View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8310_high_9 (Length: 221)
Name: NF8310_high_9
Description: NF8310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8310_high_9 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 39890952 - 39891172
Alignment:
| Q |
1 |
atccaaatttataaaattataatctattacgatttggagaatctaaaatgcacaacggtggtagaatccatctaagtcataccattttgtttgaaaacca |
100 |
Q |
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| T |
39890952 |
atccaaattcataaaattataatctattacgatttggagaatctaaaatgcacaacggtggtagaatccatctaagtcataccattttgtttgaaaacca |
39891051 |
T |
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| Q |
101 |
atagaagcaatcttgtcggctcagtgtttgtgctctatgagaatataaagaaatgtaaaaatgcatgttttttgttaactccgtacaacccagtcattta |
200 |
Q |
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| T |
39891052 |
atagaagcaatcttgtcggctcagtgtttgtgctctatgagaatataaagaaatgtaaaaatgcatgttttttgttaactccgtacaactcagtcattta |
39891151 |
T |
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| Q |
201 |
tattcctcaaatgttagtgaa |
221 |
Q |
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| T |
39891152 |
tattcctcaaatgttagtgaa |
39891172 |
T |
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