View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8310_low_7 (Length: 255)
Name: NF8310_low_7
Description: NF8310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8310_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 45892922 - 45892694
Alignment:
| Q |
16 |
caaatatggtcgggtcatccttatatgccaatccagttatagtattatttcttgtcaaaacagcctggacacatttcatttcaatcaaatttttcaaaat |
115 |
Q |
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| T |
45892922 |
caaatatggtcgggtcatccttatatgccaatccagttatagtattatttcttgtcaaaacagcctggacacatttca-----atcaaatttttcaaaat |
45892828 |
T |
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| Q |
116 |
tcaacatattactttatgttaaagttt-gtgtctatttattttttcgtgagaatttatcaaactttgtaaatagctagtgaatatatatcatgcatgtat |
214 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45892827 |
tcaacatattactttatgttaaagttttgtgtctatttattttttcgtgagaatttatcaaactttgtaaatagctagtgaatatatatcatgcatgtat |
45892728 |
T |
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| Q |
215 |
ctctttttctttatggtttagccttaattttgtt |
248 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
45892727 |
ctctttttctttatggtttagccttaattttgtt |
45892694 |
T |
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