View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8314_high_10 (Length: 250)
Name: NF8314_high_10
Description: NF8314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8314_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 6284435 - 6284662
Alignment:
| Q |
1 |
ctaaggggtagtaattatgtttcagtgatgtggtaaaataaaaatatcaataatcaatcctaattttgattctaaaagtatggaggtcgttgttgcatgt |
100 |
Q |
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| T |
6284435 |
ctaaggggtagtaattatgtttcagtgatgtggtaaaataaaaatatcaataatcaatcctaattttgattctaaaagtatggaggtcgttgttgcatgt |
6284534 |
T |
|
| Q |
101 |
cacacaccttatatacaagtaaaaatattgagagaacaactaaagatttctcttgatgaatagcataattgattatagggtctacggattaaatttagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
6284535 |
cacacaccttatatacaagtaaaaatattgagagaacaactaaagatttctcttgatgaataacataattgattatagggtctacggattaaatttagtt |
6284634 |
T |
|
| Q |
201 |
ctaacatttttctctaaaaattatattc |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
6284635 |
ctaacatttttctctaaaaattatattc |
6284662 |
T |
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