View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8310_high_6 (Length: 251)
Name: NF8310_high_6
Description: NF8310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8310_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 44829427 - 44829665
Alignment:
| Q |
1 |
cctccaattggtagtgattcgttttttgatattactaacatggccttagaaatttgactttgaagattctctctattcttctgaagcttttcctgagaaa |
100 |
Q |
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| T |
44829427 |
cctccaattggtagtgattcgttttttgatattactaacatggccttagaaatttgactttgaagattctctctattcttctgaagcttttcctgagaaa |
44829526 |
T |
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| Q |
101 |
agataattaagattgactacatggcttgctcatagaaatatgcagggaaaaacaaattaaaataagaaatgaaagttctgctacnnnnnnnntcaagttg |
200 |
Q |
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| T |
44829527 |
agataattaagattgactacatggcttgctcatagaaatatgcagggaaaaacaaattaaaataagaaatgaaagttctgctac-aaaaaaatcaagttg |
44829625 |
T |
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| Q |
201 |
tgccaccaaaacaacaattacgtgaaagagaatgcttcat |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
44829626 |
tgccaccaaaacaacaattacgtgaaagagaatgcttcat |
44829665 |
T |
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