View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8316_high_24 (Length: 263)
Name: NF8316_high_24
Description: NF8316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8316_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 10324862 - 10324625
Alignment:
| Q |
17 |
attagtgcagggaaaaagcttttaatcttattccggtgagataattctggatttcaaattttgtttgaaacatattttccatcgtaaatattgctatttc |
116 |
Q |
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| T |
10324862 |
attagtgcagggaaaaagcttttaatcgcattccggtgagataattctggatttcaaattttgtttgaaacatattttccatcgtaaatattgctgtttc |
10324763 |
T |
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| Q |
117 |
cttcattatttgattgcttgttggtttctgcattgaacatggaaatattattggctgctaccatatttttgcttgttcatttttgtgatttaacactttc |
216 |
Q |
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| T |
10324762 |
cttcattatttgattgcttgttggtttctgcattgaacatggaaatattattggctgccaccatattttggcttgttcatttttgtgatttaacactttc |
10324663 |
T |
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| Q |
217 |
cgttacaattttgctcttacatgaaatcacagtattat |
254 |
Q |
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|||||||||||||||||||| ||||||||||||||||| |
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| T |
10324662 |
cgttacaattttgctcttacctgaaatcacagtattat |
10324625 |
T |
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