9483229 |
agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtc |
9483278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 3670800 - 3670914
Alignment:
| Q |
349 |
ttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctctt |
448 |
Q |
| |
|
||||||||| || | || ||||||||| || || | || |||||||||||||| | ||||||||| |||| || | ||| |||||||||||| |||||| |
|
|
| T |
3670800 |
ttggagcggtaacgggtgaaacgtctaagacccgccaagagagagacaccacattattatccaaaaccctaaggtagtggatttatgggtctcatctctt |
3670899 |
T |
 |
| Q |
449 |
ctacatctaacgttt |
463 |
Q |
| |
|
|| ||| ||||||| |
|
|
| T |
3670900 |
atatatccaacgttt |
3670914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 30441204 - 30441154
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatggg |
437 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || ||||||||||||||| |
|
|
| T |
30441204 |
aagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggg |
30441154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 30359391 - 30359338
Alignment:
| Q |
386 |
aaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||||||||||||||||||| ||||| || | || | ||||||||||||||| |
|
|
| T |
30359391 |
aaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtc |
30359338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 5915986 - 5915934
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || ||||| ||||||||||| |
|
|
| T |
5915986 |
aagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtc |
5915934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 6876901 - 6876953
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||| |||||||||||||| ||||| |||| |||||||| || |||||||| |
|
|
| T |
6876901 |
aagagaaacaccacactcttacccaaaaccctaagacaatgagtgtatgggtc |
6876953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 20870612 - 20870664
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||||||||| | | || || |||||||||||||| |
|
|
| T |
20870612 |
aagagagacaccacactcttatccaaaatcttaaggcagtgggtttatgggtc |
20870664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 8e-16; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 352 - 463
Target Start/End: Original strand, 48127819 - 48127930
Alignment:
| Q |
352 |
gagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctcttcta |
451 |
Q |
| |
|
||||||||||| ||||||||||||| | |||| ||| |||||||||||||||||||||| | | | |||||||||||||||||||||||||| || |
|
|
| T |
48127819 |
gagcggcaatggactaaacgtctaggaccatctaagagaaagacaccacactcttatccaaaacattaaagcaatgggtttatgggtctcctctcttata |
48127918 |
T |
 |
| Q |
452 |
catctaacgttt |
463 |
Q |
| |
|
||| ||||||| |
|
|
| T |
48127919 |
tatcaaacgttt |
48127930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 48127605 - 48127667
Alignment:
| Q |
351 |
ggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaa |
413 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||| ||| ||||||||||||||| |||| ||||| |
|
|
| T |
48127605 |
ggagtggcaatgggttaaacgtctaggatccattaagagagagacaccacacacttacccaaa |
48127667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 53596625 - 53596539
Alignment:
| Q |
356 |
ggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcc |
442 |
Q |
| |
|
||||||||| ||||||||||||| || ||| |||||||||||||||||||| | ||| | | || |||||||||||||||||||| |
|
|
| T |
53596625 |
ggcaatgagctaaacgtctaggacccgctatgagagagacaccacactcttacctaaaatcttaagtcaatgggtttatgggtctcc |
53596539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 12114601 - 12114653
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | |||||||||||||||||||| |
|
|
| T |
12114601 |
aagagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtc |
12114653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 22303994 - 22304046
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||||||||| || | || ||||||||||||||||| |
|
|
| T |
22303994 |
aagagagacaccacactcttatccaaaaccttaaggcaatgggtttatgggtc |
22304046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 448
Target Start/End: Complemental strand, 53596100 - 53596018
Alignment:
| Q |
366 |
taaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctctt |
448 |
Q |
| |
|
||||| |||||||||| || |||||||||||||||||||| ||||| || | || || |||||||||||||||||||||| |
|
|
| T |
53596100 |
taaacatctaggatccgttatgagagagacaccacactcttacccaaaaccttaaggtaacgggtttatgggtctcctctctt |
53596018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 448
Target Start/End: Complemental strand, 53596415 - 53596333
Alignment:
| Q |
366 |
taaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctctt |
448 |
Q |
| |
|
||||| |||||||||| || |||||||||||||||||||| ||||| || | || || |||||||||||||||||||||| |
|
|
| T |
53596415 |
taaacatctaggatccgttatgagagagacaccacactcttacccaaaaccttaaggtaacgggtttatgggtctcctctctt |
53596333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 39389186 - 39389137
Alignment:
| Q |
390 |
agagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||||||||||||||| ||||| || | |||||||||||||||||||| |
|
|
| T |
39389186 |
agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtc |
39389137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 29644941 - 29644993
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||| ||||||||||| ||||| || | |||||||||||||||||||| |
|
|
| T |
29644941 |
aagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtc |
29644993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 29644620 - 29644671
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggt |
438 |
Q |
| |
|
||||||||| ||||||||||| ||||| || | ||||||||||||||||||| |
|
|
| T |
29644620 |
aagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggt |
29644671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 15772973 - 15772921
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||||||||| || | | ||||| ||||||||||| |
|
|
| T |
15772973 |
aagagagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtc |
15772921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 22303698 - 22303750
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||| |||||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
22303698 |
aagagaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
22303750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 22304688 - 22304636
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || ||||| ||||||||||| |
|
|
| T |
22304688 |
aagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtc |
22304636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 45395693 - 45395741
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgg |
436 |
Q |
| |
|
|||||||||||||||||||| ||||| | | ||||||||||||||||| |
|
|
| T |
45395693 |
agagagacaccacactcttacccaaaacattaagacaatgggtttatgg |
45395741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 388 - 463
Target Start/End: Complemental strand, 28226455 - 28226380
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctcttctacatctaacgttt |
463 |
Q |
| |
|
|||||||||||||||||||| | ||| |||| |||||||| |||||||||||||||||||| || ||| ||||||| |
|
|
| T |
28226455 |
agagagacaccacactcttacctaaaaccctaagacaatgtgtttatgggtctcctctcttatatatccaacgttt |
28226380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 349 - 448
Target Start/End: Complemental strand, 28226811 - 28226713
Alignment:
| Q |
349 |
ttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctctt |
448 |
Q |
| |
|
|||||| | ||||| | |||||||||||||||| || |||||||||||||||||||| ||||| ||| |||||||||||||||| |||||||||||| |
|
|
| T |
28226811 |
ttggagtgacaatgtgctaaacgtctaggatccgtaaagagagagacaccacactctta-ccaaaaacctaagacaatgggtttatgagtctcctctctt |
28226713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 15511534 - 15511586
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| | | |||||||||||||||||||| |
|
|
| T |
15511534 |
aagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtc |
15511586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 445
Target Start/End: Original strand, 22062795 - 22062891
Alignment:
| Q |
349 |
ttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctct |
445 |
Q |
| |
|
|||||||||||||||| ||||| | ||||| || ||| ||||| |||||||||||||| ||||| || | | ||||| |||||||||||| |||| |
|
|
| T |
22062795 |
ttggagcggcaatgagctaaacatttaggacccgttaagagagaaacaccacactcttacccaaaaccataaaacaataagtttatgggtcttctct |
22062891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 30219925 - 30219981
Alignment:
| Q |
392 |
agacaccacactcttatccaaacccctgagacaatgggtttatgggtctcctctctt |
448 |
Q |
| |
|
||||||||||||| || |||| |||| ||||||| ||||||||||||||||||||| |
|
|
| T |
30219925 |
agacaccacactcctacacaaaaccctaagacaattggtttatgggtctcctctctt |
30219981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 36178644 - 36178696
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
36178644 |
aagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
36178696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 962717 - 962665
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||| |||| |||||||||| ||||| || | |||||||||||||||||||| |
|
|
| T |
962717 |
aagagtgacaacacactcttacccaaaaccttaagacaatgggtttatgggtc |
962665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 14745333 - 14745385
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||| ||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
14745333 |
aagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
14745385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 14745706 - 14745758
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||| ||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
14745706 |
aagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
14745758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 15880382 - 15880330
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||| ||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
15880382 |
aagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
15880330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 463
Target Start/End: Original strand, 35448613 - 35448730
Alignment:
| Q |
344 |
agcgtttggagcggcaatgagttaaacgtctaggatccactaaaagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtctcct |
443 |
Q |
| |
|
|||| ||||||||||||| |||||||||| |||||||||| |||||||||| |||||||| | ||| | || || |||| ||||| |||||||| |
|
|
| T |
35448613 |
agcgcttggagcggcaatagactaaacgtctaagatccactaa--gagagacaccgcactcttaacaaaaactctaaggcaattaatttataggtctcct |
35448710 |
T |
 |
| Q |
444 |
ctcttctacatctaacgttt |
463 |
Q |
| |
|
||||| || ||| ||||||| |
|
|
| T |
35448711 |
ctcttatatatcaaacgttt |
35448730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 36784299 - 36784351
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||| ||||| ||||||||| || | |||||| ||||||||||||| |
|
|
| T |
36784299 |
aagagagacacaacacttttatccaaaaccttaagacaaagggtttatgggtc |
36784351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 5476 - 5424
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||||||||| | | || ||||||||||||||||| |
|
|
| T |
5476 |
aagagagacaccacactcttatccaaaatcttaaggcaatgggtttatgggtc |
5424 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 5100 - 5048
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgggtct |
440 |
Q |
| |
|
|||||||||||||||||||| ||||| || | || ||||| |||||||||||| |
|
|
| T |
5100 |
agagagacaccacactcttacccaaaaccataaggcaatgagtttatgggtct |
5048 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 32594755 - 32594807
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| || | |||||||| ||||||||||| |
|
|
| T |
32594755 |
aagagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtc |
32594807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 39066239 - 39066291
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||||||||| || | |||||||| |||||||||| |
|
|
| T |
39066239 |
aagagagacaccacactcttatccaaaaccttaagacaatgattttatgggtc |
39066291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 44043811 - 44043863
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
||||||||||||||||||||| ||||| | | |||||||||||||||||||| |
|
|
| T |
44043811 |
aagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtc |
44043863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 439
Target Start/End: Complemental strand, 17294695 - 17294644
Alignment:
| Q |
388 |
agagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||||||||||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
17294695 |
agagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
17294644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 26661937 - 26661990
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtct |
440 |
Q |
| |
|
||||||||||||||||||||| ||||| || | || |||| ||||||||||||| |
|
|
| T |
26661937 |
aagagagacaccacactcttacccaaaaccttaaggcaatcggtttatgggtct |
26661990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Original strand, 45494013 - 45494062
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgg |
436 |
Q |
| |
|
||||||||||||||||||||||||||| | | || |||||||||||||| |
|
|
| T |
45494013 |
aagagagacaccacactcttatccaaaactttaaggcaatgggtttatgg |
45494062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 29798318 - 29798270
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatg |
435 |
Q |
| |
|
|||||||||||||||||||||||||| || | || ||||||||||||| |
|
|
| T |
29798318 |
aagagagacaccacactcttatccaagaccttaaggcaatgggtttatg |
29798270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0702 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0702
Description:
Target: scaffold0702; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 553 - 605
Alignment:
| Q |
387 |
aagagagacaccacactcttatccaaacccctgagacaatgggtttatgggtc |
439 |
Q |
| |
|
|||| |||||||||||||||| ||||| || | || ||||||||||||||||| |
|
|
| T |
553 |
aagaaagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtc |
605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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