View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8316_low_6 (Length: 487)

Name: NF8316_low_6
Description: NF8316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8316_low_6
NF8316_low_6
[»] chr1 (32 HSPs)
chr1 (12-281)||(45682755-45683024)
chr1 (318-487)||(45682548-45682717)
chr1 (341-390)||(45286250-45286299)
chr1 (345-380)||(17191220-17191255)
chr1 (421-487)||(29570682-29570748)
chr1 (345-390)||(5586734-5586779)
chr1 (345-390)||(9877650-9877695)
chr1 (341-390)||(32694555-32694604)
chr1 (345-390)||(40770387-40770432)
chr1 (345-390)||(40934665-40934710)
chr1 (345-390)||(49021689-49021734)
chr1 (345-390)||(49021913-49021958)
chr1 (330-365)||(4151461-4151496)
chr1 (323-390)||(5618318-5618385)
chr1 (345-380)||(6488893-6488928)
chr1 (341-380)||(50312024-50312063)
chr1 (345-390)||(731046-731091)
chr1 (345-390)||(4695183-4695228)
chr1 (345-390)||(5618093-5618138)
chr1 (341-378)||(8828839-8828876)
chr1 (345-390)||(8853342-8853387)
chr1 (345-390)||(10296614-10296659)
chr1 (345-390)||(12649944-12649989)
chr1 (345-390)||(17504290-17504335)
chr1 (345-390)||(28554212-28554257)
chr1 (426-487)||(30027071-30027132)
chr1 (345-390)||(31289276-31289321)
chr1 (345-390)||(34480206-34480251)
chr1 (341-390)||(40770158-40770207)
chr1 (346-390)||(12650169-12650213)
chr1 (345-389)||(26095510-26095554)
chr1 (331-403)||(37332254-37332326)
[»] chr5 (26 HSPs)
chr5 (420-487)||(12875811-12875878)
chr5 (330-389)||(7370996-7371055)
chr5 (345-390)||(1099139-1099184)
chr5 (345-390)||(16737050-16737095)
chr5 (341-390)||(31485975-31486024)
chr5 (322-390)||(19130869-19130937)
chr5 (346-390)||(33429556-33429600)
chr5 (345-380)||(3168337-3168372)
chr5 (345-380)||(7601850-7601885)
chr5 (341-380)||(7610519-7610558)
chr5 (344-390)||(3974234-3974280)
chr5 (342-380)||(17760018-17760056)
chr5 (346-380)||(30129498-30129532)
chr5 (345-390)||(1643561-1643606)
chr5 (345-390)||(7601615-7601660)
chr5 (345-390)||(14871756-14871801)
chr5 (345-390)||(16736823-16736868)
chr5 (345-390)||(19131117-19131162)
chr5 (345-390)||(33381451-33381496)
chr5 (345-390)||(33381675-33381720)
chr5 (345-390)||(33429780-33429825)
chr5 (345-390)||(39589637-39589682)
chr5 (334-370)||(2876405-2876441)
chr5 (330-378)||(27337842-27337890)
chr5 (346-390)||(32772014-32772058)
chr5 (346-390)||(42611028-42611072)
[»] chr7 (35 HSPs)
chr7 (426-487)||(41317042-41317103)
chr7 (341-390)||(41749827-41749876)
chr7 (341-390)||(2699864-2699913)
chr7 (341-390)||(7149538-7149587)
chr7 (330-399)||(7282224-7282293)
chr7 (345-390)||(11338139-11338184)
chr7 (341-390)||(21733315-21733364)
chr7 (345-378)||(31115859-31115892)
chr7 (345-390)||(43575084-43575129)
chr7 (345-390)||(45055344-45055389)
chr7 (345-390)||(45867692-45867737)
chr7 (345-390)||(47221729-47221774)
chr7 (322-390)||(38494913-38494981)
chr7 (345-380)||(8522569-8522604)
chr7 (345-390)||(7149313-7149358)
chr7 (345-390)||(8805766-8805811)
chr7 (345-390)||(8805991-8806036)
chr7 (345-390)||(8949314-8949359)
chr7 (345-390)||(12423867-12423912)
chr7 (345-390)||(21733090-21733135)
chr7 (345-390)||(24331401-24331446)
chr7 (345-390)||(34287764-34287809)
chr7 (345-390)||(38495161-38495206)
chr7 (345-390)||(41922304-41922349)
chr7 (345-390)||(42391318-42391363)
chr7 (345-390)||(43575297-43575342)
chr7 (345-390)||(44458031-44458076)
chr7 (345-390)||(45055569-45055614)
chr7 (345-390)||(45062309-45062354)
chr7 (345-390)||(47221942-47221987)
chr7 (346-390)||(11337915-11337959)
chr7 (346-390)||(28588340-28588384)
chr7 (342-390)||(34287535-34287583)
chr7 (346-390)||(45062085-45062129)
chr7 (346-390)||(46426684-46426728)
[»] chr6 (24 HSPs)
chr6 (426-487)||(1368266-1368327)
chr6 (345-390)||(13853164-13853209)
chr6 (345-390)||(8129780-8129825)
chr6 (341-390)||(12240728-12240777)
chr6 (345-390)||(21926086-21926131)
chr6 (341-374)||(25121544-25121577)
chr6 (341-389)||(20028021-20028069)
chr6 (341-380)||(24335551-24335590)
chr6 (421-487)||(1375869-1375935)
chr6 (421-487)||(1383617-1383683)
chr6 (345-390)||(684975-685020)
chr6 (341-390)||(685200-685249)
chr6 (345-390)||(2316736-2316781)
chr6 (345-390)||(2882905-2882950)
chr6 (341-374)||(3011930-3011963)
chr6 (341-390)||(3105622-3105671)
chr6 (345-390)||(9899217-9899262)
chr6 (345-390)||(9899442-9899487)
chr6 (341-390)||(11361807-11361856)
chr6 (345-390)||(11362027-11362072)
chr6 (345-390)||(22568785-22568830)
chr6 (342-390)||(9220350-9220398)
chr6 (346-390)||(21926311-21926355)
chr6 (346-390)||(24325015-24325059)
[»] chr4 (22 HSPs)
chr4 (345-390)||(16530340-16530385)
chr4 (345-390)||(10993647-10993692)
chr4 (345-390)||(32922089-32922134)
chr4 (345-390)||(46648091-46648136)
chr4 (346-390)||(39791940-39791984)
chr4 (339-390)||(17040157-17040208)
chr4 (345-380)||(39792176-39792211)
chr4 (341-380)||(45655711-45655750)
chr4 (345-390)||(9902675-9902720)
chr4 (345-390)||(9902903-9902948)
chr4 (393-438)||(17040098-17040143)
chr4 (345-390)||(20984161-20984206)
chr4 (345-390)||(32922314-32922359)
chr4 (345-390)||(35131043-35131088)
chr4 (341-390)||(41935511-41935560)
chr4 (345-390)||(44551162-44551207)
chr4 (345-390)||(52537901-52537946)
chr4 (345-390)||(52538126-52538171)
chr4 (345-390)||(52654179-52654224)
chr4 (427-487)||(24559534-24559594)
chr4 (346-390)||(26843046-26843090)
chr4 (348-380)||(49498696-49498728)
[»] chr2 (21 HSPs)
chr2 (426-487)||(474707-474768)
chr2 (345-390)||(1479050-1479095)
chr2 (345-390)||(10714255-10714300)
chr2 (341-390)||(28788885-28788934)
chr2 (345-390)||(30488102-30488147)
chr2 (342-390)||(11122663-11122711)
chr2 (392-436)||(29154142-29154186)
chr2 (345-380)||(31557005-31557040)
chr2 (339-374)||(41537496-41537531)
chr2 (345-390)||(341334-341379)
chr2 (345-390)||(1650525-1650570)
chr2 (345-374)||(10192106-10192135)
chr2 (345-390)||(15461502-15461547)
chr2 (345-390)||(23926413-23926458)
chr2 (345-390)||(23926638-23926683)
chr2 (345-390)||(26499658-26499703)
chr2 (345-390)||(28789114-28789159)
chr2 (345-390)||(30488327-30488372)
chr2 (345-390)||(35412124-35412169)
chr2 (345-390)||(42950756-42950801)
chr2 (348-388)||(21251807-21251847)
[»] chr3 (27 HSPs)
chr3 (330-390)||(25061308-25061368)
chr3 (330-380)||(25061535-25061585)
chr3 (345-390)||(11221239-11221284)
chr3 (345-390)||(31574500-31574545)
chr3 (330-390)||(32809161-32809221)
chr3 (345-380)||(21017182-21017217)
chr3 (346-380)||(2397809-2397843)
chr3 (421-487)||(29560440-29560506)
chr3 (345-391)||(35220591-35220637)
chr3 (346-380)||(36546125-36546159)
chr3 (346-380)||(36562155-36562189)
chr3 (345-390)||(6954244-6954289)
chr3 (349-390)||(13997164-13997205)
chr3 (345-390)||(14463370-14463415)
chr3 (345-390)||(18169001-18169046)
chr3 (345-390)||(20209172-20209217)
chr3 (345-390)||(29434323-29434368)
chr3 (345-390)||(35415489-35415534)
chr3 (343-380)||(39778300-39778337)
chr3 (345-390)||(44664643-44664688)
chr3 (345-390)||(44920145-44920190)
chr3 (345-390)||(45171600-45171645)
chr3 (345-390)||(46292604-46292649)
chr3 (345-390)||(50710725-50710770)
chr3 (345-390)||(50711242-50711287)
chr3 (346-390)||(2773392-2773436)
chr3 (346-390)||(29434548-29434592)
[»] chr8 (21 HSPs)
chr8 (341-379)||(33278953-33278991)
chr8 (345-390)||(17494970-17495015)
chr8 (345-390)||(26938208-26938253)
chr8 (345-390)||(30253648-30253693)
chr8 (330-390)||(148300-148360)
chr8 (330-390)||(42685035-42685095)
chr8 (345-390)||(8156955-8157000)
chr8 (345-390)||(18805768-18805813)
chr8 (345-390)||(27713011-27713056)
chr8 (345-390)||(28828238-28828283)
chr8 (345-390)||(29596424-29596469)
chr8 (345-390)||(33279185-33279230)
chr8 (345-390)||(34632472-34632517)
chr8 (345-390)||(36556782-36556827)
chr8 (341-390)||(40277240-40277289)
chr8 (345-390)||(41617287-41617332)
chr8 (345-389)||(21660748-21660792)
chr8 (346-390)||(24419465-24419509)
chr8 (346-390)||(26187375-26187419)
chr8 (346-390)||(34198858-34198902)
chr8 (346-390)||(36556558-36556602)
[»] scaffold0024 (1 HSPs)
scaffold0024 (421-487)||(88539-88605)
[»] scaffold0592 (1 HSPs)
scaffold0592 (341-390)||(8635-8684)


Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 12 - 281
Target Start/End: Complemental strand, 45683024 - 45682755
Alignment:
Q  12 ataatactacaattgcttctcagttcatccaaaaggaacagattcctcggtttaacttattacgatatattatataaaatatacaaaatactgggagttc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45683024 ataatactacaattgcttctcagttcatccaaaaggaacagattccttggtttaacttattacgatatattatataaaatatacaaaatactgggagttc 45682925  T
Q  112 aaacttaagtcaaatttaattcatctaaaggtttgagtagtggaattagctttttctagatgtaaaggaaacctaacatagatccataatgggtgcaacc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45682924 aaacttaagtcaaatttaattcatctaaaggtttgagtagtggaattagctttttctagatgtaaaggaaacctaacatagatccataatgggtgcaacc 45682825  T
Q  212 cttccccagattcattcatgatgggattattacaagaccaagttacccttttacgcacccctacccctac 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45682824 cttccccagattcattcatgatgggattattacaagaccaagttacccttttacgcacccctacccctac 45682755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 318 - 487
Target Start/End: Complemental strand, 45682717 - 45682548
Alignment:
Q  318 gcagaggcaacgttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttcacgtccttttggtccatgtgcatatgga 417  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45682717 gcagaggcaacattactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttcacgtccttttggtccatgtgcatatgga 45682618  T
Q  418 acttcaagcttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  45682617 atttcaagcttcaaatctatggtctttcatccatgtttgcatatgaatcttatatttaaagcttgaaaat 45682548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 45286250 - 45286299
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  45286250 gtctcttaacttaatttcaggtaacaatttggtcctttatctttttttca 45286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 380
Target Start/End: Original strand, 17191220 - 17191255
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttat 380  Q
    ||||||||||||||||||||||||||||||||||||    
T  17191220 cttaacttaatttcaggtaacaatttggtcatttat 17191255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 487
Target Start/End: Original strand, 29570682 - 29570748
Alignment:
Q  421 tcaagcttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    |||| ||||||||||||||||||| | | |||||| ||||||||||||  |||| ||||||||||||    
T  29570682 tcaatcttcaaatctatggtctttcacctatgtttgcatatgaatctttgatttgaagcttgaaaat 29570748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 5586779 - 5586734
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  5586779 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 5586734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 9877695 - 9877650
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  9877695 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 9877650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 32694604 - 32694555
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  32694604 gtctcttaacttaatttcaggtaacagtttggtcctttatctttttttca 32694555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 40770432 - 40770387
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  40770432 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 40770387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 40934710 - 40934665
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  40934710 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 40934665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 49021689 - 49021734
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  49021689 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 49021734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 49021958 - 49021913
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  49021958 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 49021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 365
Target Start/End: Complemental strand, 4151496 - 4151461
Alignment:
Q  330 ttactcttgtggtctcttaacttaatttcaggtaac 365  Q
    ||||||||||||||||||||| ||||||||||||||    
T  4151496 ttactcttgtggtctcttaacataatttcaggtaac 4151461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 5618385 - 5618318
Alignment:
Q  323 ggcaacgttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||| ||||| ||| | ||| |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  5618385 ggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttca 5618318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Original strand, 6488893 - 6488928
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||||||||| |||||||||||||    
T  6488893 cttaacttaatttcaggtaacagtttggtcatttat 6488928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 50312024 - 50312063
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttat 380  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  50312024 gtctcttaatttaatttcaggtaacagtttggtcatttat 50312063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 731091 - 731046
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||| ||||| ||| ||||| |||||||||    
T  731091 cttaacttaatttcaggtaataatttagtcctttatcattttttca 731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 4695228 - 4695183
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  4695228 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 4695183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 5618093 - 5618138
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  5618093 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 5618138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 8828876 - 8828839
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcattt 378  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  8828876 gtctcttaacttaatttcaggtaacagtttagtcattt 8828839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 8853387 - 8853342
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  8853387 cttaacttaatttcaggtaacagtttggtcctttatttttttttca 8853342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 10296614 - 10296659
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  10296614 cttaacttaatttcaggtaacagtttggtcttttatctttttttca 10296659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 12649944 - 12649989
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  12649944 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 12649989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 17504335 - 17504290
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  17504335 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 17504290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 28554212 - 28554257
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  28554212 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 28554257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 487
Target Start/End: Complemental strand, 30027132 - 30027071
Alignment:
Q  426 cttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    |||||||||||||||  || | |||||||| ||||||||| ||| |||| ||||||||||||    
T  30027132 cttcaaatctatggttcttcagccatgtttgcatatgaattttagatttgaagcttgaaaat 30027071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 31289276 - 31289321
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  31289276 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 31289321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 34480206 - 34480251
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  34480206 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 34480251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 40770158 - 40770207
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| || |||| |||||  ||||||||    
T  40770158 gtctcttaacttaatttcaggtaacagttgggtcttttatctttttttca 40770207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 12650213 - 12650169
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  12650213 ttaacttaatttcaggtaacagtttggtcctttatctttttttca 12650169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 26095510 - 26095554
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttc 389  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||    
T  26095510 cttaacttaatttcaggtaacagtttggtcctttatctttttttc 26095554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 403
Target Start/End: Complemental strand, 37332326 - 37332254
Alignment:
Q  331 tactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttcacgtccttttggtc 403  Q
    ||||| ||||| | |||||| |||||| |||||||||||| ||| |||||  |||| ||||||| ||||||||    
T  37332326 tactcctgtggccccttaacctaattttaggtaacaatttagtcttttatctttttgtcacgtcattttggtc 37332254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 12875811 - 12875878
Alignment:
Q  420 ttcaagcttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    ||||| ||||||||||||||| ||||||| |||||| |||| |||| ||| |||||||||||||||||    
T  12875811 ttcaatcttcaaatctatggttttttatctatgtttgcataagaatattagatttaaagcttgaaaat 12875878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 7370996 - 7371055
Alignment:
Q  330 ttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttc 389  Q
    |||||| ||||||| ||||||||||||| |||||||||||| |||||||||  |||||||    
T  7370996 ttactcctgtggtcccttaacttaattttaggtaacaatttagtcatttatctttttttc 7371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 1099184 - 1099139
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  1099184 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 1099139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 16737095 - 16737050
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||    
T  16737095 cttaacttaatttcaggtaataatttggtcatttatctttttttca 16737050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 31485975 - 31486024
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  31485975 gtctcttaacttaatttcaggtaacagtttggtcctttatctttttttca 31486024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 19130869 - 19130937
Alignment:
Q  322 aggcaacgttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||| ||||| ||| | ||| |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  19130869 aggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttca 19130937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 33429556 - 33429600
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||    
T  33429556 ttaacttaatttcaggtaacaatttggtcctttatctttttttca 33429600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 3168372 - 3168337
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttat 380  Q
    ||||||||||||||||||||||||||||| ||||||    
T  3168372 cttaacttaatttcaggtaacaatttggttatttat 3168337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 7601885 - 7601850
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||||||||| |||||||||||||    
T  7601885 cttaacttaatttcaggtaacagtttggtcatttat 7601850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 7610558 - 7610519
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  7610558 gtctcttaacttaatttcaggtaacagtttggtcctttat 7610519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 390
Target Start/End: Original strand, 3974234 - 3974280
Alignment:
Q  344 tcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||| ||||||||||||| |||||  ||||||||    
T  3974234 tcttaacttaatttcagataacaatttggtcctttatctttttttca 3974280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 380
Target Start/End: Complemental strand, 17760056 - 17760018
Alignment:
Q  342 tctcttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  17760056 tctcttaacttaattttaggtaacaatttggttatttat 17760018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 380
Target Start/End: Original strand, 30129498 - 30129532
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttat 380  Q
    ||||||||||||||||||||||||||||| |||||    
T  30129498 ttaacttaatttcaggtaacaatttggtcttttat 30129532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 1643561 - 1643606
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  1643561 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 1643606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 7601615 - 7601660
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  7601615 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 7601660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 14871756 - 14871801
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  14871756 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 14871801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 16736823 - 16736868
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  16736823 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 16736868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 19131162 - 19131117
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  19131162 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 19131117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 33381451 - 33381496
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  33381451 cttaacttaatttcaggtaacagtttggtcttttatctttttttca 33381496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 33381720 - 33381675
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  33381720 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 33381675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 33429825 - 33429780
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  33429825 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 33429780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 39589637 - 39589682
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  39589637 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 39589682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 2876441 - 2876405
Alignment:
Q  334 tcttgtggtctcttaacttaatttcaggtaacaattt 370  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  2876441 tcttgtggtttcttaacttaatttcagataacaattt 2876405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 27337842 - 27337890
Alignment:
Q  330 ttactcttgtggtctcttaacttaatttcaggtaacaatttggtcattt 378  Q
    |||| ||||| |||||||||||||||||||  ||||||||| |||||||    
T  27337842 ttacacttgtagtctcttaacttaatttcaaataacaatttagtcattt 27337890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 32772014 - 32772058
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  32772014 ttaacttaatttcaggtaacagtttggtcctttatctttttttca 32772058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 42611072 - 42611028
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  42611072 ttaacttaatttcaggtaacagtttggtcctttatctttttttca 42611028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 426 - 487
Target Start/End: Original strand, 41317042 - 41317103
Alignment:
Q  426 cttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    ||||||||||||||||||| || ||||||| | ||||||| ||| |||||||||||||||||    
T  41317042 cttcaaatctatggtctttcattcatgtttgcctatgaattttagatttaaagcttgaaaat 41317103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 41749876 - 41749827
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  41749876 gtctcttagcttaatttcaggtaacaatttggtcatttatctttttttca 41749827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 2699913 - 2699864
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  2699913 gtctcttaacttaatttcaggtaacagtttggtcctttatctttttttca 2699864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 7149587 - 7149538
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||| ||||| |||||||||||||  ||||||||    
T  7149587 gtctcttaacttaatttcagataacagtttggtcatttatctttttttca 7149538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 7282293 - 7282224
Alignment:
Q  330 ttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttcacgtcctttt 399  Q
    |||| ||||| |||||||||||||||||| | ||||||||| |||| ||||  |||||||||||| ||||    
T  7282293 ttacacttgttgtctcttaacttaatttctgataacaattttgtcaattatctttttttcacgtcatttt 7282224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 11338184 - 11338139
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  11338184 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 11338139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 21733364 - 21733315
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| ||| |||||  ||||||||    
T  21733364 gtctcttaacttaatttcaggtaacaatttcgtcctttatctttttttca 21733315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 31115859 - 31115892
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcattt 378  Q
    ||||||||||||||||||||||||||||||||||    
T  31115859 cttaacttaatttcaggtaacaatttggtcattt 31115892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 43575084 - 43575129
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  43575084 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 43575129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 45055344 - 45055389
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  45055344 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 45055389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 45867737 - 45867692
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  45867737 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 45867692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 47221729 - 47221774
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  47221729 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 47221774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 38494913 - 38494981
Alignment:
Q  322 aggcaacgttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||| ||||| ||| | ||| |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  38494913 aggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttca 38494981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 8522604 - 8522569
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||||||||||||||||| |||||    
T  8522604 cttaacttaatttcaggtaacaatttggtcctttat 8522569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 7149313 - 7149358
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  7149313 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 7149358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 8805766 - 8805811
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  8805766 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 8805811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 8806036 - 8805991
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  8806036 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 8805991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 8949314 - 8949359
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  8949314 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 8949359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 12423867 - 12423912
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  12423867 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 12423912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 21733090 - 21733135
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  21733090 cttaacttaatttcaggtaacagtttggtcttttatctttttttca 21733135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 24331401 - 24331446
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  24331401 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 24331446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 34287809 - 34287764
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  34287809 cttaacttaatttcaggtaacactttggtcctttatctttttttca 34287764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 38495206 - 38495161
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  38495206 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 38495161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 41922304 - 41922349
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  41922304 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 41922349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 42391318 - 42391363
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  42391318 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 42391363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 43575342 - 43575297
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  43575342 cttaacttaatttcaggtaacattttggtcctttatctttttttca 43575297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 44458076 - 44458031
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  44458076 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 44458031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 45055614 - 45055569
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  45055614 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 45055569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 45062354 - 45062309
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  45062354 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 45062309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 47221987 - 47221942
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  47221987 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 47221942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 11337915 - 11337959
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||| |||||||||||||| |||||  ||||||||    
T  11337915 ttaacttaatttcatgtaacaatttggtcctttatctttttttca 11337959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 28588340 - 28588384
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  28588340 ttaacttaatttcaggtaacagtttggtcttttatctttttttca 28588384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 34287535 - 34287583
Alignment:
Q  342 tctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||| |||||||| ||||||| |||||  ||||||||    
T  34287535 tctcttaacttaattttaggtaacagtttggtcctttatctttttttca 34287583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 45062085 - 45062129
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  45062085 ttaacttaatttcaggtaacagtttggtcctttatctttttttca 45062129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 46426684 - 46426728
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||| |||||||||||||||| |||||  ||||||||    
T  46426684 ttaacttaattttaggtaacaatttggtcctttatctttttttca 46426728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 426 - 487
Target Start/End: Complemental strand, 1368327 - 1368266
Alignment:
Q  426 cttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    ||||||||||||| ||||| || |||||||| | |||||||||| |||||||||||||||||    
T  1368327 cttcaaatctatgttctttcattcatgttttgacatgaatcttagatttaaagcttgaaaat 1368266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 13853164 - 13853209
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||    
T  13853164 cttaacttaatttcaggtaacaatttggtcatttatctttttttca 13853209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 8129825 - 8129780
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  8129825 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 8129780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 12240777 - 12240728
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  12240777 gtctcttaacttaatttcaggtaacagtttggtcctttatctttttttca 12240728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 21926086 - 21926131
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||||    
T  21926086 cttaacttaatttcaggtaacagtttggtcctttatatttttttca 21926131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 374
Target Start/End: Original strand, 25121544 - 25121577
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtc 374  Q
    ||||||||||||||||||||||||||||||||||    
T  25121544 gtctcttaacttaatttcaggtaacaatttggtc 25121577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 389
Target Start/End: Complemental strand, 20028069 - 20028021
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttc 389  Q
    |||||||||||||||||||||||||| ||||||| |||||  |||||||    
T  20028069 gtctcttaacttaatttcaggtaacagtttggtcttttatctttttttc 20028021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 24335551 - 24335590
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttat 380  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  24335551 gtctcttaatttaatttcaggtaacaatttggtcctttat 24335590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 421 - 487
Target Start/End: Complemental strand, 1375935 - 1375869
Alignment:
Q  421 tcaagcttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    |||| ||||||||||||| ||||| || ||||||| | |||||| |||| ||||||| |||||||||    
T  1375935 tcaatcttcaaatctatgttctttcattcatgtttgcctatgaaccttagatttaaaacttgaaaat 1375869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 421 - 487
Target Start/End: Complemental strand, 1383683 - 1383617
Alignment:
Q  421 tcaagcttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    |||| ||||||||||||| ||||| || ||||||| | |||||| |||| ||||||| |||||||||    
T  1383683 tcaatcttcaaatctatgttctttcattcatgtttgcctatgaaccttagatttaaaacttgaaaat 1383617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 684975 - 685020
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||| ||||||||||||| |||||  ||||||||    
T  684975 cttaacttaatttcagataacaatttggtcctttatctttttttca 685020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 685249 - 685200
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| ||| ||| |||||  ||||||||    
T  685249 gtctcttaacttaatttcaggtaacagtttagtcctttatctttttttca 685200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 2316781 - 2316736
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  2316781 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 2316736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 2882905 - 2882950
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  2882905 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 2882950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 374
Target Start/End: Original strand, 3011930 - 3011963
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtc 374  Q
    |||||||||||||||||||||||||| |||||||    
T  3011930 gtctcttaacttaatttcaggtaacagtttggtc 3011963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 3105622 - 3105671
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||  ||||||| |||||  ||||||||    
T  3105622 gtctcttaacttaatttcaggtaactgtttggtcctttatctttttttca 3105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 9899217 - 9899262
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  9899217 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 9899262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 9899487 - 9899442
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  9899487 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 9899442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 11361807 - 11361856
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||| |||||||||||||||| ||| |||||||||  ||||||||    
T  11361807 gtctcttaatttaatttcaggtaacagtttagtcatttatctttttttca 11361856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 11362072 - 11362027
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||| ||||||||||||| |||||  ||||||||    
T  11362072 cttaacttaatttcagataacaatttggtcctttatctttttttca 11362027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 22568785 - 22568830
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  22568785 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 22568830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 390
Target Start/End: Complemental strand, 9220398 - 9220350
Alignment:
Q  342 tctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||| | ||||||| |||||  ||||||||    
T  9220398 tctcttaacttaatttcaggtaagagtttggtcttttatctttttttca 9220350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 21926355 - 21926311
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  21926355 ttaacttaatttcaggtaacagtttggtcctttatctttttttca 21926311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 24325015 - 24325059
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||||||| | |||||  ||||||||    
T  24325015 ttaacttaatttcaggtaacaatttggccctttatctttttttca 24325059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 16530340 - 16530385
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||    
T  16530340 cttaacttaatttcaggtaacaatttggtcatttatctttttttca 16530385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 10993647 - 10993692
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  10993647 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 10993692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 32922089 - 32922134
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  32922089 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 32922134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 46648091 - 46648136
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  46648091 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 46648136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 39791940 - 39791984
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||    
T  39791940 ttaacttaatttcaggtaacaatttggtcctttatctttttttca 39791984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 390
Target Start/End: Complemental strand, 17040208 - 17040157
Alignment:
Q  339 tggtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||| |||||||||||||||| ||||||||||||| |||||  ||||||||    
T  17040208 tggtcccttaacttaatttcagttaacaatttggtcctttatctttttttca 17040157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 39792211 - 39792176
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||||||||||||||||| |||||    
T  39792211 cttaacttaatttcaggtaacaatttggtcctttat 39792176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 45655711 - 45655750
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  45655711 gtctcttaacttaatttcaggtaacaattttgtcttttat 45655750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 9902675 - 9902720
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  9902675 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 9902720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 9902948 - 9902903
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  9902948 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 9902903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 17040143 - 17040098
Alignment:
Q  393 tccttttggtccatgtgcatatggaacttcaagcttcaaatctatg 438  Q
    |||||||||| ||| ||||||||||  |||||||||||||||||||    
T  17040143 tccttttggttcatttgcatatggattttcaagcttcaaatctatg 17040098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 20984206 - 20984161
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  20984206 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 20984161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 32922359 - 32922314
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  32922359 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 32922314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 35131088 - 35131043
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  35131088 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 35131043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 41935511 - 41935560
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| || |||| |||||  ||||||||    
T  41935511 gtctcttaacttaatttcaggtaacagttcggtcctttatctttttttca 41935560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 44551207 - 44551162
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  44551207 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 44551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 52537901 - 52537946
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  52537901 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 52537946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 52538171 - 52538126
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  52538171 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 52538126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 52654224 - 52654179
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  52654224 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 52654179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 487
Target Start/End: Original strand, 24559534 - 24559594
Alignment:
Q  427 ttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    ||||||||||||||| || || ||||||||||||||||| ||| |||| | | ||||||||    
T  24559534 ttcaaatctatggtcattcattcatgttttcatatgaattttagattttatgtttgaaaat 24559594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 26843090 - 26843046
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  26843090 ttaacttaatttcaggtaacagtttggtcctttatctttttttca 26843046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 380
Target Start/End: Complemental strand, 49498728 - 49498696
Alignment:
Q  348 aacttaatttcaggtaacaatttggtcatttat 380  Q
    ||||||||||||||||||||||||||| |||||    
T  49498728 aacttaatttcaggtaacaatttggtcctttat 49498696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 426 - 487
Target Start/End: Original strand, 474707 - 474768
Alignment:
Q  426 cttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    |||||||||||||||| || | |||||||| ||||||||||||| |||| ||||||||||||    
T  474707 cttcaaatctatggtccttcacccatgtttgcatatgaatcttaaatttgaagcttgaaaat 474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 1479050 - 1479095
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||    
T  1479050 cttaacttaatttcaggtaataatttggtcatttatctttttttca 1479095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 10714300 - 10714255
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  10714300 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 10714255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 28788885 - 28788934
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  28788885 gtctcttaacttaatttcaggtaacagtttggtcctttatctttttttca 28788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 30488102 - 30488147
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||    
T  30488102 cttaacttaatttcaggtaacaatttgatcatttatctttttttca 30488147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 11122663 - 11122711
Alignment:
Q  342 tctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||||| ||||||| ||||||  |||||||    
T  11122663 tctcttaacttaatttcaggtaacagtttggtcctttatatatttttca 11122711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 29154142 - 29154186
Alignment:
Q  392 gtccttttggtccatgtgcatatggaacttcaagcttcaaatcta 436  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||    
T  29154142 gtccttttggtccattttcatatggatcttcaagcttcaaatcta 29154186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 31557040 - 31557005
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||||||||| |||||||||||||    
T  31557040 cttaacttaatttcaggtaacagtttggtcatttat 31557005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 374
Target Start/End: Original strand, 41537496 - 41537531
Alignment:
Q  339 tggtctcttaacttaatttcaggtaacaatttggtc 374  Q
    ||||| ||||||||||||||||||||||||||||||    
T  41537496 tggtcccttaacttaatttcaggtaacaatttggtc 41537531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 341334 - 341379
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  341334 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 341379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 1650525 - 1650570
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  1650525 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 1650570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 374
Target Start/End: Original strand, 10192106 - 10192135
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtc 374  Q
    ||||||||||||||||||||||||||||||    
T  10192106 cttaacttaatttcaggtaacaatttggtc 10192135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 15461547 - 15461502
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||| |||||||||  ||||||||    
T  15461547 cttaacttaatttcaggtaacagtttagtcatttatctttttttca 15461502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 23926413 - 23926458
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||| |||||||||  ||||||||    
T  23926413 cttaacttaatttcaggtaacagtttcgtcatttatctttttttca 23926458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 23926683 - 23926638
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||||||| || |||||  ||||||||    
T  23926683 cttaacttaatttcaggtaacaatttgatcttttatctttttttca 23926638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 26499703 - 26499658
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  26499703 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 26499658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 28789159 - 28789114
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  28789159 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 28789114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 30488372 - 30488327
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  30488372 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 30488327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 35412169 - 35412124
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  35412169 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 35412124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 42950801 - 42950756
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||| |||||||||||||||| |||||||||||||  ||||||||    
T  42950801 cttaatttaatttcaggtaacagtttggtcatttatctttttttca 42950756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 21251807 - 21251847
Alignment:
Q  348 aacttaatttcaggtaacaatttggtcatttataatttttt 388  Q
    ||||||||||||||||||| ||| |||||||||| ||||||    
T  21251807 aacttaatttcaggtaacactttcgtcatttatattttttt 21251847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 25061308 - 25061368
Alignment:
Q  330 ttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||| |||||  ||||||||    
T  25061308 ttacacttttggtcccttaacttaatttcaggtaacaatttggtcctttatctttttttca 25061368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 380
Target Start/End: Complemental strand, 25061585 - 25061535
Alignment:
Q  330 ttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||| |||||    
T  25061585 ttacacttttggtctcttaacttaatttcaggtaacagtttggtcctttat 25061535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 11221284 - 11221239
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  11221284 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 11221239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 31574545 - 31574500
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  31574545 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 31574500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 32809161 - 32809221
Alignment:
Q  330 ttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||| ||| ||||| ||||| |||||||||||||||||||||||| |||||  ||||||||    
T  32809161 ttacacttttggtcccttaatttaatttcaggtaacaatttggtcctttatctttttttca 32809221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 21017217 - 21017182
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||||||||| |||||||||||||    
T  21017217 cttaacttaatttcaggtaacagtttggtcatttat 21017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 380
Target Start/End: Original strand, 2397809 - 2397843
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttat 380  Q
    ||||||||||||||||||||||||| |||||||||    
T  2397809 ttaacttaatttcaggtaacaattttgtcatttat 2397843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 421 - 487
Target Start/End: Complemental strand, 29560506 - 29560440
Alignment:
Q  421 tcaagcttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    |||| |||||||| |||||||||| ||| |||||| |||||||||||||  ||| ||| ||||||||    
T  29560506 tcaatcttcaaatatatggtctttcatctatgtttgcatatgaatcttaactttgaagattgaaaat 29560440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 35220591 - 35220637
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttcac 391  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||    
T  35220591 cttaacttaatttcagataacaatttcgtcatttatctttttttcac 35220637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 380
Target Start/End: Original strand, 36546125 - 36546159
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttat 380  Q
    ||||||||||||||||||||||||||||| |||||    
T  36546125 ttaacttaatttcaggtaacaatttggtcctttat 36546159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 380
Target Start/End: Complemental strand, 36562189 - 36562155
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttat 380  Q
    ||||||||||||||||||||||||||||| |||||    
T  36562189 ttaacttaatttcaggtaacaatttggtcctttat 36562155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 6954289 - 6954244
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||| || |||||||||||||||||||  ||||||||    
T  6954289 cttaacttaattttagataacaatttggtcatttatctttttttca 6954244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 13997205 - 13997164
Alignment:
Q  349 acttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| |||||  ||||||||    
T  13997205 acttaatttcaggtaacaatttggtcctttatctttttttca 13997164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 14463415 - 14463370
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  14463415 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 14463370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 18169046 - 18169001
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||| ||||| |||||||||||||  ||||||||    
T  18169046 cttaacttaatttcagataacagtttggtcatttatctttttttca 18169001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 20209172 - 20209217
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  20209172 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 20209217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 29434323 - 29434368
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||||||||| || |||||  ||||||||    
T  29434323 cttaacttaatttcaggtaacaatttgatcctttatctttttttca 29434368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 35415534 - 35415489
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  35415534 cttaacttaatttcaggtaacagtttggtcttttatctttttttca 35415489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 380
Target Start/End: Original strand, 39778300 - 39778337
Alignment:
Q  343 ctcttaacttaatttcaggtaacaatttggtcatttat 380  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  39778300 ctcttaacttaatttcaggtaacagtttagtcatttat 39778337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 44664643 - 44664688
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||| ||| |||||  ||||||||    
T  44664643 cttaacttaatttcaggtaacaatttagtcctttatctttttttca 44664688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 44920190 - 44920145
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||| |||||||||||| |||||  ||||||||    
T  44920190 cttaacttaatttcaggcaacaatttggtcctttatctttttttca 44920145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 45171600 - 45171645
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||| ||||||||||||||| |||||  ||||||||    
T  45171600 cttaacttaatttcgggtaacaatttggtcctttatctttttttca 45171645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 46292604 - 46292649
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  46292604 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 46292649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 50710725 - 50710770
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  50710725 cttaacttaatttcaggtaacagtttggtcttttatctttttttca 50710770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 50711287 - 50711242
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  50711287 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 50711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 2773436 - 2773392
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||| |||||  ||||||||    
T  2773436 ttaacttaatttcaggtaacaacttggtcctttatctttttttca 2773392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 29434592 - 29434548
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  29434592 ttaacttaatttcaggtaacagtttggtcctttatctttttttca 29434548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 379
Target Start/End: Original strand, 33278953 - 33278991
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcattta 379  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  33278953 gtctcttaacttaatttcaggtaacaatttggtctttta 33278991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 17495015 - 17494970
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  17495015 cttaacttaatttcaggtaacattttggtcatttatctttttttca 17494970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 26938208 - 26938253
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||    
T  26938208 cttaacttaatttcaggtaacaatttggtcctttatctttttttca 26938253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 30253648 - 30253693
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  30253648 cttaacttaatttcaggtaacagtttggtcatttatctttttttca 30253693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 148300 - 148360
Alignment:
Q  330 ttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||| ||| ||||| ||||||||||||| |||||||||||||||| |||||  ||||||||    
T  148300 ttacacttttggtcccttaacttaattttaggtaacaatttggtcctttatctttttttca 148360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 42685095 - 42685035
Alignment:
Q  330 ttactcttgtggtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||| | ||||||||||||||||| | |||||||||||||| |||||  ||||||||    
T  42685095 ttactcttttagtctcttaacttaattttaagtaacaatttggtcctttatctttttttca 42685035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 8157000 - 8156955
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  8157000 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 8156955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 18805768 - 18805813
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  18805768 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 18805813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 27713056 - 27713011
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  27713056 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 27713011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 28828238 - 28828283
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||| |||||||||||||| |||||  ||||||||    
T  28828238 cttaacttaatttcaagtaacaatttggtcctttatctttttttca 28828283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 29596424 - 29596469
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  29596424 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 29596469  T

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Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 33279230 - 33279185
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  33279230 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 33279185  T

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Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 34632517 - 34632472
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  34632517 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 34632472  T

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Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 36556827 - 36556782
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  36556827 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 36556782  T

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Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 40277240 - 40277289
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||||| | ||||||| |||||  ||||||||    
T  40277240 gtctcttaacttaatttcaggtaatagtttggtcctttatctttttttca 40277289  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 41617332 - 41617287
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  41617332 cttaacttaatttcaggtaacagtttggtcctttatctttttttca 41617287  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 21660748 - 21660792
Alignment:
Q  345 cttaacttaatttcaggtaacaatttggtcatttataattttttc 389  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||    
T  21660748 cttaacttaatttcaggtaacagtttggtcctttatctttttttc 21660792  T

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Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 24419465 - 24419509
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||||||||||| |||||| ||||||||| |||||| ||||||||    
T  24419465 ttaacttaattttaggtaataatttggtcctttatatttttttca 24419509  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 26187419 - 26187375
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  26187419 ttaacttaatttcaggtaacagtttggtcctttatctttttttca 26187375  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 34198858 - 34198902
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| ||||| | |||||||    
T  34198858 ttaacttaatttcaggtaacagtttggtcctttatcaatttttca 34198902  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 36556558 - 36556602
Alignment:
Q  346 ttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  36556558 ttaacttaatttcaggtaacagtttggtcctttatttttttttca 36556602  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 421 - 487
Target Start/End: Complemental strand, 88605 - 88539
Alignment:
Q  421 tcaagcttcaaatctatggtcttttatccatgttttcatatgaatcttatatttaaagcttgaaaat 487  Q
    |||| |||||||| ||| | |||| ||| ||||||||||||||||| ||||||| | ||||||||||    
T  88605 tcaatcttcaaatatataggctttcatctatgttttcatatgaatcatatatttgatgcttgaaaat 88539  T

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Target: scaffold0592 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 8684 - 8635
Alignment:
Q  341 gtctcttaacttaatttcaggtaacaatttggtcatttataattttttca 390  Q
    |||| ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  8684 gtcttttaacttaatttcaggtaacagtttggtcctttatctttttttca 8635  T

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