View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8311_low_10 (Length: 305)

Name: NF8311_low_10
Description: NF8311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8311_low_10
NF8311_low_10
[»] chr2 (4 HSPs)
chr2 (138-299)||(5051479-5051635)
chr2 (1-72)||(5051342-5051413)
chr2 (4-72)||(36592861-36592929)
chr2 (138-238)||(36592995-36593095)
[»] chr7 (11 HSPs)
chr7 (138-299)||(15121311-15121472)
chr7 (138-241)||(5892811-5892912)
chr7 (138-241)||(36934323-36934426)
chr7 (140-278)||(47589127-47589265)
chr7 (4-72)||(5892978-5893046)
chr7 (143-241)||(26199880-26199981)
chr7 (5-72)||(36934201-36934268)
chr7 (4-60)||(40074342-40074398)
chr7 (4-72)||(26199741-26199809)
chr7 (4-72)||(47588991-47589059)
chr7 (16-72)||(15121538-15121593)
[»] chr5 (6 HSPs)
chr5 (138-299)||(9436510-9436671)
chr5 (149-241)||(27632083-27632175)
chr5 (138-238)||(36607762-36607862)
chr5 (140-243)||(33758261-33758364)
chr5 (4-72)||(33758127-33758193)
chr5 (4-72)||(9436376-9436444)
[»] chr4 (15 HSPs)
chr4 (142-287)||(50589677-50589822)
chr4 (138-278)||(14792327-14792467)
chr4 (138-241)||(12888336-12888439)
chr4 (152-243)||(51407192-51407283)
chr4 (4-72)||(12888202-12888270)
chr4 (4-72)||(14792193-14792261)
chr4 (6-68)||(3926263-3926325)
chr4 (4-72)||(51407363-51407429)
chr4 (138-226)||(18357186-18357273)
chr4 (138-226)||(18431534-18431621)
chr4 (16-72)||(18357064-18357120)
chr4 (16-72)||(18431687-18431743)
chr4 (4-63)||(23533314-23533373)
chr4 (6-64)||(3915276-3915334)
chr4 (4-72)||(50589538-50589606)
[»] scaffold0005 (2 HSPs)
scaffold0005 (138-278)||(47264-47404)
scaffold0005 (4-72)||(47470-47538)
[»] chr6 (5 HSPs)
chr6 (138-241)||(22696637-22696740)
chr6 (149-241)||(34502876-34502968)
chr6 (4-72)||(22696503-22696571)
chr6 (5-72)||(34503045-34503112)
chr6 (4-44)||(24045609-24045649)
[»] chr3 (7 HSPs)
chr3 (138-287)||(51056647-51056796)
chr3 (138-239)||(25498932-25499033)
chr3 (4-68)||(38258783-38258847)
chr3 (4-72)||(51056861-51056929)
chr3 (4-72)||(25498797-25498865)
chr3 (160-193)||(49358685-49358718)
chr3 (4-72)||(49358536-49358604)
[»] chr8 (4 HSPs)
chr8 (138-241)||(20519108-20519211)
chr8 (138-238)||(38149387-38149487)
chr8 (6-72)||(20518976-20519042)
chr8 (138-188)||(32919437-32919487)
[»] chr1 (6 HSPs)
chr1 (138-241)||(32946800-32946903)
chr1 (164-278)||(36057677-36057791)
chr1 (164-278)||(36058805-36058919)
chr1 (4-72)||(27109807-27109875)
chr1 (14-72)||(32946969-32947027)
chr1 (190-287)||(27109901-27109998)


Alignment Details
Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 138 - 299
Target Start/End: Original strand, 5051479 - 5051635
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  5051479 cctccacatagatctggattggaaggaaacaaccaccacacaaaaacaccagacaatttgtatttttctaagagccgcaaactcagcacacgcaaggaag 5051578  T
Q  238 aaaacaacatcgtcgcaactattataccaaaaccaccaccaacatctcctattaactccaaa 299  Q
    ||||||||     |||||||||| ||| |||||||||||||||| ||||||||| |||||||    
T  5051579 aaaacaac-----cgcaactattgtactaaaaccaccaccaacacctcctattacctccaaa 5051635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5051342 - 5051413
Alignment:
Q  1 tcaacaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5051342 tcaacaaaccaccatataacagagtagtcaaaccggatgagaaggttatgatcgaacccaaccgttgaagac 5051413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 36592861 - 36592929
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||| |||||||||    
T  36592861 acaaaccaccagataacagagtagccaaaccgggtgagaaggttatgatcgaacccaacagttgaagac 36592929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 36592995 - 36593095
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||   ||| |||||| || |  |||||||||| ||| | ||||||||    
T  36592995 cctccacatagatctggatcagaaggaaacaatcaccacacaaaaacaccagacagcatgtgtttttccaacaaccgcaaactcaacacccacaaggaag 36593094  T
Q  238 a 238  Q
    |    
T  36593095 a 36593095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 138 - 299
Target Start/End: Complemental strand, 15121472 - 15121311
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||| ||| |||||||| ||||||||||| ||||||||||||| |||||||||| || | |||||||||||| |||||||||||||| ||||||||||    
T  15121472 cctccatatagatctggatcggaaggaaacatccaccacacaaaagcaccagacaacctatgtttttctaagagccgcaaactcagcacccgcaaggaag 15121373  T
Q  238 aaaacaacatcgtcgcaactattataccaaaaccaccaccaacatctcctattaactccaaa 299  Q
    ||| ||||| || ||||||||   || ||||||||||||||||| ||||| ||| |||||||    
T  15121372 aaaccaacaccgccgcaactaccgtatcaaaaccaccaccaacacctcctcttacctccaaa 15121311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 5892912 - 5892811
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| ||||| || |||||||||  ||||||||||||||||||||||||| |||| ||||||||| || |||||||||||||  ||||||||||    
T  5892912 cctccacatagatctgaatcggaaggaaa--accaccacacaaaaacaccagacaacctgtgtttttctaatagccgcaaactcagcatccgcaaggaag 5892815  T
Q  238 aaaa 241  Q
    ||||    
T  5892814 aaaa 5892811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 36934323 - 36934426
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| ||||  || ||||||||||| |||||||||||||||||||||||| |||| ||||||||| || |||||||||||||| ||| |||| |    
T  36934323 cctccacatagatcttaatcggaaggaaacatccaccacacaaaaacaccagacaaactgtgtttttctaacagccgcaaactcagcacccgctaggacg 36934422  T
Q  238 aaaa 241  Q
    ||||    
T  36934423 aaaa 36934426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 278
Target Start/End: Original strand, 47589127 - 47589265
Alignment:
Q  140 tccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaa 239  Q
    |||||||| | ||||||  |||||||||  ||||||||||||||||||| |||| |||| ||||||||| |||||||||||||  || | | ||||||||    
T  47589127 tccacatagacctggatcagaaggaaacgtccaccacacaaaaacaccaaacaacctgtgtttttctaaaagtcgcaaactcaatacccacgaggaagaa 47589226  T
Q  240 aacaacatcgtcgcaactattataccaaaaccaccacca 278  Q
    |||| || || ||||||||   |||||||||||||||||    
T  47589227 aacagcaccgccgcaactacagtaccaaaaccaccacca 47589265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 5893046 - 5892978
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    ||||||||||||||||||||||| || ||| ||||||||||||| ||||||||||||||||||||||||    
T  5893046 acaaaccaccagataacagagtaatcgaaccggatgagaaggttctgattgaacccaaccgttgaagac 5892978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 26199880 - 26199981
Alignment:
Q  143 acatatatctggattggaaggaaacaaccaccacacaaaaacaccagaca---atctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaa 239  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||   | |||| ||||||||| || ||||||||||||||  | |||||||||    
T  26199880 acatagatctggatcggaaggaaacaaccaccacacaaaaacaccagacaaccaactgtgtttttctaacagccgcaaactcagcaccaggaaggaagaa 26199979  T
Q  240 aa 241  Q
    ||    
T  26199980 aa 26199981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 36934201 - 36934268
Alignment:
Q  5 caaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    ||||||||||||||| ||||||||| |||  |||||||||||| |||| |||||||||||||||||||    
T  36934201 caaaccaccagataatagagtagtcgaaccagatgagaaggttctgatcgaacccaaccgttgaagac 36934268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 40074398 - 40074342
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaaccca 60  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||| |||| |||||||    
T  40074398 acaaaccaccagataacatagtagtcgaaccggatgagaaggttctgatcgaaccca 40074342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 26199741 - 26199809
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    ||||||||||| |||| ||||||||| |||  |||||||||||  |||| |||||||||| ||||||||    
T  26199741 acaaaccaccaaataatagagtagtcgaacctgatgagaaggtactgatcgaacccaaccattgaagac 26199809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 47588991 - 47589059
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    ||||| || ||||||||| ||||||||||| |||||||||| || |||| |||| |||||||| |||||    
T  47588991 acaaatcatcagataacacagtagtcaaaccggatgagaagattctgatcgaactcaaccgttaaagac 47589059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 15121593 - 15121538
Alignment:
Q  16 ataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||| |||  |||||||||||| |||| ||| |||||||||||||||    
T  15121593 ataacagagtagtcgaaccagatgagaaggttctgatcgaa-ccaaccgttgaagac 15121538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 299
Target Start/End: Original strand, 9436510 - 9436671
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| |||||||| |||||||||||  |||||||||||||||| ||| ||  ||| |||||||||||| |||||||||||||| ||||||||||    
T  9436510 cctccacatagatctggatcggaaggaaacatacaccacacaaaaacactagaaaacatgtgtttttctaagagccgcaaactcagcacccgcaaggaag 9436609  T
Q  238 aaaacaacatcgtcgcaactattataccaaaaccaccaccaacatctcctattaactccaaa 299  Q
    ||| ||||| |  | |||||||| ||||||||||||| |||||| ||||| ||| |||||||    
T  9436610 aaagcaacaccaccacaactattgtaccaaaaccaccgccaacacctcctcttacctccaaa 9436671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 27632175 - 27632083
Alignment:
Q  149 atctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaaaa 241  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||  |||  |||||||| || |||||||||||||| |||||| |||||||    
T  27632175 atctggatcggaaggaaacaaccaccacacaaaaacaccaaacaacttgtgcttttctaacagccgcaaactcagcacccgcaagaaagaaaa 27632083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 36607862 - 36607762
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||| |||| ||||||||| || | |||||||   || ||||||||||    
T  36607862 cctccacataaatctggattggaaggaaacaaccaccaagcaaaaacatcagacaacctgtgtttttctaacagccacaaactccatacccgcaaggaag 36607763  T
Q  238 a 238  Q
    |    
T  36607762 a 36607762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 33758261 - 33758364
Alignment:
Q  140 tccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaa 239  Q
    |||||| | |||||||| ||||||||||| ||||||||| |||||||||||||| |||| |||||||||  | ||||||||||| || | |||| |||||    
T  33758261 tccacaaagatctggatcggaaggaaacatccaccacactaaaacaccagacaacctgtgtttttctaacggccgcaaactcagtacccacaagaaagaa 33758360  T
Q  240 aaca 243  Q
    ||||    
T  33758361 aaca 33758364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 33758127 - 33758193
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||| ||||||||||  ||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  33758127 acaaaccatcagataacag--tagtcgaactggatgagaaggttctgatcgaacccaaccgttgaagac 33758193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 9436376 - 9436444
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    ||||||||| ||||||||||||| || |||  |||||||||||| ||||||||| || |||||||||||    
T  9436376 acaaaccactagataacagagtaatcgaaccagatgagaaggttttgattgaactcagccgttgaagac 9436444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 287
Target Start/End: Original strand, 50589677 - 50589822
Alignment:
Q  142 cacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaaaa 241  Q
    |||||||||||||||   |||||||||||||||||||| |||||||| ||||  ||| | ||||||| |||||||||||||||||  ||| |||||||||    
T  50589677 cacatatatctggatcaaaaggaaacaaccaccacacataaacaccaaacaacatgtgtatttctaacagtcgcaaactcagcacctgcatggaagaaaa 50589776  T
Q  242 caacatcgtcgcaactattataccaaaaccaccaccaacatctcct 287  Q
    |||||||||||||||||   |||| |||||||||||| || |||||    
T  50589777 caacatcgtcgcaactacagtacctaaaccaccaccatcacctcct 50589822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 138 - 278
Target Start/End: Original strand, 14792327 - 14792467
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| ||||||||  |||||||||||||||||||| ||  |||||| ||| |||| ||||||||| ||||||||||||||||| ||||||||||    
T  14792327 cctccacatagatctggatcagaaggaaacaaccaccacacgaattcaccaggcaacctgtgtttttctaacagtcgcaaactcagcacccgcaaggaag 14792426  T
Q  238 aaaacaacatcgtcgcaactattataccaaaaccaccacca 278  Q
    |||||| ||||| |||  |||   |||||||||||||||||    
T  14792427 aaaacatcatcgccgcggctacagtaccaaaaccaccacca 14792467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 12888336 - 12888439
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| ||||||||  |||||||||||||||| |||||||||||||||||| |||| |||| |||| || |||||||||||||| ||||||||||    
T  12888336 cctccacatagatctggatcagaaggaaacaaccaccgcacaaaaacaccagacaacctgtgttttactaacagccgcaaactcagcacccgcaaggaag 12888435  T
Q  238 aaaa 241  Q
    ||||    
T  12888436 aaaa 12888439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 51407283 - 51407192
Alignment:
Q  152 tggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaaaaca 243  Q
    ||||| ||||||||||| ||||||||| |||||||||||||| |||| ||||||||| |  |||||||||||||| | |||| |||||||||    
T  51407283 tggatcggaaggaaacatccaccacactaaaacaccagacaacctgtgtttttctaacaaccgcaaactcagcacccacaagaaagaaaaca 51407192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 12888202 - 12888270
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||||||||||||||| ||  ||||||||||| | |||| |||||||||||||||||||    
T  12888202 acaaaccaccagataacagagtagtcgaatcggatgagaaggatctgatcgaacccaaccgttgaagac 12888270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 14792193 - 14792261
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||| ||||||||||||||||||||| ||| ||||||||  |||||||| |||||||||||||||||||    
T  14792193 acaacccaccagataacagagtagtcgaaccggatgagatagttatgatcgaacccaaccgttgaagac 14792261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 3926263 - 3926325
Alignment:
Q  6 aaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttga 68  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||||| ||||    
T  3926263 aaaccaccagataacagagtagtcgaaccggatgagaaggttctgatcgaacccaaccattga 3926325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 51407429 - 51407363
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||| ||||||||||  ||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  51407429 acaaaccatcagataacag--tagtccaactggatgagaaggttctgatcgaacccaaccgttgaagac 51407363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 18357186 - 18357273
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcac 226  Q
    ||||| |||| || ||||| ||||||||| ||||| |||||||||||||||||||| ||||||||| |||| ||  |||||||||||||    
T  18357186 cctccgcatagatttggatcggaaggaaa-aaccatcacacaaaaacaccagacaacctgtattttcctaacagctgcaaactcagcac 18357273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 18431621 - 18431534
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcac 226  Q
    ||||| |||| || ||||| ||||||||| ||||| |||||||||||||||||||| ||||||||| |||| ||  |||||||||||||    
T  18431621 cctccgcatagatttggatcggaaggaaa-aaccatcacacaaaaacaccagacaacctgtattttcctaacagctgcaaactcagcac 18431534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 18357064 - 18357120
Alignment:
Q  16 ataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||| ||| |||||||||| || |||| |||||||||||||||||||    
T  18357064 ataacagagtagtcgaaccggatgagaagattctgatcgaacccaaccgttgaagac 18357120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 18431743 - 18431687
Alignment:
Q  16 ataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||| ||| |||||||||| || |||| |||||||||||||||||||    
T  18431743 ataacagagtagtcgaaccggatgagaagattctgatcgaacccaaccgttgaagac 18431687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 23533314 - 23533373
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaacc 63  Q
    ||||||||||||||||||||||| |  ||| || ||||||||||||||| ||| ||||||    
T  23533314 acaaaccaccagataacagagtacttgaaccgggtgagaaggttatgatcgaatccaacc 23533373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 3915276 - 3915334
Alignment:
Q  6 aaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccg 64  Q
    |||||||||||||||||| ||||| |||  |||||||||||| | || |||||||||||    
T  3915276 aaaccaccagataacagaatagtcgaaccagatgagaaggttctaatcgaacccaaccg 3915334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 50589538 - 50589606
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||| |||||||||||||| |||| ||| || || ||||||| |||| |||||||||| | ||||||    
T  50589538 acaaactaccagataacagagcagtcgaaccgggtgggaaggttttgatcgaacccaaccatcgaagac 50589606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 138 - 278
Target Start/End: Complemental strand, 47404 - 47264
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| ||||||||  |||||||||||||||||||| ||  |||||| ||| |||| ||||||||| ||||||||||||||||| ||||||||||    
T  47404 cctccacatagatctggatcagaaggaaacaaccaccacacgaattcaccaggcaacctgtgtttttctaacagtcgcaaactcagcacccgcaaggaag 47305  T
Q  238 aaaacaacatcgtcgcaactattataccaaaaccaccacca 278  Q
    |||||| ||||| |||  |||   |||||||||||||||||    
T  47304 aaaacatcatcgccgcggctacagtaccaaaaccaccacca 47264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 47538 - 47470
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||| ||||||||||||||||||||| ||| ||||||||  |||||||| |||||||||||||||||||    
T  47538 acaacccaccagataacagagtagtcgaaccggatgagatagttatgatcgaacccaaccgttgaagac 47470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 22696637 - 22696740
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| |||||||| |||||||||||||||||||||| |||||||||| || |||| ||||||||| || |||||||||||||| ||||||||||    
T  22696637 cctccacatagatctggatcggaaggaaacaaccaccacacataaacaccagataacctgtgtttttctaacagccgcaaactcagcacccgcaaggaag 22696736  T
Q  238 aaaa 241  Q
    ||||    
T  22696737 aaaa 22696740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 34502968 - 34502876
Alignment:
Q  149 atctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaaaa 241  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| |||| |||| |||| |  |||||||||||||| ||||||||||||||    
T  34502968 atctggattggaaggaaacaacgaccacacaaaaacaacagacaacctgtgttttactaacaaccgcaaactcagcacccgcaaggaagaaaa 34502876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 22696503 - 22696571
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||||| ||||||||| ||| |||||| ||||||||||| |||||||||||||||||||    
T  22696503 acaaaccaccagataatagagtagtcgaaccggatgaaaaggttatgatcgaacccaaccgttgaagac 22696571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 34503112 - 34503045
Alignment:
Q  5 caaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    ||||||||||||||||||||||||| ||| || | |||||||| | || ||| |||||||||||||||    
T  34503112 caaaccaccagataacagagtagtcgaacaggcttagaaggttcttatcgaaaccaaccgttgaagac 34503045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 24045649 - 24045609
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaag 44  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  24045649 acaaaccaccagataacagagtagtcgaaccggatgagaag 24045609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 287
Target Start/End: Complemental strand, 51056796 - 51056647
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||| |||| || |||||| |  ||||||||||||||  | |||||||    
T  51056796 cctccacatagatctggatcagaaggaaacaaccaccatacaaaaacaccagacaacctgtgttgttctaacaaccgcaaactcagcacctgtaaggaag 51056697  T
Q  238 aaaacaacatcgtcgcaactattataccaaaaccaccaccaacatctcct 287  Q
    |||||||||  |||||| |||  |||||||||| ||||||| || |||||    
T  51056696 aaaacaacactgtcgcagctacaataccaaaacgaccaccatcacctcct 51056647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 25498932 - 25499033
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| || ||||| ||||||||||||||||||| || |||||||||| ||  ||| ||||||||| || |||||||||| ||  ||||||||||    
T  25498932 cctccacatagatatggatcggaaggaaacaaccaccacgcataaacaccagataacttgtgtttttctaacagccgcaaactcaacatccgcaaggaag 25499031  T
Q  238 aa 239  Q
    ||    
T  25499032 aa 25499033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 38258783 - 38258847
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttga 68  Q
    |||||||||||||||| || |||||| ||| ||||||||||||| |||| |||||||||||||||    
T  38258783 acaaaccaccagataatagggtagtcgaaccggatgagaaggttctgatcgaacccaaccgttga 38258847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 51056929 - 51056861
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||||||| |||| |||||  || ||||||||||||||| |||| ||||||||||||||    
T  51056929 acaaaccaccagataacatagtaatcaaatcgggtgagaaggttatgatcgaactcaaccgttgaagac 51056861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 25498797 - 25498865
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    ||||||||| |||||| ||||||||| ||| |||||| |||||| |||| ||| |||||||||||||||    
T  25498797 acaaaccactagataatagagtagtcgaaccggatgaaaaggttctgatcgaaaccaaccgttgaagac 25498865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 49358685 - 49358718
Alignment:
Q  160 aaggaaacaaccaccacacaaaaacaccagacaa 193  Q
    ||||||||||||||||||||||||||| ||||||    
T  49358685 aaggaaacaaccaccacacaaaaacactagacaa 49358718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 49358536 - 49358604
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||| ||||||||||||||||||||| ||   || ||||||||| |||| |||||||||  ||||||||    
T  49358536 acaatccaccagataacagagtagtcgaatcagacgagaaggttctgatcgaacccaactattgaagac 49358604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 20519108 - 20519211
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||  ||| ||||||||| |  |||||||||||||| | ||||||||    
T  20519108 cctccacatagatctggatcggaaggaaacaaccaccacacaaaaactccagacaacttgtgtttttctaacaaccgcaaactcagcacccacaaggaag 20519207  T
Q  238 aaaa 241  Q
    ||||    
T  20519208 aaaa 20519211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 238
Target Start/End: Complemental strand, 38149487 - 38149387
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||  ||| |||||| || |  |||||||||||||| | ||||||||    
T  38149487 cctccatatagatctggatcggaaggaaacaaccaccacacaaaaacaccagacaacatgtgtttttccaacaaccgcaaactcagcacccacaaggaag 38149388  T
Q  238 a 238  Q
    |    
T  38149387 a 38149387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 20518976 - 20519042
Alignment:
Q  6 aaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||| ||||||||| ||| ||||||||| ||| |||| |||||||||||||||||||    
T  20518976 aaaccaccagataaaagagtagtcgaaccggatgagaatgttctgatcgaacccaaccgttgaagac 20519042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 32919487 - 32919437
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacacca 188  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  32919487 cctccacatagatctggatcggaaggaaacaaccaccacacaaaagcacca 32919437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 32946903 - 32946800
Alignment:
Q  138 cctccacatatatctggattggaaggaaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaag 237  Q
    |||||||||| || |||||  ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||  ||||||| ||||| ||||||||||    
T  32946903 cctccacatagatttggatcagaaggaaacaaccaccacacaaaaacaccagacaacctgtgtttttctaacagctgcaaacttagcacccgcaaggaag 32946804  T
Q  238 aaaa 241  Q
    ||||    
T  32946803 aaaa 32946800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 36057791 - 36057677
Alignment:
Q  164 aaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaaaacaacatcgtcgcaactattata 263  Q
    ||||||||| ||||||||||||||||||||  ||| ||||||||| || |||||||||||||  | |||||||||||||| || || |||| |||  |||    
T  36057791 aaacaaccatcacacaaaaacaccagacaacttgtgtttttctaacagccgcaaactcagcatccacaaggaagaaaacagcaccgccgcagctacaata 36057692  T
Q  264 ccaaaaccaccacca 278  Q
    ||||||| |||||||    
T  36057691 ccaaaacaaccacca 36057677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 36058919 - 36058805
Alignment:
Q  164 aaacaaccaccacacaaaaacaccagacaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaaaacaacatcgtcgcaactattata 263  Q
    ||||||||| ||||||||||||||||||||  ||| ||||||||| || |||||||||||||  | |||||||||||||| || || |||| |||  |||    
T  36058919 aaacaaccatcacacaaaaacaccagacaacttgtgtttttctaacagccgcaaactcagcatccacaaggaagaaaacagcaccgccgcagctacaata 36058820  T
Q  264 ccaaaaccaccacca 278  Q
    ||||||| |||||||    
T  36058819 ccaaaacaaccacca 36058805  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 27109807 - 27109875
Alignment:
Q  4 acaaaccaccagataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||| |||| ||||| |||||||||||||    
T  27109807 acaaaccaccagataacagagtagtcgaaccggatgagaatgttctgatcgaaccaaaccgttgaagac 27109875  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 32947027 - 32946969
Alignment:
Q  14 agataacagagtagtcaaactggatgagaaggttatgattgaacccaaccgttgaagac 72  Q
    |||||| ||||||||| ||| ||||||||||||| |||| |||||||||||||||||||    
T  32947027 agataatagagtagtcgaaccggatgagaaggttctgatcgaacccaaccgttgaagac 32946969  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 27109901 - 27109998
Alignment:
Q  190 acaatctgtatttttctaagagtcgcaaactcagcactcgcaaggaagaaaacaacatcgtcgcaactattataccaaaaccaccaccaacatctcct 287  Q
    |||| |||| ||||||||| || |||||||||||||  | |||||||||||| | || || |||| |||  ||| |||||||||||||| || |||||    
T  27109901 acaacctgtgtttttctaacaggcgcaaactcagcaaccacaaggaagaaaatagcaccgccgcagctacaatatcaaaaccaccaccatcacctcct 27109998  T

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