View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8316_low_18 (Length: 328)
Name: NF8316_low_18
Description: NF8316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8316_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 97 - 320
Target Start/End: Original strand, 36522119 - 36522342
Alignment:
| Q |
97 |
caatcaacttaaagcttccatttattgctaacccttaacgtatcttccaatatatgttgacagattcccacttttttggtcctcaaatccctttacacat |
196 |
Q |
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| T |
36522119 |
caatcaacttaaagcttcaatttattgctaacccttaacgtatcttccaatatatgttgacatattcccacttttttggtcctcaaatccctttacacat |
36522218 |
T |
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| Q |
197 |
tcaaataacgctattctaggaccaaaaagtacaagtatacatgatctttcacagcccactttacactaacttcaatgttaatagttccttcttaccaaag |
296 |
Q |
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| T |
36522219 |
tcaaataacgctattctaggaccaaaaagaacaagtatacatgatctttcacaacccactttacactaacttcaatgctaatagttccttcttaccaaaa |
36522318 |
T |
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| Q |
297 |
cattggaaaaagcccatgatgatg |
320 |
Q |
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|||||||||||||||||||||||| |
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| T |
36522319 |
cattggaaaaagcccatgatgatg |
36522342 |
T |
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