View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8307_low_2 (Length: 654)

Name: NF8307_low_2
Description: NF8307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8307_low_2
NF8307_low_2
[»] chr8 (70 HSPs)
chr8 (1-551)||(16061899-16062446)
chr8 (1-189)||(16073655-16073841)
chr8 (80-351)||(16068325-16068594)
chr8 (372-511)||(4330976-4331115)
chr8 (372-513)||(24193194-24193335)
chr8 (372-511)||(4647755-4647894)
chr8 (372-511)||(19240865-19241004)
chr8 (372-511)||(19314049-19314188)
chr8 (372-512)||(17810296-17810436)
chr8 (392-512)||(32247927-32248047)
chr8 (372-514)||(29350921-29351064)
chr8 (372-509)||(9915043-9915179)
chr8 (382-511)||(19256220-19256349)
chr8 (386-511)||(25655858-25655983)
chr8 (372-512)||(8555303-8555443)
chr8 (372-511)||(3823131-3823270)
chr8 (392-511)||(24576024-24576143)
chr8 (382-511)||(11938753-11938881)
chr8 (392-512)||(27910763-27910883)
chr8 (392-512)||(27957182-27957302)
chr8 (392-511)||(19488061-19488180)
chr8 (372-511)||(21350476-21350615)
chr8 (372-511)||(33652565-33652704)
chr8 (372-511)||(43431559-43431698)
chr8 (382-511)||(24636660-24636790)
chr8 (372-513)||(6817052-6817193)
chr8 (372-512)||(17824615-17824755)
chr8 (392-512)||(31399507-31399627)
chr8 (392-511)||(18010060-18010179)
chr8 (392-511)||(27869256-27869375)
chr8 (372-511)||(32961657-32961796)
chr8 (392-513)||(22939331-22939452)
chr8 (382-511)||(30466954-30467083)
chr8 (394-511)||(30687956-30688073)
chr8 (392-511)||(13060931-13061050)
chr8 (382-512)||(5670168-5670298)
chr8 (372-511)||(17103865-17104004)
chr8 (392-511)||(23752286-23752405)
chr8 (372-511)||(40289421-40289559)
chr8 (382-511)||(25000431-25000560)
chr8 (404-512)||(8824855-8824963)
chr8 (392-512)||(25273327-25273446)
chr8 (394-511)||(21219240-21219357)
chr8 (375-512)||(29345072-29345209)
chr8 (380-511)||(9631409-9631541)
chr8 (372-511)||(6816383-6816522)
chr8 (372-472)||(5879202-5879302)
chr8 (392-511)||(33412977-33413089)
chr8 (396-511)||(10917849-10917964)
chr8 (56-169)||(16094762-16094876)
chr8 (431-513)||(25274654-25274736)
chr8 (392-486)||(26399032-26399126)
chr8 (392-504)||(14304247-14304359)
chr8 (392-511)||(15251620-15251738)
chr8 (407-512)||(8789873-8789978)
chr8 (404-478)||(19493688-19493762)
chr8 (372-509)||(37992097-37992234)
chr8 (392-512)||(31344171-31344291)
chr8 (372-511)||(18844544-18844683)
chr8 (445-511)||(42700657-42700723)
chr8 (395-511)||(6084246-6084360)
chr8 (238-301)||(16094569-16094632)
chr8 (392-511)||(17003280-17003399)
chr8 (411-481)||(15289679-15289749)
chr8 (411-481)||(15470048-15470118)
chr8 (392-481)||(29473330-29473419)
chr8 (392-481)||(41527730-41527819)
chr8 (396-468)||(3692214-3692286)
chr8 (447-511)||(24479813-24479877)
chr8 (394-434)||(24479875-24479915)
[»] chr7 (65 HSPs)
chr7 (372-511)||(11036507-11036646)
chr7 (372-511)||(20429465-20429604)
chr7 (372-511)||(20174020-20174159)
chr7 (372-517)||(37135279-37135424)
chr7 (372-513)||(22486394-22486535)
chr7 (372-512)||(27806018-27806158)
chr7 (372-511)||(23699825-23699964)
chr7 (372-511)||(28800878-28801017)
chr7 (372-513)||(18217829-18217970)
chr7 (372-513)||(23750734-23750875)
chr7 (372-512)||(21917333-21917473)
chr7 (372-512)||(31425510-31425650)
chr7 (392-511)||(3904478-3904597)
chr7 (372-513)||(23577187-23577328)
chr7 (392-512)||(23539252-23539372)
chr7 (380-511)||(1842902-1843033)
chr7 (392-511)||(2650828-2650947)
chr7 (372-511)||(9698538-9698677)
chr7 (372-511)||(48933136-48933275)
chr7 (372-514)||(23232039-23232181)
chr7 (392-513)||(3872185-3872306)
chr7 (372-512)||(7733311-7733451)
chr7 (372-511)||(24605838-24605977)
chr7 (372-511)||(47523650-47523789)
chr7 (380-513)||(6849209-6849342)
chr7 (372-511)||(15014405-15014544)
chr7 (382-513)||(21623031-21623161)
chr7 (372-511)||(42926419-42926559)
chr7 (392-511)||(33427710-33427828)
chr7 (372-511)||(36993820-36993959)
chr7 (372-511)||(39979624-39979763)
chr7 (392-513)||(1907375-1907496)
chr7 (372-481)||(10050866-10050975)
chr7 (392-511)||(1824200-1824319)
chr7 (372-511)||(40847435-40847574)
chr7 (372-494)||(36636506-36636628)
chr7 (411-512)||(21871607-21871708)
chr7 (392-511)||(38057652-38057771)
chr7 (392-513)||(15969804-15969926)
chr7 (372-481)||(45664768-45664877)
chr7 (392-512)||(2093361-2093481)
chr7 (394-513)||(816189-816308)
chr7 (392-511)||(14786635-14786754)
chr7 (372-511)||(20923958-20924097)
chr7 (375-509)||(32267350-32267483)
chr7 (392-511)||(4514785-4514904)
chr7 (392-511)||(26577285-26577404)
chr7 (392-495)||(31042271-31042374)
chr7 (372-513)||(2457670-2457809)
chr7 (372-510)||(24140450-24140588)
chr7 (392-512)||(25777111-25777231)
chr7 (372-503)||(22501594-22501725)
chr7 (397-496)||(27304895-27304994)
chr7 (396-495)||(26415448-26415547)
chr7 (392-502)||(11852028-11852138)
chr7 (372-510)||(27132722-27132860)
chr7 (395-513)||(10222628-10222745)
chr7 (396-513)||(1821994-1822108)
chr7 (453-511)||(687947-688005)
chr7 (445-511)||(38090336-38090402)
chr7 (396-469)||(15330247-15330320)
chr7 (392-511)||(27130354-27130471)
chr7 (399-468)||(5235384-5235452)
chr7 (372-481)||(11890177-11890286)
chr7 (444-504)||(5106740-5106799)
[»] chr2 (56 HSPs)
chr2 (372-511)||(32185828-32185967)
chr2 (372-512)||(15636734-15636874)
chr2 (372-511)||(20065074-20065213)
chr2 (372-504)||(1141532-1141664)
chr2 (372-512)||(21293710-21293850)
chr2 (372-504)||(32300447-32300579)
chr2 (372-510)||(23388379-23388517)
chr2 (380-510)||(28319580-28319710)
chr2 (372-512)||(22140363-22140503)
chr2 (372-511)||(8430292-8430431)
chr2 (372-508)||(28262360-28262496)
chr2 (392-511)||(43408511-43408630)
chr2 (372-511)||(32008948-32009088)
chr2 (372-512)||(41736168-41736308)
chr2 (372-511)||(13788055-13788194)
chr2 (372-511)||(28841342-28841481)
chr2 (394-512)||(44476374-44476492)
chr2 (382-511)||(12779606-12779735)
chr2 (382-511)||(37552233-37552362)
chr2 (372-512)||(41637614-41637754)
chr2 (392-511)||(7093584-7093703)
chr2 (392-511)||(14757121-14757240)
chr2 (372-512)||(18551252-18551392)
chr2 (372-512)||(37723991-37724131)
chr2 (372-511)||(29749403-29749542)
chr2 (382-511)||(23857958-23858086)
chr2 (416-512)||(27039907-27040003)
chr2 (372-512)||(30783334-30783474)
chr2 (392-511)||(13613093-13613212)
chr2 (402-511)||(44722958-44723067)
chr2 (396-511)||(26243321-26243436)
chr2 (372-511)||(31266350-31266489)
chr2 (392-506)||(38362276-38362390)
chr2 (380-511)||(27327620-27327751)
chr2 (392-511)||(2556111-2556230)
chr2 (372-513)||(26687688-26687830)
chr2 (392-511)||(36550852-36550970)
chr2 (396-494)||(35697475-35697573)
chr2 (392-497)||(18916415-18916519)
chr2 (372-513)||(37802377-37802517)
chr2 (372-513)||(40018798-40018939)
chr2 (372-496)||(44366012-44366136)
chr2 (372-512)||(9004307-9004447)
chr2 (394-485)||(13134646-13134737)
chr2 (372-497)||(8763630-8763755)
chr2 (372-441)||(27523007-27523076)
chr2 (444-512)||(22192247-22192315)
chr2 (372-511)||(36373896-36374033)
chr2 (443-505)||(12860235-12860297)
chr2 (448-515)||(16098913-16098980)
chr2 (396-494)||(9590490-9590588)
chr2 (380-486)||(18609518-18609624)
chr2 (372-420)||(27058407-27058455)
chr2 (394-434)||(29998636-29998676)
chr2 (372-419)||(22192188-22192235)
chr2 (392-481)||(31966555-31966643)
[»] chr4 (60 HSPs)
chr4 (372-511)||(27040025-27040164)
chr4 (372-511)||(46286229-46286368)
chr4 (372-504)||(18051837-18051969)
chr4 (380-511)||(19680424-19680555)
chr4 (372-511)||(32175737-32175876)
chr4 (372-506)||(37378628-37378762)
chr4 (382-511)||(4586758-4586887)
chr4 (372-511)||(55309212-55309352)
chr4 (382-513)||(19839187-19839318)
chr4 (392-512)||(7111945-7112065)
chr4 (372-496)||(30568014-30568138)
chr4 (372-511)||(13564915-13565054)
chr4 (372-511)||(45532579-45532718)
chr4 (386-512)||(9238624-9238750)
chr4 (382-511)||(13028816-13028945)
chr4 (372-481)||(18744100-18744209)
chr4 (392-512)||(9670478-9670598)
chr4 (392-512)||(29625343-29625463)
chr4 (372-511)||(5473847-5473986)
chr4 (372-511)||(22168266-22168405)
chr4 (392-511)||(38619865-38619984)
chr4 (372-511)||(2275677-2275817)
chr4 (382-510)||(4627079-4627207)
chr4 (392-512)||(38645768-38645888)
chr4 (372-511)||(22128312-22128451)
chr4 (372-511)||(30268988-30269127)
chr4 (372-511)||(30283062-30283201)
chr4 (392-510)||(24682328-24682446)
chr4 (394-511)||(44783502-44783620)
chr4 (382-511)||(18714910-18715039)
chr4 (372-513)||(33914057-33914198)
chr4 (380-512)||(36689683-36689815)
chr4 (382-513)||(54539294-54539425)
chr4 (382-511)||(25026565-25026694)
chr4 (372-512)||(5399607-5399747)
chr4 (392-512)||(9239280-9239400)
chr4 (392-511)||(9913276-9913395)
chr4 (392-511)||(30508005-30508124)
chr4 (372-513)||(8878881-8879022)
chr4 (392-481)||(14944764-14944853)
chr4 (372-497)||(25147719-25147844)
chr4 (392-514)||(9058949-9059071)
chr4 (375-507)||(38223511-38223643)
chr4 (404-512)||(42055427-42055535)
chr4 (372-511)||(1638445-1638584)
chr4 (372-511)||(12071960-12072099)
chr4 (392-511)||(4606829-4606948)
chr4 (372-511)||(16915367-16915506)
chr4 (372-481)||(22156631-22156740)
chr4 (382-515)||(45091282-45091402)
chr4 (395-511)||(30420033-30420149)
chr4 (392-512)||(12106001-12106120)
chr4 (392-481)||(6553822-6553911)
chr4 (392-511)||(34557201-34557320)
chr4 (382-441)||(37761912-37761971)
chr4 (396-512)||(3613017-3613134)
chr4 (392-481)||(313605-313694)
chr4 (380-510)||(29238429-29238559)
chr4 (372-496)||(39234940-39235063)
chr4 (397-512)||(23104371-23104487)
[»] chr3 (88 HSPs)
chr3 (372-511)||(9652574-9652713)
chr3 (372-518)||(19223445-19223591)
chr3 (372-504)||(18539800-18539932)
chr3 (372-511)||(18104530-18104669)
chr3 (372-504)||(4393357-4393489)
chr3 (372-512)||(27449084-27449224)
chr3 (382-513)||(48404866-48404997)
chr3 (372-510)||(11915754-11915892)
chr3 (372-513)||(5260933-5261074)
chr3 (372-512)||(11007682-11007822)
chr3 (380-512)||(29956376-29956508)
chr3 (380-512)||(30005531-30005663)
chr3 (372-511)||(11219134-11219273)
chr3 (372-511)||(19269864-19270003)
chr3 (372-511)||(25882566-25882705)
chr3 (372-502)||(29704041-29704171)
chr3 (382-511)||(13921331-13921460)
chr3 (372-512)||(8428167-8428307)
chr3 (392-512)||(26098829-26098949)
chr3 (372-511)||(8110335-8110474)
chr3 (392-511)||(13905038-13905157)
chr3 (372-511)||(18091547-18091686)
chr3 (372-511)||(26390634-26390773)
chr3 (382-513)||(29236050-29236181)
chr3 (392-511)||(43329763-43329882)
chr3 (372-513)||(7623529-7623670)
chr3 (382-511)||(21816727-21816856)
chr3 (396-516)||(8546265-8546385)
chr3 (372-511)||(8543465-8543603)
chr3 (373-511)||(1310959-1311097)
chr3 (372-481)||(17582331-17582440)
chr3 (372-512)||(18380020-18380160)
chr3 (392-511)||(10941665-10941784)
chr3 (372-511)||(17762638-17762777)
chr3 (372-511)||(19063958-19064097)
chr3 (373-512)||(19610335-19610474)
chr3 (392-513)||(23773493-23773614)
chr3 (392-512)||(3461309-3461429)
chr3 (392-511)||(1745488-1745606)
chr3 (386-481)||(6718720-6718815)
chr3 (392-511)||(11837214-11837333)
chr3 (372-511)||(16299857-16299996)
chr3 (392-511)||(5565738-5565857)
chr3 (372-511)||(30219334-30219473)
chr3 (372-481)||(19545506-19545615)
chr3 (372-512)||(26830440-26830581)
chr3 (382-495)||(28859597-28859710)
chr3 (372-513)||(29215988-29216129)
chr3 (372-508)||(1628211-1628347)
chr3 (380-511)||(10803724-10803856)
chr3 (372-511)||(11085342-11085481)
chr3 (392-511)||(15063992-15064111)
chr3 (392-511)||(23217208-23217327)
chr3 (392-511)||(46942503-46942622)
chr3 (375-512)||(31250087-31250224)
chr3 (372-508)||(28389969-28390105)
chr3 (372-512)||(36543745-36543885)
chr3 (392-511)||(21490034-21490153)
chr3 (392-511)||(31433753-31433872)
chr3 (402-513)||(37283549-37283660)
chr3 (392-513)||(21020081-21020202)
chr3 (392-512)||(6088227-6088347)
chr3 (372-495)||(49915447-49915570)
chr3 (372-510)||(27968911-27969049)
chr3 (402-511)||(17269604-17269713)
chr3 (372-512)||(36564438-36564578)
chr3 (392-511)||(5744432-5744551)
chr3 (392-511)||(5781391-5781510)
chr3 (392-511)||(46012728-46012847)
chr3 (382-512)||(47263264-47263394)
chr3 (381-512)||(29451099-29451231)
chr3 (392-511)||(50665636-50665755)
chr3 (382-511)||(10772053-10772183)
chr3 (382-511)||(21088758-21088885)
chr3 (372-512)||(15490031-15490170)
chr3 (393-512)||(15501550-15501670)
chr3 (372-511)||(20615345-20615482)
chr3 (416-511)||(20761950-20762045)
chr3 (380-506)||(26963254-26963380)
chr3 (372-481)||(27212811-27212920)
chr3 (381-511)||(27182658-27182786)
chr3 (452-511)||(6447246-6447305)
chr3 (394-511)||(13615433-13615550)
chr3 (394-480)||(27711199-27711285)
chr3 (382-428)||(35579608-35579654)
chr3 (468-509)||(11386427-11386468)
chr3 (392-441)||(23233233-23233282)
chr3 (392-481)||(50240762-50240851)
[»] chr5 (61 HSPs)
chr5 (372-502)||(23975635-23975765)
chr5 (372-511)||(12045727-12045866)
chr5 (372-511)||(15060973-15061112)
chr5 (372-511)||(36196394-36196533)
chr5 (372-512)||(8108859-8108999)
chr5 (372-511)||(13974078-13974217)
chr5 (392-512)||(4125187-4125307)
chr5 (372-511)||(618294-618433)
chr5 (392-511)||(746868-746987)
chr5 (372-511)||(7888797-7888936)
chr5 (372-511)||(17039631-17039770)
chr5 (380-511)||(28265475-28265606)
chr5 (392-512)||(38837670-38837790)
chr5 (372-511)||(16121839-16121978)
chr5 (382-513)||(26708583-26708714)
chr5 (382-513)||(26978317-26978448)
chr5 (372-511)||(36716200-36716339)
chr5 (372-511)||(7003730-7003867)
chr5 (372-511)||(23408980-23409120)
chr5 (372-511)||(8886851-8886990)
chr5 (392-511)||(10494757-10494876)
chr5 (372-511)||(12328226-12328365)
chr5 (394-511)||(16631874-16631991)
chr5 (392-511)||(2472714-2472833)
chr5 (372-511)||(33818561-33818700)
chr5 (392-511)||(35620344-35620462)
chr5 (375-513)||(25652581-25652719)
chr5 (382-511)||(24138841-24138970)
chr5 (372-512)||(36831889-36832029)
chr5 (372-511)||(20959508-20959647)
chr5 (392-511)||(40484064-40484183)
chr5 (382-511)||(5982655-5982785)
chr5 (372-511)||(13620127-13620266)
chr5 (392-510)||(17771969-17772087)
chr5 (392-511)||(17036412-17036531)
chr5 (372-511)||(17986729-17986868)
chr5 (372-511)||(23423756-23423895)
chr5 (392-511)||(25397788-25397907)
chr5 (394-511)||(11927786-11927903)
chr5 (392-496)||(10420267-10420371)
chr5 (392-512)||(27428011-27428131)
chr5 (382-512)||(20187940-20188070)
chr5 (372-481)||(17079405-17079514)
chr5 (392-512)||(36597339-36597459)
chr5 (372-483)||(33816786-33816897)
chr5 (372-495)||(25673245-25673367)
chr5 (396-510)||(33734974-33735088)
chr5 (372-497)||(32726740-32726865)
chr5 (405-511)||(23974576-23974682)
chr5 (396-481)||(5043541-5043626)
chr5 (396-468)||(31853131-31853203)
chr5 (392-508)||(35778161-35778277)
chr5 (372-497)||(3080710-3080835)
chr5 (466-511)||(16464723-16464768)
chr5 (372-481)||(18413556-18413665)
chr5 (467-511)||(29727895-29727939)
chr5 (372-428)||(29727929-29727985)
chr5 (372-510)||(16472182-16472320)
chr5 (472-511)||(19890986-19891025)
chr5 (392-435)||(22649405-22649448)
chr5 (392-436)||(26301923-26301967)
[»] chr1 (73 HSPs)
chr1 (372-513)||(12161814-12161955)
chr1 (372-512)||(20408159-20408299)
chr1 (372-512)||(22158802-22158942)
chr1 (372-511)||(23457897-23458036)
chr1 (372-511)||(52183678-52183817)
chr1 (372-512)||(9109974-9110114)
chr1 (372-511)||(7181555-7181694)
chr1 (372-515)||(18890545-18890688)
chr1 (381-512)||(50092297-50092428)
chr1 (372-513)||(12720809-12720950)
chr1 (372-504)||(9464103-9464235)
chr1 (372-512)||(17661050-17661190)
chr1 (372-511)||(6412053-6412192)
chr1 (372-511)||(6459217-6459356)
chr1 (372-511)||(45839292-45839431)
chr1 (382-511)||(41120737-41120866)
chr1 (392-511)||(28229455-28229574)
chr1 (372-510)||(9259184-9259322)
chr1 (382-511)||(4340417-4340546)
chr1 (372-512)||(9985326-9985466)
chr1 (372-511)||(15243085-15243224)
chr1 (372-511)||(20290321-20290459)
chr1 (372-513)||(29549418-29549559)
chr1 (392-512)||(8940993-8941113)
chr1 (392-511)||(19865264-19865383)
chr1 (372-511)||(22603548-22603687)
chr1 (392-511)||(46339445-46339564)
chr1 (392-511)||(46790020-46790139)
chr1 (380-511)||(51973432-51973563)
chr1 (382-511)||(9177110-9177239)
chr1 (382-511)||(50845330-50845459)
chr1 (403-510)||(25787998-25788105)
chr1 (372-511)||(41752433-41752572)
chr1 (382-505)||(46785964-46786087)
chr1 (372-494)||(41071852-41071974)
chr1 (372-511)||(14760867-14761006)
chr1 (392-511)||(19081748-19081867)
chr1 (392-511)||(19129636-19129755)
chr1 (372-511)||(38531170-38531309)
chr1 (372-507)||(16913581-16913716)
chr1 (372-513)||(12989852-12989993)
chr1 (372-481)||(32046876-32046985)
chr1 (392-512)||(48522538-48522658)
chr1 (372-511)||(17200010-17200149)
chr1 (372-511)||(18894900-18895039)
chr1 (392-511)||(46865263-46865382)
chr1 (372-513)||(13102316-13102457)
chr1 (372-512)||(7830031-7830171)
chr1 (372-495)||(22789607-22789730)
chr1 (396-513)||(13308818-13308935)
chr1 (411-511)||(27253855-27253955)
chr1 (372-511)||(12369951-12370080)
chr1 (396-513)||(12806834-12806952)
chr1 (404-478)||(41359020-41359094)
chr1 (392-511)||(20580929-20581049)
chr1 (374-481)||(12174796-12174903)
chr1 (392-506)||(26825260-26825374)
chr1 (375-511)||(13195586-13195722)
chr1 (392-479)||(13522993-13523080)
chr1 (372-510)||(17733954-17734093)
chr1 (372-511)||(41063197-41063336)
chr1 (395-497)||(30928392-30928494)
chr1 (392-495)||(11917806-11917908)
chr1 (392-511)||(18787913-18788029)
chr1 (404-481)||(9882070-9882144)
chr1 (372-511)||(29093554-29093693)
chr1 (394-512)||(39748955-39749073)
chr1 (404-513)||(45918902-45919011)
chr1 (404-512)||(6775919-6776025)
chr1 (382-486)||(30673504-30673608)
chr1 (392-427)||(14486716-14486751)
chr1 (396-507)||(16258490-16258601)
chr1 (392-497)||(49881064-49881168)
[»] chr6 (79 HSPs)
chr6 (372-512)||(9892963-9893103)
chr6 (372-512)||(20182145-20182285)
chr6 (372-508)||(21140939-21141075)
chr6 (372-512)||(22153706-22153846)
chr6 (372-511)||(22579349-22579488)
chr6 (372-513)||(6598464-6598605)
chr6 (372-512)||(16250801-16250941)
chr6 (372-511)||(28364911-28365050)
chr6 (372-513)||(495625-495766)
chr6 (372-508)||(25398002-25398138)
chr6 (392-512)||(26224448-26224568)
chr6 (372-511)||(15364458-15364597)
chr6 (392-512)||(6605495-6605615)
chr6 (400-511)||(15509184-15509295)
chr6 (372-511)||(18492369-18492508)
chr6 (372-511)||(24661009-24661148)
chr6 (372-511)||(30833960-30834099)
chr6 (372-511)||(12200694-12200833)
chr6 (372-511)||(21990175-21990313)
chr6 (392-510)||(5360429-5360547)
chr6 (382-511)||(15448395-15448524)
chr6 (372-481)||(27705422-27705531)
chr6 (395-511)||(1939242-1939358)
chr6 (372-512)||(2992615-2992755)
chr6 (372-511)||(2669309-2669448)
chr6 (392-511)||(11049751-11049870)
chr6 (380-495)||(23281794-23281908)
chr6 (392-511)||(33250708-33250827)
chr6 (392-505)||(5192195-5192308)
chr6 (392-511)||(15961407-15961526)
chr6 (372-511)||(22083838-22083977)
chr6 (392-511)||(26939607-26939726)
chr6 (392-512)||(12499236-12499357)
chr6 (392-512)||(12506565-12506686)
chr6 (392-512)||(12509544-12509665)
chr6 (395-511)||(6978300-6978416)
chr6 (372-511)||(12951708-12951847)
chr6 (372-510)||(27796835-27796973)
chr6 (372-512)||(18033525-18033664)
chr6 (392-511)||(12160847-12160965)
chr6 (372-514)||(14886561-14886703)
chr6 (372-513)||(12351584-12351725)
chr6 (392-508)||(11077669-11077785)
chr6 (392-493)||(12845023-12845124)
chr6 (372-512)||(9885243-9885383)
chr6 (404-512)||(17919568-17919676)
chr6 (372-511)||(11530225-11530364)
chr6 (404-511)||(28668132-28668239)
chr6 (372-511)||(14036620-14036751)
chr6 (372-481)||(343593-343702)
chr6 (402-511)||(14772691-14772800)
chr6 (392-508)||(14872139-14872255)
chr6 (372-512)||(18048788-18048928)
chr6 (430-511)||(5250197-5250278)
chr6 (372-504)||(9060091-9060222)
chr6 (410-510)||(10458802-10458902)
chr6 (392-470)||(13145022-13145100)
chr6 (396-513)||(21691493-21691611)
chr6 (392-505)||(20692817-20692930)
chr6 (392-483)||(12680212-12680303)
chr6 (402-507)||(12157380-12157485)
chr6 (392-505)||(12205191-12205304)
chr6 (392-465)||(19175823-19175896)
chr6 (372-496)||(22055627-22055751)
chr6 (394-507)||(1954903-1955015)
chr6 (411-467)||(3673177-3673233)
chr6 (392-481)||(5270412-5270502)
chr6 (392-481)||(33547566-33547655)
chr6 (451-513)||(13251377-13251439)
chr6 (392-496)||(10929511-10929616)
chr6 (392-511)||(6065457-6065576)
chr6 (392-511)||(16118166-16118285)
chr6 (457-511)||(8844168-8844222)
chr6 (375-451)||(13668054-13668130)
chr6 (472-511)||(33191180-33191219)
chr6 (396-481)||(2396227-2396313)
chr6 (396-497)||(7000896-7000998)
chr6 (392-480)||(30745750-30745836)
chr6 (444-496)||(28221664-28221716)
[»] scaffold0001 (3 HSPs)
scaffold0001 (372-511)||(84303-84442)
scaffold0001 (372-511)||(8110-8249)
scaffold0001 (372-511)||(21842-21981)
[»] scaffold0023 (1 HSPs)
scaffold0023 (372-511)||(39703-39842)
[»] scaffold0599 (1 HSPs)
scaffold0599 (372-510)||(7505-7643)
[»] scaffold0087 (1 HSPs)
scaffold0087 (372-512)||(37786-37926)
[»] scaffold0603 (1 HSPs)
scaffold0603 (372-511)||(5979-6118)
[»] scaffold0576 (1 HSPs)
scaffold0576 (372-511)||(9229-9368)
[»] scaffold0219 (1 HSPs)
scaffold0219 (372-511)||(19603-19742)
[»] scaffold0108 (1 HSPs)
scaffold0108 (372-511)||(12653-12791)
[»] scaffold0007 (4 HSPs)
scaffold0007 (380-511)||(3750-3881)
scaffold0007 (372-512)||(202774-202914)
scaffold0007 (440-511)||(274665-274736)
scaffold0007 (372-434)||(276211-276273)
[»] scaffold0240 (1 HSPs)
scaffold0240 (382-511)||(14990-15119)
[»] scaffold0014 (1 HSPs)
scaffold0014 (382-513)||(22221-22352)
[»] scaffold0076 (1 HSPs)
scaffold0076 (372-511)||(26483-26622)
[»] scaffold0128 (1 HSPs)
scaffold0128 (382-511)||(10663-10792)
[»] scaffold0047 (1 HSPs)
scaffold0047 (372-513)||(58582-58723)
[»] scaffold0035 (1 HSPs)
scaffold0035 (372-508)||(74720-74857)
[»] scaffold0717 (1 HSPs)
scaffold0717 (372-511)||(918-1058)
[»] scaffold0058 (1 HSPs)
scaffold0058 (372-511)||(74541-74680)
[»] scaffold0009 (3 HSPs)
scaffold0009 (392-511)||(219656-219775)
scaffold0009 (404-510)||(182562-182668)
scaffold0009 (392-511)||(215663-215775)
[»] scaffold0006 (2 HSPs)
scaffold0006 (392-507)||(84678-84793)
scaffold0006 (392-511)||(120987-121106)
[»] scaffold0655 (1 HSPs)
scaffold0655 (392-511)||(3162-3281)
[»] scaffold0002 (1 HSPs)
scaffold0002 (392-511)||(439983-440102)
[»] scaffold0161 (1 HSPs)
scaffold0161 (380-508)||(6803-6931)
[»] scaffold0062 (1 HSPs)
scaffold0062 (372-511)||(43917-44056)
[»] scaffold0184 (1 HSPs)
scaffold0184 (380-508)||(7464-7592)
[»] scaffold0069 (1 HSPs)
scaffold0069 (372-511)||(10158-10297)
[»] scaffold0011 (1 HSPs)
scaffold0011 (423-511)||(17617-17705)
[»] scaffold0019 (1 HSPs)
scaffold0019 (372-512)||(173444-173585)
[»] scaffold0554 (1 HSPs)
scaffold0554 (445-511)||(9883-9949)
[»] scaffold0502 (1 HSPs)
scaffold0502 (372-497)||(10892-11017)
[»] scaffold0284 (1 HSPs)
scaffold0284 (392-481)||(1549-1638)
[»] scaffold0211 (1 HSPs)
scaffold0211 (392-481)||(19168-19257)
[»] scaffold0114 (1 HSPs)
scaffold0114 (392-481)||(36322-36411)
[»] scaffold0038 (1 HSPs)
scaffold0038 (444-496)||(22162-22214)


Alignment Details
Target: chr8 (Bit Score: 349; Significance: 0; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 1 - 551
Target Start/End: Complemental strand, 16062446 - 16061899
Alignment:
Q  1 ttcggtaatgatcacaaagaaatgaaggcttctcaatggagatgctctcctaaccatggttaatgatcataatgctaattcttgtttagttaatgaaatg 100  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||    
T  16062446 ttcggtaatgatcacaaagaaattaaggtttctcaatggagatgctctcctaaccatggttaatgatcataatactaattcttggtttgttaatgaaatg 16062347  T
Q  101 tgcgtaacatgacactatgagtttcaatta-ttgtaattaatgcaaatatatttaattaaatccaaatttatttatttttgggtcatatatagcctagtg 199  Q
    ||| ||   ||||||||||||||||||||| ||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  16062346 tgcata---tgacactatgagtttcaattaattgtaaccaatgcaaatatatttaattaaatcgaaatttatttatttttgggtcatata--gcctagtg 16062252  T
Q  200 acaagaagaaattcaccccttatggtgaataagtgaagaataaaatccaattttaaatcttgacaattcaaattatatgaacattaaacacatattgcaa 299  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  16062251 acaagaagaaattcaccccttaagatgaataagtggagaataaaatccaattctaaatcttgacaattcagattatatgaacattaaacacatattacga 16062152  T
Q  300 aatcaaggaacacatctaagacttaagc-agggacataaggcataccaataaccactactnnnnnnnnnnnnnttagtgaaggaaattttgtcagggaaa 398  Q
    |||||||||||  || |||||||||||| | || ||||||||||||||||||||||||||             ||||||| ||||||||| | ||| |||    
T  16062151 aatcaaggaacgtatttaagacttaagcaaagggcataaggcataccaataaccactactaaaaaaataaaaattagtgagggaaattttttgaggaaaa 16062052  T
Q  399 acgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgcc 498  Q
    |||||||||| ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  16062051 acgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttact 16061952  T
Q  499 ttttctagtagtgaactatgcttcttgtggccaaatcttatatcacccaagat 551  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16061951 ttttctagtagtgaactatgcttcttgtggccaaatcttatatcacccaagat 16061899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 16073841 - 16073655
Alignment:
Q  1 ttcggtaatgatcacaaagaaatgaaggcttctcaatggagatgctctcctaaccatggttaatgatcataatgctaattcttgtttagttaatgaaatg 100  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16073841 ttcggtaatgatcacaaagaaattaaggcttctcagtgtagatgctctcctaaccatggttaatgatcataatactaattcttgttttgttaatgaaatg 16073742  T
Q  101 tgcgtaacatgacactatgagtttcaattattgtaattaatgcaaatatatttaattaaatccaaatttatttatttttgggtcatata 189  Q
    ||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16073741 tgcataacatgacactatgagtttcaa--attgtaattaatgcaaatatatttaattaaatccaaatttatttatttttgggtcatata 16073655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 80 - 351
Target Start/End: Complemental strand, 16068594 - 16068325
Alignment:
Q  80 tcttgtttagttaatgaaatgtgcgtaacatgacactatgagtttcaatta-ttgtaattaatgcaaatatatttaattaaatccaaatttatttatttt 178  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||     
T  16068594 tcttgttttgttaatgaaatgtgcatgacatgacactatgagtttcaattaattgttattaatgcaaatatatttaattaaatc-aaatttatttatttc 16068496  T
Q  179 tgggtcatatatagcctagtgacaagaagaaattcaccccttatggtgaataagtgaagaataaaatccaattttaaatcttgacaattcaaattatatg 278  Q
    | |||||| ||  |||||||||  |||||||| |||||| | |  |||||||||||  |||||||||| |||| ||||||||| |||||||| | ||||     
T  16068495 taggtcatgta--gcctagtgattagaagaaaatcacccttaaaagtgaataagtggggaataaaatcgaattctaaatcttgtcaattcaattaatata 16068398  T
Q  279 aacattaaacacatattgcaaaatcaaggaacacatctaagacttaagcagggacataaggcataccaataac 351  Q
    ||||||| |||||||||||||||||||||||| | | |||||||||| || || | |||||||||||||||||    
T  16068397 aacattacacacatattgcaaaatcaaggaacgcgtataagacttaaacaagggcttaaggcataccaataac 16068325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 4330976 - 4331115
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  4330976 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 4331075  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  4331076 tcactaatttccctcgctaattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 372 - 513
Target Start/End: Complemental strand, 24193335 - 24193194
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  |||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  24193335 ttagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 24193236  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  24193235 tcactaatttccctcgctaattttgctttttctagtagtgaa 24193194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 4647894 - 4647755
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  |||||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  4647894 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccg 4647795  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  4647794 tcactaatttccctcgctaattttgttttttctagtagtg 4647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 19240865 - 19241004
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  19240865 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19240964  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  19240965 tcactaatttccctcgctaattttgctttttctagtagtg 19241004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 19314049 - 19314188
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  19314049 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19314148  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  19314149 tcactaatttccctcgctaattttgctttttctagtagtg 19314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 17810296 - 17810436
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| |||||||||||||||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  17810296 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 17810395  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  17810396 tcactaattttcctcgctaattttgctttttctagtagtga 17810436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 32247927 - 32248047
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  32247927 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccctcgttaa 32248026  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  32248027 ttttgctttttctagtagtga 32248047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 514
Target Start/End: Original strand, 29350921 - 29351064
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttc-c 470  Q
    ||||||| ||| |||| || ||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||      
T  29350921 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcta 29351020  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagtgaac 514  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  29351021 gtcactaatttccctcgctaattttgctttttctagtagtgaac 29351064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 372 - 509
Target Start/End: Complemental strand, 9915179 - 9915043
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||| ||||| |||| ||| |||||||||||||||||||||||||||    
T  9915179 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcgac-atggaatttgtgaggaatttcattttttccg 9915081  T
Q  472 tcactaatttccctcgctaattttgccttttctagtag 509  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  9915080 tcactaatttctctcgctaattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 19256220 - 19256349
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 19256319  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||| ||||||||| |||||||||||||    
T  19256320 ccctcgttaattttgctttttctagtagtg 19256349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 386 - 511
Target Start/End: Complemental strand, 25655983 - 25655858
Alignment:
Q  386 tttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 485  Q
    ||||| |||||||||||||||||||||||||||||  |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25655983 tttgtgagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccct 25655884  T
Q  486 cgctaattttgccttttctagtagtg 511  Q
    | |||||||||| |||||||||||||    
T  25655883 cactaattttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 8555443 - 8555303
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| | ||||| ||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  8555443 ttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 8555344  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  8555343 tcactaatttccctcgctaattttgctttttctagtagtga 8555303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 3823131 - 3823270
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| ||||||   |||||||||| ||||||||||||||||    
T  3823131 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattttttccg 3823230  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  3823231 tcactaatttccctcgctaattttgctttttctaatagtg 3823270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 24576143 - 24576024
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  24576143 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 24576044  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  24576043 ttttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 11938753 - 11938881
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||| ||||||||||||||||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-tttttccgtcactaattt 11938851  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| |||||||||||||    
T  11938852 ccctcgctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 27910883 - 27910763
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||||||||||| |||||  ||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  27910883 agggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 27910784  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  27910783 ttttgctttttctagtagtga 27910763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 27957302 - 27957182
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||||||||||| |||||  ||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  27957302 agggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 27957203  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  27957202 ttttgctttttctagtagtga 27957182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 19488180 - 19488061
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||  |||||| |||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  19488180 agggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 19488081  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  19488080 ttttgctttttctagtagtg 19488061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 21350476 - 21350615
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||| ||||||| |||||| |||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  21350476 ttagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 21350575  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||| ||| ||||||| |||||||||||||    
T  21350576 tcactaatttcccttgcttattttgctttttctagtagtg 21350615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 33652565 - 33652704
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| |||||||| ||||||| |||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  33652565 ttagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 33652664  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  33652665 tcactaatttccctcgctaattttgctttttctggtagtg 33652704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 43431698 - 43431559
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||||||||||||||| |||||||| ||||| | |||| | |||||||||||||||||||||||||||    
T  43431698 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccg 43431599  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||| |||||||| | |||||||||||||    
T  43431598 tcactaatttccctcactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 24636660 - 24636790
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||||||||||||||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 24636759  T
Q  482 ccctcgctaattttgc-cttttctagtagtg 511  Q
    |||||| |||||||||  |||||||||||||    
T  24636760 ccctcgttaattttgctattttctagtagtg 24636790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 6817052 - 6817193
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |||||||| || ||||| ||||||||||||||||||| |||||  ||||| |||||||||||||||||||||||||||||    
T  6817052 ttagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccg 6817151  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    ||||| |||| ||| ||||||||||| |||||||||||||||    
T  6817152 tcactgattttccttgctaattttgctttttctagtagtgaa 6817193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 17824755 - 17824615
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||| || |||||||    
T  17824755 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 17824656  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||| |||||||||| |||||||||| ||||||||||||||    
T  17824655 tcacaaatttccctctctaattttgctttttctagtagtga 17824615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 31399627 - 31399507
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| | |||||||||||||||| |||    
T  31399627 agggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatttccctcgttaa 31399528  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||  ||||||||||||||    
T  31399527 ttttgttttttctagtagtga 31399507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 18010179 - 18010060
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18010179 agggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccgtcactaatttctctcgctaa 18010080  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||| ||||||    
T  18010079 ttttgctttttctggtagtg 18010060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 27869256 - 27869375
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||| ||||||||||||||||||||    
T  27869256 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttccctcgctaa 27869355  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  27869356 ttttgctttttctagtagtg 27869375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 32961657 - 32961796
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |||||||| || |||| |||||||||||||||||||| | ||| |||||| ||||||||||||||||||||||||||| |    
T  32961657 ttagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattttttctg 32961756  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||||||||||||||||| |||| ||||||||    
T  32961757 tcactgatttccctcgctaattttgctttttttagtagtg 32961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 392 - 513
Target Start/End: Original strand, 22939331 - 22939452
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| |||| | | ||||||||||||||||||||||||||||||||||||||| || ||||    
T  22939331 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcactaatttccttcactaa 22939430  T
Q  492 ttttgccttttctagtagtgaa 513  Q
    |||||| |||||||||||||||    
T  22939431 ttttgctttttctagtagtgaa 22939452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 30467083 - 30466954
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||| |||||||||||| |||||| ||||| |||||| ||||||| |||||||||| | ||||||||||||||||||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaattt 30466984  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| |||||||||||||    
T  30466983 ccctcgctaattttgctttttctagtagtg 30466954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 394 - 511
Target Start/End: Original strand, 30687956 - 30688073
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 493  Q
    |||||| || ||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  30687956 ggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgatttccctcgctaatt 30688055  T
Q  494 ttgccttttctagtagtg 511  Q
    |||| |||||||||||||    
T  30688056 ttgctttttctagtagtg 30688073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 13061050 - 13060931
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||| |||| | | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  13061050 agggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacctcgctaa 13060951  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| |||||||||    
T  13060950 ttttgcttttgctagtagtg 13060931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 5670298 - 5670168
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||| |||||||||||||||||||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaattt 5670199  T
Q  482 ccctcgctaattttgccttttctagtagtga 512  Q
    |||||| | ||||||  |||||||| |||||    
T  5670198 ccctcgttgattttgttttttctagcagtga 5670168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 17104004 - 17103865
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||| || |||||||    
T  17104004 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 17103905  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||| ||| |||||||||  |||||||||||||    
T  17103904 tcacaaatttctctctctaattttgttttttctagtagtg 17103865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 23752405 - 23752286
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| || ||||| ||||||||||||||||||| ||||| |||||| | |||||||||| |||||||||||||||||||||||| |||||||||||    
T  23752405 agggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatatccctcgctaa 23752306  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||||||| |||||    
T  23752305 ttttgctttttctaatagtg 23752286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 40289559 - 40289421
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||| ||||||||||||||| ||||| |||||| | |||||||||| || |||||||||||||    
T  40289559 ttagtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattttttccg 40289461  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||| |||||||||||||   |||||||||||||    
T  40289460 tcactaattttcctcgctaattttaatttttctagtagtg 40289421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 25000560 - 25000431
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| | ||||||||||||||||||||| | ||| | |||| | | |||||||||||||||||||||||||||||||||||||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 25000461  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||||| | |||||||||||||    
T  25000460 ccctcactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 404 - 512
Target Start/End: Original strand, 8824855 - 8824963
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttc 503  Q
    ||||||||||||||||||||||||| ||||| |||| | | ||| |||||||||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  8824855 aaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccctcgctaattttgctttttc 8824954  T
Q  504 tagtagtga 512  Q
    |||||||||    
T  8824955 tagtagtga 8824963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 25273446 - 25273327
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||| ||||||   |||||||||||| ||||||||||| |||||||||||||||||| |||    
T  25273446 agggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcatttttt-cgtcactaatttccctcgttaa 25273348  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  25273347 ttttgctttttctagtagtga 25273327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 394 - 511
Target Start/End: Complemental strand, 21219357 - 21219240
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 493  Q
    |||| ||||||||||||||||||||||| |||||| ||||| ||||||  |||||| |||| ||||||||||||||||||||||||||| |||||| |||    
T  21219357 ggaatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattttttccgtcactaatttctctcgctgatt 21219258  T
Q  494 ttgccttttctagtagtg 511  Q
    || | |||||||||||||    
T  21219257 tttctttttctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 375 - 512
Target Start/End: Original strand, 29345072 - 29345209
Alignment:
Q  375 gtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtca 474  Q
    |||| |||||||| |  ||||||||||||||||||||| ||||||||||||||| ||||| | || | |||||||||||   |||| |||||||||||||    
T  29345072 gtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtca 29345171  T
Q  475 ctaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||| |||||||| | ||||||||||||||    
T  29345172 ctaatttccctccctaatttttctttttctagtagtga 29345209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 380 - 511
Target Start/End: Original strand, 9631409 - 9631541
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattcc-gtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaa 478  Q
    ||||||||||| | ||||||||||||||  |||||||||||| ||||||| ||||| |||  ||  |||||||||||||||| |||||||||||||||||    
T  9631409 ggaaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttccgtcactaa 9631508  T
Q  479 tttccctcgctaattttgccttttctagtagtg 511  Q
    ||| ||| ||||||||||| |||||||||||||    
T  9631509 ttttccttgctaattttgctttttctagtagtg 9631541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 6816522 - 6816383
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||| ||||| ||||| | |||| | |||||||||| ||||| ||||||| |     
T  6816522 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttttttca 6816423  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||| ||| ||| |||||||||    
T  6816422 tcactaatttccctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 372 - 472
Target Start/End: Original strand, 5879202 - 5879302
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||| ||||||| |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  5879202 ttagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttttccg 5879301  T
Q  472 t 472  Q
    |    
T  5879302 t 5879302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 33413089 - 33412977
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||       |||||||||||||||||||||||||||| ||||||||||||||||||    
T  33413089 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgg------aatttgtgaggaatttcattttttccgttactaatttccctcgctaa 33412996  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||||||||||||    
T  33412995 tttt-ctttttctagtagtg 33412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 396 - 511
Target Start/End: Original strand, 10917849 - 10917964
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 495  Q
    ||||| || |||||||||||||||||||||||| ||||| | | || ||||||| |||||||||| || ||||||||||| |||||||||| ||||||||    
T  10917849 aaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccctccctaatttt 10917948  T
Q  496 gccttttctagtagtg 511  Q
    || |||||||||||||    
T  10917949 gctttttctagtagtg 10917964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 16094876 - 16094762
Alignment:
Q  56 atggttaatgatcataatgctaattcttgtttagttaatgaaatgtgcgtaacatgacactatgagtttcaatta-ttgtaattaatgcaaatatattta 154  Q
    ||||||||||||||||||    | |||||||| ||||||||||||||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  16094876 atggttaatgatcataatatagactcttgttttgttaatgaaatgtgaatgacatgacactatgaatttcaattaattgtaattaatgcaaatatattta 16094777  T
Q  155 attaaatccaaattt 169  Q
    ||||| |||||||||    
T  16094776 attaagtccaaattt 16094762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 431 - 513
Target Start/End: Original strand, 25274654 - 25274736
Alignment:
Q  431 ttttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||| |||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgaa 25274736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 392 - 486
Target Start/End: Complemental strand, 26399126 - 26399032
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctc 486  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||   ||||||||||  |||| |||||||||||||||||||||||||    
T  26399126 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatttccctc 26399032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 392 - 504
Target Start/End: Original strand, 14304247 - 14304359
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||||| ||||||||||| || ||| | ||||| |||||| ||| | |||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  14304247 agggaaaacgcgaaatccctctttatttctggcactaaattttatgacgaggaaatttgcgagggatttcattttttccatcactaatttccctcgctaa 14304346  T
Q  492 ttttgccttttct 504  Q
    |||||| ||||||    
T  14304347 ttttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 15251620 - 15251738
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||||||||||||| |||||||||| ||||||| ||||| ||||||  ||||  |||||  |||| ||||||||||||||||||||||||| ||||    
T  15251620 agggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaaaaatc-gtgagagattttattttttccgtcactaatttccctccctaa 15251718  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||||| |||||||    
T  15251719 ttttgctttttcaagtagtg 15251738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 407 - 512
Target Start/End: Original strand, 8789873 - 8789978
Alignment:
Q  407 tccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctag 506  Q
    |||||||||||||||||||||| ||||| |||||| | |||||||||||||||| || ||||| ||||| ||||| |||| |||||||||| ||| ||||    
T  8789873 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctag 8789972  T
Q  507 tagtga 512  Q
    ||||||    
T  8789973 tagtga 8789978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 404 - 478
Target Start/End: Complemental strand, 19493762 - 19493688
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaa 478  Q
    ||||||||||||||||||||||||| ||||| ||||||   ||||||||||||||||||||||||||||||||||    
T  19493762 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 19493688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 372 - 509
Target Start/End: Original strand, 37992097 - 37992234
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| ||||||| ||||||||||||||||||| ||||| |||| |   ||| ||||| | |||| || |||||||    
T  37992097 ttagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccg 37992196  T
Q  472 tcactaatttccctcgctaattttgccttttctagtag 509  Q
    |||||||||| |||| |||||||||| ||| |||||||    
T  37992197 tcactaattttcctccctaattttgcttttcctagtag 37992234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 31344291 - 31344171
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| ||||||| ||||||||||||||||| || ||||| ||| || ||||||| |||| ||||| ||||||||| |||||||||||| || ||||    
T  31344291 agggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttccatcactaatttccttctctaa 31344192  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||| | |||  |||||||||    
T  31344191 ttttacttttcttagtagtga 31344171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 18844683 - 18844544
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || | ||||||| ||||||||||||||||||  || | || ||||| ||||||  ||||||||||||||||| || ||||||     
T  18844683 ttagtgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgttttcca 18844584  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||| || || |||||||||| ||| |||||||||    
T  18844583 tcacaaattaccatccctaattttgcttttcctagtagtg 18844544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 42700723 - 42700657
Alignment:
Q  445 aatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||| | |||||||||||||    
T  42700723 aatttgtgaggaatttcattttttccgtcactgattttcctcgctaattttactttttctagtagtg 42700657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 6084360 - 6084246
Alignment:
Q  395 gaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    ||||| || ||||| ||||||||||||||||||| |||||  ||||| | |||||| |||  |||| ||||||||||||||||||||  ||| |||||||    
T  6084360 gaaaatgtcaaatctctctctaattccgtcactaaatttttagaccaaggaatttgggag--attttattttttccgtcactaatttatctccctaattt 6084263  T
Q  495 tgccttttctagtagtg 511  Q
    ||| ||||||| |||||    
T  6084262 tgctttttctattagtg 6084246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 16094632 - 16094569
Alignment:
Q  238 aataaaatccaattttaaatcttgacaattcaaattatatgaacattaaacacatattgcaaaa 301  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||    
T  16094632 aataaaattcaattctaaatcttgacaattcaaattatataaacattaatcgcatattgcaaaa 16094569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 17003280 - 17003399
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||  ||||||||| | |||| || |||||  || || | ||||| |||||  ||| |||||||||  ||||||||| |||| ||||    
T  17003280 agggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccacactaattttcctccctaa 17003379  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  17003380 ttttgctttttctagtagtg 17003399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 15289679 - 15289749
Alignment:
Q  411 tctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||||||||| |||||| ||||||||||||   ||||||||||  |||| ||||| |||||| |||||||    
T  15289679 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaattt 15289749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 15470048 - 15470118
Alignment:
Q  411 tctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||||||||| |||||| ||||||||||||   ||||||||||  |||| ||||| |||||| |||||||    
T  15470048 tctctaattccatcactaaattttacgaccaaagaatttgtgagagattttattttctccgtcgctaattt 15470118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 481
Target Start/End: Complemental strand, 29473419 - 29473330
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||||||||||||||| ||||| ||||||| |||| |||||  ||| | |||||| | ||||  ||| ||||||||||  ||||||||    
T  29473419 agggaaaacgtgaaatccttctctgattccgttactaaattttgtgacgaggaaattagagaggggttttattttttccgctactaattt 29473330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 481
Target Start/End: Complemental strand, 41527819 - 41527730
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||| ||| ||||||| ||| ||||||  || |||| ||||| ||| || | ||||| ||||| |||| ||||||||||||||||||||    
T  41527819 agggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtcactaattt 41527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 3692286 - 3692214
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcatttttt 468  Q
    ||||||| |||||| ||||||||||| | |||| |||||| ||| |   |||||||||||||||| |||||||    
T  3692286 aaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttgtgaggaattttatttttt 3692214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 511
Target Start/End: Complemental strand, 24479877 - 24479813
Alignment:
Q  447 tttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||  |||| | |||||| |||||||||||||||| |||||| ||| |||| ||||||||    
T  24479877 tttgtgagagattttactttttctgtcactaatttccctctctaattatgctttttttagtagtg 24479813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 24479915 - 24479875
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacatttt 434  Q
    |||||||||||||| |||||||||||| ||||||| |||||    
T  24479915 ggaaaacgtgaaattcctctctaattctgtcactaaatttt 24479875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 1e-58; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 11036507 - 11036646
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  11036507 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 11036606  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  11036607 tcactaatttcccttgctaattttgctttttctagtagtg 11036646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 20429465 - 20429604
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20429465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccg 20429564  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||| | ||||||||| |||||||||||||    
T  20429565 tcactaatttcccttgttaattttgctttttctagtagtg 20429604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 20174020 - 20174159
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  20174020 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 20174119  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| ||| || ||||||    
T  20174120 tcactaatttccctcgctaattttgcttttcctggtagtg 20174159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 372 - 517
Target Start/End: Complemental strand, 37135424 - 37135279
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||    
T  37135424 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccg 37135325  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaactat 517  Q
    ||||||||||||||| |||||||||  ||||||||||||| |||||    
T  37135324 tcactaatttccctcactaattttgttttttctagtagtgtactat 37135279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 22486394 - 22486535
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || | ||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  22486394 ttagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 22486493  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  22486494 tcactaatttccctcgctaattttgctttttctagtagtgaa 22486535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 27806018 - 27806158
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||    
T  27806018 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 27806117  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  27806118 tcactaattttcctcgctaattttgctttttctagtagtga 27806158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 23699964 - 23699825
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  |||||||||| |||||||| ||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  23699964 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 23699865  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  23699864 tcactaatttccctcgctaatttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 28800878 - 28801017
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |    
T  28800878 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctg 28800977  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  28800978 tcactaatttccctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 18217829 - 18217970
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||| ||||||| |||||||||||||||| |||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  18217829 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 18217928  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  18217929 tcactaatttccctcgctaattttgctttttctagtagtgaa 18217970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 372 - 513
Target Start/End: Complemental strand, 23750875 - 23750734
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |||||||| || ||||||||||||||||||||||||| |||||||||||| | |||||||||| ||||||||||||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccg 23750776  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  23750775 tcactaatttccctcgctaattttgttttttctagtagtgaa 23750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 21917473 - 21917333
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  21917473 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 21917374  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  21917373 tcactaatttccctcactaattttgctttttctagtagtga 21917333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 31425650 - 31425510
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  31425650 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattttttccg 31425551  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  31425550 tcactaatttccctcgctaattttgctttttctaatagtga 31425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 3904597 - 3904478
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3904597 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccctcgctaa 3904498  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  3904497 ttttgctttttctagtagtg 3904478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 372 - 513
Target Start/End: Complemental strand, 23577328 - 23577187
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |||||||||||||||||||| |||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  23577328 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 23577229  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    ||||||||||| |||||| ||||| | |||||||||||||||    
T  23577228 tcactaatttctctcgctgatttttctttttctagtagtgaa 23577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 23539252 - 23539372
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||| ||||||||||||||||||||||||||| || ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23539252 agggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 23539351  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  23539352 ttttgctttttctagtagtga 23539372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 380 - 511
Target Start/End: Original strand, 1842902 - 1843033
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| || ||||||||||| ||||||||| ||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  1842902 ggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaat 1843001  T
Q  480 ttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||| ||||||||| |||||||||||||    
T  1843002 ttccctcgttaattttgctttttctagtagtg 1843033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 2650947 - 2650828
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  2650947 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcactaa 2650848  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||||||||||||    
T  2650847 tttttctttttctagtagtg 2650828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 9698677 - 9698538
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||| |||||||||||||||||||| |||||| ||||| | ||||||||| |||||||||| ||||||    
T  9698677 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 9698578  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  9698577 tcactaatttccctcgctaattttgctttttctagtagtg 9698538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 48933136 - 48933275
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||  |||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  48933136 ttagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccg 48933235  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||| ||||||||||||||| ||||||| |||||    
T  48933236 tcactaattttcctcgctaattttgctttttctaatagtg 48933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 372 - 514
Target Start/End: Original strand, 23232039 - 23232181
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| |||||||||| |||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  23232039 ttagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 23232138  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaac 514  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  23232139 tcactaatttccctctctaattttgctttttctagtagtgaac 23232181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 392 - 513
Target Start/End: Complemental strand, 3872306 - 3872185
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||  ||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  3872306 agggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 3872207  T
Q  492 ttttgccttttctagtagtgaa 513  Q
    |||||| |||||||||||||||    
T  3872206 ttttgctttttctagtagtgaa 3872185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 7733451 - 7733311
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||| ||||| ||||||||||||||||||||||| ||| ||||| |||||| | |||||||||||||||||||||||||||    
T  7733451 ttagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 7733352  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  7733351 tcactaatttccctcgctaatttcgctttttctagtagtga 7733311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 24605838 - 24605977
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||||||||||| ||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  24605838 ttagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 24605937  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||| ||||| | |||||||||||||    
T  24605938 tcactaatttccctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 47523789 - 47523650
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  47523789 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 47523690  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||||||||||||   |||||||||||||    
T  47523689 tcactaatttccctcgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 380 - 513
Target Start/End: Complemental strand, 6849342 - 6849209
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| || ||| ||||||| ||||| ||||||||||||||||||| ||||| |||| | | |||||||||||||||||||||| ||||||||||||    
T  6849342 ggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccgtcactaat 6849243  T
Q  480 ttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||||| |||||||||||||||    
T  6849242 ttccctcgctaattttgctttttctagtagtgaa 6849209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 15014544 - 15014405
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||| | | |||||||||||||||| ||||||||||    
T  15014544 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccg 15014445  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| ||||||||||||||||||| | |||||||||||||    
T  15014444 tcaccaatttccctcgctaattttactttttctagtagtg 15014405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 21623031 - 21623161
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||||||||||||||||| |||||| ||||| || ||| | |||||||||||||||||||||||||||||||||||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaattt 21623130  T
Q  482 ccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||| ||||||| |||||||||||||||    
T  21623131 ccctcgct-attttgctttttctagtagtgaa 21623161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 42926559 - 42926419
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcatt-ttttcc 470  Q
    ||||||| ||| |||| || ||| ||||| ||||||||||||||||||||||||||| ||||| |||| | |||||||||||||||||||||| ||||||    
T  42926559 ttagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttcc 42926460  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||| |||||||||||||   |||||||||||||    
T  42926459 gtcactaattttcctcgctaattttattttttctagtagtg 42926419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 33427710 - 33427828
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||  |||||||||||||||||||||    
T  33427710 agggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcatttttt-ggtcactaatttccctcgctaa 33427808  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||  |||||||||||||    
T  33427809 ttttgttttttctagtagtg 33427828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 36993820 - 36993959
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||||||||||| || ||| ||||| ||||||| || |||||||||||||||| |||||||||| | |||||||||||||||||| || ||||||     
T  36993820 ttagtgaaggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttcca 36993919  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||||| ||| |||||||||    
T  36993920 tcacaaatttccctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 39979763 - 39979624
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| |||||||||||||||||||||||| || ||||| |||||| | |||||||||||||||| || |||||||    
T  39979763 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 39979664  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||||| ||| ||| |||||    
T  39979663 tcacaaatttccctccctaattttgcttttcctaatagtg 39979624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 392 - 513
Target Start/End: Original strand, 1907375 - 1907496
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||||||||||||| |||||||| ||||| ||||||   ||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  1907375 agggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccgtcactaatttccctcgctaa 1907474  T
Q  492 ttttgccttttctagtagtgaa 513  Q
    |||||| ||| |||||||||||    
T  1907475 ttttgcttttcctagtagtgaa 1907496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 10050975 - 10050866
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||| ||||||||||||||||    
T  10050975 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccg 10050876  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  10050875 tcactaattt 10050866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 1824319 - 1824200
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||  |||||| |||||||||||||||||||| ||||| |||||| |||||||||||||||||| || ||||||||||| |||||||||| ||||    
T  1824319 agggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccctccctaa 1824220  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| |||||||||    
T  1824219 ttttgcttttcctagtagtg 1824200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 40847574 - 40847435
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| ||||||   ||||||||| |||||| || |||||||    
T  40847574 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccg 40847475  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||| | ||| |||||||||    
T  40847474 tcacaaatttccctccctaattttacttttcctagtagtg 40847435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 372 - 494
Target Start/End: Original strand, 36636506 - 36636628
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| || |||||||    
T  36636506 ttagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 36636605  T
Q  472 tcactaatttccctcgctaattt 494  Q
    |||| |||||||||| |||||||    
T  36636606 tcacaaatttccctccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 411 - 512
Target Start/End: Original strand, 21871607 - 21871708
Alignment:
Q  411 tctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagt 510  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||  ||||||||||||    
T  21871607 tctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgccactgattttcctcgctaattttgttttttctagtagt 21871706  T
Q  511 ga 512  Q
    ||    
T  21871707 ga 21871708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 38057652 - 38057771
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||||||||||||||||| |||||||||||||| | ||| |||||| | |||||||||||||||| ||||||||| |||||||||| ||||| | |    
T  38057652 agggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttccatcactaattttcctcgttga 38057751  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||| ||||||||    
T  38057752 ttttgctttttgtagtagtg 38057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 392 - 513
Target Start/End: Original strand, 15969804 - 15969926
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttccgtcactaatttccctcgcta 490  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||||||   |||||||||| ||||||| ||||||||||||||||| ||||||  ||    
T  15969804 agggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaatttcatttttttccgtcactaatatccctcatta 15969903  T
Q  491 attttgccttttctagtagtgaa 513  Q
    ||||| | |||||||||||||||    
T  15969904 attttactttttctagtagtgaa 15969926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 45664768 - 45664877
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||| | || ||||||||||| ||||||||||||||||||||||||| ||||| ||| || | ||||||||||||||||||||||||| |    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttctg 45664867  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  45664868 tcactaattt 45664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 2093481 - 2093361
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||| ||| ||     ||| ||||||||||||||||||||||||||||||||||||||| |    
T  2093481 agggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatttccctcgctga 2093382  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||| | ||||||||||||||    
T  2093381 tttttctttttctagtagtga 2093361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 394 - 513
Target Start/End: Complemental strand, 816308 - 816189
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 493  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||   ||||||||||  ||||  |||||||||||||||||||||||| |||| |    
T  816308 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttttttccgtcactaatttccctccctaaat 816209  T
Q  494 ttgccttttctagtagtgaa 513  Q
    |||  ||||| |||||||||    
T  816208 ttgttttttccagtagtgaa 816189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 14786754 - 14786635
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||| ||| | |||||||||||||| ||||| ||||||  |||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  14786754 agggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcactaattttcctcactaa 14786655  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||  ||||||| |||||    
T  14786654 ttttgttttttctaatagtg 14786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 20924097 - 20923958
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||| ||||||| |||||  |||||  |||||||| ||  |||| |||||||||     
T  20924097 ttagtgatggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttcca 20923998  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||  ||||||| | |||||||||||||    
T  20923997 tcactaatttccctccataattttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 375 - 509
Target Start/End: Original strand, 32267350 - 32267483
Alignment:
Q  375 gtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtca 474  Q
    |||| |||||||| |  ||||||||||  ||||||||||||||||| ||||||| ||||| ||| || ||||||||||||| |||| | |||||||||||    
T  32267350 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggatttta-tttttccgtca 32267448  T
Q  475 ctaatttccctcgctaattttgccttttctagtag 509  Q
    ||||| |||||| |||||||||| |||||||||||    
T  32267449 ctaatctccctccctaattttgcattttctagtag 32267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 4514785 - 4514904
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||  |||||||||||||||||||| |||||| ||||| ||||||   |||||||||| ||||| || ||||||||||| |||||||||| ||||    
T  4514785 agggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatttccctccctaa 4514884  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| |||||||||    
T  4514885 ttttgcttttcctagtagtg 4514904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 26577285 - 26577404
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||| |||||| | |||||||||||||||| || ||||||||||| | |||||||  ||||    
T  26577285 agggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtttcccttcctaa 26577384  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| | |||||||    
T  26577385 ttttgcttttcccagtagtg 26577404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 31042271 - 31042374
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||| | |||||||||| ||||| ||||||||| | |||||||| |||| ||||    
T  31042271 agggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattttttccataactaattttcctctctaa 31042370  T
Q  492 tttt 495  Q
    ||||    
T  31042371 tttt 31042374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 2457670 - 2457809
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | ||||||||| ||||||||| ||||||||||||| ||||||||||||| ||||| |||| |   ||||||||||  |||| || ||||| |    
T  2457670 ttagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgtgag--attttatattttctg 2457767  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    ||||||||||||||| |||||||||| ||| ||||| |||||    
T  2457768 tcactaatttccctccctaattttgcttttcctagtggtgaa 2457809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 372 - 510
Target Start/End: Original strand, 24140450 - 24140588
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| | |||||| |||| |||||||||| || ||||||||||||   |||||||||||||||| || |||||||    
T  24140450 ttagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatattttccg 24140549  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagt 510  Q
    |||| ||||| |||| |||||||| | ||| ||||||||    
T  24140550 tcacaaattttcctccctaattttacttttcctagtagt 24140588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 25777231 - 25777111
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||| |||||||||| | |||||| ||||||||| ||  |||||||||||| |||| ||||| |  ||||||||||| | || ||||    
T  25777231 agggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattttattggtcactaattttcttccctaa 25777132  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||| ||||||||||||||||    
T  25777131 ttttaccttttctagtagtga 25777111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 372 - 503
Target Start/End: Original strand, 22501594 - 22501725
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  |||||||||||||||||||||||||||||||||| || ||||| || |||   |||||||||   |||| ||||||||||    
T  22501594 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattttttccg 22501693  T
Q  472 tcactaatttccctcgctaattttgccttttc 503  Q
    |||||||||| | ||  |||||||||||||||    
T  22501694 tcactaattttcatccttaattttgccttttc 22501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 397 - 496
Target Start/End: Original strand, 27304895 - 27304994
Alignment:
Q  397 aaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttg 496  Q
    |||||||| ||||||||||||||||||||||| ||||| || ||| | |||||||| || |||| |||||||| |||||||||||||||| |||||||||    
T  27304895 aaacgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcactaatttccctccctaattttg 27304994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 396 - 495
Target Start/End: Original strand, 26415448 - 26415547
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 495  Q
    ||||||| |||||||||| ||||| |||||||| ||||||||| ||  ||||||||||| ||||| ||||||||| |||||||||||| || ||||||||    
T  26415448 aaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattttttccatcactaatttccttctctaatttt 26415547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 392 - 502
Target Start/End: Original strand, 11852028 - 11852138
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||| |||||||||||||||||| |||||  |||||   ||||||||||  |||| |||||||| ||||| |||||| ||| ||||    
T  11852028 agggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctctccctaa 11852127  T
Q  492 ttttgcctttt 502  Q
    |||||| ||||    
T  11852128 ttttgcttttt 11852138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 27132860 - 27132722
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||| ||  ||| |||||| |||||  ||||||||||| ||||||| ||||| | || |  |||||||||| | |||| ||||||||||    
T  27132860 ttagtgagggaaattgtgagaggaaaaacgcgaaatatctctctaattctgtcactaaattttgcaacaaacaaatttgtgatggattttattttttccg 27132761  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagt 510  Q
    | || |||||||||| |||||||| | ||||||||||||    
T  27132760 ttaccaatttccctctctaattttactttttctagtagt 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 513
Target Start/End: Complemental strand, 10222745 - 10222628
Alignment:
Q  395 gaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    |||||||| ||||||||||||||||| |||| || ||||| ||| ||  |||||| |||| ||||| | |||||| ||||||||||| |||| ||||||     
T  10222745 gaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaa-aaatttatgagaaattttactttttctgtcactaattttcctccctaatta 10222647  T
Q  495 tgccttttctagtagtgaa 513  Q
    ||  |||||||||||||||    
T  10222646 tgttttttctagtagtgaa 10222628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 396 - 513
Target Start/End: Complemental strand, 1822108 - 1821994
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 495  Q
    ||||| ||||||| |||||||||||| ||| || |||||| || |  | |||||||||||||||| || ||||||||||||||||   ||| ||||||||    
T  1822108 aaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtcactaatt---ctccctaatttt 1822012  T
Q  496 gccttttctagtagtgaa 513  Q
    || |||  ||||||||||    
T  1822011 gcttttcatagtagtgaa 1821994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 687947 - 688005
Alignment:
Q  453 aggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||| ||||||| ||||| | |||||||||||||||||||| |||||||||||||    
T  687947 aggaattttatttttttcgtcattgatttccctcgctaattttgctttttctagtagtg 688005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 38090336 - 38090402
Alignment:
Q  445 aatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||| |||| |||||||||||||| |||||||||| ||||||||||  || |||||||||    
T  38090336 aatttgtgagggattttattttttccgtcacaaatttccctccctaattttgctattcctagtagtg 38090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 15330320 - 15330247
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttc 469  Q
    ||||| ||||||  ||||||||||| ||||||| ||||| |||||| |||||||||||| ||||||| ||||||    
T  15330320 aaaacttgaaatttctctctaattctgtcactaaattttgcgaccaagaaatttgtgagaaatttcaatttttc 15330247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 27130354 - 27130471
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| |||||||||||||  |||||||||||||  |||| |||  |   ||||||||||| |||| || |||||| ||||| ||||| ||| | ||    
T  27130354 agggaaaatgtgaaatccctct--aattccgtcactaacttttgcgattaacgaatttgtgaggcattttatattttccatcactgatttctctctcgaa 27130451  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  27130452 ttttgctttttctagtagtg 27130471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 468
Target Start/End: Complemental strand, 5235452 - 5235384
Alignment:
Q  399 acgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcatttttt 468  Q
    |||||||||||||||||||||||||||||| || |||||| |  |||||| |||| | ||||||||||||    
T  5235452 acgtgaaatccctctctaattccgtcactaaatattacga-cgggaaattagtgatggatttcatttttt 5235384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 11890286 - 11890177
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||  ||| ||||||| |||| | |||||||| |||||  |||||   ||||| ||||| |||| ||||||||||    
T  11890286 ttagtgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattttttccg 11890187  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  11890186 tcactaattt 11890177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 444 - 504
Target Start/End: Complemental strand, 5106799 - 5106740
Alignment:
Q  444 aaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttct 504  Q
    |||||| ||||| ||||| ||||||| |||||||||||||||  |||||||||| ||||||    
T  5106799 aaatttatgagggatttc-ttttttctgtcactaatttcccttactaattttgctttttct 5106740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 32185828 - 32185967
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  32185828 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccg 32185927  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  32185928 tcactaatttccctcgctaattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 15636874 - 15636734
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  15636874 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 15636775  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  15636774 tcactaatttccctcgctaattttgctttttctggtagtga 15636734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 20065213 - 20065074
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  20065213 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 20065114  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  20065113 tcactaatttccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 504
Target Start/End: Original strand, 1141532 - 1141664
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1141532 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 1141631  T
Q  472 tcactaatttccctcgctaattttgccttttct 504  Q
    |||||||||||||||||||||||||| ||||||    
T  1141632 tcactaatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 21293850 - 21293710
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  21293850 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccg 21293751  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  21293750 tcactaatttccctcgctaattttgttttttctagtagtga 21293710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 504
Target Start/End: Original strand, 32300447 - 32300579
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  32300447 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 32300546  T
Q  472 tcactaatttccctcgctaattttgccttttct 504  Q
    |||||||||||||||||||||||||| ||||||    
T  32300547 tcactaatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 23388517 - 23388379
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  23388517 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcattttttccg 23388418  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagt 510  Q
    |||| ||||||||||||||||||||  ||||||||||||    
T  23388417 tcaccaatttccctcgctaattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 380 - 510
Target Start/End: Complemental strand, 28319710 - 28319580
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  28319710 ggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaat 28319611  T
Q  480 ttccctcgctaattttgccttttctagtagt 510  Q
    ||||||| |||||||||| ||||||||||||    
T  28319610 ttccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 22140503 - 22140363
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |  |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  22140503 ttagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 22140404  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  22140403 tcactaatttccctcgttaattttgctttttctagtagtga 22140363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 8430292 - 8430431
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||    
T  8430292 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccg 8430391  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||| |||||||||||  |||||||||||||    
T  8430392 tcactaatttcccccgctaattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 372 - 508
Target Start/End: Original strand, 28262360 - 28262496
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||     
T  28262360 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttcca 28262459  T
Q  472 tcactaatttccctcgctaattttgccttttctagta 508  Q
    |||||||||||||| ||||||||| | ||||||||||    
T  28262460 tcactaatttcccttgctaattttactttttctagta 28262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 43408630 - 43408511
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43408630 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcactaa 43408531  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  43408530 ttttgctttttctagtagtg 43408511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 32008948 - 32009088
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttcc 470  Q
    ||||||| ||||||||  | ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||| ||||||||    
T  32008948 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcc 32009047  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  32009048 gtcactaattttcctcgctaattttgctttttctagtagtg 32009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 41736168 - 41736308
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || |||||||| || |||||||||||||||| |||||||| ||||| ||| || | |||||||||||||||||||||||||||    
T  41736168 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 41736267  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  41736268 tcactaatttccctcgctaattttgctttttctagtagtga 41736308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 13788194 - 13788055
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || |||||||| || |||||||||||||||| |||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  13788194 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 13788095  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  13788094 tcactgatttccctcgctaattttgctttttctagtagtg 13788055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 28841481 - 28841342
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| ||  |||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  28841481 ttagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 28841382  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    | |||||||||||||||||||||||| ||| |||||||||    
T  28841381 ttactaatttccctcgctaattttgcttttcctagtagtg 28841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 394 - 512
Target Start/End: Complemental strand, 44476492 - 44476374
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 493  Q
    ||||||||| ||||| ||||||||||||||||||| ||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44476492 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccctcgctaatt 44476393  T
Q  494 ttgccttttctagtagtga 512  Q
    |||| ||||||||||||||    
T  44476392 ttgctttttctagtagtga 44476374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 12779606 - 12779735
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||| ||||||||||| |||||||| ||||| ||||||   |||||||||||||||||||||||||||||||||||||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaattt 12779705  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| |||||||||||||    
T  12779706 ccctcgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 37552233 - 37552362
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || |||||||| || |||||||||||||||||||||| || ||||| ||||||   |||||||||||||||||||||||||||||||||||||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37552332  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| |||||||||||||    
T  37552333 ccctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 41637614 - 41637754
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| || |||||||    
T  41637614 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 41637713  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||| |||||||||| |||||||||| ||||||||||||||    
T  41637714 tcacaaatttccctccctaattttgctttttctagtagtga 41637754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 7093584 - 7093703
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||  ||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7093584 agggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 7093683  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| |||||||||    
T  7093684 ttttgcttttactagtagtg 7093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 14757240 - 14757121
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||| |||||| | |||||||    
T  14757240 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcattaattttcttcgctaa 14757141  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  14757140 ttttgctttttctagtagtg 14757121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 18551392 - 18551252
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| | ||||||||||||||||||||||||| ||||| |||  | | |||||||||||||||||||||||||||    
T  18551392 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccg 18551293  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||| ||||||||||||||| |||| |||||||||    
T  18551292 tcactaattttcctcgctaattttgctttttttagtagtga 18551252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 37724131 - 37723991
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  ||||||| || ||||||||||||||||||||| ||||| ||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  37724131 ttagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 37724032  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||| ||||| | |||||||| |||||    
T  37724031 tcactaatttccctcgctgatttttctttttctagcagtga 37723991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 29749542 - 29749403
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| ||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||||| || |||||||    
T  29749542 ttagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccg 29749443  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||  |||||||||| |||||||||||||    
T  29749442 tcacaaatttcccttcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 23858086 - 23857958
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||||  |||||||||||||||||| ||||| |||||| | |||||||||||||||||| |||| |||||||||||||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-ttttcccgtcactaattt 23857988  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| |||||||||||||    
T  23857987 ccctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 27040003 - 27039907
Alignment:
Q  416 aattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtga 27039907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 30783334 - 30783474
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||| || |||||||    
T  30783334 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccg 30783433  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||| |||||||||  |||||||||| ||| ||||||||||    
T  30783434 tcacaaatttcccttcctaattttgcttttcctagtagtga 30783474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 13613212 - 13613093
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||||| |||||||||||| |||||||||    
T  13613212 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcactaattttcctcgctaa 13613113  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | ||||| |||||||    
T  13613112 tttttctttttccagtagtg 13613093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 44722958 - 44723067
Alignment:
Q  402 tgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttt 501  Q
    ||||||||||||||||||||||||||| ||||| |||| | | ||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||    
T  44722958 tgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatcattaatttccctcgctaattttgctttt 44723057  T
Q  502 tctagtagtg 511  Q
    ||||||||||    
T  44723058 tctagtagtg 44723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 396 - 511
Target Start/End: Complemental strand, 26243436 - 26243321
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 495  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||   |||||||||||||||| |||||| ||| ||||||||||||||| |||||||    
T  26243436 aaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccctcgttaatttt 26243337  T
Q  496 gccttttctagtagtg 511  Q
    || |||||||||||||    
T  26243336 gctttttctagtagtg 26243321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 31266350 - 31266489
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| || |||||||    
T  31266350 ttagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 31266449  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    | |  |||||||||| |||||||| | ||| |||||||||    
T  31266450 taaaaaatttccctccctaattttacttttcctagtagtg 31266489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 392 - 506
Target Start/End: Complemental strand, 38362390 - 38362276
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||| | |||||||| ||||||  ||||||||||||   |||||||||||||||||||||||||||||||||||||||||  ||||    
T  38362390 agggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcccttactaa 38362291  T
Q  492 ttttgccttttctag 506  Q
    |||||| ||||||||    
T  38362290 ttttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 380 - 511
Target Start/End: Original strand, 27327620 - 27327751
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| || ||||||||| |||||||||||| |||||||||||||| ||||| || | | | |||||||||||||||| || ||||||||||| |||    
T  27327620 ggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccgtcacaaat 27327719  T
Q  480 ttccctcgctaattttgccttttctagtagtg 511  Q
    |||| || |||||||||| ||| |||||||||    
T  27327720 ttccatccctaattttgcttttcctagtagtg 27327751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 2556111 - 2556230
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| |||||||   |||||||||||||||||| ||||||| |||| |||||||||||| ||||| ||||||||| |||||||||| |||| ||||    
T  2556111 agggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatcactaattttcctctctaa 2556210  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||| ||||||||    
T  2556211 ttttactttttttagtagtg 2556230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 372 - 513
Target Start/End: Complemental strand, 26687830 - 26687688
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttcc 470  Q
    |||||||  ||||||| || | ||||||| |||||||| |||||||||||||||||| ||||| | |||| | |||||||||| ||||| | ||||||||    
T  26687830 ttagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttttttcc 26687731  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||| |||||||||||  ||||||||| || ||||||||||||    
T  26687730 gtcattaatttccctccttaattttgctttatctagtagtgaa 26687688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 36550852 - 36550970
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||||||| ||||||| |||||| ||||| ||||||   || |||||||| |||| ||||||||| ||||||||||||||| ||||    
T  36550852 agggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgagggattt-attttttccatcactaatttccctctctaa 36550950  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||  |||||||||||||    
T  36550951 ttttgttttttctagtagtg 36550970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 396 - 494
Target Start/End: Original strand, 35697475 - 35697573
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||||  |||||||||||  |||| ||||||||||| ||||||||||||| |||||||    
T  35697475 aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgttactaatttccctccctaattt 35697573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 392 - 497
Target Start/End: Complemental strand, 18916519 - 18916415
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||| ||| ||  |||||||||||| |||| | ||||||||||| ||||||||||  ||||    
T  18916519 agggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggatttta-tttttccgtcagtaatttccctgcctaa 18916421  T
Q  492 ttttgc 497  Q
    ||||||    
T  18916420 ttttgc 18916415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 513
Target Start/End: Complemental strand, 37802517 - 37802377
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  ||||||||||| |||||  |||||||||||||||||| ||||| ||||||  ||| ||| |||  |||| ||||||||||    
T  37802517 ttagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgacca-aaaaattgcgagagattttattttttccg 37802419  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||  |||||| ||| |||||||||| ||| |||||||||||    
T  37802418 tcatcaatttctctccctaattttgcttttcctagtagtgaa 37802377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 40018798 - 40018939
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| ||||||| |||||||||||  |||||  ||||| | ||||   ||||||| || ||||| ||||||||||    
T  40018798 ttagtgacgaaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattttttccg 40018897  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    ||||||||||||||   ||||||||  |||||||||||||||    
T  40018898 tcactaatttccctttttaattttgttttttctagtagtgaa 40018939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 372 - 496
Target Start/End: Complemental strand, 44366136 - 44366012
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||| ||| || ||| ||||| |||||||||||||||||||| ||| |  |||||  |||||   |||||||||||||||| |||||||| |    
T  44366136 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctg 44366037  T
Q  472 tcactaatttccctcgctaattttg 496  Q
    ||| ||||||||||| |||||||||    
T  44366036 tcattaatttccctctctaattttg 44366012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 9004447 - 9004307
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |||||||| || ||||  |||||||||||| |||||| |||||   || | | ||||| |||| |||||||||| |||||    
T  9004447 ttagtgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaatttcatttcttccg 9004348  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||| | ||||| |||||||   ||||||||||||||    
T  9004347 tcactaatattcctcgttaattttattttttctagtagtga 9004307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 485
Target Start/End: Complemental strand, 13134737 - 13134646
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 485  Q
    ||||||| |||||||||| |||||||  |||| || |||||||||| |  ||| |||||||| |||| ||||||||||||||||||||||||    
T  13134737 ggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattttttccgtcactaatttccct 13134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 497
Target Start/End: Original strand, 8763630 - 8763755
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||||  |||||| || | ||||||| |||||||| ||||||||||||||| || |||||| || || | |||||||| |  |||| ||||||||||    
T  8763630 ttagtgaaaaaaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccg 8763729  T
Q  472 tcactaatttccctcgctaattttgc 497  Q
    ||||||| ||  ||| ||||||||||    
T  8763730 tcactaacttttctccctaattttgc 8763755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 441
Target Start/End: Original strand, 27523007 - 27523076
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgacca 441  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  27523007 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgacca 27523076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 512
Target Start/End: Original strand, 22192247 - 22192315
Alignment:
Q  444 aaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||  |||| ||||||||||||||||||||| ||| || ||||||| ||||||||||||||    
T  22192247 aaatttgtgagagattttattttttccgtcactaatttctctccctgattttgctttttctagtagtga 22192315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 36373896 - 36374033
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || |||||||| ||||||| |||||  ||||| ||||||| ||||||||| || | |||||| |||| |||| ||||||||||    
T  36373896 ttagtgaggaaaatttagtgagggaaaatgtgaaattcctct--aattcagtcactaaattttacgatcaaggaatttgagagggattttattttttccg 36373993  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    || |||| ||  ||| |||||||||  ||| |||||||||    
T  36373994 tcgctaaatttactccctaattttgtttttcctagtagtg 36374033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 505
Target Start/End: Complemental strand, 12860297 - 12860235
Alignment:
Q  443 gaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttcta 505  Q
    |||||| |||||| |||||| |||||||||||||||||| |||| |||||||||| |||||||    
T  12860297 gaaattagtgagggatttcactttttccgtcactaattttcctccctaattttgctttttcta 12860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 448 - 515
Target Start/End: Complemental strand, 16098980 - 16098913
Alignment:
Q  448 ttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtgaact 515  Q
    |||||||  |||| |||||||| || ||||||||||||| |||||||||  |||||||||||||||||    
T  16098980 ttgtgagagatttaattttttctgttactaatttccctccctaattttgatttttctagtagtgaact 16098913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 494
Target Start/End: Original strand, 9590490 - 9590588
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    ||||||||||||| ||||||||||  || |||| ||||| |||  | | ||||| | |   |||||||||||||||||||||||||||||| |||||||    
T  9590490 aaaacgtgaaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcattttttccgtcactaatttccctccctaattt 9590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 486
Target Start/End: Original strand, 18609518 - 18609624
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| || ||||||||| |||||| ||||||||||| | | || | ||||| ||| || | ||||||||||| |||  ||||| ||||||||||||    
T  18609518 ggaaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccgtcactaat 18609617  T
Q  480 ttccctc 486  Q
    || ||||    
T  18609618 tttcctc 18609624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 27058455 - 27058407
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattc 420  Q
    ||||||| |||||||| || ||||||||||| |||||||||||||||||    
T  27058455 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 29998676 - 29998636
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacatttt 434  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  29998676 ggaaaacgtgaaatccttctctaattccgtcactaaatttt 29998636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 22192188 - 22192235
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaatt 419  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||    
T  22192188 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaatt 22192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 481
Target Start/End: Complemental strand, 31966643 - 31966555
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||| ||| ||||||| ||||||||||  || |||| ||||| |||||| | ||||| | ||| |||| ||||||||||||||||||||    
T  31966643 agggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaatttat-agggattttattttttccgtcactaattt 31966555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 3e-56; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 27040164 - 27040025
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||    
T  27040164 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccg 27040065  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  27040064 tcactaatttccctcgctaattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 46286368 - 46286229
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  46286368 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccg 46286269  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||| || |||||||||| |||||||||||||    
T  46286268 tcactaatttccgtcactaattttgctttttctagtagtg 46286229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 372 - 504
Target Start/End: Original strand, 18051837 - 18051969
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||    
T  18051837 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccg 18051936  T
Q  472 tcactaatttccctcgctaattttgccttttct 504  Q
    ||||||||||||||| |||||||||| ||||||    
T  18051937 tcactaatttccctcactaattttgctttttct 18051969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 380 - 511
Target Start/End: Complemental strand, 19680555 - 19680424
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||     
T  19680555 ggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaa 19680456  T
Q  480 ttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||| |||||||| | |||||||||||||    
T  19680455 ttccctcactaatttttctttttctagtagtg 19680424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 32175876 - 32175737
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| ||||||||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccg 32175777  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  32175776 tcactaatttccctcgttaattttgctttttctagtagtg 32175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 372 - 506
Target Start/End: Complemental strand, 37378762 - 37378628
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  37378762 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 37378663  T
Q  472 tcactaatttccctcgctaattttgccttttctag 506  Q
    ||| |||||| ||||||||||||||| ||||||||    
T  37378662 tcaataattttcctcgctaattttgctttttctag 37378628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 4586887 - 4586758
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||| || | |||||||||||||||||||||||||||||||||||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 4586788  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| |||||||||||||    
T  4586787 ccctcgctaattttgctttttctagtagtg 4586758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 55309352 - 55309212
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcatt-ttttcc 470  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||| ||||||    
T  55309352 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcc 55309253  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  55309252 gtcactaatttccctcgctaattttgctttttctagtagtg 55309212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 19839187 - 19839318
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||| ||||||||||||||||||||||||||    
T  19839187 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattt 19839286  T
Q  482 ccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||| |||||||||||||||    
T  19839287 ccctcgctaattttgctttttctagtagtgaa 19839318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 7112065 - 7111945
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| || |||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7112065 agggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 7111966  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  7111965 ttttgctttttctagtagtga 7111945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 372 - 496
Target Start/End: Complemental strand, 30568138 - 30568014
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||| || |||||||||||||  |||||||||||||||||||||||||||    
T  30568138 ttagtgaaggaaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattttttccg 30568039  T
Q  472 tcactaatttccctcgctaattttg 496  Q
    ||||||||||| |||||||||||||    
T  30568038 tcactaatttcgctcgctaattttg 30568014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 13565054 - 13564915
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||| |||||||||||||||||||| |||||| ||||| | ||||||||| |||||||||| ||||||    
T  13565054 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 13564955  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  13564954 tcactaatttccctcgctaattttgctttttctagtagtg 13564915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 45532718 - 45532579
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||||||||||||||||||||| || ||||| ||| || |||||||||||||||||||||||||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccg 45532619  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| ||||||||| ||||||| |||||    
T  45532618 tcactaatttccctcgttaattttgctttttctaatagtg 45532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 386 - 512
Target Start/End: Complemental strand, 9238750 - 9238624
Alignment:
Q  386 tttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 485  Q
    ||||| ||||||||||| ||||  ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9238750 tttgtgagggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 9238651  T
Q  486 cgctaattttgccttttctagtagtga 512  Q
    |||||||||||| |||| |||||||||    
T  9238650 cgctaattttgctttttttagtagtga 9238624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 13028945 - 13028816
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattt 13028846  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
     ||||||||| ||||| |||||||||||||    
T  13028845 tcctcgctaagtttgctttttctagtagtg 13028816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 18744209 - 18744100
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  18744209 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcattttttccg 18744110  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  18744109 tcactaattt 18744100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 9670598 - 9670478
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||| |||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  9670598 agggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 9670499  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||| | ||||||||||||||    
T  9670498 tttttctttttctagtagtga 9670478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 29625343 - 29625463
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  29625343 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccctcgctaa 29625442  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| |||| || ||||||    
T  29625443 ttttgctttttatattagtga 29625463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 5473847 - 5473986
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||||| |||||||||| |||||||||||||| ||||| |||||| | |||| |||||||||||||||||| |||    
T  5473847 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccg 5473946  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  5473947 tcactaatttccctcgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 22168266 - 22168405
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| |||||| |||||||||||||| ||||| ||||| |||||| | ||||| |||||||||||||||||||||    
T  22168266 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccg 22168365  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  22168366 tcactaatttccctcgctaattttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 38619865 - 38619984
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||   ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38619865 agggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatttccctcgctaa 38619964  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  38619965 ttttgctttttctagtagtg 38619984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 2275817 - 2275677
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| ||| || | |||||||||||||||||||||||||||    
T  2275817 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 2275718  T
Q  472 tcactaatttccctcgctaa-ttttgccttttctagtagtg 511  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  2275717 tcactaatttccctcgctaatttttgttttttctagtagtg 2275677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 382 - 510
Target Start/End: Complemental strand, 4627207 - 4627079
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || |||||||| || ||||| |||||||||| |||||||| ||||||||| || |||||||||||||||||||||||||||||||| ||||||    
T  4627207 aaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaattt 4627108  T
Q  482 ccctcgctaattttgccttttctagtagt 510  Q
    |||||||||||||||| ||||||||||||    
T  4627107 ccctcgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 38645768 - 38645888
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||||||||| |||||||||| ||||| ||||||   |||||||||||||||||||||||||||||| ||||||||||||||||    
T  38645768 agggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatttccctcgctaa 38645867  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  38645868 ttttgctttttctagtagtga 38645888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 22128451 - 22128312
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||| ||||||| ||||| |||||| | ||||||||||  |||| ||||||||||    
T  22128451 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccg 22128352  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||| || ||||||  |||||||||||||    
T  22128351 tcactaatttccctccctgattttgttttttctagtagtg 22128312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 30269127 - 30268988
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  |||||||| || ||||| ||||||||||||||||||| ||||| ||||||   |||||| ||||||||||||||||||||    
T  30269127 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccg 30269028  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  30269027 tcactgatttccctcgctaattttgctttttctagtagtg 30268988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 30283062 - 30283201
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  |||||||| || ||||| ||||||||||||||||||| ||||| ||||||   |||||| ||||||||||||||||||||    
T  30283062 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccg 30283161  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  30283162 tcactgatttccctcgctaattttgctttttctagtagtg 30283201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 392 - 510
Target Start/End: Complemental strand, 24682446 - 24682328
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||||  ||||| ||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  24682446 agggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctccctaa 24682347  T
Q  492 ttttgccttttctagtagt 510  Q
    |||| | ||||||||||||    
T  24682346 tttttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 394 - 511
Target Start/End: Original strand, 44783502 - 44783620
Alignment:
Q  394 ggaaaacgtgaaatccctct-ctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaat 492  Q
    ||||||| |||||||||||| |||||||||||| || ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||| |    
T  44783502 ggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctagt 44783601  T
Q  493 tttgccttttctagtagtg 511  Q
    ||||| |||||||||||||    
T  44783602 tttgctttttctagtagtg 44783620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 18714910 - 18715039
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||| ||||||| ||||||||||||||||||||||||| |||||  ||||| | |||||||||||||||| ||||||||||||||| ||||    
T  18714910 aaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttattt 18715009  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||| |||| |||||||||||||    
T  18715010 ccctcgctaatattgctttttctagtagtg 18715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 33914057 - 33914198
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||| ||||| ||||||||||||||||||||||||||| ||||| ||||||  |||||| |||||||||| || |||||||    
T  33914057 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccg 33914156  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||| |||||||||| |||||||||| ||| |||||||||||    
T  33914157 tcacaaatttccctccctaattttgcttttcctagtagtgaa 33914198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 380 - 512
Target Start/End: Original strand, 36689683 - 36689815
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||||| ||||| ||||||  |||||| |||| ||||||||||||||| ||||||||    
T  36689683 ggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcattttttccatcactaat 36689782  T
Q  480 ttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||| ||||||||  |||||| |||||||    
T  36689783 ttccctcgttaattttgttttttcttgtagtga 36689815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 54539294 - 54539425
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||| |||| ||||| |||||||| ||||| |||| | | |||||||||||||||||||||||||||||||||||||    
T  54539294 aaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 54539393  T
Q  482 ccctcgctaattttgccttttctagtagtgaa 513  Q
     ||| ||||||||||| |||||||||||||||    
T  54539394 tccttgctaattttgctttttctagtagtgaa 54539425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 25026565 - 25026694
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||| ||||||||||||||||||| ||||| |||| | | |||||||||| ||||||||||||||||||||||||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaattt 25026664  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||||| | ||||||| |||||    
T  25026665 ccctcactaattttactttttctaatagtg 25026694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 5399607 - 5399747
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| | |||| | |||||||||||||||| || |||||||    
T  5399607 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccg 5399706  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||| ||||| |||| |||| ||||| ||| ||||||||||    
T  5399707 tcacaaattttcctccctaagtttgcttttcctagtagtga 5399747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 9239400 - 9239280
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||||||||||||||||||||||||||||| |  ||||| |||||| | |||||||||| |||||||||||||||||||||||||||||||| |||    
T  9239400 agggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccctcgttaa 9239301  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||| |  ||||| |||||||    
T  9239300 ttttactctttcttgtagtga 9239280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 9913276 - 9913395
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||| |||| |||||||| |||| |||||||||||||||||||| |||| ||||    
T  9913276 agggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtcactaattttcctccctaa 9913375  T
Q  492 ttttgccttttctagtagtg 511  Q
    ||||   |||||||||||||    
T  9913376 ttttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 30508005 - 30508124
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| || ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| ||||||| ||||||  |||| |||||||||    
T  30508005 agggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcctcgctaa 30508104  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  30508105 ttttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 8878881 - 8879022
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||| ||||||| ||||| ||||||   ||||| ||||  |||| ||||||||||    
T  8878881 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattttttccg 8878980  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    ||||||||||||||| || ||||||| |||||| ||||||||    
T  8878981 tcactaatttccctctctgattttgctttttcttgtagtgaa 8879022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 14944764 - 14944853
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  14944764 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtcactaattt 14944853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 372 - 497
Target Start/End: Original strand, 25147719 - 25147844
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||| || |||||||    
T  25147719 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 25147818  T
Q  472 tcactaatttccctcgctaattttgc 497  Q
    |||  |||||||||| ||||||||||    
T  25147819 tcataaatttccctctctaattttgc 25147844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 392 - 514
Target Start/End: Complemental strand, 9059071 - 9058949
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||||||||||||||||||| || ||||| |||||| | |||||||||| ||||| || ||||| ||||| |||||||||| ||||    
T  9059071 agggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctccctaa 9058972  T
Q  492 ttttgccttttctagtagtgaac 514  Q
    |||||| ||| ||||||||||||    
T  9058971 ttttgcttttcctagtagtgaac 9058949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 507
Target Start/End: Original strand, 38223511 - 38223643
Alignment:
Q  375 gtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtca 474  Q
    |||| |||||||| |  ||||||||||  ||||||||||||||||| ||||||| ||||| |||||| | ||||||| |||||||| |||||||||||||    
T  38223511 gtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtca 38223610  T
Q  475 ctaatttccctcgctaattttgccttttctagt 507  Q
    ||||| |||||| |||||||| | |||||||||    
T  38223611 ctaatctccctccctaattttacattttctagt 38223643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 404 - 512
Target Start/End: Original strand, 42055427 - 42055535
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttc 503  Q
    ||||| ||| |||||||||| |||| ||||| |||||| | |||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||||    
T  42055427 aaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccctcgctaattttgctttttc 42055526  T
Q  504 tagtagtga 512  Q
    |||||||||    
T  42055527 tagtagtga 42055535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 1638445 - 1638584
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| |||||| |||| ||||||||||||||| ||||| ||||||   ||| ||||||| |||| ||||||||||    
T  1638445 ttagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccg 1638544  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||| |||||||||  ||| |||||||||    
T  1638545 tcactaatttccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 12071960 - 12072099
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || | ||||||| | ||||||||||||||||||||||||| ||||| ||| || | ||||| ||| |||||||||||||||      
T  12071960 ttagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcattttttcga 12072059  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||| |||||||||||||| ||||||| |||||    
T  12072060 tcactaatttcgctcgctaattttgctttttctaatagtg 12072099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 4606948 - 4606829
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| |||||||| ||||||||||||||||||| ||||| || ||| |||||||||||   |||| ||||| ||||||||||||||||||| ||||    
T  4606948 agggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccctccctaa 4606849  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | ||| |||||||||    
T  4606848 ttttacttttcctagtagtg 4606829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 16915367 - 16915506
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||  ||||||| ||||||||||  ||||||| ||||| ||||||  |||||||||||  |||| |||||||||     
T  16915367 ttagtgacggaaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttcca 16915466  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||| |||| || ||||||| |||||||||||||    
T  16915467 tcactaattttcctccctgattttgctttttctagtagtg 16915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 22156740 - 22156631
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||| ||||||||  |||||     
T  22156740 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcataatttcct 22156641  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  22156640 tcactaattt 22156631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 45091282 - 45091402
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||||| |||||||||||||||||| ||||| |||             ||||||||||||||||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga-------------gaggaatttcattttttccgtcactaattt 45091368  T
Q  482 ccctcgctaattttgccttttctagtagtgaact 515  Q
    |||||||||||||||  |||||||||||||||||    
T  45091369 ccctcgctaattttgttttttctagtagtgaact 45091402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 30420149 - 30420033
Alignment:
Q  395 gaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    |||||| |||||| ||||||||||| |||||||| ||  | |||||| | ||||||| | |||||| |||||||||||||||||||| |||| |||||||    
T  30420149 gaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtcactaattttcctccctaattt 30420050  T
Q  495 tgccttttctagtagtg 511  Q
    ||| |||||||||||||    
T  30420049 tgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 12106001 - 12106120
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||  ||||||   ||||| |||| ||||| ||||||||| ||| ||||||||||||||||    
T  12106001 agggaaaacatgaaacccctctctaattccgtcactaaatttg-cgaccaaagaatttatgagaaattttattttttccatcaataatttccctcgctaa 12106099  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||| | ||||||| ||||||    
T  12106100 ttttactttttctaatagtga 12106120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 6553822 - 6553911
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||| ||| ||||||||||||||||||  || |||| ||||| |||||| ||||||| ||||| |||| ||||||||||||||||||||    
T  6553822 agggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaattt 6553911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 34557201 - 34557320
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| || |||||  ||| ||||||||||| || |||||  ||||| | ||||||||| | |||| |||||||||||||||||||| |||| ||||    
T  34557201 agggaaaaggtaaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaattttcctcactaa 34557300  T
Q  492 ttttgccttttctagtagtg 511  Q
    ||||  |||| |||||||||    
T  34557301 ttttatctttcctagtagtg 34557320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 382 - 441
Target Start/End: Complemental strand, 37761971 - 37761912
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgacca 441  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  37761971 aaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 512
Target Start/End: Original strand, 3613017 - 3613134
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtga-ggaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    |||||||||||| ||||||||||| |||||||| | ||| |||||| | ||||||||| |||||||  ||||||  | ||| || ||||||| |||||||    
T  3613017 aaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttattttttttagccaccaaattccctccctaattt 3613116  T
Q  495 tgccttttctagtagtga 512  Q
    ||| ||||||| ||||||    
T  3613117 tgctttttctaatagtga 3613134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 313605 - 313694
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||| ||| ||||||||||||||||||  || |||| ||||| ||||||   ||||| ||||| |||| ||||||||||||||||||||    
T  313605 agggataacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaattt 313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 510
Target Start/End: Original strand, 29238429 - 29238559
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| || ||| ||||| | ||||| || |||||||| ||||||| |||||   ||||   ||||||||||  |||| ||||||||||||| ||||    
T  29238429 ggaaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattttttccgtcaataat 29238528  T
Q  480 ttccctcgctaattttgccttttctagtagt 510  Q
    ||||||| ||| |||||  ||| ||||||||    
T  29238529 ttccctccctagttttgtttttcctagtagt 29238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 496
Target Start/End: Original strand, 39234940 - 39235063
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcat-tttttcc 470  Q
    ||||||| |||||||| |  | |||||||||||||||  |||||||||  || |||| ||||| ||||||  ||||||||||| ||||| || |||||||    
T  39234940 ttagtgagggaaatttagagaaggaaaacgtgaaatc--tctctaattttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtttttcc 39235037  T
Q  471 gtcactaatttccctcgctaattttg 496  Q
    || || | |||||||| |||||||||    
T  39235038 gttacaagtttccctccctaattttg 39235063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 512
Target Start/End: Original strand, 23104371 - 23104487
Alignment:
Q  397 aaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttccgtcactaatttccctcgctaatttt 495  Q
    |||| |||||||||||||||||   ||| ||| ||||| |||||||  ||||||||| |||||| | ||||||||||| || ||||   || ||||||||    
T  23104371 aaacatgaaatccctctctaatcatgtccctaaattttgcgaccatagaatttgtgatgaattttatttttttccgtccctgatttttgtccctaatttt 23104470  T
Q  496 gccttttctagtagtga 512  Q
    |  ||| ||||||||||    
T  23104471 gtttttcctagtagtga 23104487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 3e-56; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 9652574 - 9652713
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  9652574 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccg 9652673  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  9652674 tcactaatttccctcgccaattttgctttttctagtagtg 9652713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 372 - 518
Target Start/End: Original strand, 19223445 - 19223591
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| ||  |||||||||| ||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 19223544  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaactatg 518  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  19223545 tcaccaatttccctcgctaattttgctttttctagtagtgaactatg 19223591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 372 - 504
Target Start/End: Original strand, 18539800 - 18539932
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  18539800 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccg 18539899  T
Q  472 tcactaatttccctcgctaattttgccttttct 504  Q
    ||||||||||||||| |||||||||| ||||||    
T  18539900 tcactaatttccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 18104669 - 18104530
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  18104669 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccg 18104570  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||| |||||||||||||||||||||| |||||||||||||    
T  18104569 tcaataatttccctcgctaattttgctttttctagtagtg 18104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 372 - 504
Target Start/End: Complemental strand, 4393489 - 4393357
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||    
T  4393489 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccg 4393390  T
Q  472 tcactaatttccctcgctaattttgccttttct 504  Q
    ||||||||||||||| |||||||||| ||||||    
T  4393389 tcactaatttccctcactaattttgctttttct 4393357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 27449084 - 27449224
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  27449084 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 27449183  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  27449184 tcactaatttccctcgctaattttgctttttctagtagtga 27449224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 48404866 - 48404997
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 48404965  T
Q  482 ccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||| |||||||||||||||    
T  48404966 ccctcgctaattttgctttttctagtagtgaa 48404997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 372 - 510
Target Start/End: Original strand, 11915754 - 11915892
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||| |||||||    
T  11915754 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccg 11915853  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagt 510  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  11915854 tcactaatttccctcgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 5260933 - 5261074
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||| | || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  5260933 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 5261032  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  5261033 tcactaatttccctcactaattttgctttttctagtagtgaa 5261074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 11007822 - 11007682
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  11007822 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccg 11007723  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||||||||||||  |||||||||| ||||||||||||||    
T  11007722 tcactaatttcccttactaattttgctttttctagtagtga 11007682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 380 - 512
Target Start/End: Original strand, 29956376 - 29956508
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  29956376 ggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcactaat 29956475  T
Q  480 ttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||| | ||||||||||||||    
T  29956476 ttccctcgctaattttactttttctagtagtga 29956508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 380 - 512
Target Start/End: Original strand, 30005531 - 30005663
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  30005531 ggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcactaat 30005630  T
Q  480 ttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||| | ||||||||||||||    
T  30005631 ttccctcgctaattttactttttctagtagtga 30005663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 11219134 - 11219273
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||||||| || ||||| |||| ||| |||||||||| ||||||||||||||||    
T  11219134 ttagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccg 11219233  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  11219234 tcactaatttccctcgctaattttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 19270003 - 19269864
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||||||||| |||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  19270003 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19269904  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  19269903 tcactaatttccctcgctaattttgctttttctaatagtg 19269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 25882566 - 25882705
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||    
T  25882566 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccg 25882665  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  25882666 tcactaatttccctcgctaattttgctttttctaatagtg 25882705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 372 - 502
Target Start/End: Complemental strand, 29704171 - 29704041
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| || ||||||||||||||||||| |||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||    
T  29704171 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattttttccg 29704072  T
Q  472 tcactaatttccctcgctaattttgcctttt 502  Q
    |||||||||||||||||||||||||| ||||    
T  29704071 tcactaatttccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 13921331 - 13921460
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  13921331 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 13921430  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
     ||||||||||||||| |||||||||||||    
T  13921431 tcctcgctaattttgctttttctagtagtg 13921460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 8428167 - 8428307
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||| ||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||    
T  8428167 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 8428266  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||||||||||||||||||||||   ||||||||||||||    
T  8428267 tcactaatttccctcgctaattttattttttctagtagtga 8428307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 26098829 - 26098949
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  26098829 agggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccctcgctaa 26098928  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  26098929 ttttgctttttctagtagtga 26098949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 8110335 - 8110474
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||| ||||||||||||||||| || ||||| |||||| | |||||||||||||||||||||||||||    
T  8110335 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccg 8110434  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  8110435 tcactaatttccctcactaattttgctttttctagtagtg 8110474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 13905157 - 13905038
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13905157 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgctctctaa 13905058  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  13905057 ttttgctttttctagtagtg 13905038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 18091686 - 18091547
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| | ||||||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||    
T  18091686 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccg 18091587  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  18091586 tcactaatttccctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 26390773 - 26390634
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| ||||||| ||||| ||| ||||||||||||||||||||||||||| |||||  ||||| | |||||||||||||||||||||||||||    
T  26390773 ttagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccg 26390674  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  26390673 tcactaatttctctcgctaattttgctttttctagtagtg 26390634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 29236050 - 29236181
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||| |||||||| ||||||||||||||||||||||||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaattt 29236149  T
Q  482 ccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||| ||||||| |||||||    
T  29236150 ccctcgctaattttgctttttctaatagtgaa 29236181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 43329882 - 43329763
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| || |||||| |||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  43329882 agggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 43329783  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  43329782 ttttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 372 - 513
Target Start/End: Complemental strand, 7623670 - 7623529
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||   ||| |||||| ||||||||||||||||    
T  7623670 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattttttccg 7623571  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||||| ||||| | |||||||||||||||    
T  7623570 tcactaatttccctcgctgatttttctttttctagtagtgaa 7623529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 21816727 - 21816856
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||| |||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21816826  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||| | |||||||||||||    
T  21816827 ccctcgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 396 - 516
Target Start/End: Original strand, 8546265 - 8546385
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 495  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  496 gccttttctagtagtgaacta 516  Q
    || |||||| |||||| ||||    
T  8546365 gctttttctggtagtgtacta 8546385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 8543465 - 8543603
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||| |||||||||| |||||||     
T  8543465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttgttaggaatttca-tttttcca 8543563  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||  ||||||| |||||    
T  8543564 tcactaatttccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 373 - 511
Target Start/End: Complemental strand, 1311097 - 1310959
Alignment:
Q  373 tagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgt 472  Q
    |||||| |||||||| || | ||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||| |||||||||||||||    
T  1311097 tagtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgt 1310998  T
Q  473 cactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||| ||| ||||||||||| |||||||||||||    
T  1310997 cactaattttccttgctaattttgctttttctagtagtg 1310959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 17582440 - 17582331
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  17582440 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccg 17582341  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  17582340 tcactaattt 17582331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 18380020 - 18380160
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||  | |||||||| || |||||||||| |||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||    
T  18380020 ttagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccg 18380119  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||| |||||||||||||||||| | ||||||||||||||    
T  18380120 tcactgatttccctcgctaattttactttttctagtagtga 18380160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 10941784 - 10941665
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||  ||||    
T  10941784 agggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttactaa 10941685  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  10941684 ttttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 17762638 - 17762777
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||| ||||||||||||||||||| |||||  ||||| | |||||||||||||||||||||||||||    
T  17762638 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccg 17762737  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||   ||||||||||||    
T  17762738 tcactaatttccctcgctaattttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 19063958 - 19064097
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||| ||||||||||||||||||| |||||  ||||| | |||||||||||||||||||||||||||    
T  19063958 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccg 19064057  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||   ||||||||||||    
T  19064058 tcactaatttccctcgctaattttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 373 - 512
Target Start/End: Original strand, 19610335 - 19610474
Alignment:
Q  373 tagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgt 472  Q
    |||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| || ||||||||    
T  19610335 tagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgt 19610434  T
Q  473 cactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||| |||||||||| |||||||||| ||| ||||||||||    
T  19610435 cacaaatttccctccctaattttgcttttcctagtagtga 19610474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 392 - 513
Target Start/End: Original strand, 23773493 - 23773614
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||| |||||||||||||||||||  ||||    
T  23773493 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatttcccttactaa 23773592  T
Q  492 ttttgccttttctagtagtgaa 513  Q
    |||||  |||||||||||||||    
T  23773593 ttttgttttttctagtagtgaa 23773614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 3461429 - 3461309
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||||||||||||||||| || ||||| ||| || |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  3461429 agggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatttccttcgctaa 3461330  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  3461329 ttttgctttttctagtagtga 3461309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 1745606 - 1745488
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  1745606 agggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaatttccctcgctaa 1745508  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||| ||||||||    
T  1745507 ttttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 386 - 481
Target Start/End: Original strand, 6718720 - 6718815
Alignment:
Q  386 tttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6718720 tttgtgagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 6718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 11837333 - 11837214
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||    
T  11837333 agggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccatcacgaatttccctcgctaa 11837234  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||  |||||||||||||    
T  11837233 ttttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 16299857 - 16299996
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| || |||||||    
T  16299857 ttagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 16299956  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||| ||| |||||||||| ||| |||||||||    
T  16299957 tcacaaatttcgctccctaattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 5565738 - 5565857
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||  ||||||| ||||| |||||| ||||||||||||  |||| ||||||||||||||||||||||||| || |    
T  5565738 agggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccctccctga 5565837  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  5565838 ttttgctttttctagtagtg 5565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 30219334 - 30219473
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||| ||||| ||||||||||||||||||||||||||| ||||| ||||||  |||||| |||||||||| || |||||||    
T  30219334 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccg 30219433  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||||| ||| |||||||||    
T  30219434 tcacaaatttccctccctaattttgcttttcctagtagtg 30219473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 19545506 - 19545615
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||| ||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19545605  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  19545606 tcactaattt 19545615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 26830581 - 26830440
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttcc 470  Q
    ||||||| |||||||| |  ||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||||||||||| | ||||||||    
T  26830581 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttcc 26830482  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||| |||||| |||| |||||||| | ||||||| ||||||    
T  26830481 gtcattaattttcctccctaatttttctttttctaatagtga 26830440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 382 - 495
Target Start/End: Original strand, 28859597 - 28859710
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||| ||||||| ||||||||||||||||||||||||| ||||| | |||| | |||||||||||||||||||||||||||||||||||||    
T  28859597 aaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattt 28859696  T
Q  482 ccctcgctaatttt 495  Q
     |||||||||||||    
T  28859697 tcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 29215988 - 29216129
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| |||||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||| || |||||||    
T  29215988 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 29216087  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||| ||||| ||||  ||||||||| ||| |||||||||||    
T  29216088 tcacaaattttcctccataattttgcttttcctagtagtgaa 29216129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 372 - 508
Target Start/End: Original strand, 1628211 - 1628347
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  |||||||||||||||||||||||||||| |||||||| |||||||||| | | ||||| |||||||||| |||||||||     
T  1628211 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttcca 1628310  T
Q  472 tcactaatttccctcgctaattttgccttttctagta 508  Q
    ||| ||||||||||| |||||||| | ||||||||||    
T  1628311 tcattaatttccctccctaattttactttttctagta 1628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 380 - 511
Target Start/End: Original strand, 10803724 - 10803856
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttccgtcactaa 478  Q
    |||||||| || ||||||||||| |||| ||||| ||||||||||| || ||||| |||||| |||||||||||||||||||| |||||||||||| |||    
T  10803724 ggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttccgtcattaa 10803823  T
Q  479 tttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||| ||||||| || |||||||||||||    
T  10803824 tttccctccctaatttggctttttctagtagtg 10803856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 11085481 - 11085342
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  ||||||| || |||||||  |||||||||||||||||||||||||||| ||||| ||||||   ||||| |||||||||||||||||||||    
T  11085481 ttagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattttttccg 11085382  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    | ||| ||||| |||||||||||| | |||||||||||||    
T  11085381 ttactgatttctctcgctaattttactttttctagtagtg 11085342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 15064111 - 15063992
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| |||||| | |||||||||||||||| || ||||||||||| |||||||||| ||||    
T  15064111 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaa 15064012  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| |||||||||    
T  15064011 ttttgcttttcctagtagtg 15063992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 23217327 - 23217208
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||  |||||||||||||||| ||||||||| ||| ||||||||||| ||||    
T  23217327 agggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattttttccctcattaatttccctccctaa 23217228  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||| ||||||||    
T  23217227 tttttctttttttagtagtg 23217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 46942503 - 46942622
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||| |||| |||||||| |||| |||||||| ||||||||||||| || ||||    
T  46942503 agggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtcactaatttccttccctaa 46942602  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||  |||||||||||||    
T  46942603 ttttgatttttctagtagtg 46942622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 375 - 512
Target Start/End: Original strand, 31250087 - 31250224
Alignment:
Q  375 gtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtca 474  Q
    |||| |||||||| |  |||||||||   ||||||||||||||||| ||||||| ||||| |||||| ||||||||| |||||||| |||||||||||||    
T  31250087 gtgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtca 31250186  T
Q  475 ctaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||| | |||| |||||||||| ||||||||||||||    
T  31250187 ctaatcttcctccctaattttgcattttctagtagtga 31250224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 372 - 508
Target Start/End: Original strand, 28389969 - 28390105
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |||||||||||||||||| |||||||||||||||||| ||||| ||||||   ||||||||||  |||| ||||||||||    
T  28389969 ttagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccg 28390068  T
Q  472 tcactaatttccctcgctaattttgccttttctagta 508  Q
    |||||||||| |||| || ||||| | ||||||||||    
T  28390069 tcactaattttcctctctgattttactttttctagta 28390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 36543745 - 36543885
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| ||||| ||||||   ||| ||||||  |||| |||||||||     
T  36543745 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattttttcca 36543844  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||| |||| |||||||| | ||||||||||||||    
T  36543845 tcactaattttcctccctaatttttctttttctagtagtga 36543885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 21490153 - 21490034
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| || ||||||||||||||||| ||||||| ||||| |||||| | |||||||||| ||||||||||||||||||| | ||||||||| ||||    
T  21490153 agggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatttccctcactaa 21490054  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||  |||||||||||||    
T  21490053 ttttgttttttctagtagtg 21490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 31433753 - 31433872
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| | |||||||||| ||||| ||||||||  ||||||||||||||  ||||    
T  31433753 agggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattttttctatcactaatttccctatctaa 31433852  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||| ||||||||    
T  31433853 ttttactttttttagtagtg 31433872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 402 - 513
Target Start/End: Original strand, 37283549 - 37283660
Alignment:
Q  402 tgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttt 501  Q
    ||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||| || ||||||||||| |||||||||| |||||||||| |||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 37283648  T
Q  502 tctagtagtgaa 513  Q
     ||| |||||||    
T  37283649 cctaatagtgaa 37283660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 392 - 513
Target Start/End: Original strand, 21020081 - 21020202
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| | |||||| |||||||||||||||||| ||||| | |||| | ||||||||||  |||| ||||||||||||||||||||||||| ||||    
T  21020081 agggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctaa 21020180  T
Q  492 ttttgccttttctagtagtgaa 513  Q
    |||||| ||| |||||||||||    
T  21020181 ttttgcttttcctagtagtgaa 21020202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 6088347 - 6088227
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||| ||||||||||||| | || |||||  ||||| | ||||| |||||||||||||||||||||||||||||||||||  || |    
T  6088347 agggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatttcccttactta 6088248  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  6088247 ttttgctttttctagtagtga 6088227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 495
Target Start/End: Original strand, 49915447 - 49915570
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||| | ||||||||| ||| |||| || |||||||    
T  49915447 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccg 49915546  T
Q  472 tcactaatttccctcgctaatttt 495  Q
    |||| ||||||||||  |||||||    
T  49915547 tcacaaatttccctctttaatttt 49915570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 372 - 510
Target Start/End: Original strand, 27968911 - 27969049
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||| |||| || ||||| ||||||  |||  ||||||  |||| |||| |||||    
T  27968911 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttatttgttccg 27969010  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagt 510  Q
    ||||||||||||||| || ||||||| ||||||||||||    
T  27969011 tcactaatttccctccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 402 - 511
Target Start/End: Complemental strand, 17269713 - 17269604
Alignment:
Q  402 tgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttt 501  Q
    ||||||||||||||||||||||||||| ||||| ||| ||   |||||||||||||||| ||||||||| ||  |||||||| ||||||||||||| |||    
T  17269713 tgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccatcgctaattttgctttt 17269614  T
Q  502 tctagtagtg 511  Q
    ||||||||||    
T  17269613 tctagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 36564578 - 36564438
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||| |||||||| ||| | ||||||   ||| ||| ||| |||| |||||||||     
T  36564578 ttagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattttttcca 36564479  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||| |||| |||||||| | ||||||||||||||    
T  36564478 tcactaattttcctccctaatttttctttttctagtagtga 36564438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 5744432 - 5744551
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| |||| | | ||||||||||| |||| || ||||||||||| ||||| |||| ||||    
T  5744432 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcctccctaa 5744531  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| |||||||||    
T  5744532 ttttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 5781391 - 5781510
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| |||| | | ||||||||||| |||| || ||||||||||| ||||| |||| ||||    
T  5781391 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcctccctaa 5781490  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| |||||||||    
T  5781491 ttttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 46012847 - 46012728
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||  ||||||| ||||| ||| || | ||||||||||  |||| |||||||||||||||||||| |||| || |    
T  46012847 agggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaattttcctccctga 46012748  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  46012747 ttttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 47263394 - 47263264
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||  || ||||| || ||||||| ||||| |||||| | |||||||||||||||| |||||||| ||||| |||||    
T  47263394 aaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaattt 47263295  T
Q  482 ccctcgctaattttgccttttctagtagtga 512  Q
    || ||| ||||||||| ||||||||||||||    
T  47263294 ccttcgttaattttgctttttctagtagtga 47263264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 381 - 512
Target Start/End: Original strand, 29451099 - 29451231
Alignment:
Q  381 gaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 480  Q
    ||||||| || ||||||||||| ||||||||||||||||||||| | | ||||| | ||   | ||||| |||| |||||||||||||||||||||||||    
T  29451099 gaaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattttttccgtcactaatt 29451198  T
Q  481 tccctcgctaattttg-ccttttctagtagtga 512  Q
    ||||||| ||||||||   ||||||||||||||    
T  29451199 tccctcgttaattttgtttttttctagtagtga 29451231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 50665755 - 50665636
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||||||||||||| |||||||| ||||| ||| ||   |||||||||||||||| || ||||||||||  |||||||||| ||||    
T  50665755 agggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatttccctctctaa 50665656  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||  ||||||||    
T  50665655 ttttgcttttcttagtagtg 50665636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 10772183 - 10772053
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttccgtcactaatt 480  Q
    |||||| || ||||||||  |||||||||||||||||| ||||| || ||||| |||| |  |||||||||| ||||| || ||||||| ||||||||||    
T  10772183 aaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaattccatttttttctgtcactaatt 10772084  T
Q  481 tccctcgctaattttgccttttctagtagtg 511  Q
    ||||||| ||||||| | |||||||||||||    
T  10772083 tccctcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 21088758 - 21088885
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||| ||||||||||||| ||||||||||  | ||||| |||||| | ||||||||||  |||| ||||||||||||||||||||    
T  21088758 aaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag--attttattttttccgtcactaattt 21088855  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||| ||||| |||  ||||||||    
T  21088856 ccctccctaactttgcttttcttagtagtg 21088885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 15490031 - 15490170
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || || ||||||||||||||||||| |||||  ||||||| ||||| ||||||  |||||||||||  |||| ||||||| ||    
T  15490031 ttagtgagggaaatttagtgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcg 15490129  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||||||||  ||| || ||||||| |||| |||||||||    
T  15490130 tcactaatttttctccctgattttgctttttttagtagtga 15490170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 393 - 512
Target Start/End: Complemental strand, 15501670 - 15501550
Alignment:
Q  393 gggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcatt-ttttccgtcactaatttccctcgctaa 491  Q
    ||||||| || |||| | |||||||||||||| ||| ||||||||| || ||||||| ||| |||||||||| |||||||||| ||||||  ||||||||    
T  15501670 gggaaaatgtaaaattcatctctaattccgtccctaaattttacgatcaagaaatttatgaagaatttcatttttttccgtcattaatttttctcgctaa 15501571  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||| | ||||||||||||||    
T  15501570 ttttactttttctagtagtga 15501550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 20615482 - 20615345
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  | |||||||||||||| |||||||||||| |||| || ||||||||||||  |||||||||||  |||| ||||||||||    
T  20615482 ttagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccg 20615383  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    || ||||||| ||||  |||||||  |||||||| |||||    
T  20615382 tctctaattttcctccttaatttt--cttttctaatagtg 20615345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 416 - 511
Target Start/End: Complemental strand, 20762045 - 20761950
Alignment:
Q  416 aattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||| ||||||| ||||| |||||| | ||||||||||  |||| ||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 380 - 506
Target Start/End: Complemental strand, 26963380 - 26963254
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| || |||||||| || |||| ||||||||||||||| |||| ||||||| ||||    |||||| |  ||||||||||||| ||||||||||    
T  26963380 ggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcactaat 26963281  T
Q  480 ttccctcgctaattttgccttttctag 506  Q
    |||||||| ||||||||  ||||||||    
T  26963280 ttccctcgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 27212920 - 27212811
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  ||| |||||||||||||||||| |||||||||||||| ||||| |||| |   ||||||||||| |||| ||||||||      
T  27212920 ttagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttattttttcta 27212821  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  27212820 tcactaattt 27212811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 511
Target Start/End: Complemental strand, 27182786 - 27182658
Alignment:
Q  381 gaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 480  Q
    ||||||| || |||||||||  |||||| |||||||||| |||||||| || ||  ||||| |  |||||||||| |||| |||||||  ||||||||||    
T  27182786 gaaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggattttatttttt--gtcactaatt 27182689  T
Q  481 tccctcgctaattttgccttttctagtagtg 511  Q
    |||||| |||||||||  ||| |||||||||    
T  27182688 tccctccctaattttgtttttcctagtagtg 27182658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 6447305 - 6447246
Alignment:
Q  452 gaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||| ||| |||||||||    
T  6447305 gaggaattttattttttccatcactaatttccctccctaattttgcttttcctagtagtg 6447246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 511
Target Start/End: Original strand, 13615433 - 13615550
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 493  Q
    |||||||||||||| ||||||||||| | |||||| ||||| ||   | |||||||||||||  ||| |||| ||||||||||| ||| | |  ||||||    
T  13615433 ggaaaacgtgaaattcctctctaatttcatcactaaattttgcggttaagaaatttgtgaggggttttatttcttccgtcactatttttctttcctaatt 13615532  T
Q  494 ttgccttttctagtagtg 511  Q
    |||| ||||||| |||||    
T  13615533 ttgctttttctaatagtg 13615550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 480
Target Start/End: Complemental strand, 27711285 - 27711199
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 480  Q
    ||||||| ||||||  ||||||||||||||||||| ||||| ||||||  || ||||| ||| | || ||||||||| |||||||||    
T  27711285 ggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaaaagtttgtaagggaatttattttttccttcactaatt 27711199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 35579654 - 35579608
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcacta 428  Q
    |||||| || ||||||||||| |||||||||||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcacta 35579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 509
Target Start/End: Original strand, 11386427 - 11386468
Alignment:
Q  468 tccgtcactaatttccctcgctaattttgccttttctagtag 509  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  11386427 tccgtcactaatttccatcgctaattttgctttttctagtag 11386468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 441
Target Start/End: Complemental strand, 23233282 - 23233233
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgacca 441  Q
    |||||||||||||||| |||||| |||||| |||||| ||||| ||||||    
T  23233282 agggaaaacgtgaaattcctctcaaattccttcactaaattttgcgacca 23233233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 50240762 - 50240851
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||| ||| ||||||| ||||||||||  || |||| ||||| || ||| | ||||| ||||  |||| ||||||||||||||||||||    
T  50240762 agggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaattt 50240851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 1e-55; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 372 - 502
Target Start/End: Original strand, 23975635 - 23975765
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  23975635 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 23975734  T
Q  472 tcactaatttccctcgctaattttgcctttt 502  Q
    |||||||||||||||||||||||||| ||||    
T  23975735 tcactaatttccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 12045727 - 12045866
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  12045727 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccg 12045826  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  12045827 tcactaatttccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 15060973 - 15061112
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |    
T  15060973 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcgg 15061072  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  15061073 tcactaatttccctcgctaattttgctttttctggtagtg 15061112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 36196394 - 36196533
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||    
T  36196394 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattttttccg 36196493  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  36196494 tcactaatttccctcgctaattttgctttttctagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 8108999 - 8108859
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  |||||||||| ||||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  8108999 ttagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 8108900  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  8108899 tcactaatttccctctctaattttgctttttctagtagtga 8108859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 13974217 - 13974078
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||    
T  13974217 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcatttttttcg 13974118  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    || ||||||||||||||||||||||| |||||||||||||    
T  13974117 tcgctaatttccctcgctaattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 4125307 - 4125187
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4125307 agggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 4125208  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||| | ||||||||||||||    
T  4125207 ttttactttttctagtagtga 4125187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 618294 - 618433
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  618294 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 618393  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  618394 tcactaatttccctcgctaattttgctttttctaatagtg 618433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 746987 - 746868
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  746987 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 746888  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||| ||||||    
T  746887 ttttgctttttcttgtagtg 746868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 7888797 - 7888936
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||||| |||||||||||||| |||||||||| |||||||||||| | |||||||||||||||||||||||||||    
T  7888797 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 7888896  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||| |||||||||||||||||||||| |||||||||||||    
T  7888897 tcaataatttccctcgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 17039770 - 17039631
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||| | || ||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  17039770 ttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 17039671  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||| |||| |||||||||| |||||||||||||    
T  17039670 tcactaattttcctcactaattttgctttttctagtagtg 17039631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 380 - 511
Target Start/End: Complemental strand, 28265606 - 28265475
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  28265606 ggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaat 28265507  T
Q  480 ttccctcgctaattttgccttttctagtagtg 511  Q
    || ||||||||||||| | |||||||||||||    
T  28265506 tttcctcgctaattttactttttctagtagtg 28265475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 38837790 - 38837670
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  38837790 agggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 38837691  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  38837690 ttttgctttttctagtagtga 38837670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 16121978 - 16121839
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| |||||  ||||| | |||||||||||||||| ||||||||||    
T  16121978 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccg 16121879  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  16121878 tcactaatttccctcgctaattttgctttttctagtagtg 16121839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 26708714 - 26708583
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||| |||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||| |||||||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26708615  T
Q  482 ccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||| |||||||||||||||    
T  26708614 ccctcgctaattttgcattttctagtagtgaa 26708583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 26978448 - 26978317
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||| |||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||| |||||||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26978349  T
Q  482 ccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||| |||||||||||||||    
T  26978348 ccctcgctaattttgcattttctagtagtgaa 26978317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 36716339 - 36716200
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | ||||||||| |||||||||||||||||| ||||||||||| ||| || |||||||||||||  ||||||||||||||||||||||||||     
T  36716339 ttagtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgaggaatttcattttttcca 36716240  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  36716239 tcactaatttccctcgctaattttgttttttctagtagtg 36716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 7003867 - 7003730
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||||||||||||  |||||||||||||||||| ||||| ||| |||| ||||||||||||||||  |||||||||    
T  7003867 ttagtgagggaaattttgtgagggaaaacgtgaaatc--tctctaattccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccg 7003770  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  7003769 tcactaatttccctcgctaattttgttttttctagtagtg 7003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 23408980 - 23409120
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttcc 470  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||| ||||||||    
T  23408980 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttcc 23409079  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||  |||||||||||||| |||||||||||||    
T  23409080 gtcactaatttttctcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 8886990 - 8886851
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |||||||| || ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||| ||    
T  8886990 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcg 8886891  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| ||||| ||||||||||||||| |||||||||||||    
T  8886890 tcacaaattttcctcgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 10494757 - 10494876
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||     
T  10494757 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctac 10494856  T
Q  492 ttttgccttttctagtagtg 511  Q
     ||||| |||||||||||||    
T  10494857 atttgctttttctagtagtg 10494876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 12328365 - 12328226
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| |||||| |||||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||||||    
T  12328365 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccg 12328266  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    | ||||||||||||| |||||||||| |||||||||||||    
T  12328265 ttactaatttccctcactaattttgctttttctagtagtg 12328226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 394 - 511
Target Start/End: Complemental strand, 16631991 - 16631874
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 493  Q
    ||||||||| ||||||||||||||||||||||||| |||||  ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16631991 ggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 16631892  T
Q  494 ttgccttttctagtagtg 511  Q
    || | |||||||||||||    
T  16631891 tttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 2472833 - 2472714
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||||||||||||||||||| || ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || ||||    
T  2472833 agggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccttcactaa 2472734  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  2472733 ttttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 33818700 - 33818561
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| || |||||||    
T  33818700 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 33818601  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| | |||||||| |||||||||||||    
T  33818600 tcacaaatttccctccccaattttgctttttctagtagtg 33818561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 35620462 - 35620344
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||| |||||||||||||||||| ||||| |||||| | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  35620462 agggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattt-attttttccgtcactaatttccctcgctaa 35620364  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||||||| |||||    
T  35620363 ttttgctttttctaatagtg 35620344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 375 - 513
Target Start/End: Complemental strand, 25652719 - 25652581
Alignment:
Q  375 gtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtca 474  Q
    |||| |||||||| || |||||||| || ||||||||||||||||||||||| | ||||| |||| | | ||||||||||||||||||||||||| ||||    
T  25652719 gtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattttttctgtca 25652620  T
Q  475 ctaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    || |||||||||||||||||||| ||||||| |||||||    
T  25652619 ctgatttccctcgctaattttgctttttctaatagtgaa 25652581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 24138970 - 24138841
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||| ||||||||||||||||||| ||||| |||||| | |||||||||| |||||||||||||||||||| |||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattt 24138871  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
     ||||||||||||||| ||||||| |||||    
T  24138870 tcctcgctaattttgctttttctaatagtg 24138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 36832029 - 36831889
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |||||||| || |||||||||||||||||| |||||| |||||  ||||| | ||||| |||||||||||||||||| ||    
T  36832029 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcatttttttcg 36831930  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    || |||||||||||| |||||||||| ||||||||||||||    
T  36831929 tccctaatttccctcactaattttgctttttctagtagtga 36831889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 20959508 - 20959647
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  ||||||||||||||||| ||||||||||||||||||| |||||||||| | | |||||||||||||||| ||||||||||    
T  20959508 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccg 20959607  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||| | |||| |||| |||||||| | |||||||||||||    
T  20959608 tcagtgattttcctccctaattttactttttctagtagtg 20959647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 40484064 - 40484183
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||||| | || ||||||||| ||||||||||||||||||||||||||    
T  40484064 agggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatttccctcgctaa 40484163  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||||||||||||    
T  40484164 tttttctttttctagtagtg 40484183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 5982655 - 5982785
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttccgtcactaatt 480  Q
    |||||| || ||||||||| | ||||||||||||||||||||||||| | ||| |||||| | ||||||||||||||| || ||||||||||||||||||    
T  5982655 aaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccatttttttccgtcactaatt 5982754  T
Q  481 tccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||| ||||||| |||||||||||||    
T  5982755 tccctcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 13620266 - 13620127
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||| ||||| | ||||| ||||||  |||||||||||  |||| ||||||||||    
T  13620266 ttagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccg 13620167  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||| || ||||| | |||||||||||||    
T  13620166 tcactaatttccctccctgatttttctttttctagtagtg 13620127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 392 - 510
Target Start/End: Complemental strand, 17772087 - 17771969
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| | ||||| ||||||||||||||||||| ||||| ||| || | ||||| ||||||||||||||||||||||||||||||||||||||| |    
T  17772087 agggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatttccctcgctga 17771988  T
Q  492 ttttgccttttctagtagt 510  Q
    |||| | ||||||||||||    
T  17771987 tttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 17036531 - 17036412
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||  ||||||||||||||||| ||||||| ||||| |||||| | |||||||||||||||| |||| ||||||||||||| || ||| ||||    
T  17036531 agggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcactaatctcgctccctaa 17036432  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  17036431 ttttgcattttctagtagtg 17036412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 17986729 - 17986868
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| |||||| | |||||||||||||||||| ||||| |||| | | ||||||||| |||||||||||||||||    
T  17986729 ttagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattttttccg 17986828  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||| ||| |||||||| | |||||||| ||||    
T  17986829 tcactaatttctctcactaattttactttttctagcagtg 17986868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 23423895 - 23423756
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  ||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| | |||| | |||||||||||||||| || |||| ||    
T  23423895 ttagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtttttcg 23423796  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||||| | | |||||||||    
T  23423795 tcacaaatttccctccctaattttgcttatcctagtagtg 23423756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 25397907 - 25397788
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||||||   ||||||||| |||||| || ||||||||||| |||||||||| ||||    
T  25397907 agggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatttccctccctaa 25397808  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| |||||||||    
T  25397807 ttttgcttttcctagtagtg 25397788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 394 - 511
Target Start/End: Complemental strand, 11927903 - 11927786
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 493  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| | | ||||||||||| |||| ||||||||| || |||||||  ||| ||||||    
T  11927903 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttccatctctaatttatctccctaatt 11927804  T
Q  494 ttgccttttctagtagtg 511  Q
    |||| ||||||| |||||    
T  11927803 ttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 392 - 496
Target Start/End: Complemental strand, 10420371 - 10420267
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||  ||||||| ||||| ||||||  ||| |||||||| |||| ||||||||||||||||||||||||| ||||    
T  10420371 agggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccgtcactaatttccctctctaa 10420272  T
Q  492 ttttg 496  Q
    |||||    
T  10420271 ttttg 10420267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 27428131 - 27428011
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||   ||||| | || ||||| ||||||| ||||||||||||||||| ||||    
T  27428131 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcgtcactaatttccctccctaa 27428032  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||| | |||  |||||||||    
T  27428031 tttttcttttattagtagtga 27428011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 512
Target Start/End: Complemental strand, 20188070 - 20187940
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || || ||||||||  |||| ||||||||||| |||| || ||||| ||| || | |||||||||||||||| ||||||||||||||||||||    
T  20188070 aaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactaattt 20187971  T
Q  482 ccctcgctaattttgccttttctagtagtga 512  Q
    || ||||||||||||| ||| ||| ||||||    
T  20187970 ccttcgctaattttgcttttgctaatagtga 20187940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 17079405 - 17079514
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  ||||||||| | ||||||||||||||||||||||||| ||||| |||||| ||||||||| ||| |||| ||||||||||    
T  17079405 ttagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccg 17079504  T
Q  472 tcactaattt 481  Q
    || |||||||    
T  17079505 tccctaattt 17079514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 36597459 - 36597339
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| | |||| |||||||||||| ||||||| |||||||||||| | |||||||||||||||| || ||||||||||  |||||  ||| | ||    
T  36597459 agggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatttttctcccaaa 36597360  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  36597359 ttttgctttttctagtagtga 36597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 372 - 483
Target Start/End: Complemental strand, 33816897 - 33816786
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| |||||| ||| |||||||||||||||| ||||| |||||| | |||||||||||||||| || ||||| |    
T  33816897 ttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 33816798  T
Q  472 tcactaatttcc 483  Q
    |||| |||||||    
T  33816797 tcacaaatttcc 33816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 372 - 495
Target Start/End: Complemental strand, 25673367 - 25673245
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |  |||||| ||||||||||||||||||||||||||  ||||| ||||||   ||||||| |||| ||| ||||||||||    
T  25673367 ttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgt-aggagttttattttttccg 25673269  T
Q  472 tcactaatttccctcgctaatttt 495  Q
    |||||||||| |||| ||||||||    
T  25673268 tcactaattttcctccctaatttt 25673245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 396 - 510
Target Start/End: Complemental strand, 33735088 - 33734974
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 495  Q
    ||||| ||||| |||||| |||||||||||||| ||||| |||||| | ||||| ||||| |||| ||||||||| ||| |||||| |||| ||||||||    
T  33735088 aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattttttccctcattaattttcctccctaatttt 33734989  T
Q  496 gccttttctagtagt 510  Q
    || ||| ||||||||    
T  33734988 gcttttcctagtagt 33734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 497
Target Start/End: Complemental strand, 32726865 - 32726740
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||||||||||| |  |||||||| |||||||  ||||||||||||||||||| ||||| |||||| | ||||||| | |  ||| || ||||||     
T  32726865 ttagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttcca 32726766  T
Q  472 tcactaatttccctcgctaattttgc 497  Q
    ||||||||||| ||| ||||||||||    
T  32726765 tcactaatttcgctccctaattttgc 32726740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 511
Target Start/End: Complemental strand, 23974682 - 23974576
Alignment:
Q  405 aatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttct 504  Q
    ||||||||||||||| ||||| || |||||||||| | | ||||||||||  |||| |||||||||||||||||||| |||  |||||||| | ||| ||    
T  23974682 aatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaattttccttcctaatttttcttttcct 23974583  T
Q  505 agtagtg 511  Q
    |||||||    
T  23974582 agtagtg 23974576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 5043626 - 5043541
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| ||||| || ||||||||||| ||||| |||||| ||| || ||||||||||| |||||||||||||| |||||||||||    
T  5043626 aaaacgcgaaattcccctctaattccgccactaaattttatgacgataaaatttgtgagaaatttcattttttctgtcactaattt 5043541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 396 - 468
Target Start/End: Complemental strand, 31853203 - 31853131
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcatttttt 468  Q
    ||||| ||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||| |||| |||||||    
T  31853203 aaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatttttt 31853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 35778161 - 35778277
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||||| ||| |||| || | || ||||| ||||||   ||||||||||  |||| ||||||||| ||||||||||||||| | ||    
T  35778161 agggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatttccctcccaaa 35778260  T
Q  492 ttttgccttttctagta 508  Q
    |||| | ||||||||||    
T  35778261 ttttactttttctagta 35778277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 497
Target Start/End: Complemental strand, 3080835 - 3080710
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||||| |||||| || ||||||||| ||||||||||||| |||| | ||||||  ||||  ||| |   ||||||||||  |||| |||||||||     
T  3080835 ttagtgaagaaaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattttttcca 3080736  T
Q  472 tcactaatttccctcgctaattttgc 497  Q
    |||| |||||||||  ||||||||||    
T  3080735 tcacgaatttccctacctaattttgc 3080710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 466 - 511
Target Start/End: Original strand, 16464723 - 16464768
Alignment:
Q  466 tttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||    
T  16464723 tttccgtcactaatttccctccctaattttgcctttcctagtagtg 16464768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 18413556 - 18413665
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  |||||||||||||| ||||| | ||||||||||  || |||||||||| | |||| |||||||  |||| |||||||  |    
T  18413556 ttagtgagggaaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgactaagaaacttgtgagtgattttattttttaag 18413655  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  18413656 tcactaattt 18413665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 29727939 - 29727895
Alignment:
Q  467 ttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||||||||||||||||| | |||||||||||||    
T  29727939 ttccgtcactaatttccctcgctaattttactttttctagtagtg 29727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 29727985 - 29727929
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcacta 428  Q
    ||||||| | ||||||||  |||||||||||||||| ||||||||||||||||||||    
T  29727985 ttagtgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtcacta 29727929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 16472320 - 16472182
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactaca-ttttacgaccatgaaatttgtgaggaatttcattttttcc 470  Q
    ||||||| |||||||| |  ||| |||| ||| |||| ||||||||||| ||||||| | |||| ||||||   ||||| ||| | |||| ||||||| |    
T  16472320 ttagtgacggaaatttagagaggaaaaaagtggaatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttatttttttc 16472221  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagt 510  Q
    | ||||||||| |||| | |||||||| ||||||||||||    
T  16472220 gacactaattt-cctcccaaattttgctttttctagtagt 16472182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 511
Target Start/End: Complemental strand, 19891025 - 19890986
Alignment:
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  19891025 tcactaatttccctcgctaattttgctttttctaatagtg 19890986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 435
Target Start/End: Complemental strand, 22649448 - 22649405
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacatttta 435  Q
    |||||||||||||||||| ||||||||||||||| || ||||||    
T  22649448 agggaaaacgtgaaatccttctctaattccgtcattaaatttta 22649405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 26301923 - 26301967
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttac 436  Q
    ||||||||||||||||  |||||||||||| |||||| |||||||    
T  26301923 agggaaaacgtgaaattgctctctaattccatcactaaattttac 26301967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 4e-55; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 12161814 - 12161955
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  12161814 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 12161913  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    ||| |||||| ||||||||||||| | |||||||||||||||    
T  12161914 tcaataattttcctcgctaattttactttttctagtagtgaa 12161955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 20408299 - 20408159
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||||||||||||||||||||||    
T  20408299 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 20408200  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  20408199 tcactaattttcctcgctaattttgctttttctagtagtga 20408159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 22158802 - 22158942
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |    
T  22158802 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctg 22158901  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||| | |||||| |||||||    
T  22158902 tcactaatttccctcgctaattttactttttctggtagtga 22158942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 23457897 - 23458036
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  23457897 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 23457996  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||| |||||| ||||||||||||| | |||||||||||||    
T  23457997 tcaataattttcctcgctaattttactttttctagtagtg 23458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 52183678 - 52183817
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  52183678 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccg 52183777  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||| |||||||||||| ||||||||| |||||||||||||    
T  52183778 tcattaatttccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 9110114 - 9109974
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  9110114 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 9110015  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  9110014 tcactaatttccctcgctaattttgctttttctagtagtga 9109974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 7181694 - 7181555
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||||||||  |||||||||    
T  7181694 ttagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccg 7181595  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  7181594 tcactaatttcccttgctaattttgctttttctagtagtg 7181555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 372 - 515
Target Start/End: Complemental strand, 18890688 - 18890545
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||||     
T  18890688 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcattttttcca 18890589  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaact 515  Q
    |||||||||||||||||||||||||| ||||||  |||||||||    
T  18890588 tcactaatttccctcgctaattttgctttttctgatagtgaact 18890545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 381 - 512
Target Start/End: Complemental strand, 50092428 - 50092297
Alignment:
Q  381 gaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 480  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| |||||  || |||||||||||||||||||||||||||||||||||||||||    
T  50092428 gaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaatt 50092329  T
Q  481 tccctcgctaattttgccttttctagtagtga 512  Q
    ||||||||||||||| | ||||||||||||||    
T  50092328 tccctcgctaatttttctttttctagtagtga 50092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 12720809 - 12720950
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| ||||||||||    
T  12720809 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccg 12720908  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  12720909 tcactaatttccctcgctaattttgctttttctagtagtgaa 12720950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 504
Target Start/End: Original strand, 9464103 - 9464235
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  9464103 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 9464202  T
Q  472 tcactaatttccctcgctaattttgccttttct 504  Q
    |||||||||||| || |||||||| | ||||||    
T  9464203 tcactaatttccgtcactaattttactttttct 9464235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 17661050 - 17661190
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  17661050 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccg 17661149  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||| ||| ||||||||| ||||||| ||||||    
T  17661150 tcactaatttccgtcgttaattttgctttttctaatagtga 17661190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 6412192 - 6412053
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| |||||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  6412192 ttagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 6412093  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    | |||||||||||||||||||||||| |||||||||||||    
T  6412092 ttactaatttccctcgctaattttgctttttctagtagtg 6412053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 6459217 - 6459356
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  6459217 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 6459316  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  6459317 tcactaatttccctcgctaatttcgctttttctagtagtg 6459356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 45839292 - 45839431
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  45839292 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 45839391  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  45839392 tcactaatttccctcgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 41120866 - 41120737
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaattt 41120767  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| ||||||| |||||    
T  41120766 ccctcgctaattttgctttttctattagtg 41120737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 28229574 - 28229455
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  28229574 agggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 28229475  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  28229474 ttttgctttttctagtagtg 28229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 9259322 - 9259184
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||  |||||||||    
T  9259322 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccg 9259223  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagt 510  Q
    |||||||||| ||||| ||||||||  ||||||||||||    
T  9259222 tcactaattttcctcgttaattttgttttttctagtagt 9259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 4340417 - 4340546
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 4340516  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||| ||||||||||| ||||||| |||||    
T  4340517 cccttgctaattttgctttttctaatagtg 4340546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 9985466 - 9985326
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||| || ||||||||||||   |||||||||||||||| ||||||||||    
T  9985466 ttagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccg 9985367  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||| ||||||||||  ||||||||||||||    
T  9985366 tcactaatttcccttgctaattttgttttttctagtagtga 9985326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 15243085 - 15243224
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || |||||||||||||||||||| |||||||||||||||| ||||| ||| || | |||||||||||||||||||||||||||    
T  15243085 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 15243184  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||| |||||| ||||| | |||||||||||||    
T  15243185 tcactaatttctctcgctgatttttctttttctagtagtg 15243224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 20290459 - 20290321
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  |||||||||| || ||||||||||||||  |||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||    
T  20290459 ttagtgagagaaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttcat-ttttccg 20290361  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||| | |||||||| ||||    
T  20290360 tcactaatttccctcgctaattttactttttctagcagtg 20290321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 29549418 - 29549559
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||  |||| |  ||||||||||| ||||| ||||||| ||    
T  29549418 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcg 29549517  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  29549518 tcactaatttccctcgctaattttgctttttctagtagtgaa 29549559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 8941113 - 8940993
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||| |||||||||||||||| ||| ||||||||| || | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  8941113 agggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaa 8941014  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  8941013 ttttgctttttctagtagtga 8940993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 19865264 - 19865383
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||| |||||||||||||||||||||||||| |||||||||    
T  19865264 agggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcctcgctaa 19865363  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||||||||||||    
T  19865364 ttttactttttctagtagtg 19865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 22603548 - 22603687
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||| ||||||||||||||||||| ||||| ||| ||   ||||||||||||||||||||||||||     
T  22603548 ttagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttcca 22603647  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  22603648 tcactaatttcccttgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 46339564 - 46339445
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| |||| | | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  46339564 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaa 46339465  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  46339464 ttttgctttttctagtagtg 46339445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 46790020 - 46790139
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||| ||||||||||||| || ||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  46790020 agggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 46790119  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  46790120 ttttgctttttctagtagtg 46790139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 380 - 511
Target Start/End: Original strand, 51973432 - 51973563
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    ||||||||||| |||||||| |||||||  ||||||||||||||||||| ||||| |||||||  | ||| |||||||||||||||||||||| ||||||    
T  51973432 ggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccgttactaat 51973531  T
Q  480 ttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||| |||||||||||||    
T  51973532 ttccctcgctaattttgctttttctagtagtg 51973563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 9177110 - 9177239
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||| ||||||| |||||||||| ||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  9177110 aaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaattt 9177209  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||  |||||||||||||    
T  9177210 ccctcgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 50845459 - 50845330
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| || ||||||||||| |||||    
T  50845459 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 50845360  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||||||| |||||||||||||    
T  50845359 ccctccctaattttgctttttctagtagtg 50845330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 403 - 510
Target Start/End: Complemental strand, 25788105 - 25787998
Alignment:
Q  403 gaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgcctttt 502  Q
    |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||| ||||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgcttttt 25788006  T
Q  503 ctagtagt 510  Q
    ||||||||    
T  25788005 ctagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 41752433 - 41752572
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||  ||||| ||||||||||    
T  41752433 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattttttccg 41752532  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||| || |||||||||| |||||||||||||    
T  41752533 tcactaatttccgtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 46786087 - 46785964
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||||||||||||||||||||| || ||||| |||||| | || ||||||| ||||||||||||||||||||||||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaattt 46785988  T
Q  482 ccctcgctaattttgccttttcta 505  Q
    |||||||||||||||| |||||||    
T  46785987 ccctcgctaattttgctttttcta 46785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 372 - 494
Target Start/End: Complemental strand, 41071974 - 41071852
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||| ||||    
T  41071974 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttctccg 41071875  T
Q  472 tcactaatttccctcgctaattt 494  Q
    ||||||||||||||||| |||||    
T  41071874 tcactaatttccctcgcaaattt 41071852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 14760867 - 14761006
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||| ||||||||||||||| ||||| ||||||   |||||||||||||||| || |||||||    
T  14760867 ttagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 14760966  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| ||||||||||  ||||||||| |||||||||||||    
T  14760967 tcacaaatttccctctttaattttgctttttctagtagtg 14761006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 19081748 - 19081867
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||| ||||| ||||||||| ||||||||||||||| ||||    
T  19081748 agggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccctctctaa 19081847  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||| ||||||||    
T  19081848 ttttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 19129636 - 19129755
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||| ||||| ||||||||| ||||||||||||||| ||||    
T  19129636 agggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttccatcactaatttccctctctaa 19129735  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||| ||||||||    
T  19129736 ttttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 38531309 - 38531170
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  ||||||||||||||||| |||||||||||| |||||| ||||| |||| | | |||||||||||||||| ||||||||||    
T  38531309 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccg 38531210  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||| ||||||||| |||||||| | |||||||||||||    
T  38531209 tcacttatttccctccctaattttactttttctagtagtg 38531170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 507
Target Start/End: Complemental strand, 16913716 - 16913581
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  ||||||||| |||||||||||||||||||||| | || |||||||||| | | |||||||||||||||| ||||||||||    
T  16913716 ttagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccg 16913617  T
Q  472 tcactaatttccctcgctaattttgccttttctagt 507  Q
    ||||||||||||||  |||||||||| ||| |||||    
T  16913616 tcactaatttcccttcctaattttgcttttcctagt 16913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 12989852 - 12989993
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||  ||||||||||||||||| ||| ||||||| ||||||| | ||| |||||| | |||||||||| ||||| ||||||||||    
T  12989852 ttagtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattttttccg 12989951  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||| |||||| ||| |||||||||| |||| ||||||||||    
T  12989952 tcaccaatttctctctctaattttgctttttttagtagtgaa 12989993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 32046876 - 32046985
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||| | || ||||||||||| ||||| ||||||||||||| ||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  32046876 ttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 32046975  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  32046976 tcactaattt 32046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 48522538 - 48522658
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||| |||||  ||||||||||||| ||||| ||||||  ||||||||||| ||||| |||||||| ||||||||||| |||||||||    
T  48522538 agggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctgtcactaattttcctcgctaa 48522637  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  48522638 ttttgctttttctagtagtga 48522658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 17200149 - 17200010
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||| ||||  | |||| | ||| |||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  17200149 ttagtgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccg 17200050  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||||||||||||||||  |||||||||||||    
T  17200049 tcactgatttccctcgctaattttgttttttctagtagtg 17200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 18895039 - 18894900
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| |||||||||||||||||| |||||||| ||||| ||||||   ||| ||||||| |||| ||||||| ||    
T  18895039 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttatttttttcg 18894940  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||| ||||||||||||||| ||| |||||||||    
T  18894939 tcactaattttcctcgctaattttgcttttcctagtagtg 18894900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 46865263 - 46865382
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||| |||||||||||||||||||||||| | |||| ||||| || ||| ||||||||||||| |||| ||||||||||||||||||||||||| |||     
T  46865263 agggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccgtcactaatttccctccctag 46865362  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||||||||||||    
T  46865363 tttttctttttctagtagtg 46865382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 13102316 - 13102457
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| | ||||| || |||||||||||||||| ||||| |||||| | ||||||||| |||||| || |||||||    
T  13102316 ttagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgttttccg 13102415  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||| ||||||||||  ||||||||| ||| |||||||||||    
T  13102416 tcacaaatttccctccttaattttgcttttcctagtagtgaa 13102457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 7830031 - 7830171
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||| |||||| |||||||| ||||| |||||| | |||||||||| ||||| || ||||||     
T  7830031 ttagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgttttcca 7830130  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||  |||||||||| |||||||||| ||| ||||||||||    
T  7830131 tcataaatttccctccctaattttgcttttcctagtagtga 7830171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 495
Target Start/End: Complemental strand, 22789730 - 22789607
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  ||||||||||||||||| || |||||||| ||||||| ||||| |||||||| |||||||||| ||||| || |||||||    
T  22789730 ttagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgttttccg 22789631  T
Q  472 tcactaatttccctcgctaatttt 495  Q
    |||||||||| |||| ||||||||    
T  22789630 tcactaattttcctccctaatttt 22789607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 513
Target Start/End: Complemental strand, 13308935 - 13308818
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 495  Q
    ||||| |||||||||||||||||| | |||||| ||||| ||||||  ||||||||||||||||| |||||||| | |||||||||||||| ||||||||    
T  13308935 aaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccctctctaatttt 13308836  T
Q  496 gccttttctagtagtgaa 513  Q
    |  ||| |||||||||||    
T  13308835 gtttttcctagtagtgaa 13308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 411 - 511
Target Start/End: Complemental strand, 27253955 - 27253855
Alignment:
Q  411 tctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagt 510  Q
    |||||||||||||||||| ||||| |||||||| |||||||||| ||||| ||||||||||||| |||||| |||| |||||||| | ||||||||||||    
T  27253955 tctctaattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagtagt 27253856  T
Q  511 g 511  Q
    |    
T  27253855 g 27253855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 12370080 - 12369951
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcatttttt-cc 470  Q
    ||||||| |||||||| || ||||||||| | |||||| |||||||||||||||||| ||||| ||||||           | |||||||||||||| ||    
T  12370080 ttagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgacca-----------aagaatttcatttttttcc 12369992  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  12369991 gtcactaatttccctcgctaattttgctttttctagtagtg 12369951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 396 - 513
Target Start/End: Complemental strand, 12806952 - 12806834
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgag-gaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||| || ||   ||||||| |||||||||||||||| ||||| |    
T  12806952 aaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttccctccctaatat 12806853  T
Q  495 tgccttttctagtagtgaa 513  Q
    ||| ||| ||| |||||||    
T  12806852 tgcttttcctaatagtgaa 12806834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 404 - 478
Target Start/End: Original strand, 41359020 - 41359094
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaa 478  Q
    ||||||||||||||||||||||||| ||||| ||||||   ||||||||||||||||||||||||||||||||||    
T  41359020 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 41359094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 20580929 - 20581049
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttccgtcactaatttccctcgcta 490  Q
    |||||||||||||||||||||||||||| ||| | || ||||| |||| | | |||||||||| ||||| | |||||||| ||||||||||||||| |||    
T  20580929 agggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttttttccatcactaatttccctctcta 20581028  T
Q  491 attttgccttttctagtagtg 511  Q
    ||||| | |||| ||||||||    
T  20581029 attttactttttttagtagtg 20581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 374 - 481
Target Start/End: Complemental strand, 12174903 - 12174796
Alignment:
Q  374 agtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtc 473  Q
    ||||| ||| |||| || ||||||||| |||||||| |||||||||||||||||| ||||| |||| | | |||||||||||||||| |||||||| ||     
T  12174903 agtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttctgtt 12174804  T
Q  474 actaattt 481  Q
    ||||||||    
T  12174803 actaattt 12174796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 392 - 506
Target Start/End: Original strand, 26825260 - 26825374
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| ||   ||||||||||| |  | |||||||||||||||||||| | ||  |||    
T  26825260 agggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcactaattttcttccataa 26825359  T
Q  492 ttttgccttttctag 506  Q
     ||||| ||||||||    
T  26825360 ctttgctttttctag 26825374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 511
Target Start/End: Original strand, 13195586 - 13195722
Alignment:
Q  375 gtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtca 474  Q
    |||| |||||||| |  |||||||| |  ||||||||||||||||| ||||||| ||||| || ||  | |||| ||||||||||| |  |||||| |||    
T  13195586 gtgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaacttttccatca 13195685  T
Q  475 ctaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||| |||||||||| |||||||||||||    
T  13195686 ctaatctccctccctaattttgcattttctagtagtg 13195722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 392 - 479
Target Start/End: Complemental strand, 13523080 - 13522993
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||   |||||||||| ||||  ||||||||| | ||||||    
T  13523080 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatattttttccataactaat 13522993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 17734093 - 17733954
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacatttta-cgaccatgaaatttgtgaggaatttcattttttcc 470  Q
    ||||||| |||||||| || ||||||||| ||||||| ||| |||||||| ||| || |||||  |||||| ||||||||||||  |||| || ||||||    
T  17734093 ttagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatcttttcc 17733994  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagt 510  Q
    |||||||| ||  ||| |||||||||| ||| ||||||||    
T  17733993 gtcactaaattttctccctaattttgcttttcctagtagt 17733954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 41063197 - 41063336
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||| ||||| | ||||| ||||||||||||||||||| ||||| ||| ||   ||| ||||||| |||| ||||||||||    
T  41063197 ttagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccg 41063296  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||| |||   ||||||| | |||||||||||||    
T  41063297 tcactaattttccttcttaattttactttttctagtagtg 41063336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 497
Target Start/End: Complemental strand, 30928494 - 30928392
Alignment:
Q  395 gaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    |||||| ||||||  |||||||||||  |||||| ||||| |||||| | ||||||| ||  |||| ||||||||||||||||||||||||| |||||||    
T  30928494 gaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccgtcactaatttccctctctaattt 30928395  T
Q  495 tgc 497  Q
    |||    
T  30928394 tgc 30928392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 11917806 - 11917908
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||||||||| ||||| |||||||||||||||| ||||| ||||||   ||||||||||  ||||  |||||| ||||||| ||||||||| ||||    
T  11917806 agggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgtttttt-cgtcactgatttccctctctaa 11917904  T
Q  492 tttt 495  Q
    ||||    
T  11917905 tttt 11917908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 18788029 - 18787913
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||| |||  |||||||||  ||||||| ||||| ||||||  ||||||  |||| |||| |||||||| ||||||||||||| || ||||    
T  18788029 agggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaatttaggagggattttattttttc-gtcactaatttccatccctaa 18787933  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||||| |||||||    
T  18787932 ttttgctttttcaagtagtg 18787913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 481
Target Start/End: Complemental strand, 9882144 - 9882070
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||| |||||||||||||||||||| ||||| |||    ||||||||||||| |||| ||||||||||||||||||||    
T  9882144 aaattcctctctaattccgtcactaaattttgcgaa---gaaatttgtgagggattttattttttccgtcactaattt 9882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 29093693 - 29093554
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  | |||||| || |||| ||||||||||||| ||| || ||||| |||  | | || ||||||||||||| |||||||| |    
T  29093693 ttagtgagggaaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttattttttcgg 29093594  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||  || ||||||||  ||||||| | |||||||||||||    
T  29093593 tccttagtttccctccttaattttactttttctagtagtg 29093554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 512
Target Start/End: Original strand, 39748955 - 39749073
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 493  Q
    ||||||| ||||||||| ||| |||| |||||||| ||||| ||| ||   || ||| |||  ||||  |||||||||||||||||||| |||  |||||    
T  39748955 ggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaatttcgctccttaatt 39749054  T
Q  494 ttgccttttctagtagtga 512  Q
    |||| ||| ||||||||||    
T  39749055 ttgcttttcctagtagtga 39749073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 513
Target Start/End: Complemental strand, 45919011 - 45918902
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcatt-ttttccgtcactaatttccctcgctaattttgcctttt 502  Q
    ||||||||||||||||| || |||| ||||| | |||| | ||||| ||||| |||||||| ||||||||||| | ||| |||| |||||||||| |||     
T  45919011 aaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggatttcatttttttccgtcacaagttttcctc-ctaattttgcatttc 45918913  T
Q  503 ctagtagtgaa 513  Q
    |||| ||||||    
T  45918912 ctagcagtgaa 45918902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 512
Target Start/End: Original strand, 6775919 - 6776025
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttc 503  Q
    |||| |||||||||||||||  |||  |||| | ||||   ||||||||||| |||| ||||||||| ||||| ||||||||| ||||||||| |||||     
T  6775919 aaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattttttccatcact-atttccctctctaattttg-ctttta 6776016  T
Q  504 tagtagtga 512  Q
    |||||||||    
T  6776017 tagtagtga 6776025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 486
Target Start/End: Original strand, 30673504 - 30673608
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||| |||||||||||||||||||  | |||| |||||| || ||  |||||||||| | |||| ||||  ||| ||||||||||    
T  30673504 aaatttagtgagggaaaacatgaaatccctctctaattctattactaaattttatgagcaaaaaatttgtgaaggattttatttcctccttcactaattt 30673603  T
Q  482 ccctc 486  Q
     ||||    
T  30673604 tcctc 30673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 427
Target Start/End: Complemental strand, 14486751 - 14486716
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcact 427  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14486751 agggaaaacgtgaaatctctctctaattccgtcact 14486716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 507
Target Start/End: Complemental strand, 16258601 - 16258490
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 495  Q
    ||||||||||| |||||| |||||||||||||| ||||| | |||| | ||| ||||||  |||| ||| |||||| |||||| || | ||  |||||||    
T  16258601 aaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattctttccgccactaaattacatccttaatttt 16258502  T
Q  496 gccttttctagt 507  Q
    || ||| |||||    
T  16258501 gcttttcctagt 16258490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 497
Target Start/End: Original strand, 49881064 - 49881168
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||| ||| ||||||||||||||||| | || |||| |||||  ||||| | ||||| |||   |||| ||||||||||||||||| || |||| ||||    
T  49881064 agggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaactttcctc-ctaa 49881162  T
Q  492 ttttgc 497  Q
    ||||||    
T  49881163 ttttgc 49881168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 79)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 9892963 - 9893103
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  9892963 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 9893062  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  9893063 tcactaatttccctcgctaattttgctttttctagtagtga 9893103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 20182145 - 20182285
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  20182145 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccg 20182244  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  20182245 tcactaatttccctcgctaattttactttttctagtagtga 20182285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 508
Target Start/End: Original strand, 21140939 - 21141075
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  21140939 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccg 21141038  T
Q  472 tcactaatttccctcgctaattttgccttttctagta 508  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  21141039 tcactaatttccctcgttaattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 22153846 - 22153706
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  22153846 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccg 22153747  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  22153746 tcactaatttccctcgctaattttactttttctagtagtga 22153706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 22579488 - 22579349
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||    
T  22579488 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccg 22579389  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  22579388 tcactaatttccctcgctaattttgctttttctaatagtg 22579349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 6598464 - 6598605
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  6598464 ttagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccg 6598563  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  6598564 tcactaatttccctcgctaattttgctttttctagtagtgaa 6598605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 16250941 - 16250801
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  |||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  16250941 ttagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccg 16250842  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  16250841 tcactaatttccctcgttaattttgctttttctagtagtga 16250801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 28364911 - 28365050
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  28364911 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 28365010  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  28365011 tcactaatttccctcgctaattttgctttttctagtagtg 28365050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 372 - 513
Target Start/End: Complemental strand, 495766 - 495625
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||| ||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  495766 ttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 495667  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  495666 tcactaatttcccttgctaattttgctttttctagtagtgaa 495625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 508
Target Start/End: Original strand, 25398002 - 25398138
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  25398002 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 25398101  T
Q  472 tcactaatttccctcgctaattttgccttttctagta 508  Q
    |||||||||||||||||||||||| | ||||||||||    
T  25398102 tcactaatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 26224448 - 26224568
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||||||||||| |||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26224448 agggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 26224547  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  26224548 ttttgctttttctagtagtga 26224568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 15364597 - 15364458
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||||| |||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  15364597 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 15364498  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  15364497 tcactaatttccctcactaattttgctttttctagtagtg 15364458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 6605615 - 6605495
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6605615 agggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 6605516  T
Q  492 ttttgccttttctagtagtga 512  Q
    |||||| ||||||||||||||    
T  6605515 ttttgctttttctagtagtga 6605495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 400 - 511
Target Start/End: Original strand, 15509184 - 15509295
Alignment:
Q  400 cgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgcct 499  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  15509184 cgtgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctt 15509283  T
Q  500 tttctagtagtg 511  Q
    ||||| ||||||    
T  15509284 tttctggtagtg 15509295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 18492369 - 18492508
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||    
T  18492369 ttagtgagagaaattttgtaagggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattttttccg 18492468  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||| | ||||||||||||| |||||||| ||||    
T  18492469 tcactaatttgcatcgctaattttgctttttctagcagtg 18492508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 24661148 - 24661009
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||| |||||||||||||||| || ||||| |||||| | |||||||||||||||||||||||||||    
T  24661148 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 24661049  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  24661048 tcactaatttccctcgctaattttgctttttctagtagtg 24661009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 30834099 - 30833960
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||||||||||| || ||||| ||||| ||||||||||||||||| |||| || ||||| ||||||  ||||| ||||||||||||||||||||||    
T  30834099 ttagtgaaggaaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccg 30834000  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  30833999 tcactaatttccctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 12200694 - 12200833
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||  |||||||||||||||||||| |||||| |||||||||||| | |||||||||||||||||||||||||||    
T  12200694 ttagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 12200793  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||| |||||||||| |||||||| ||||    
T  12200794 tcactaatttccctcactaattttgctttttctagcagtg 12200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 21990313 - 21990175
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||||| |||||||||||||||||||||||||  |||| |||||| ||||||||||||||||||||| |||||||    
T  21990313 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcat-ttttccg 21990215  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||| |||||||||||||||||||||| |||||||||||||    
T  21990214 tcattaatttccctcgctaattttgctttttctagtagtg 21990175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 392 - 510
Target Start/End: Original strand, 5360429 - 5360547
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5360429 agggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgctaa 5360528  T
Q  492 ttttgccttttctagtagt 510  Q
    |||||| ||||||||||||    
T  5360529 ttttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 382 - 511
Target Start/End: Original strand, 15448395 - 15448524
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||||||||||||||||||||| || ||||| |||  | | |||||||||||||||||||||||||||||||||||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattt 15448494  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| |||||||||||||    
T  15448495 ccctcgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 27705422 - 27705531
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  27705422 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 27705521  T
Q  472 tcactaattt 481  Q
    | ||||||||    
T  27705522 taactaattt 27705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 1939358 - 1939242
Alignment:
Q  395 gaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    |||||| |||||||||||||||||||||||| || ||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1939358 gaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattttttcggtcactaatttccctcgctaattt 1939259  T
Q  495 tgccttttctagtagtg 511  Q
    ||| |||||||||||||    
T  1939258 tgctttttctagtagtg 1939242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 2992615 - 2992755
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| |||||||||     
T  2992615 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttcca 2992714  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||| ||| ||| ||||||||||    
T  2992715 tcactaatttccctcgctaattatgcttttcctagtagtga 2992755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 2669309 - 2669448
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| ||  || ||||||| |||| |||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||| ||    
T  2669309 ttagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcg 2669408  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  2669409 tcactaatttccctcgttaattttgctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 11049870 - 11049751
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  11049870 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcccttgctaa 11049771  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||  |||||||||||||    
T  11049770 ttttgttttttctagtagtg 11049751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 23281794 - 23281908
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||| ||||||||    
T  23281794 ggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccatcactaat 23281893  T
Q  480 ttccctcgctaatttt 495  Q
    ||||||| ||||||||    
T  23281894 ttccctc-ctaatttt 23281908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 33250827 - 33250708
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||| ||||||||||||| |||||| ||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| |||    
T  33250827 agggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgttaa 33250728  T
Q  492 ttttgccttttctagtagtg 511  Q
    ||||| ||||||||||||||    
T  33250727 ttttgtcttttctagtagtg 33250708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 392 - 505
Target Start/End: Complemental strand, 5192308 - 5192195
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||| |||||||||| |||||||||    
T  5192308 agggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcctcgctaa 5192209  T
Q  492 ttttgccttttcta 505  Q
    |||||| |||||||    
T  5192208 ttttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 15961526 - 15961407
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||| ||||||||||||||| |||| ||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  15961526 agggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccctcgttaa 15961427  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  15961426 ttttgctttttctagtagtg 15961407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 22083838 - 22083977
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||| | ||||| |||||| | |||||||||||||||| || |||||||    
T  22083838 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 22083937  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||||| ||| |||||||||    
T  22083938 tcacaaatttccctccctaattttgcttttcctagtagtg 22083977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 26939607 - 26939726
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||  ||||||||||||||||  |||    
T  26939607 agggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcactaatttccctcagtaa 26939706  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||||||||||||    
T  26939707 ttttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 12499236 - 12499357
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||||||||| |||||||||| ||||| ||||||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  12499236 agggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccctcgctaa 12499335  T
Q  492 ttttg-ccttttctagtagtga 512  Q
    |||||   ||||||||||||||    
T  12499336 ttttgtttttttctagtagtga 12499357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 392 - 512
Target Start/End: Original strand, 12506565 - 12506686
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||||||||| |||||||||| ||||| ||||||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  12506565 agggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccctcgctaa 12506664  T
Q  492 ttttg-ccttttctagtagtga 512  Q
    |||||   ||||||||||||||    
T  12506665 ttttgtttttttctagtagtga 12506686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 392 - 512
Target Start/End: Complemental strand, 12509665 - 12509544
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||||||||| |||||||||| ||||| ||||||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  12509665 agggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccctcgctaa 12509566  T
Q  492 ttttg-ccttttctagtagtga 512  Q
    |||||   ||||||||||||||    
T  12509565 ttttgtttttttctagtagtga 12509544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 6978300 - 6978416
Alignment:
Q  395 gaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattt 494  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtaactaatttccctcgctaattt 6978399  T
Q  495 tgccttttctagtagtg 511  Q
    ||| ||| ||| |||||    
T  6978400 tgcttttcctaatagtg 6978416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 12951708 - 12951847
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| |||||||||||||||||||||||| || ||||| |||||| | |||||||||| ||||| || |||||||    
T  12951708 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttccg 12951807  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||||| ||| |||||||||    
T  12951808 tcacaaatttccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 27796973 - 27796835
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| | | || | ||||| |||| ||| ||||||||| ||    
T  27796973 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcatttttttcg 27796874  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagt 510  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  27796873 tcactaatttccctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 18033664 - 18033525
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||  | ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||| | | ||||||    
T  18033664 ttagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattt-aatgtttccg 18033566  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||| |||||||||| |||||||||| ||| ||||||||||    
T  18033565 tcacaaatttccctccctaattttgcttttcctagtagtga 18033525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 12160965 - 12160847
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| | |||||||||||||||| |||||||| ||||| ||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12160965 agggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattttttacgtcactaatttccctcgctaa 12160867  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||||||||||||    
T  12160866 ttttactttttctagtagtg 12160847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 372 - 514
Target Start/End: Original strand, 14886561 - 14886703
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| | ||||||||||||||||||||||||| ||||||||||||   ||| ||||||| |||| |||||||| |    
T  14886561 ttagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctg 14886660  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaac 514  Q
    |||||||||| |||| |||||||||| |||||| |||||||||    
T  14886661 tcactaattttcctccctaattttgctttttctggtagtgaac 14886703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 372 - 513
Target Start/End: Complemental strand, 12351725 - 12351584
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| |  ||||||||||||||||  |||||||||||||||| || ||||| |||| | | |||||||||||||||| ||||||||||    
T  12351725 ttagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccg 12351626  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||  ||||| | | |||||||||||||||    
T  12351625 tcactaatttccctccttaattatactttttctagtagtgaa 12351584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 11077669 - 11077785
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||| |||||| | |||||||||||||||| || ||||||||||| |||||||||| ||||    
T  11077669 agggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaa 11077768  T
Q  492 ttttgccttttctagta 508  Q
    |||| | ||||||||||    
T  11077769 tttttctttttctagta 11077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 392 - 493
Target Start/End: Original strand, 12845023 - 12845124
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||||   |||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  12845023 agggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttattttttccgtcactaatttccctccctaa 12845122  T
Q  492 tt 493  Q
    ||    
T  12845123 tt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 9885243 - 9885383
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| |||||||||||| |||||  ||||||| ||||| | ||||  |||||||||||  |||| ||||||||||    
T  9885243 ttagtgacgaaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccg 9885342  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    ||||||||||||||| || ||||||| ||||||||||||||    
T  9885343 tcactaatttccctccctgattttgctttttctagtagtga 9885383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 404 - 512
Target Start/End: Original strand, 17919568 - 17919676
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttc 503  Q
    ||||||||||||||||||||||||| ||||| |||||| | ||||| ||| |||||||||||||||||||| | ||||| |||||||||||||  |||||    
T  17919568 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattttttccgtcattgatttctctcgctaattttgttttttc 17919667  T
Q  504 tagtagtga 512  Q
    |||||||||    
T  17919668 tagtagtga 17919676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 11530225 - 11530364
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||| |||||||| |||||||||||||||||| |||||||||  | ||||||| |||| ||||| || |||||||    
T  11530225 ttagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccg 11530324  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||||| ||| ||| |||||    
T  11530325 tcacaaatttccctccctaattttgcttttcctaatagtg 11530364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 404 - 511
Target Start/End: Original strand, 28668132 - 28668239
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttc 503  Q
    |||||||| ||||||||||||| || ||||| ||| || | |||||||||||||||| ||||||||||||||| |||||||||||||||||| | |||||    
T  28668132 aaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccctcgctaattttactttttc 28668231  T
Q  504 tagtagtg 511  Q
    ||||||||    
T  28668232 tagtagtg 28668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 14036620 - 14036751
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| || ||||| ||| |||| |||||||||||||        |||| |    
T  14036620 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgaggaa--------tttctg 14036711  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||| | |||| ||||||||    
T  14036712 tcactaatttccctcgctaattttcctttttttagtagtg 14036751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 343702 - 343593
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||  | ||||||||||| ||||||||||||||||| ||||||| | ||| ||||||  ||||||||||||||||||||||||| ||    
T  343702 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcattttttacg 343603  T
Q  472 tcactaattt 481  Q
    ||||||||||    
T  343602 tcactaattt 343593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 402 - 511
Target Start/End: Original strand, 14772691 - 14772800
Alignment:
Q  402 tgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttt 501  Q
    ||||||| ||||||||||||||||||| |||||||||||| | |||||||||||||||| || |||| |||||| |||||| ||| |||||||||| |||    
T  14772691 tgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgctttt 14772790  T
Q  502 tctagtagtg 511  Q
    |||| |||||    
T  14772791 tctaatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 14872139 - 14872255
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| ||||||||||||||||||||||||||| |||||   |||| | |||||||||||||||| || ||||||||||| |||||||||| ||||    
T  14872139 agggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctctctaa 14872238  T
Q  492 ttttgccttttctagta 508  Q
    |||| | ||| ||||||    
T  14872239 tttttcttttcctagta 14872255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 18048788 - 18048928
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||| ||||| ||||||||||| |||||||  |||||| ||||| ||||||   |||||||||| ||||| ||||||||||    
T  18048788 ttagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttattttttccg 18048887  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||| |||| |||||||||  ||| ||||||||||    
T  18048888 tcactaattttcctctctaattttgtttttcctagtagtga 18048928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 430 - 511
Target Start/End: Original strand, 5250197 - 5250278
Alignment:
Q  430 attttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  5250197 attttgcgaccaagaaatttatgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtg 5250278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 372 - 504
Target Start/End: Original strand, 9060091 - 9060222
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    |||||||||||||||| |  ||||||| | ||||||  ||||||||||| ||||||| ||||| ||||||  |||||||||||| |||| ||||||||||    
T  9060091 ttagtgaaggaaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccg 9060189  T
Q  472 tcactaatttccctcgctaattttgccttttct 504  Q
    ||||||||||| |||  ||||||||| ||||||    
T  9060190 tcactaatttcgctctttaattttgctttttct 9060222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 410 - 510
Target Start/End: Original strand, 10458802 - 10458902
Alignment:
Q  410 ctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtag 509  Q
    |||| ||||||| |||||| ||||| | |||| | ||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  10458802 ctctttaattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccctcactaattttactttttctagtag 10458901  T
Q  510 t 510  Q
    |    
T  10458902 t 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 392 - 470
Target Start/End: Original strand, 13145022 - 13145100
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttcc 470  Q
    ||||||||||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||    
T  13145022 agggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcc 13145100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 396 - 513
Target Start/End: Complemental strand, 21691611 - 21691493
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaa-tttccctcgctaattt 494  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||   |||||||||| ||||| ||||||| | ||||||| |||||||| |||||||    
T  21691611 aaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttttttcatcactaattttccctctctaattt 21691512  T
Q  495 tgccttttctagtagtgaa 513  Q
    | | |||| ||||||||||    
T  21691511 tactttttttagtagtgaa 21691493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 392 - 505
Target Start/End: Complemental strand, 20692930 - 20692817
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||||||||||| |||||||| ||||| ||||||  ||| || | | |||||| |||||||||||||||||||| ||||| |||    
T  20692930 agggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaattttcctcgttaa 20692831  T
Q  492 ttttgccttttcta 505  Q
    |||||  |||||||    
T  20692830 ttttgttttttcta 20692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 392 - 483
Target Start/End: Complemental strand, 12680303 - 12680212
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttcc 483  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||| ||   |||| ||||| ||||| ||||||||||||||||||||||    
T  12680303 agggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccgtcactaatttcc 12680212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 507
Target Start/End: Complemental strand, 12157485 - 12157380
Alignment:
Q  402 tgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttt 501  Q
    |||||||  |||||||||||||||||| |||||| |||||   | ||||| ||| |||| |||||||||||||||||||||||||  ||||||||| |||    
T  12157485 tgaaatcattctctaattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgtcactaatttccctccttaattttgctttt 12157386  T
Q  502 tctagt 507  Q
    ||||||    
T  12157385 tctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 392 - 505
Target Start/End: Complemental strand, 12205304 - 12205191
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||      |||||||||| ||||| || |||||||||||||||||| ||  ||||    
T  12205304 agggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttcctaa 12205205  T
Q  492 ttttgccttttcta 505  Q
    |||| | |||||||    
T  12205204 ttttactttttcta 12205191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 392 - 465
Target Start/End: Complemental strand, 19175896 - 19175823
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattt 465  Q
    |||||||| || |||| |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  19175896 agggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattt 19175823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 372 - 496
Target Start/End: Complemental strand, 22055751 - 22055627
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||| ||| || ||| ||||| |||||||||||||||||||| ||| |  |||||  |||||   |||||||||||||||| |||||||| |    
T  22055751 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctg 22055652  T
Q  472 tcactaatttccctcgctaattttg 496  Q
    ||| ||||||||||| |||||||||    
T  22055651 tcattaatttccctctctaattttg 22055627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 507
Target Start/End: Original strand, 1954903 - 1955015
Alignment:
Q  394 ggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 493  Q
    ||||||| |||||||| ||| ||||||| |||| | |||||  ||||| ||||||||||| |||||| ||||||||||||||| ||||||||  ||||||    
T  1954903 ggaaaacatgaaatcc-tctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtcactcatttcccttcctaatt 1955001  T
Q  494 ttgccttttctagt 507  Q
    |||| ||| |||||    
T  1955002 ttgcttttcctagt 1955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 3673233 - 3673177
Alignment:
Q  411 tctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttt 467  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  3673233 tctctaattccgtcactaaattttacgaccaaaaaatttgtgaggaatttcattttt 3673177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 5270412 - 5270502
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacga-ccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||||| ||||||| |||||||||||||||||||| ||||||||| | |  ||||||||||| ||||| ||||||||| |||| |||||    
T  5270412 agggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattttttccatcacaaattt 5270502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 33547566 - 33547655
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||||||| |||||||||| |||||||  ||||||| ||||| ||||||   ||||||||||| |||| |||||||||||| |||||||    
T  33547566 agggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccgtccctaattt 33547655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 451 - 513
Target Start/End: Complemental strand, 13251439 - 13251377
Alignment:
Q  451 tgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||| ||||| ||||||||||||| ||| |||||||||| ||||||| |||||||    
T  13251439 tgaggaatttcacttttttcgtcactaatttctctctctaattttgctttttctattagtgaa 13251377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 496
Target Start/End: Complemental strand, 10929616 - 10929511
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgagga-atttcattttttccgtcactaatttccctcgcta 490  Q
    ||||||||| ||||||| |||| | ||||||||| || ||||| |||| | | |||||||||||  |||| |||||||||||||||||||| | || |||    
T  10929616 agggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttcccta 10929517  T
Q  491 attttg 496  Q
    ||||||    
T  10929516 attttg 10929511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 6065457 - 6065576
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||||  ||||| |||||||||||  |||| || ||||| ||| ||   ||||||||||  |||| ||||||||||||| |||||| |||| ||||    
T  6065457 agggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcctccctaa 6065556  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| ||| ||| |||||    
T  6065557 ttttgcttttcctaatagtg 6065576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 16118166 - 16118285
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||| ||| ||||||| |||||||||| ||||| || ||||| ||| |  | ||||||| ||  |||| | |||||||||||||||||||| || ||||    
T  16118166 agggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtttttccgtcactaatttccgtccctaa 16118265  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| ||||| ||| |||||    
T  16118266 ttttacctttcctaatagtg 16118285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 511
Target Start/End: Complemental strand, 8844222 - 8844168
Alignment:
Q  457 atttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| ||||||||||||||||||||||||| || ||||| | |||||||||||||    
T  8844222 attttattttttccgtcactaatttccctccctgatttttctttttctagtagtg 8844168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 375 - 451
Target Start/End: Complemental strand, 13668130 - 13668054
Alignment:
Q  375 gtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgt 451  Q
    ||||||||||||| |  |||||||||||||||| || |||||||||| ||| || |||||||||  | |||||||||    
T  13668130 gtgaaggaaatttagagagggaaaacgtgaaattcccctctaattccatcattaaattttacgataaagaaatttgt 13668054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 511
Target Start/End: Original strand, 33191180 - 33191219
Alignment:
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  33191180 tcactaatttccctcgctaattttgctttttctaatagtg 33191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 2396227 - 2396313
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaa-tttcattttttccgtcactaattt 481  Q
    ||||||||||||  ||||||  |||||||| || ||||||| ||||   ||||| ||||||| ||| ||||||||||||||||||||    
T  2396227 aaaacgtgaaatttctctctgtttccgtcattaaattttacaaccaaagaatttatgaggaatttttattttttccgtcactaattt 2396313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 7000998 - 7000896
Alignment:
Q  396 aaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcatt-ttttccgtcactaatttccctcgctaattt 494  Q
    ||||| |||||| ||||  ||||| | |||||| ||| |  ||| ||||||||||||||| |||||||| |||||  ||||| ||||||||| |||||||    
T  7000998 aaaacatgaaatacctcaataatttcttcactaaattctgtgactatgaaatttgtgagggatttcatttttttctatcactgatttccctcactaattt 7000899  T
Q  495 tgc 497  Q
    |||    
T  7000898 tgc 7000896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 480
Target Start/End: Complemental strand, 30745836 - 30745750
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatt 480  Q
    ||||||||||||||||  |||||||| |||||||||| ||||||||| ||  |||||||| |   |||| ||||||||  |||||||||    
T  30745836 agggaaaacgtgaaat--ctctctaagtccgtcactaaattttacgatcaaaaaatttgtaaatgattttattttttctatcactaatt 30745750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 444 - 496
Target Start/End: Original strand, 28221664 - 28221716
Alignment:
Q  444 aaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttg 496  Q
    |||||| |||| ||||| ||||||||| ||||||||||||||| || ||||||    
T  28221664 aaatttatgagaaattttattttttccctcactaatttccctccctgattttg 28221716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 108; Significance: 7e-54; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 84303 - 84442
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||    
T  84303 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccg 84402  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  84403 tcactaatttcccttgctaattttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 8249 - 8110
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | ||||||| |||||||||||||||||||    
T  8249 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccg 8150  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||| |||||||||||||||||||||| |||||||| ||||    
T  8149 tcattaatttccctcgctaattttgctttttctagaagtg 8110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 21981 - 21842
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | ||||||| |||||||||||||||||||    
T  21981 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccg 21882  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||| |||||||||||||||||||||| |||||||| ||||    
T  21881 tcattaatttccctcgctaattttgctttttctagaagtg 21842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 39842 - 39703
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||||||     
T  39842 ttagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattttttcca 39743  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  39742 tcactaatttccctcgctaattttgctttttctagtagtg 39703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 372 - 510
Target Start/End: Original strand, 7505 - 7643
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||| |||||||    
T  7505 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccg 7604  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagt 510  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  7605 tcactaatttccctcgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 372 - 512
Target Start/End: Complemental strand, 37926 - 37786
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||    
T  37926 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccg 37827  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||  ||||||||||  ||||||||||||||    
T  37826 tcactaatttcccctgctaattttgttttttctagtagtga 37786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 6118 - 5979
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  6118 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 6019  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  6018 tcactaatttccctcgctaattttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 9368 - 9229
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||||| |||||| |||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  9368 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 9269  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  9268 tcactaatttccctcactaattttgctttttctagtagtg 9229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 19603 - 19742
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  19603 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19702  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  19703 tcactaatttcccttgctaattttgctttttctagtagtg 19742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 12653 - 12791
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| |||||||  ||||| |||||||||||||||||||||    
T  12653 ttagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattttttccg 12751  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  12752 tcactaatttccctcgctaattttgctttttcaagtagtg 12791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 96; Significance: 1e-46; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 380 - 511
Target Start/End: Original strand, 3750 - 3881
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  3750 ggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaat 3849  T
Q  480 ttccctcgctaattttgccttttctagtagtg 511  Q
    || ||||||||||||||| |||||||||||||    
T  3850 tttcctcgctaattttgctttttctagtagtg 3881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 202774 - 202914
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||||| |||| |||||||||||||||||||| ||||| |||||| | |||||||||| ||||||||||||||||    
T  202774 ttagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccg 202873  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  202874 tcactaatttccctcgctaatttttctttttctagtagtga 202914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 440 - 511
Target Start/End: Complemental strand, 274736 - 274665
Alignment:
Q  440 catgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  274736 catggaatttgtgaagaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 274665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 276273 - 276211
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacatttt 434  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  276273 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaatttt 276211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 15119 - 14990
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||| |||||||||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaattt 15020  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| |||||||||||||    
T  15019 ccctcgctaattttgctttttctagtagtg 14990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 22221 - 22352
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||| ||||| |||| | | |||||||||||||||||||||||| ||||||||||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaattt 22320  T
Q  482 ccctcgctaattttgccttttctagtagtgaa 513  Q
    |||||||||||||||| |||||||||||||||    
T  22321 ccctcgctaattttgctttttctagtagtgaa 22352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 26483 - 26622
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||| |||| || ||||||||||| ||||||||||||||||||||||||| ||||| ||||||   |||||||||||||||||||||||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 26582  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||| || |||||||||| |||||||||||||    
T  26583 tcactaatttccgtcactaattttgctttttctagtagtg 26622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 86; Significance: 9e-41; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 382 - 511
Target Start/End: Complemental strand, 10792 - 10663
Alignment:
Q  382 aaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    |||||| || ||||||||||| |||| |||||||||||||||||||| ||||| |||| | | |||||||||||||||||||||||||||||||||||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 10693  T
Q  482 ccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||| |||||||| ||||    
T  10692 ccctcgctaattttgctttttctagcagtg 10663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 86; Significance: 9e-41; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 58582 - 58723
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||| || |||||||    
T  58582 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccg 58681  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtgaa 513  Q
    |||| |||||||||| |||||||||| ||| |||||||||||    
T  58682 tcacaaatttccctccctaattttgcttttcctagtagtgaa 58723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 86; Significance: 9e-41; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 372 - 508
Target Start/End: Complemental strand, 74857 - 74720
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaa-cgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttcc 470  Q
    ||||||||||| |||| || |||||||| | ||||||||||||||||||| ||||||| ||||||||||||   |||||||||| |||||||||||||||    
T  74857 ttagtgaaggatatttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcattttttcc 74758  T
Q  471 gtcactaatttccctcgctaattttgccttttctagta 508  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  74757 gtcactaatttcccttgctaattttgccttttctagta 74720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 1058 - 918
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttca-ttttttcc 470  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| | ||||| |||||||||| | ||||||||    
T  1058 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttttttcc 959  T
Q  471 gtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  958 gtcagtaatttccctcgctaattttgctttttctagtagtg 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 74680 - 74541
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||| || |||||||    
T  74680 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccg 74581  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||| | ||| |||||||||    
T  74580 tcacaaatttccctccctaattttacttttcctagtagtg 74541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 80; Significance: 3e-37; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 219656 - 219775
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||| |||||||||||||||||||||| |||| ||||| |||  |  |||||||||||||||||||||||||||||||||||||||| |||||||    
T  219656 agggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcactaatttccgtcgctaa 219755  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||||||||||||    
T  219756 ttttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 404 - 510
Target Start/End: Original strand, 182562 - 182668
Alignment:
Q  404 aaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttc 503  Q
    ||||||||||||||||||||||||| ||||| |||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||    
T  182562 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttactttttc 182661  T
Q  504 tagtagt 510  Q
    |||||||    
T  182662 tagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 215775 - 215663
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| ||||||||||||||||||||        ||| |||||| | ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  215775 agggaaaacgtaaaatccctctctaattccgta-------tttgcgaccaaggaatttgtgaggaatttcattttttccgtcgctaatttctctcgctaa 215683  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||||| |||| ||||||||    
T  215682 ttttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 392 - 507
Target Start/End: Complemental strand, 84793 - 84678
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| |||||| | ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  84793 agggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccctcactaa 84694  T
Q  492 ttttgccttttctagt 507  Q
    |||||| |||||||||    
T  84693 ttttgctttttctagt 84678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 121106 - 120987
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||||| ||||||| | | ||||||||||||| ||||    
T  121106 agggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttcataactaatttccctctctaa 121007  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||| ||||||||    
T  121006 ttttactttttttagtagtg 120987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 392 - 511
Target Start/End: Complemental strand, 3281 - 3162
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||| || || |||||||||||||||||||||| ||||    
T  3281 agggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtcactaatttccctccctaa 3182  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | ||||||| |||||    
T  3181 tttttctttttctattagtg 3162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 392 - 511
Target Start/End: Original strand, 439983 - 440102
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaa 491  Q
    |||||||| || ||||||||||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||||||||||||||| | ||| |||||    
T  439983 agggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatattccttgctaa 440082  T
Q  492 ttttgccttttctagtagtg 511  Q
    |||| | |||||||||||||    
T  440083 ttttactttttctagtagtg 440102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 380 - 508
Target Start/End: Original strand, 6803 - 6931
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| || ||||||||| |||||| ||||||||||||||||| || ||||| | || | |||||||| || |||||||||||||||||||| ||||    
T  6803 ggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattttttccgtcaataat 6902  T
Q  480 ttccctcgctaattttgccttttctagta 508  Q
    |||||||||||||||||| ||||||||||    
T  6903 ttccctcgctaattttgctttttctagta 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 43917 - 44056
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| | |||||| || ||||||||||| |||| | ||||||||||||| | || ||||| ||||||   ||||||||||||||||||||||||||     
T  43917 ttagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttcca 44016  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  44017 tcactaatttccctcgctaatttttctttttctagtagtg 44056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 380 - 508
Target Start/End: Original strand, 7464 - 7592
Alignment:
Q  380 ggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaat 479  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||| | ||| |||| | | | ||||||| |||||||||||||||||||||||||    
T  7464 ggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccgtcactaat 7563  T
Q  480 ttccctcgctaattttgccttttctagta 508  Q
    || ||||| ||||||| | ||||||||||    
T  7564 tttcctcgttaattttactttttctagta 7592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 511
Target Start/End: Original strand, 10158 - 10297
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||  | ||||||||| ||||||||||||||||||||||||||| ||||| |||  |   |||||||||||||||| || |||||||    
T  10158 ttagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccg 10257  T
Q  472 tcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||| |||||||||| |||||||||| ||| |||| ||||    
T  10258 tcacaaatttccctccctaattttgcttttcctagcagtg 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 423 - 511
Target Start/End: Complemental strand, 17705 - 17617
Alignment:
Q  423 tcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||| | ||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 17617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 173444 - 173585
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaa--tttgtgaggaatttcattttttc 469  Q
    ||||||| ||| |||| || ||||||||| | ||||| ||||||||||||||||||| ||||| ||||||   ||  ||| |||| ||||||||||||||    
T  173444 ttagtgatggatatttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcattttttc 173543  T
Q  470 cgtcactaatttccctcgctaattttgccttttctagtagtga 512  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||    
T  173544 cgtcactaattt-cctcgctaattttgctttttctaatagtga 173585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 9883 - 9949
Alignment:
Q  445 aatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgccttttctagtagtg 511  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||    
T  9883 aatttgtgagaaatttcattttttccttcactaatttcactcgctaattttgctttttctagtagtg 9949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 497
Target Start/End: Original strand, 10892 - 11017
Alignment:
Q  372 ttagtgaaggaaattttgtcagggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccg 471  Q
    ||||||| ||||||||  | ||| ||||| |||||| |||||||||||| ||||||| |||||  ||||| | |||||||||||||||| || |||| ||    
T  10892 ttagtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatatttttcg 10991  T
Q  472 tcactaatttccctcgctaattttgc 497  Q
    |||| ||||||| || ||||||||||    
T  10992 tcacaaatttccttccctaattttgc 11017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 481
Target Start/End: Complemental strand, 1638 - 1549
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||| ||| ||||| ||||||||||||  || |||| ||||| |||||| | ||||| ||||| |||| ||||||||||||||||||||    
T  1638 agggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaattt 1549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 481
Target Start/End: Complemental strand, 19257 - 19168
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||| ||| ||||||||||||||||||  ||  ||| ||||| |||||| |||| || ||||  |||| ||||||||||||| ||||||    
T  19257 agggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccgtcattaattt 19168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 36322 - 36411
Alignment:
Q  392 agggaaaacgtgaaatccctctctaattccgtcactacattttacgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 481  Q
    ||||| ||| ||||||| ||||||||||  || |||| |||||  ||||| | ||||| ||| | |||| ||||||||||||||||||||    
T  36322 agggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaatttatgatggattttattttttccgtcactaattt 36411  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 444 - 496
Target Start/End: Original strand, 22162 - 22214
Alignment:
Q  444 aaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttg 496  Q
    |||||| |||| ||||| ||||||||| ||||||||||||||| || ||||||    
T  22162 aaatttatgagaaattttattttttccctcactaatttccctccctgattttg 22214  T

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