View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8317_high_7 (Length: 227)

Name: NF8317_high_7
Description: NF8317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8317_high_7
NF8317_high_7
[»] chr1 (78 HSPs)
chr1 (137-227)||(24009574-24009664)
chr1 (138-227)||(30711666-30711755)
chr1 (138-227)||(6367901-6367990)
chr1 (138-227)||(36694282-36694371)
chr1 (138-227)||(36710383-36710472)
chr1 (138-227)||(43759161-43759250)
chr1 (137-227)||(183220-183310)
chr1 (141-227)||(37578195-37578281)
chr1 (141-227)||(40210373-40210459)
chr1 (137-227)||(47999122-47999212)
chr1 (138-227)||(1103800-1103889)
chr1 (138-227)||(17661852-17661940)
chr1 (136-225)||(34850406-34850495)
chr1 (137-227)||(32917599-32917689)
chr1 (141-211)||(40435348-40435418)
chr1 (137-227)||(46899060-46899150)
chr1 (145-227)||(49723065-49723147)
chr1 (138-227)||(7821293-7821381)
chr1 (138-227)||(13914068-13914157)
chr1 (138-227)||(26024731-26024820)
chr1 (138-227)||(46899939-46900028)
chr1 (137-225)||(34849010-34849098)
chr1 (138-224)||(5734010-5734095)
chr1 (139-213)||(13300257-13300331)
chr1 (138-212)||(23209681-23209755)
chr1 (139-212)||(4960541-4960614)
chr1 (139-212)||(35152684-35152757)
chr1 (138-227)||(35473631-35473720)
chr1 (142-227)||(41099072-41099157)
chr1 (143-227)||(4960848-4960932)
chr1 (137-212)||(6367561-6367636)
chr1 (138-189)||(35152343-35152394)
chr1 (138-212)||(19017983-19018057)
chr1 (132-226)||(34464443-34464537)
chr1 (138-212)||(40772813-40772887)
chr1 (139-221)||(48692359-48692441)
chr1 (138-227)||(5735050-5735139)
chr1 (139-212)||(13914421-13914494)
chr1 (138-227)||(19017629-19017718)
chr1 (138-195)||(19515819-19515876)
chr1 (140-205)||(42248475-42248540)
chr1 (138-227)||(48779458-48779547)
chr1 (141-224)||(17692527-17692610)
chr1 (141-212)||(42533027-42533098)
chr1 (141-227)||(1841798-1841883)
chr1 (141-227)||(23209365-23209450)
chr1 (138-212)||(37578546-37578620)
chr1 (137-207)||(40772506-40772576)
chr1 (138-207)||(41098733-41098802)
chr1 (138-226)||(34464789-34464877)
chr1 (137-212)||(14879312-14879387)
chr1 (141-212)||(24009895-24009966)
chr1 (138-189)||(25647884-25647935)
chr1 (138-213)||(51015633-51015708)
chr1 (138-188)||(17662228-17662278)
chr1 (138-224)||(17691219-17691305)
chr1 (138-212)||(26024423-26024497)
chr1 (140-213)||(40439542-40439615)
chr1 (138-227)||(7231588-7231677)
chr1 (138-227)||(19322892-19322981)
chr1 (137-186)||(30711326-30711375)
chr1 (138-207)||(36694607-36694676)
chr1 (138-207)||(36710708-36710777)
chr1 (140-204)||(40210732-40210796)
chr1 (131-207)||(46163023-46163099)
chr1 (138-185)||(6518177-6518224)
chr1 (137-224)||(31197064-31197151)
chr1 (138-189)||(47999469-47999520)
chr1 (138-213)||(51019702-51019777)
chr1 (142-184)||(1103463-1103505)
chr1 (138-208)||(7820954-7821024)
chr1 (138-212)||(183545-183620)
chr1 (160-227)||(48691170-48691237)
chr1 (141-227)||(19323231-19323317)
chr1 (147-188)||(14878980-14879021)
chr1 (161-207)||(26234205-26234251)
chr1 (137-186)||(26234430-26234479)
chr1 (141-213)||(42534369-42534440)
[»] scaffold0031 (2 HSPs)
scaffold0031 (137-227)||(69304-69394)
scaffold0031 (137-212)||(68964-69039)
[»] chr5 (81 HSPs)
chr5 (137-227)||(27587454-27587544)
chr5 (137-227)||(186758-186848)
chr5 (141-227)||(11047776-11047861)
chr5 (141-227)||(43159153-43159239)
chr5 (138-227)||(11762056-11762145)
chr5 (138-227)||(14194423-14194512)
chr5 (140-227)||(35512453-35512540)
chr5 (137-227)||(5024018-5024108)
chr5 (137-227)||(17202738-17202828)
chr5 (138-224)||(42265735-42265821)
chr5 (138-227)||(3528873-3528962)
chr5 (138-227)||(18247415-18247504)
chr5 (138-227)||(20814136-20814224)
chr5 (138-227)||(28269422-28269511)
chr5 (138-227)||(28770869-28770958)
chr5 (138-227)||(39453638-39453727)
chr5 (139-227)||(38442406-38442494)
chr5 (140-227)||(19892310-19892397)
chr5 (141-223)||(21257504-21257586)
chr5 (138-227)||(6150759-6150848)
chr5 (138-227)||(32242581-32242669)
chr5 (143-227)||(8322743-8322827)
chr5 (139-227)||(16156856-16156944)
chr5 (139-227)||(19517946-19518034)
chr5 (141-224)||(11740690-11740773)
chr5 (141-207)||(5024377-5024443)
chr5 (131-225)||(5835767-5835861)
chr5 (138-227)||(6301882-6301969)
chr5 (138-212)||(20814489-20814563)
chr5 (138-227)||(20840776-20840865)
chr5 (138-227)||(29646362-29646451)
chr5 (138-227)||(37991199-37991288)
chr5 (138-227)||(38475033-38475122)
chr5 (139-227)||(35920229-35920317)
chr5 (138-225)||(24547177-24547264)
chr5 (138-227)||(6301546-6301632)
chr5 (134-227)||(10684277-10684369)
chr5 (130-212)||(27587140-27587222)
chr5 (138-207)||(6150454-6150523)
chr5 (139-224)||(11741859-11741944)
chr5 (138-227)||(13963168-13963257)
chr5 (138-227)||(16083282-16083371)
chr5 (140-189)||(19892685-19892734)
chr5 (140-212)||(39453302-39453374)
chr5 (138-189)||(5993889-5993940)
chr5 (138-189)||(16157232-16157283)
chr5 (138-212)||(11761749-11761823)
chr5 (139-189)||(18247087-18247137)
chr5 (138-188)||(20840533-20840583)
chr5 (138-212)||(24547479-24547553)
chr5 (138-227)||(27937055-27937142)
chr5 (144-221)||(5256357-5256433)
chr5 (138-207)||(17202399-17202468)
chr5 (162-227)||(21265167-21265232)
chr5 (137-189)||(3529219-3529271)
chr5 (151-227)||(5994228-5994304)
chr5 (141-205)||(13362589-13362653)
chr5 (138-189)||(18670202-18670253)
chr5 (141-212)||(35512151-35512222)
chr5 (140-227)||(37992627-37992714)
chr5 (138-189)||(38475376-38475427)
chr5 (137-207)||(35920543-35920613)
chr5 (141-186)||(32242245-32242290)
chr5 (137-189)||(28771215-28771267)
chr5 (138-189)||(13962864-13962915)
chr5 (138-188)||(21265520-21265570)
chr5 (145-207)||(38442075-38442137)
chr5 (141-186)||(27937379-27937424)
chr5 (138-225)||(5835623-5835710)
chr5 (138-225)||(24141452-24141539)
chr5 (138-212)||(14194777-14194850)
chr5 (138-184)||(28269762-28269807)
chr5 (138-195)||(186420-186476)
chr5 (140-185)||(16082979-16083024)
chr5 (157-226)||(41930535-41930604)
chr5 (141-213)||(18670503-18670575)
chr5 (141-180)||(31006717-31006756)
chr5 (145-191)||(24204972-24205018)
chr5 (138-168)||(42265890-42265920)
chr5 (138-186)||(11047438-11047487)
chr5 (141-178)||(13362253-13362289)
[»] scaffold0707 (1 HSPs)
scaffold0707 (138-227)||(6418-6507)
[»] chr7 (65 HSPs)
chr7 (138-227)||(10936133-10936222)
chr7 (138-227)||(24389124-24389213)
chr7 (138-227)||(28469010-28469099)
chr7 (138-227)||(48788803-48788892)
chr7 (141-227)||(27992047-27992133)
chr7 (137-227)||(40380023-40380113)
chr7 (138-227)||(6253779-6253868)
chr7 (138-227)||(17102328-17102417)
chr7 (138-226)||(5457247-5457335)
chr7 (137-224)||(42362449-42362536)
chr7 (138-227)||(2640178-2640267)
chr7 (137-226)||(13386087-13386176)
chr7 (138-227)||(27396629-27396718)
chr7 (138-227)||(32298777-32298866)
chr7 (143-212)||(40379774-40379843)
chr7 (139-227)||(42019598-42019686)
chr7 (137-213)||(43123174-43123250)
chr7 (138-212)||(45010958-45011032)
chr7 (137-226)||(18087678-18087767)
chr7 (138-207)||(20426689-20426758)
chr7 (138-209)||(28105501-28105572)
chr7 (137-212)||(42731418-42731493)
chr7 (138-207)||(27396954-27397023)
chr7 (159-227)||(17885649-17885717)
chr7 (138-186)||(29141556-29141604)
chr7 (139-227)||(3914477-3914560)
chr7 (137-212)||(10935793-10935868)
chr7 (138-225)||(17886831-17886918)
chr7 (137-212)||(18670217-18670292)
chr7 (138-189)||(28469385-28469436)
chr7 (137-224)||(33808322-33808409)
chr7 (137-212)||(37657191-37657266)
chr7 (138-212)||(17102020-17102094)
chr7 (139-213)||(34799511-34799585)
chr7 (139-212)||(6253472-6253545)
chr7 (140-205)||(24388821-24388886)
chr7 (138-227)||(32053143-32053232)
chr7 (138-227)||(47945357-47945446)
chr7 (138-227)||(47950787-47950876)
chr7 (138-226)||(42731759-42731847)
chr7 (138-189)||(6571013-6571064)
chr7 (138-213)||(34793904-34793979)
chr7 (139-213)||(1960228-1960302)
chr7 (138-212)||(22871631-22871705)
chr7 (138-191)||(29144357-29144410)
chr7 (139-212)||(32299059-32299132)
chr7 (138-189)||(19204489-19204540)
chr7 (140-227)||(19204797-19204884)
chr7 (141-212)||(37656855-37656926)
chr7 (141-188)||(42019975-42020022)
chr7 (139-189)||(23181371-23181421)
chr7 (138-212)||(27991739-27991813)
chr7 (138-226)||(18086289-18086377)
chr7 (143-225)||(42363727-42363808)
chr7 (139-227)||(47946813-47946901)
chr7 (139-227)||(47952243-47952331)
chr7 (137-187)||(2640557-2640608)
chr7 (165-211)||(5455854-5455900)
chr7 (138-188)||(20425478-20425528)
chr7 (138-195)||(22828189-22828245)
chr7 (147-212)||(28890588-28890653)
chr7 (147-212)||(32068105-32068170)
chr7 (138-207)||(32688577-32688646)
chr7 (157-189)||(16804022-16804054)
chr7 (138-186)||(30127441-30127489)
[»] chr6 (36 HSPs)
chr6 (138-227)||(3059595-3059684)
chr6 (138-227)||(33517873-33517962)
chr6 (138-225)||(8090268-8090355)
chr6 (138-227)||(681067-681156)
chr6 (138-227)||(30726098-30726187)
chr6 (138-227)||(33647290-33647379)
chr6 (138-227)||(679866-679955)
chr6 (140-227)||(11434804-11434891)
chr6 (137-227)||(30337757-30337847)
chr6 (138-227)||(12080975-12081064)
chr6 (138-227)||(13379821-13379910)
chr6 (138-227)||(17734196-17734285)
chr6 (137-225)||(15115338-15115426)
chr6 (137-225)||(15116573-15116661)
chr6 (138-225)||(12408512-12408599)
chr6 (141-227)||(30804200-30804286)
chr6 (138-227)||(21627713-21627802)
chr6 (138-227)||(11393143-11393232)
chr6 (138-227)||(20651010-20651099)
chr6 (138-227)||(20651986-20652075)
chr6 (138-225)||(26463179-26463266)
chr6 (138-212)||(30337449-30337523)
chr6 (138-207)||(21628072-21628141)
chr6 (137-209)||(12407507-12407579)
chr6 (137-207)||(30725759-30725828)
chr6 (141-225)||(22617886-22617971)
chr6 (141-212)||(33517537-33517608)
chr6 (138-224)||(8089443-8089529)
chr6 (140-186)||(12080638-12080684)
chr6 (137-189)||(26464576-26464628)
chr6 (141-182)||(3059260-3059301)
chr6 (141-186)||(30803864-30803909)
chr6 (139-207)||(17734522-17734590)
chr6 (138-213)||(28498378-28498453)
chr6 (138-205)||(29810797-29810864)
chr6 (140-188)||(8418414-8418461)
[»] chr4 (74 HSPs)
chr4 (138-227)||(51692858-51692947)
chr4 (127-227)||(7452142-7452242)
chr4 (138-227)||(10781823-10781912)
chr4 (138-227)||(24349674-24349763)
chr4 (138-227)||(46661253-46661342)
chr4 (137-227)||(18831656-18831746)
chr4 (141-227)||(35028001-35028087)
chr4 (138-227)||(1179139-1179228)
chr4 (138-227)||(10780713-10780802)
chr4 (138-227)||(10974322-10974411)
chr4 (138-227)||(13058321-13058410)
chr4 (138-227)||(34765380-34765469)
chr4 (136-227)||(23613617-23613708)
chr4 (140-227)||(44967071-44967158)
chr4 (137-227)||(147318-147408)
chr4 (138-212)||(1178057-1178130)
chr4 (141-227)||(11108179-11108265)
chr4 (141-227)||(43155532-43155618)
chr4 (138-227)||(24350771-24350860)
chr4 (138-227)||(24411687-24411776)
chr4 (138-227)||(50418668-50418757)
chr4 (138-227)||(52909592-52909681)
chr4 (129-213)||(55866102-55866184)
chr4 (139-227)||(49879208-49879296)
chr4 (137-227)||(14802074-14802164)
chr4 (141-227)||(37248544-37248630)
chr4 (141-227)||(37976156-37976242)
chr4 (138-224)||(39539260-39539346)
chr4 (138-227)||(148094-148183)
chr4 (138-227)||(24711419-24711508)
chr4 (138-227)||(36008844-36008933)
chr4 (139-227)||(15507674-15507762)
chr4 (141-208)||(54086698-54086765)
chr4 (138-224)||(17355925-17356011)
chr4 (138-212)||(44967392-44967466)
chr4 (138-207)||(14801736-14801805)
chr4 (138-215)||(48528485-48528562)
chr4 (138-207)||(51692553-51692622)
chr4 (138-212)||(5368947-5369021)
chr4 (137-227)||(5369206-5369296)
chr4 (138-212)||(24711111-24711185)
chr4 (138-212)||(53129860-53129934)
chr4 (138-212)||(53702153-53702226)
chr4 (138-224)||(55867456-55867542)
chr4 (138-207)||(13058037-13058106)
chr4 (140-208)||(16006151-16006219)
chr4 (129-189)||(50419014-50419074)
chr4 (139-207)||(52909254-52909322)
chr4 (138-189)||(7451834-7451885)
chr4 (140-207)||(15508032-15508098)
chr4 (138-189)||(23613309-23613360)
chr4 (138-224)||(11448071-11448157)
chr4 (138-188)||(34765758-34765808)
chr4 (138-212)||(35028352-35028426)
chr4 (140-205)||(17356283-17356348)
chr4 (138-207)||(18831349-18831418)
chr4 (140-212)||(37248238-37248310)
chr4 (140-207)||(53701814-53701881)
chr4 (138-227)||(53129506-53129595)
chr4 (140-189)||(24411360-24411409)
chr4 (140-189)||(54087072-54087121)
chr4 (138-186)||(37976533-37976581)
chr4 (138-185)||(35508621-35508668)
chr4 (138-213)||(40387467-40387542)
chr4 (138-189)||(43155873-43155924)
chr4 (138-224)||(54435439-54435525)
chr4 (157-227)||(54713649-54713718)
chr4 (138-189)||(36009190-36009242)
chr4 (138-213)||(41583584-41583659)
chr4 (138-169)||(54713616-54713647)
chr4 (157-226)||(9400828-9400897)
chr4 (157-226)||(27934551-27934620)
chr4 (146-183)||(49879559-49879596)
chr4 (144-188)||(11446276-11446320)
[»] chr2 (44 HSPs)
chr2 (138-227)||(16099363-16099452)
chr2 (131-227)||(6658186-6658282)
chr2 (138-227)||(37895347-37895436)
chr2 (141-224)||(6588686-6588769)
chr2 (137-227)||(10713062-10713152)
chr2 (137-226)||(25230101-25230190)
chr2 (138-227)||(36755427-36755516)
chr2 (138-227)||(39498618-39498707)
chr2 (138-227)||(44045341-44045430)
chr2 (142-227)||(44713799-44713884)
chr2 (140-227)||(36480057-36480144)
chr2 (137-227)||(11163053-11163143)
chr2 (149-227)||(13692559-13692637)
chr2 (138-227)||(36382466-36382555)
chr2 (138-227)||(39423854-39423943)
chr2 (138-227)||(45556386-45556475)
chr2 (137-213)||(30729620-30729696)
chr2 (138-224)||(3555250-3555336)
chr2 (137-227)||(21370541-21370631)
chr2 (138-227)||(15848427-15848516)
chr2 (136-227)||(9076406-9076497)
chr2 (138-225)||(25231189-25231276)
chr2 (138-227)||(2318849-2318938)
chr2 (138-227)||(34448134-34448223)
chr2 (138-227)||(44044114-44044203)
chr2 (137-224)||(3556351-3556438)
chr2 (138-212)||(11163377-11163451)
chr2 (138-207)||(15848088-15848157)
chr2 (138-205)||(6657878-6657945)
chr2 (137-212)||(16099054-16099129)
chr2 (137-212)||(22051347-22051422)
chr2 (138-212)||(45556112-45556186)
chr2 (137-189)||(6307095-6307146)
chr2 (140-212)||(10712725-10712797)
chr2 (138-189)||(34447813-34447864)
chr2 (138-189)||(36382161-36382212)
chr2 (139-189)||(2318160-2318209)
chr2 (140-189)||(36479719-36479769)
chr2 (139-188)||(36755094-36755143)
chr2 (141-188)||(37895725-37895772)
chr2 (138-189)||(39423515-39423566)
chr2 (138-225)||(43742017-43742104)
chr2 (138-185)||(44714142-44714188)
chr2 (145-189)||(39498317-39498361)
[»] chr8 (62 HSPs)
chr8 (141-227)||(1425056-1425142)
chr8 (141-227)||(38862902-38862988)
chr8 (140-227)||(40317966-40318053)
chr8 (137-227)||(20385567-20385657)
chr8 (137-227)||(38956011-38956101)
chr8 (138-227)||(8316653-8316742)
chr8 (138-227)||(13186398-13186487)
chr8 (138-226)||(20386770-20386858)
chr8 (137-227)||(34685597-34685686)
chr8 (138-227)||(36928815-36928904)
chr8 (140-224)||(34177312-34177396)
chr8 (138-213)||(33357498-33357573)
chr8 (140-226)||(12272920-12273006)
chr8 (138-227)||(12198950-12199039)
chr8 (138-227)||(12443378-12443467)
chr8 (138-227)||(39071981-39072069)
chr8 (137-213)||(30459370-30459446)
chr8 (137-212)||(31608867-31608942)
chr8 (138-213)||(34060489-34060564)
chr8 (138-213)||(34061681-34061756)
chr8 (138-212)||(8316942-8317016)
chr8 (138-227)||(4994657-4994746)
chr8 (139-224)||(7294103-7294187)
chr8 (138-227)||(23663545-23663634)
chr8 (138-207)||(39071676-39071745)
chr8 (139-227)||(30712056-30712143)
chr8 (139-227)||(30719833-30719920)
chr8 (137-189)||(42803595-42803647)
chr8 (138-213)||(7313358-7313433)
chr8 (137-227)||(23698307-23698398)
chr8 (138-188)||(16388583-16388633)
chr8 (138-212)||(23663868-23663942)
chr8 (137-226)||(4406000-4406089)
chr8 (138-207)||(38955703-38955772)
chr8 (138-189)||(4995033-4995084)
chr8 (141-224)||(7295269-7295352)
chr8 (138-213)||(7306399-7306474)
chr8 (137-188)||(16388904-16388955)
chr8 (148-227)||(22915399-22915478)
chr8 (138-188)||(13186060-13186110)
chr8 (138-212)||(23698598-23698672)
chr8 (138-212)||(40318318-40318392)
chr8 (139-212)||(1425376-1425448)
chr8 (138-211)||(31608527-31608599)
chr8 (142-227)||(36186105-36186190)
chr8 (140-212)||(12199260-12199332)
chr8 (141-189)||(12273230-12273278)
chr8 (140-212)||(12443688-12443760)
chr8 (140-189)||(9065667-9065716)
chr8 (141-224)||(34176448-34176527)
chr8 (137-213)||(2534694-2534770)
chr8 (156-227)||(35756921-35756993)
chr8 (138-182)||(36186448-36186492)
chr8 (137-208)||(5960045-5960116)
chr8 (138-189)||(22915735-22915786)
chr8 (141-227)||(30710859-30710944)
chr8 (138-195)||(9065741-9065798)
chr8 (138-207)||(35756584-35756651)
chr8 (137-182)||(38862617-38862662)
chr8 (137-189)||(2535927-2535979)
chr8 (139-177)||(4405700-4405738)
chr8 (137-207)||(36928478-36928545)
[»] chr3 (51 HSPs)
chr3 (138-227)||(33689382-33689470)
chr3 (137-227)||(36418027-36418117)
chr3 (138-227)||(40758449-40758538)
chr3 (139-227)||(53757062-53757150)
chr3 (147-226)||(23457988-23458067)
chr3 (141-227)||(26463635-26463721)
chr3 (141-227)||(36417691-36417777)
chr3 (141-227)||(46475120-46475205)
chr3 (138-226)||(9367741-9367829)
chr3 (138-226)||(41558008-41558096)
chr3 (138-213)||(53856410-53856485)
chr3 (137-227)||(3850466-3850556)
chr3 (138-212)||(23458333-23458407)
chr3 (137-207)||(40758146-40758216)
chr3 (138-208)||(51993964-51994034)
chr3 (138-227)||(19740923-19741012)
chr3 (139-212)||(35712045-35712118)
chr3 (142-227)||(41558221-41558306)
chr3 (137-189)||(9294335-9294387)
chr3 (138-190)||(26463962-26464014)
chr3 (140-227)||(43384622-43384709)
chr3 (138-188)||(40033834-40033884)
chr3 (138-227)||(3849031-3849120)
chr3 (144-213)||(9368654-9368723)
chr3 (141-226)||(42343071-42343156)
chr3 (137-189)||(34142595-34142647)
chr3 (141-189)||(36150530-36150578)
chr3 (137-213)||(53856014-53856090)
chr3 (138-189)||(19741269-19741320)
chr3 (138-189)||(42342791-42342842)
chr3 (138-212)||(2796179-2796253)
chr3 (138-188)||(33689757-33689807)
chr3 (140-189)||(9292245-9292294)
chr3 (139-204)||(51994248-51994313)
chr3 (141-189)||(46474818-46474866)
chr3 (138-225)||(1079562-1079649)
chr3 (129-204)||(2796459-2796534)
chr3 (141-212)||(55052295-55052366)
chr3 (141-186)||(53756747-53756792)
chr3 (145-212)||(40033526-40033593)
chr3 (158-224)||(42855647-42855713)
chr3 (141-213)||(21783403-21783473)
chr3 (141-213)||(41988587-41988659)
chr3 (139-206)||(23276343-23276410)
chr3 (138-189)||(25107213-25107264)
chr3 (139-169)||(41989583-41989613)
chr3 (138-224)||(52032479-52032565)
chr3 (147-212)||(29686292-29686357)
chr3 (137-189)||(33154876-33154928)
chr3 (141-188)||(40506165-40506213)
chr3 (137-189)||(55052625-55052676)
[»] scaffold0020 (2 HSPs)
scaffold0020 (141-227)||(139980-140066)
scaffold0020 (141-212)||(139675-139746)
[»] scaffold0005 (2 HSPs)
scaffold0005 (137-227)||(37563-37653)
scaffold0005 (138-207)||(37922-37991)
[»] scaffold0075 (2 HSPs)
scaffold0075 (138-227)||(14429-14518)
scaffold0075 (137-189)||(14767-14819)
[»] scaffold0775 (2 HSPs)
scaffold0775 (138-226)||(4962-5050)
scaffold0775 (144-226)||(6318-6400)
[»] scaffold0007 (2 HSPs)
scaffold0007 (138-227)||(2080-2169)
scaffold0007 (138-189)||(1769-1820)
[»] scaffold0295 (1 HSPs)
scaffold0295 (138-212)||(2484-2557)
[»] scaffold0128 (1 HSPs)
scaffold0128 (141-213)||(19860-19932)
[»] scaffold0205 (1 HSPs)
scaffold0205 (157-185)||(21319-21347)


Alignment Details
Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 24009574 - 24009664
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||||||||||    
T  24009574 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgccaactagccttgcaatc 24009664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 30711755 - 30711666
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  30711755 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatc 30711666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 6367990 - 6367901
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  6367990 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 6367901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 36694282 - 36694371
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||| |||||||||    
T  36694282 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatc 36694371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 36710383 - 36710472
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||| |||||||||    
T  36710383 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatc 36710472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 43759250 - 43759161
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||| |||||||||||||| |||||||||||||    
T  43759250 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatc 43759161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 183220 - 183310
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  183220 tggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 37578195 - 37578281
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||||||| |||||    
T  37578195 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatc 37578281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 40210373 - 40210459
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| |||||||||||||| ||| |||||||||    
T  40210373 ttaaatatgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatccttgcaaactagacttgcaatc 40210459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 47999122 - 47999212
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  47999122 tggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 47999212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 1103889 - 1103800
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||| |||||||||||||| ||| |||||||||    
T  1103889 ggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatc 1103800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 17661852 - 17661940
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||| ||||||||    
T  17661852 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc-ctgtattcgctaatccttgcaaactagcattgcaatc 17661940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 34850495 - 34850406
Alignment:
Q  136 gtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| || ||||||||    
T  34850495 gtggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaa 34850406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 32917689 - 32917599
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||  |||||||  ||||||||||||| |||||||||||||    
T  32917689 tggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagccttgcaatc 32917599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 40435348 - 40435418
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgca 211  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtattcgttaatccttgca 40435418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 46899060 - 46899150
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||| ||||| |||||||| |||| ||||||||    
T  46899060 tggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatc 46899150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 49723147 - 49723065
Alignment:
Q  145 atatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||||||| |||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatc 49723065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 7821381 - 7821293
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||    
T  7821381 ggcttaaatatgcatttcatcattgcaattaaaggtcgtttaaaaattggtca-tgtattcgctaatccttgcaaactagccgtgcaatc 7821293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 13914068 - 13914157
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||| ||| |||||||||    
T  13914068 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatc 13914157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 26024820 - 26024731
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||||||||| ||| |||||||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatc 26024731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 46900028 - 46899939
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||| ||||||||  |||| ||||||||||||||| ||||||| ||||| |||||||| |||||||||||||    
T  46900028 ggcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatc 46899939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 34849010 - 34849098
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||||||||  ||||||| |||||||||||||| || ||||||||    
T  34849010 tggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaa 34849098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 5734010 - 5734095
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||| || |||||||||||||| ||| ||||||    
T  5734010 ggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtca-tgtaatcgctaatccttgcaaattagtcttgca 5734095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 13300331 - 13300257
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||  ||||||||||||||||||||||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggtctctgtattcactaatccttgcaaa 13300257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 23209755 - 23209681
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||| ||||    
T  23209755 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaa 23209681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 4960541 - 4960614
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| || |||||||| |||||||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaa 4960614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 35152757 - 35152684
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatccttgcaa 35152684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 35473631 - 35473720
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||| |||||||| ||||    
T  35473631 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaaactagccttgtaatc 35473720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 41099157 - 41099072
Alignment:
Q  142 taaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||| |||||||||||||| || |||| |||||    
T  41099157 taaatatgtatttcatccttacaattagtggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatc 41099072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 4960932 - 4960848
Alignment:
Q  143 aaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||   |||||| |||||||||||||| |||||||||||||    
T  4960932 aaatatgtttttcatactagcaattagaggtcgtttaaaaattggtccccgtattcgctaatccttgcaaactagccttgcaatc 4960848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 6367561 - 6367636
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  6367561 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 6367636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 35152343 - 35152394
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35152343 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 35152394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 19018057 - 19017983
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||||| |||||||| ||||    
T  19018057 ggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaa 19017983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 34464443 - 34464537
Alignment:
Q  132 atttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| || |||||| | ||||  || |||||||||    
T  34464443 atttttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaat 34464537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 40772887 - 40772813
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||| ||||  ||||||| |||||||||||||    
T  40772887 ggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaatccttgcaa 40772813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 48692441 - 48692359
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagcctt 221  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||||| |||||||||||  |||| |||||||| |||||||    
T  48692441 gcttaaatatgtatttgatcattgtaattagaggtcgtttaaaaattgatcattgtattcgttaattcttgcaaattagcctt 48692359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 5735139 - 5735050
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||| |||||||||   ||||||||||||||||   ||||||| |||||||||||||| ||||||| |||||    
T  5735139 ggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatc 5735050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 13914494 - 13914421
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| || |||||||| ||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaa 13914421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 19017629 - 19017718
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||| |   ||||||| ||||||||| |||| ||| |||||||||    
T  19017629 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatttctgtattcgctaatccttacaaactagtcttgcaatc 19017718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 19515819 - 19515876
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgta 195  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  19515819 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgta 19515876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 42248475 - 42248540
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatc 205  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatc 42248540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 48779547 - 48779458
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||| |||  ||||||  |||||||||||||| ||| |||||||||    
T  48779547 ggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatccttgcaaactagtcttgcaatc 48779458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 17692610 - 17692527
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||  |||  || |||||||||||||| |||| |||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgca 17692527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 42533027 - 42533098
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||  |||||||  ||||||||||||    
T  42533027 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatccttgcaa 42533098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 1841883 - 1841798
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||| ||| || |||||||||||||||| ||  ||||||| |||||||||||||| ||| |||||||||    
T  1841883 ttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattgttccctgtattcgctaatccttgcaaactag-cttgcaatc 1841798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 23209365 - 23209450
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |  || |||||  ||||||||||||| |||||||||||||    
T  23209365 ttaaatatgtatttcatccttgcaattag-ggtcgtttaaaaattaatacttatattcgttaatccttgcaaactagccttgcaatc 23209450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 37578620 - 37578546
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| || |||||||| ||||    
T  37578620 ggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaa 37578546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 40772506 - 40772576
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||  |||| || ||||||||    
T  40772506 tggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcct 40772576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 41098733 - 41098802
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||| || ||||||||    
T  41098733 ggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 41098802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 34464877 - 34464789
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||| || |||||| | ||||  || |||||||||    
T  34464877 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaat 34464789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 14879387 - 14879312
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||| ||||||||| |||||||||| | |||||||||||||||||  | ||||| |||||||||||||    
T  14879387 tggcttaaatatatatttcatcattgcaattagggatcgtttaaaaattggtctctatattcgctaatccttgcaa 14879312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 24009966 - 24009895
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||| |||||||||||||||||||||| | ||||||||||||||||||||||| || | |||||| ||||    
T  24009966 ttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaa 24009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 25647884 - 25647935
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  25647884 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 25647935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 51015633 - 51015708
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||| || |||| ||||| ||| ||||||||||||||||||| ||| | |||||||||||||||||    
T  51015633 ggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatccttgcaaa 51015708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 17662278 - 17662228
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  17662278 ggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggt 17662228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 17691219 - 17691305
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||| |||||||||||| ||||| ||| ||| |||||||||||||||||||  |||| || |||||||||||||| ||| ||||||    
T  17691219 ggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgca 17691305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 26024423 - 26024497
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  26024423 ggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaa 26024497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 40439615 - 40439542
Alignment:
Q  140 cttaaatatgtatttcatccttgcaatt-agaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||||||||||||||| |  |||||||||||||||| ||| ||||||| ||||||||||||||    
T  40439615 cttaaatatgtatttcatccttgcaattaatgggtcgtttaaaaattgatca-tgtattcgctaatccttgcaaa 40439542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 7231677 - 7231588
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| ||||||| ||||||  ||||||||||||||| ||| |||||||| ||||| || |||| |||| ||| ||||    
T  7231677 ggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattgatcactgtattcattaatctttacaaactagctttgtaatc 7231588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 19322892 - 19322981
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||  |||||  ||||||||||||||| ||   ||||||| |||||||||||||| || | ||||||||    
T  19322892 ggcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatc 19322981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 30711326 - 30711375
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  30711326 tggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 30711375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 36694676 - 36694607
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||  |||| || ||||||||    
T  36694676 ggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcct 36694607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 36710777 - 36710708
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||  |||| || ||||||||    
T  36710777 ggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcct 36710708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 40210796 - 40210732
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaat 204  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||||| ||||| || |||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcgctaat 40210732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 46163023 - 46163099
Alignment:
Q  131 tatttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||| ||| |||||||||||||||||| ||| |||||| |||||||||||||||||||  |||| || ||||||||    
T  46163023 tatttatggtttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct 46163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 6518224 - 6518177
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaatt 185  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaatt 6518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 31197064 - 31197151
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||||| |||  |||||||  ||||||| | ||| || |||||||    
T  31197064 tggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgca 31197151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 47999520 - 47999469
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  47999520 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtc 47999469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 51019777 - 51019702
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||| || |||| ||||| ||| ||||||||||||||||||| ||| | ||||||||| |||||||    
T  51019777 ggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatctttgcaaa 51019702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 1103463 - 1103505
Alignment:
Q  142 taaatatgtatttcatccttgcaattagaggtcgtttaaaaat 184  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  1103463 taaatatgtatttcatctttgcaattagaggtcgtttaaaaat 1103505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 7820954 - 7821024
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcctt 208  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||| |||  |||| || |||||||||    
T  7820954 ggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatcctt 7821024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 183620 - 183545
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaatta-gaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| ||||||| ||||| | |||||||||||||||||||  |||| || |||||||| ||||    
T  183620 ggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcctagcaa 183545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 48691170 - 48691237
Alignment:
Q  160 ttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||| |||||||||||||||||||  |||||||  |||| |||||||| || ||||||||||    
T  48691170 ttgcaattaggggtcgtttaaaaattggtcgctgtattcgttaattcttgcaaactaaccttgcaatc 48691237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 19323317 - 19323231
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||| |||||  | ||||||||||||| ||   ||||||| |||||||||||||| || | ||||||||    
T  19323317 ttaaatatgtatttcattcttgtaattatggatcgtttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatc 19323231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 14878980 - 14879021
Alignment:
Q  147 atgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  14878980 atgtattttatccttgcaattaggggtcgtttaaaaattggt 14879021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 26234205 - 26234251
Alignment:
Q  161 tgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||| ||| ||||||||||||||||||| ||| |||||||||||||    
T  26234205 tgcaaataggggtcgtttaaaaattggtccttgcattcactaatcct 26234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 26234479 - 26234430
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    |||||||||||||||||| |||| ||||| ||| ||||| ||||||||||    
T  26234479 tggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattg 26234430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 42534440 - 42534369
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||||||  | ||||||| ||||||||||||||| |||  |||||||  ||||| |||||||    
T  42534440 ttaaatatgtatttcatctctacaattag-ggtcgtttaaaaattagtctctgtattcgttaatctttgcaaa 42534369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 69394 - 69304
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  69394 tggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 69304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 68964 - 69039
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||| ||||||||||| ||||    
T  68964 tggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaa 69039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 27587544 - 27587454
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  27587544 tggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatc 27587454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 186848 - 186758
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||  |||||| ||||||| |||||||||||||    
T  186848 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatc 186758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 11047861 - 11047776
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtca-tgtattcactaatccttgcaaactagccttgcaatc 11047776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 43159239 - 43159153
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| |||| |||||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatc 43159153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 11762145 - 11762056
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  11762145 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 11762056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 14194423 - 14194512
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||| |||||||||    
T  14194423 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatc 14194512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 35512540 - 35512453
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| | |||||||||||| |||||||||||||    
T  35512540 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatc 35512453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 5024018 - 5024108
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |   ||||||| |||||||||||||| |||||||||||||    
T  5024018 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatccttgcaaactagccttgcaatc 5024108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 17202828 - 17202738
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||| |||||||||||||| ||| |||||||||    
T  17202828 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatc 17202738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 42265735 - 42265821
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||||||||||    
T  42265735 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgca 42265821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 3528873 - 3528962
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||  |||||||||||||| |||||||||||||    
T  3528873 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatc 3528962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 18247504 - 18247415
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||  ||||||| |||||||||||||| ||| |||||||||    
T  18247504 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggtctctgtattcgctaatccttgcaaactagtcttgcaatc 18247415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 20814136 - 20814224
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||  ||||||||    
T  20814136 ggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggtc-ttgtattcgctaatccttgcaaactagtattgcaatc 20814224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 28269422 - 28269511
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||   |||||| |||||||||||||| |||||||||||||    
T  28269422 ggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatc 28269511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 28770869 - 28770958
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||||||| |||||    
T  28770869 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatc 28770958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 39453727 - 39453638
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||| |||||| ||||||| |||||||||||||    
T  39453727 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatc 39453638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 38442494 - 38442406
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||  ||||||||||||| |||||||||||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaaactagccttgcaatc 38442406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 227
Target Start/End: Original strand, 19892310 - 19892397
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||  ||||||||||||| |||||||| ||||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatc 19892397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 21257586 - 21257504
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgc 223  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||| |||||||||||||| |||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggacactgtattcgctaatccttgcaaactagccttgc 21257504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 6150848 - 6150759
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||  |||||||  ||||| ||||||| |||||||||||||    
T  6150848 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatc 6150759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 32242669 - 32242581
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| |||  ||||||| |||||||||||||| |||||||||||||    
T  32242669 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtc-ctgtattcgctaatccttgcaaactagccttgcaatc 32242581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 8322827 - 8322743
Alignment:
Q  143 aaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||   ||||||  ||||||||||||| |||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatc 8322743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 16156856 - 16156944
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||||||  ||||||||||||| ||| |||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatc 16156944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 19518034 - 19517946
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| |||  ||||||| |||||| ||||||| |||||||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatc 19517946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 11740690 - 11740773
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||  | ||||| |||||||||||||| ||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgca 11740773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 5024443 - 5024377
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcct 5024377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 5835861 - 5835767
Alignment:
Q  131 tatttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    ||||| ||| |||||||||||||||||||||||||||||  || ||||||||||||||   ||||||| |||||||||||||| |||||||||||    
T  5835861 tatttttggtttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaa 5835767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 6301969 - 6301882
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||| ||||||||  ||||||||||||| ||| |||||||||    
T  6301969 ggcttaaatatgtatttcat--ttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaactagtcttgcaatc 6301882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 20814563 - 20814489
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||||||| ||||    
T  20814563 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaa 20814489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 20840865 - 20840776
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| | |||| || |||||||| ||||| ||| |||||||||    
T  20840865 ggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtaactgtaatcgctaatcctagcaaactagtcttgcaatc 20840776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 29646362 - 29646451
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| ||||||| |||||| |||| ||||||||||||||  ||||||| |||||||||||||| ||||||| |||||    
T  29646362 ggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatc 29646451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 37991199 - 37991288
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||| | ||||||| ||||||||| |||||||||||||||||||  |||||||  ||||||||||||| |||||||||||||    
T  37991199 ggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccttgcaatc 37991288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 38475033 - 38475122
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||| | ||||||| ||||| ||||||||||||||  ||||||| |||||||||||||| || ||||||||||    
T  38475033 ggcttaaatatgtatttcatcatagcaattaaaggtcatttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatc 38475122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 35920229 - 35920317
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||| ||| ||  |||||| | |||||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatc 35920317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 225
Target Start/End: Original strand, 24547177 - 24547264
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||||||||  |||| || |||||||||||||| |||||||||||    
T  24547177 ggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaa 24547264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 6301546 - 6301632
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||  |||||||||  ||||||||||||||||||| |||||||| |||||||||||||| ||| |||||||||    
T  6301546 ggcttaaatatgtatttcat--ttgcaattat-ggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagtcttgcaatc 6301632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 10684369 - 10684277
Alignment:
Q  134 ttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcatt--gtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||||||||||   |||  ||||||||||||||||||||| ||| |||||||||    
T  10684369 ttgtggtttaaatatgtatttcatctttgcaattaaaggtcgtttaaaaattg---attccgtattcactaatccttgcaaactagtcttgcaatc 10684277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 27587140 - 27587222
Alignment:
Q  130 atatttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  27587140 atatttttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 27587222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 6150454 - 6150523
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||   |||| |||||||||||    
T  6150454 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcct 6150523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 11741944 - 11741859
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||  ||||||| |||||| ||||||| ||||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgca 11741859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 13963257 - 13963168
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||| ||||||||||||| |||||  |||||||||||||||||||  |||||||  ||||||||||||| ||| |||||||||    
T  13963257 ggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatc 13963168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 16083371 - 16083282
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||||   | ||||| |||||||||||||| ||| |||||||||    
T  16083371 ggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggttcatatattcgctaatccttgcaaactagtcttgcaatc 16083282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 19892734 - 19892685
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 19892685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 39453302 - 39453374
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaa 39453374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 5993889 - 5993940
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5993889 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 5993940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 16157283 - 16157232
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16157283 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 16157232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 11761749 - 11761823
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  11761749 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 11761823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 18247087 - 18247137
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 18247137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 20840533 - 20840583
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20840533 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 20840583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 24547553 - 24547479
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| || || || |||||||| ||||    
T  24547553 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaa 24547479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 27937055 - 27937142
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||  |||  |||||||||  | ||||| |||||||||||||| |||||||||||||    
T  27937055 ggcttaaatatgtatttcatccttgcaattaggggtgattt--aaattggtctctatattcgctaatccttgcaaactagccttgcaatc 27937142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 5256433 - 5256357
Alignment:
Q  144 aatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagcctt 221  Q
    ||||||||| || ||||||||||||| |||||||||||||||||||| |||| | ||||||||||||||| |||||||    
T  5256433 aatatgtatctcgtccttgcaattag-ggtcgtttaaaaattggtcaatgtaatgactaatccttgcaaattagcctt 5256357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 17202399 - 17202468
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||| || ||||||||    
T  17202399 ggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcct 17202468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 21265167 - 21265232
Alignment:
Q  162 gcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||  ||||||  |||||||||||||| |||||||||||||    
T  21265167 gcaattagaggtcgtttaaaaattggtccatgtatttgctaatccttgcaaactagccttgcaatc 21265232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 3529271 - 3529219
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  3529271 tggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 3529219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 5994304 - 5994228
Alignment:
Q  151 atttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||  ||||||||||||||||||   ||||||| |||||||||||||| ||| |||||||||    
T  5994304 atttcatccttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagtcttgcaatc 5994228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 13362653 - 13362589
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatc 205  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || ||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatc 13362589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 18670202 - 18670253
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  18670202 ggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtc 18670253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 35512151 - 35512222
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||  |||| || |||||||| ||||    
T  35512151 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 35512222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 37992714 - 37992627
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| | ||  | ||||  |||||| ||||||| |||||||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaaaatcgatctctctatttgctaatctttgcaaactagccttgcaatc 37992627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 38475427 - 38475376
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  38475427 ggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtc 38475376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 35920613 - 35920543
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||||||  |||| || ||||||||    
T  35920613 tggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 35920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 32242245 - 32242290
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  32242245 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 32242290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 28771267 - 28771215
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  28771267 tggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtc 28771215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 13962864 - 13962915
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  13962864 ggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtc 13962915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 21265570 - 21265520
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  21265570 ggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggt 21265520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 38442075 - 38442137
Alignment:
Q  145 atatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||| |||||||||| |||  |||||||||||||||||||| || ||||||||    
T  38442075 atatgtatttcatcgttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcct 38442137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 27937424 - 27937379
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 225
Target Start/End: Original strand, 5835623 - 5835710
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    ||||||||||||||||||||  ||  |||||| | ||||||||||||||||  ||||||||  ||||| ||||||| || ||||||||    
T  5835623 ggcttaaatatgtatttcatttttttaattagggatcgtttaaaaattggttcttgtattcgttaatctttgcaaattacccttgcaa 5835710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 225
Target Start/End: Original strand, 24141452 - 24141539
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    ||||| ||||||| |||| ||| |||||||||| ||| ||||||||||||||  |||| ||  ||||||| ||||| |||||||||||    
T  24141452 ggctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaa 24141539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 14194850 - 14194777
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||| |||| ||||||||||| |||||| ||||||||||||||||| || |||| | ||||||||| ||||    
T  14194850 ggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattggcca-tgtaattactaatcctggcaa 14194777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 28269807 - 28269762
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaat 184  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28269807 ggcttaaatatgtatttcatc-ttgcaattaggggtcgtttaaaaat 28269762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 186420 - 186476
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgta 195  Q
    ||||||||||| ||||||||| ||| |||||| ||||||||||||||| |||||||||    
T  186420 ggcttaaatatttatttcatc-ttgaaattaggggtcgtttaaaaattagtcattgta 186476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 16082979 - 16083024
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaatt 185  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||||    
T  16082979 cttaaatatgtatttcatccttccaattaggggttgtttaaaaatt 16083024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 41930535 - 41930604
Alignment:
Q  157 tccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||||||||||||||||||||||||||| |||  |||| |  |||||||| ||||  ||||||||||||    
T  41930535 tccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaat 41930604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 18670575 - 18670503
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||| |||||| |||||    |||||||||||||||||  ||||||| | ||||||||||||    
T  18670575 ttaaatatgtatttcttccttgtaattatgaatcgtttaaaaattggtctctgtattcgccaatccttgcaaa 18670503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 31006717 - 31006756
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaa 180  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  31006717 ttaaatatgtatttcatccttataattagaggtcgtttaa 31006756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 24205018 - 24204972
Alignment:
Q  145 atatgtatttcatccttgcaattagaggtcgtttaaaaattggtcat 191  Q
    |||||||||| ||| |||||||||| |||||||||||||||| ||||    
T  24205018 atatgtattttatctttgcaattaggggtcgtttaaaaattgatcat 24204972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Complemental strand, 42265920 - 42265890
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaatta 168  Q
    |||||||||||||||||||||||||||||||    
T  42265920 ggcttaaatatgtatttcatccttgcaatta 42265890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 11047438 - 11047487
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtc-gtttaaaaattg 186  Q
    ||||||||||||||||||| ||||||||||||  ||| ||||||||||||    
T  11047438 ggcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaattg 11047487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 13362253 - 13362289
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgttt 178  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  13362253 ttaaatatgtatttcatccttgcaattag-ggtcgttt 13362289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 6507 - 6418
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  6507 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatc 6418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 10936222 - 10936133
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  10936222 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatc 10936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 24389213 - 24389124
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||| ||||||||    
T  24389213 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcattgcaatc 24389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 28469010 - 28469099
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||    
T  28469010 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaaactagccttgcaatc 28469099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 48788803 - 48788892
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  48788803 ggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 48788892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 27992133 - 27992047
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 27992047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 40380113 - 40380023
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||| | |||||||||||| |||||||||||||    
T  40380113 tggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatc 40380023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 6253868 - 6253779
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||  || |||||||||    
T  6253868 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaacaagtcttgcaatc 6253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 17102417 - 17102328
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||| ||||| |||||||||||||    
T  17102417 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatc 17102328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 5457335 - 5457247
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||| || |||| ||||    
T  5457335 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaat 5457247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 42362449 - 42362536
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||  ||||||||||||| || |||||||    
T  42362449 tggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgca 42362536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 2640178 - 2640267
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||| |||||||||||||| ||| |||||||||    
T  2640178 ggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatc 2640267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 13386176 - 13386087
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||||||  | ||||| |||||||||||||| ||||||||||||    
T  13386176 tggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaat 13386087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 27396629 - 27396718
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||||||  ||||||| |||||||||||||| ||| |||||||||    
T  27396629 ggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaatccttgcaaactagtcttgcaatc 27396718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 32298777 - 32298866
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| |||||  ||||||| |||||||||||||| ||| |||||||||    
T  32298777 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgtattcgctaatccttgcaaactagtcttgcaatc 32298866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 40379774 - 40379843
Alignment:
Q  143 aaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaa 40379843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 42019598 - 42019686
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| |||||||||||||| |||| ||| ||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagctttgtaatc 42019686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 43123174 - 43123250
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  43123174 tggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaa 43123250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 45011032 - 45010958
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||| |||||||||||||    
T  45011032 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaa 45010958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 18087767 - 18087678
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||||| ||||||| |||  ||||||||||||| |||| ||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  18087767 tggctttaatatgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaat 18087678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 20426758 - 20426689
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||    
T  20426758 ggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcct 20426689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 28105501 - 28105572
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttg 209  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||  ||||||||||||||||||    
T  28105501 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgtattcactaatccttg 28105572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 42731418 - 42731493
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| || |||||||| ||||    
T  42731418 tggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaa 42731493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 27397023 - 27396954
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| || ||||||||    
T  27397023 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 27396954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 17885649 - 17885717
Alignment:
Q  159 cttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  17885649 cttgcaattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaaactagccttgcaatc 17885717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 29141604 - 29141556
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29141604 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 3914560 - 3914477
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||    ||||||||||||||||||||| ||||||  ||||||| |||||||||||||| |||||||||||||    
T  3914560 gcttaaatatgtatttcat----gcaattagaggtcgtttaaaa-ttggtccctgtattcgctaatccttgcaaactagccttgcaatc 3914477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 10935793 - 10935868
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  10935793 tggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 10935868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 17886918 - 17886831
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    |||||||||||||||||||||||||||||||| | || ||||||||||| ||  |||||||  ||||||||||||| || ||||||||    
T  17886918 ggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaa 17886831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 18670292 - 18670217
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||| |||||  |||||||  ||||||||||||    
T  18670292 tggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaa 18670217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 28469436 - 28469385
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28469436 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 28469385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 33808322 - 33808409
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||||||||||| |||| |||||   ||||||||||||||||||  ||||||| |||||||||||||| ||| ||||||    
T  33808322 tggcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgca 33808409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 37657266 - 37657191
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||  |||||||  ||||||||||||    
T  37657266 tggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccctgtattcgttaatccttgcaa 37657191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 17102020 - 17102094
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  17102020 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 17102094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 34799585 - 34799511
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||| |||| ||||| ||| ||||||||||||||||||| ||| | |||||||||||||||||    
T  34799585 gcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatccttgcaaa 34799511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 6253472 - 6253545
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 6253545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 24388821 - 24388886
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatc 205  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| ||||||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatc 24388886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 32053143 - 32053232
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||| ||||  | ||| |  ||||||||||||| |||||||||||||    
T  32053143 ggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaatcggtccctatatacgataatccttgcaaactagccttgcaatc 32053232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 47945357 - 47945446
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||| |||||||||||||||| |||||||| | | ||||||||||||||||   ||||||| |||||||||||||| |||| ||||||||    
T  47945357 ggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatc 47945446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 47950787 - 47950876
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||| |||||||||||||||| |||||||| | | ||||||||||||||||   ||||||| |||||||||||||| |||| ||||||||    
T  47950787 ggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatc 47950876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 42731847 - 42731759
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||| ||  | ||| | |||||||||||||  |||| |||||||    
T  42731847 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattgatccctatatccgctaatccttgcaagctagctttgcaat 42731759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 6571013 - 6571064
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  6571013 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 6571064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 34793904 - 34793979
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||||||||| ||| | ||| |||||||||||||    
T  34793904 ggcttaaatatgtattttatccctgcaaataggggtcgtttaaaaattggtccttgcaatcaataatccttgcaaa 34793979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 1960302 - 1960228
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||| |||| ||||| ||| ||||| |||||| |||||| ||| |||||||||||||||||||    
T  1960302 gcttaaatatgtatttgatccctgcaaataggggtcgcttaaaatttggtccttgcattcactaatccttgcaaa 1960228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 22871705 - 22871631
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||||||  |||| |  |||||||||||||    
T  22871705 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaa 22871631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 29144410 - 29144357
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcat 191  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  29144410 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtcat 29144357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 32299132 - 32299059
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||  |||| || |||||||| ||||    
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 32299059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 19204489 - 19204540
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  19204489 ggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtc 19204540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 19204884 - 19204797
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||| |||| |||||| ||||||| ||| ||||||||||||||   |||| || |||||||||||||| |||| ||||||||    
T  19204884 cttaaatatgaatttgatccttacaattaggggtggtttaaaaattggttcatgtaatcgctaatccttgcaaactagctttgcaatc 19204797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 37656855 - 37656926
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||  |||| || |||||||| ||||    
T  37656855 ttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaa 37656926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 42020022 - 42019975
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggt 42019975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 23181421 - 23181371
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtc 23181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 27991739 - 27991813
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||| ||  |||| || |||||||| ||||    
T  27991739 ggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaa 27991813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 18086289 - 18086377
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||| ||||||| |||  |||||||||||||  ||||||||||||||||||  ||||  |  ||||||||||||| ||||||||||||    
T  18086289 ggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttgcaat 18086377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 42363808 - 42363727
Alignment:
Q  143 aaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    |||||| |||||||| ||||||||| || ||||||||||||||||||  |||||||  ||||| ||||||| || ||||||||    
T  42363808 aaatatatatttcattcttgcaatttgacgtcgtttaaaaattggtc-ctgtattcgttaatctttgcaaattatccttgcaa 42363727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 47946901 - 47946813
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||| ||||||| ||||||   |||||||||||| ||||  ||||||| |||  |||| |||| ||| |||||||||    
T  47946901 gcttaaatatgtattttatccttgtaattaggaatcgtttaaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatc 47946813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 47952331 - 47952243
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||| ||||||| ||||||   |||||||||||| ||||  ||||||| |||  |||| |||| ||| |||||||||    
T  47952331 gcttaaatatgtattttatccttgtaattaggaatcgtttaaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatc 47952243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 2640608 - 2640557
Alignment:
Q  137 tggcttaaat-atgtatttcatccttgcaattagaggtcgtttaaaaattgg 187  Q
    |||||||||| |||||||||||||||  |||||| |||||||||||||||||    
T  2640608 tggcttaaattatgtatttcatccttataattaggggtcgtttaaaaattgg 2640557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 5455854 - 5455900
Alignment:
Q  165 attagaggtcgtttaaaaattggtcattgtattcactaatccttgca 211  Q
    ||||| |||||||||||||||||||  ||||||| ||||||||||||    
T  5455854 attaggggtcgtttaaaaattggtccctgtattctctaatccttgca 5455900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 20425478 - 20425528
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||||||||| ||||||| ||||||||| | || |||||||||||||    
T  20425478 ggcttaaatatgtaattcatccctgcaattagggatcatttaaaaattggt 20425528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 22828245 - 22828189
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgta 195  Q
    |||||||| |||| ||||||||||| |||||| |||| |||||||||||||| |||||    
T  22828245 ggcttaaa-atgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgta 22828189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 28890588 - 28890653
Alignment:
Q  147 atgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||| |||| |||||||||||||| ||| |||||||||| ||| ||||| || |||||||| ||||    
T  28890588 atgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaa 28890653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 32068105 - 32068170
Alignment:
Q  147 atgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||| |||| |||||||||||||| ||| |||||||||| ||| ||||| || |||||||| ||||    
T  32068105 atgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaa 32068170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 32688646 - 32688577
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||| ||||||| ||||  |||||||||||| |||| ||||||| |||||| ||||| || ||||||||    
T  32688646 ggctttaatatgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcct 32688577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 16804054 - 16804022
Alignment:
Q  157 tccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||| |||||||||||||||||||    
T  16804054 tccttgcaattaggggtcgtttaaaaattggtc 16804022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 30127441 - 30127489
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    ||||||||||||||||  |||| ||||||||| | ||||||||||||||    
T  30127441 ggcttaaatatgtattcaatccctgcaattagggatcgtttaaaaattg 30127489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 3059684 - 3059595
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  3059684 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 3059595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 33517962 - 33517873
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  33517962 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatc 33517873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 8090355 - 8090268
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  8090355 ggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaa 8090268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 681156 - 681067
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  681156 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatc 681067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 30726187 - 30726098
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||| ||||    
T  30726187 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatc 30726098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 33647379 - 33647290
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| || ||||||||||    
T  33647379 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatc 33647290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 679866 - 679955
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  679866 ggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatc 679955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 227
Target Start/End: Original strand, 11434804 - 11434891
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| |||||| ||||||| |||||||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatc 11434891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 30337847 - 30337757
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||||||||  |||| || |||||||||||||| |||||||||||||    
T  30337847 tggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatc 30337757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 12081064 - 12080975
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| |||  ||||||| |||||||||||||| ||| |||||||||    
T  12081064 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatc 12080975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 13379910 - 13379821
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||  ||||||| ||||| |||||||| |||||||||||||    
T  13379910 ggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatc 13379821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 17734196 - 17734285
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||  ||||| |  |||||||||||||| |||||||||||||    
T  17734196 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatc 17734285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 15115338 - 15115426
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||  | || ||  ||||||||||||| |||||||||||    
T  15115338 tggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaa 15115426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 15116661 - 15116573
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||||||||| | ||| || |||||||||||||| |||||||||||    
T  15116661 tggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaa 15116573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 12408599 - 12408512
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||| |||||| |||||||| |||||||||||||| || ||||||||    
T  12408599 ggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatccttgcaaattatccttgcaa 12408512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 30804286 - 30804200
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||| ||||| |||||||| |||| ||||||||    
T  30804286 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaattcttgcaaactagcgttgcaatc 30804200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 21627713 - 21627802
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||| |||||  | |||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||    
T  21627713 ggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatc 21627802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 11393232 - 11393143
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||| ||||||||||||| ||| |||||| |||||||||||||||||||   |||||| |||||||||||||| ||| |||||||||    
T  11393232 ggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggtccccgtattcgctaatccttgcaaactagacttgcaatc 11393143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 20651010 - 20651099
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||| ||||||||| | ||||||||||||||||   ||||||| ||||||||||||||  ||||||||||||    
T  20651010 ggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatc 20651099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 20652075 - 20651986
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| || | ||||||||  |||||||||||||||| ||  ||||||||||||||||||||||  ||||||||||||    
T  20652075 ggcttaaatatgtatttaattcctgcaattatgggtcgtttaaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatc 20651986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 225
Target Start/End: Original strand, 26463179 - 26463266
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||  |||||||  ||||||| ||||| || ||||||||    
T  26463179 ggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaa 26463266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 30337449 - 30337523
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  30337449 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 30337523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 21628141 - 21628072
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||| || ||||||||    
T  21628141 ggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcct 21628072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 12407507 - 12407579
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttg 209  Q
    ||||||||||||||||||||||||| ||||||  | |||||||||||||||||  ||||||| ||||||||||    
T  12407507 tggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttg 12407579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 30725759 - 30725828
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||| || ||||||||    
T  30725759 tggcttaaatatgtatttcattcttgcaattag-ggtcgtttaaaaattggtctctgtaatcgctaatcct 30725828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 22617886 - 22617971
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaatt-ggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||  || |||| |||||||||||| | || ||||||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgggtctctgcattcgctaatccttgcagactacccttgcaa 22617971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 33517537 - 33517608
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||||  |||| || |||||||| ||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaa 33517608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 8089443 - 8089529
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||| | ||| ||||||||| |||||||||||||||||||  | || ||  ||||||||||||| || |||||||    
T  8089443 ggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgca 8089529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 12080638 - 12080684
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  12080638 cttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattg 12080684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 26464628 - 26464576
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||| |||||    
T  26464628 tggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtc 26464576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 3059260 - 3059301
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaa 182  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  3059260 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 3059301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 30803864 - 30803909
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||    
T  30803864 ttaaatatgtatttcatccttgcaactaggtgtcgtttaaaaattg 30803909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 17734590 - 17734522
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||| |||||| ||||||  |||||||||||||||| ||  |||| || ||||||||    
T  17734590 gcttaaatatgtatttgatccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcct 17734522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 28498453 - 28498378
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||| ||||||| |||| ||| ||||||||| | || |||||||||||||| ||||| || |||||||| |||||    
T  28498453 ggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaa 28498378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 29810864 - 29810797
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatc 205  Q
    ||||| ||||||| |||| ||| ||||||||| | || |||||||||||||| ||||| |||||||||    
T  29810864 ggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcactaatc 29810797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 8418461 - 8418414
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||||||||| |||||||||||||||   ||||||||||||||||    
T  8418461 cttaaatatgtatt-catccttgcaattaggaatcgtttaaaaattggt 8418414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 51692947 - 51692858
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  51692947 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 51692858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 7452242 - 7452142
Alignment:
Q  127 cgtatatttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||    
T  7452242 cgtaaatttttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaat 7452143  T
Q  227 c 227  Q
    |    
T  7452142 c 7452142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 10781912 - 10781823
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  10781912 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatc 10781823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 24349674 - 24349763
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  24349674 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 24349763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 46661342 - 46661253
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||||| ||||| |||||||||||||    
T  46661342 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatc 46661253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 18831746 - 18831656
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||| ||||||| || ||||||||||    
T  18831746 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcattgcaaactaaccttgcaatc 18831656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 35028001 - 35028087
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||| |||||||||||||| |||||||||||||    
T  35028001 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatc 35028087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 1179228 - 1179139
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  1179228 ggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatc 1179139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 10780713 - 10780802
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  || |||| |||||||||||||| |||||||||||||    
T  10780713 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatc 10780802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 10974322 - 10974411
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  || |||| |||||||||||||| |||||||||||||    
T  10974322 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatc 10974411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 13058410 - 13058321
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| ||||||||||| || |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  13058410 ggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 13058321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 34765380 - 34765469
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||| |||| |||||||| |||||||||||||| |||||||||||||    
T  34765380 ggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatc 34765469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 23613708 - 23613617
Alignment:
Q  136 gtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||  ||||||| |||||||||||||| ||| |||||||||    
T  23613708 gtggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatccttgcaaattagtcttgcaatc 23613617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 227
Target Start/End: Original strand, 44967071 - 44967158
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| ||||||||| |||| |||||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttacaaactagccttgcaatc 44967158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 147318 - 147408
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||| |||||||||    
T  147318 tggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatc 147408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 1178057 - 1178130
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  1178057 ggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattggtca-tgtattcgctaatccttgcaa 1178130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 11108265 - 11108179
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| || |||||||| |||||||||||||| ||| |||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccttgtattcgctaatccttgcaaactagtcttgcaatc 11108179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 43155532 - 43155618
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 43155618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 24350860 - 24350771
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  || |||| |||||||||||||| |||| ||||||||    
T  24350860 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatc 24350771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 24411776 - 24411687
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| |||||||||||||| || ||||||||||    
T  24411776 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccctgtattcgctaatccttgcaaactaaccttgcaatc 24411687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 50418668 - 50418757
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| ||  ||||||||||||| |||||||||||||    
T  50418668 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatc 50418757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 52909681 - 52909592
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||  | || ||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  52909681 ggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatc 52909592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 55866102 - 55866184
Alignment:
Q  129 tatatttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  55866102 tatatttttggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt--ttgtattcactaatccttgcaaa 55866184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 49879208 - 49879296
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| |  |||||||||||||| |||||||||||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatc 49879296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 14802164 - 14802074
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| || ||||| ||  |||||||||    
T  14802164 tggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatc 14802074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 37248630 - 37248544
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||||||||| ||| |||||||||    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatc 37248544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 37976156 - 37976242
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||| |||||| ||||||| ||| |||||||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgtattcgctaatctttgcaaactagtcttgcaatc 37976242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 39539346 - 39539260
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| ||  |||| |||||||| ||||||||||    
T  39539346 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgca 39539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 148183 - 148094
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||  | |||||  ||||||||||||| ||| |||||||||    
T  148183 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctttattcgttaatccttgcaaactagtcttgcaatc 148094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 24711508 - 24711419
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||  ||  ||||||||||||| |||||||||||||    
T  24711508 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatc 24711419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 36008844 - 36008933
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| ||||||| |||||| | |||||||||||||||||  ||||||| |||||| ||||||| |||||||||||||    
T  36008844 ggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaatcattgcaaactagccttgcaatc 36008933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 15507674 - 15507762
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||  | ||||| |||||||||||||| ||| | |||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagtcgtgcaatc 15507762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 54086698 - 54086765
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcctt 208  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 54086765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 17355925 - 17356011
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||   ||||||| |||||| ||||||| ||| ||||||    
T  17355925 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgtattcgctaatctttgcaaactagtcttgca 17356011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 44967466 - 44967392
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| || |||||||| ||||    
T  44967466 ggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 44967392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 14801736 - 14801805
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| || ||||||||    
T  14801736 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcct 14801805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 48528485 - 48528562
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaat 215  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||   ||||||||||||||    
T  48528485 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgtcaatccttgcaaaat 48528562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 51692553 - 51692622
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| || ||||||||    
T  51692553 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcct 51692622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 5368947 - 5369021
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||| || |||||||| ||||    
T  5368947 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaa 5369021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 5369296 - 5369206
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| ||||||  || ||| |||||||||||||||||||  || ||||  ||||||||||||| |||||||||||||    
T  5369296 tggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctgcattcgttaatccttgcaaactagccttgcaatc 5369206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 24711111 - 24711185
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  24711111 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 24711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 53129934 - 53129860
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| || | ||| || |||||||||||||    
T  53129934 ggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaa 53129860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 53702226 - 53702153
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||  |||| |||||||    
T  53702226 ggcttaaatatgtatttcatctttgcaattagaggttgtttaaaaattggtca-tgtattcgttaattcttgcaa 53702153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 55867542 - 55867456
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||  |||| ||  ||||||||||||| || |||||||    
T  55867542 ggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgca 55867456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 13058037 - 13058106
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || ||||||||    
T  13058037 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcct 13058106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 16006219 - 16006151
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcctt 208  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||  ||||||| |||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcctt 16006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 50419074 - 50419014
Alignment:
Q  129 tatatttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  50419074 tatattttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 50419014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 52909254 - 52909322
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||| || ||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcct 52909322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 7451834 - 7451885
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  7451834 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 7451885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 15508098 - 15508032
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| || ||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcct 15508032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 23613309 - 23613360
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  23613309 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 23613360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 11448157 - 11448071
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||||| ||| || |||||| |||||||||||||||| ||  |||| || |||||||||||||| || |||||||    
T  11448157 ggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgca 11448071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 34765808 - 34765758
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  34765808 ggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggt 34765758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 35028426 - 35028352
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||||||||  | | ||| |||||||||||||    
T  35028426 ggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaa 35028352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 17356348 - 17356283
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatc 205  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||||||  ||||||| ||||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatc 17356283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 18831349 - 18831418
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||||  |||| || ||||||||    
T  18831349 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 18831418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 37248238 - 37248310
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||| | |||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 37248310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 53701814 - 53701881
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||| ||  |||| || ||||||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcct 53701881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 53129506 - 53129595
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgttt-aaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| ||| |||||||||| | |||||| |||||||||||| ||||||  ||||||||| |||| ||| |||||||||    
T  53129506 ggcttaaatatgtattttatcattgcaattagggatcgtttaaaaaattggtca-tgtatttgctaatccttacaaactagtcttgcaatc 53129595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 24411360 - 24411409
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtc 24411409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 54087121 - 54087072
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  54087121 cttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtc 54087072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 37976581 - 37976533
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    ||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  37976581 ggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattg 37976533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 35508668 - 35508621
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaatt 185  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  35508668 ggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaatt 35508621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 40387467 - 40387542
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||| ||||||| |||||||| ||||||||| || | ||||||||||||||  ||||||| |||||||| |||||    
T  40387467 ggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaa 40387542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 43155924 - 43155873
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| ||||||  |||||| |||||||||||||||||||    
T  43155924 ggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtc 43155873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 54435525 - 54435439
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||||| | |||||||||||  ||||||||||||||| ||  |||| ||   |||||||||||| |||| |||||    
T  54435525 ggcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattgatccatgtaatcgtcaatccttgcaaattagcattgca 54435439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 54713649 - 54713718
Alignment:
Q  157 tccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||| | |||||||||||||||  ||  ||||||| |||||||||||||| |||||||||||||    
T  54713649 tccttgcaattgg-ggtcgtttaaaaattaatctctgtattcgctaatccttgcaaactagccttgcaatc 54713718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 36009242 - 36009190
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaatta-gaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| ||||||| ||||| | |||||||||||||||||||    
T  36009242 ggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtc 36009190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 41583659 - 41583584
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||| ||||||| |||||||| ||||||||| |||| ||||||||||| |   ||||||| |||||||| |||||    
T  41583659 ggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaa 41583584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 169
Target Start/End: Original strand, 54713616 - 54713647
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattag 169  Q
    ||||||||||||||||||||||||||||||||    
T  54713616 ggcttaaatatgtatttcatccttgcaattag 54713647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 9400897 - 9400828
Alignment:
Q  157 tccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||||||||||| ||||||||||||||| |||  |||| |  |||||||| ||||  ||||||||||||    
T  9400897 tccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaat 9400828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 27934551 - 27934620
Alignment:
Q  157 tccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||||||||||| ||||||||||||||| |||  |||| |  |||||||| ||||  ||||||||||||    
T  27934551 tccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaat 27934620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 183
Target Start/End: Complemental strand, 49879596 - 49879559
Alignment:
Q  146 tatgtatttcatccttgcaattagaggtcgtttaaaaa 183  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  49879596 tatgtatttgatccttgcaattaggggtcgtttaaaaa 49879559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 11446276 - 11446320
Alignment:
Q  144 aatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    ||||||| |||| ||| |||||||||||||| |||||||||||||    
T  11446276 aatatgtgtttcgtccctgcaattagaggtcatttaaaaattggt 11446320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 16099452 - 16099363
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  16099452 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatc 16099363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 6658282 - 6658186
Alignment:
Q  131 tatttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||| ||||||| |||||    
T  6658282 tatttttggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatc 6658186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 37895347 - 37895436
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  37895347 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 37895436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 6588686 - 6588769
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgca 6588769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 10713152 - 10713062
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||   ||||||| |||||||||||||| |||||||||||||    
T  10713152 tggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatc 10713062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 25230101 - 25230190
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||    
T  25230101 tggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaat 25230190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 36755516 - 36755427
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  | || || |||||||||||||| |||||||||||||    
T  36755516 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatc 36755427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 39498707 - 39498618
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  39498707 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatc 39498618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 44045430 - 44045341
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  44045430 ggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 44045341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 44713799 - 44713884
Alignment:
Q  142 taaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatc 44713884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 36480144 - 36480057
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||  | ||||| |||||||||||||| |||||||||||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatc 36480057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 11163053 - 11163143
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||  ||||||| |||||||||||||| ||| |||||||||    
T  11163053 tggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatc 11163143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 13692637 - 13692559
Alignment:
Q  149 gtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 13692559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 36382555 - 36382466
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| ||||||| |||||| ||| |||||||||    
T  36382555 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccatgcaaactagtcttgcaatc 36382466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 39423943 - 39423854
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||  | ||||| |||||||||||||| ||| |||||||||    
T  39423943 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagtcttgcaatc 39423854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 45556475 - 45556386
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||||| |||||| ||||||| |||||||||||||    
T  45556475 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaatctttgcaaactagccttgcaatc 45556386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 30729620 - 30729696
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||  | ||||| ||||||||||||||    
T  30729620 tggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaa 30729696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 3555250 - 3555336
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||  || ||||| |||| ||||||||||    
T  3555250 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgca 3555336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 21370631 - 21370541
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||  |||||||  ||||||||||||| |||| ||||||||    
T  21370631 tggcttaaatatgtatttcatccttgtaattataggtcgtttaaaaattgatccatgtattcgttaatccttgcaaactagcattgcaatc 21370541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 15848516 - 15848427
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||   ||||||| ||||||||||| || || ||||||||||    
T  15848516 ggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatc 15848427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 9076497 - 9076406
Alignment:
Q  136 gtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||   ||||||  ||||||||||||| ||| |||||||||    
T  9076497 gtggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggtctccgtattcgttaatccttgcaaactagtcttgcaatc 9076406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 25231276 - 25231189
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||  ||||||| |||||||| ||||| || ||||||||    
T  25231276 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaa 25231189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 2318938 - 2318849
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||| ||| || ||||||| ||| |||||||||    
T  2318938 ggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggttcatgtattcgctattcgttgcaaactagtcttgcaatc 2318849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 34448223 - 34448134
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||||||||  | |||||  ||||||||||||| ||| |||||||||    
T  34448223 ggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtccctatattcgttaatccttgcaaactagtcttgcaatc 34448134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 44044114 - 44044203
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||| ||||||||| ||| |||||||||||||||  |||||||||||||||||| ||| || ||||| ||||    
T  44044114 ggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgtattcactaatccttgaaaactaaccttgtaatc 44044203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 3556438 - 3556351
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||  ||||||||||||||||||  |||||||||||||||||||  |||| ||  ||||||||||||| ||||||||||    
T  3556438 tggcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgca 3556351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 11163451 - 11163377
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  11163451 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 11163377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 15848088 - 15848157
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||  |||| || ||||||||    
T  15848088 ggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 15848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 6657878 - 6657945
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatc 205  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||||||  |||| |||||||||    
T  6657878 ggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatc 6657945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 16099054 - 16099129
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||| || ||||||||||| |||| ||||||||||||||  |||| ||||||||||| ||||    
T  16099054 tggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaa 16099129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 22051422 - 22051347
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||  |||| || |||||||| ||||    
T  22051422 tggcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaa 22051347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 45556112 - 45556186
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||  |||| || |||||||| ||||    
T  45556112 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaa 45556186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 6307146 - 6307095
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  6307146 tggcttaaatatgtatttcatc-ttgcaattagtggtcgtttaaaaattggtc 6307095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 10712725 - 10712797
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||||||| || || ||| ||||||| ||||    
T  10712725 cttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaa 10712797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 34447813 - 34447864
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  34447813 ggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtc 34447864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 36382161 - 36382212
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  36382161 ggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtc 36382212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 2318160 - 2318209
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaattag-ggtagtttaaaaattggtc 2318209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 36479719 - 36479769
Alignment:
Q  140 cttaaatatgtatttcatcctt-gcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtc 36479769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 36755094 - 36755143
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  36755094 gcttaaatatgtatttcatctttataattagaggtcgtttaaaaattggt 36755143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 37895772 - 37895725
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggt 37895725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 39423515 - 39423566
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||| |||||||||||||| |||||  |||||||||||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtc 39423566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 43742104 - 43742017
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    ||||| |||||||||||| ||| ||||||| |||||| ||||||||||||||  |||| ||| |||||||  |||| || ||||||||    
T  43742104 ggcttcaatatgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaa 43742017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 44714188 - 44714142
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaatt 185  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  44714188 ggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaatt 44714142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 39498317 - 39498361
Alignment:
Q  145 atatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtc 39498361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 1425056 - 1425142
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  1425056 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatc 1425142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 38862988 - 38862902
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatc 38862902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 227
Target Start/End: Original strand, 40317966 - 40318053
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||  ||||||| |||||||||||||| |||||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaaactagccttgcaatc 40318053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 20385567 - 20385657
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| ||| |||||||||    
T  20385567 tggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatc 20385657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 38956101 - 38956011
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||| ||| |||||||||||||    
T  38956101 tggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatc 38956011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 8316653 - 8316742
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||  ||||||||||||| |||||||||||||    
T  8316653 ggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatc 8316742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 13186487 - 13186398
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||   ||||||| |||||||||||||| |||||||||||||    
T  13186487 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatc 13186398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 20386858 - 20386770
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||| |||||    
T  20386858 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaat 20386770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 34685686 - 34685597
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||    
T  34685686 tggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggtc-ttgtattcgctaatccttgcaaactagccttacaatc 34685597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 36928904 - 36928815
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||  ||||||  |||||||||||||| |||||||||||||    
T  36928904 ggcttaaatatgtatttcatcgttgcaattagatatcgtttaaaaattggtctatgtatttgctaatccttgcaaactagccttgcaatc 36928815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 34177396 - 34177312
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||||| |||||||||| ||| ||||||||||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgtaaactagccttgca 34177312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 33357498 - 33357573
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||| ||||||||||||||    
T  33357498 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgtattcgctaatccttgcaaa 33357573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 12272920 - 12273006
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||||||  |||| || |||||||||||||| ||||||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaat 12273006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 12198950 - 12199039
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  | || || |||||||||||||| ||| |||||||||    
T  12198950 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatc 12199039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 12443378 - 12443467
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  | || || |||||||||||||| ||| |||||||||    
T  12443378 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatc 12443467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 39072069 - 39071981
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||||||  |||||||  ||||||||||||| |||||||||||||    
T  39072069 ggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgtattc-gtaatccttgcaaactagccttgcaatc 39071981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 30459370 - 30459446
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||| |||  ||||||||||||||||||||||    
T  30459370 tggcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttgcaaa 30459446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 31608942 - 31608867
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||||||||||  ||||||| |||||||||||||    
T  31608942 tggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaa 31608867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 34060489 - 34060564
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||| || ||||||||||||||    
T  34060489 ggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaa 34060564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 34061756 - 34061681
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||    
T  34061756 ggcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaa 34061681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 8317016 - 8316942
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| || |||||||| ||||    
T  8317016 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaa 8316942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 4994657 - 4994746
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||| |||||||||| | | |||||||||||| ||  ||||||| |||||||||| ||| |||||||||||||    
T  4994657 ggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattgatctctgtattcgctaatccttggaaactagccttgcaatc 4994746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 7294103 - 7294187
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||  | ||||| |||||||||| ||| ||||||||||    
T  7294103 gcttaaatatgtatttcatc-ttgcaattagaggtcgtttaaaaattgatctctatattcgctaatccttgtaaactagccttgca 7294187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 23663545 - 23663634
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||  ||||||||| ||| || ||||| ||||    
T  23663545 ggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatc 23663634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 39071676 - 39071745
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| || ||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 39071745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 30712143 - 30712056
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||| |||||||| ||||| || ||||||||||||||||  ||||||  |||||||||||||| |||||||||||||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtc-ctgtatttgctaatccttgcaaactagccttgcaatc 30712056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 30719920 - 30719833
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||| |||||||| ||||| || ||||||||||||||||  ||||||  |||||||||||||| |||||||||||||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtc-ctgtatttgctaatccttgcaaactagccttgcaatc 30719833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 42803647 - 42803595
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42803647 tggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtc 42803595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 7313433 - 7313358
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||||||||| ||| | |||||||||||||||||    
T  7313433 ggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatccttgcaaa 7313358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 23698307 - 23698398
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaatta-gaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||| |||  |||| || ||||| |||||||| |||||||||||||    
T  23698307 tggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatc 23698398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 16388583 - 16388633
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16388583 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 16388633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 23663942 - 23663868
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  23663942 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaa 23663868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 4406089 - 4406000
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||||||||||||||||||||||||| |||||| ||| |||||||||||||||  ||||||   ||||||||||||  || |||||||||    
T  4406089 tggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaat 4406000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 38955703 - 38955772
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||| |||||||||||| | | ||||||||||||||||||||||| || ||||||||    
T  38955703 ggcttaaatatgtatttgatccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcct 38955772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 4995084 - 4995033
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  4995084 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtc 4995033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 7295352 - 7295269
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||||||||| |||||||||||||  | |||||||||||| ||||  ||||||| |||||||||||||| ||| ||||||    
T  7295352 ttaaatatgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgca 7295269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 7306399 - 7306474
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||||||||| ||| | |||||||| ||||||||    
T  7306399 ggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaattcttgcaaa 7306474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 16388955 - 16388904
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  16388955 tggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggt 16388904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 22915399 - 22915478
Alignment:
Q  148 tgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||| || ||||||||||||| || ||||||||||||||  |||| || |||||||||||||| |||||||||||||    
T  22915399 tgtatttgattcttgcaattagagatcatttaaaaattggtccatgtaatcgctaatccttgcaaactagccttgcaatc 22915478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 13186060 - 13186110
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  13186060 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggt 13186110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 23698672 - 23698598
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  23698672 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 23698598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 40318392 - 40318318
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| |||  |||| || |||||||| ||||    
T  40318392 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaa 40318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 1425448 - 1425376
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||||||||  |||| ||||||||||| ||||    
T  1425448 gcttaaatatatatttgatccttgtaattagaggtcgtttaaaaattggtc-ctgtaatcactaatcctggcaa 1425376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 31608527 - 31608599
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgca 211  Q
    |||||||| |||||||||||||||| |||||| | |||||||||||||| ||| ||||||| ||||||||||||    
T  31608527 ggcttaaacatgtatttcatccttgtaattagggatcgtttaaaaattgatca-tgtattcgctaatccttgca 31608599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 36186105 - 36186190
Alignment:
Q  142 taaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| ||| |||||| |||| ||||||| ||||||  ||||||| |||||||||||||| |||  ||||||||    
T  36186105 taaatatgtatttcatctttgtaattaggggtcttttaaaatttggtccctgtattcgctaatccttgcaaactagtattgcaatc 36186190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 12199332 - 12199260
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||| ||||||  ||||||  |||||||||||||||||| ||||| || |||||||||||||    
T  12199332 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatccttgcaa 12199260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 12273278 - 12273230
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||    
T  12273278 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 12273230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 12443760 - 12443688
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||| ||||||  ||||||  |||||||||||||||||| ||||| || |||||||||||||    
T  12443760 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatccttgcaa 12443688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 9065667 - 9065716
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtc 9065716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 34176448 - 34176527
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||   || |||||  ||||||||||||| ||| ||||||    
T  34176448 ttaaatatgtatttcatccttgcaatta-tggtcgtttaaaaattgg---ttatattcgttaatccttgcaaactagtcttgca 34176527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 2534694 - 2534770
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||||||  || ||||||||  ||||||||||||||||||   |||| || ||||||||||||||    
T  2534694 tggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaa 2534770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 35756993 - 35756921
Alignment:
Q  156 atccttgcaattagagg-tcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||| || |||||||||||||||||  |||||||  ||||||||||||| ||| |||||||||    
T  35756993 atccttgcaattagggggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagtcttgcaatc 35756921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 36186492 - 36186448
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaa 182  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  36186492 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 36186448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 5960045 - 5960116
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcctt 208  Q
    ||||||||| ||||||||||||||||||||||| | ||| |||||||||| ||  |||| || |||||||||    
T  5960045 tggcttaaacatgtatttcatccttgcaattagggatcgattaaaaattgctccctgtaatcgctaatcctt 5960116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 22915786 - 22915735
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| |||||||||| ||| | |||||||||||||||||    
T  22915786 ggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtc 22915735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 30710859 - 30710944
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||| ||| |||||||||||||| |||| |||||||||   ||||||| |||||  ||||||| || ||||||||||    
T  30710859 ttaaatatgtatttgatctttgcaattagaggttgttt-aaaattggttcatgtattcgctaatttttgcaaactaaccttgcaatc 30710944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 9065798 - 9065741
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgta 195  Q
    |||||||||||||||| ||||||||||||||| |||  ||||||||||| || |||||    
T  9065798 ggcttaaatatgtattccatccttgcaattaggggttatttaaaaattgatccttgta 9065741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 35756584 - 35756651
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||| | ||||||||| |||| |||||||||||||| || || |||||||||||    
T  35756584 ggcttaaatatgtatttcat-catgcaattaggggtcatttaaaaattggtc-ttataatcactaatcct 35756651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 38862617 - 38862662
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaa 182  Q
    ||||||||||||||||||||||||||||||||  || |||||||||    
T  38862617 tggcttaaatatgtatttcatccttgcaattaagggccgtttaaaa 38862662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 2535979 - 2535927
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||| |||||||||||| ||| ||||||||| |||| ||||||||||||||    
T  2535979 tggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtc 2535927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 4405700 - 4405738
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtt 177  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  4405700 gcttaaatatgtatttcattcttgcaattaggggtcgtt 4405738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 36928478 - 36928545
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    |||||||||||||||||||   ||| ||||||  |||||||||||||||||||  |||| || ||||||||    
T  36928478 tggcttaaatatgtatttc---ctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcct 36928545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 33689382 - 33689470
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||    
T  33689382 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtca-tgtattcgctaattcttgcaaactagccttgcaatc 33689470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 36418117 - 36418027
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||   ||||||| |||||||||||||| |||||||||||||    
T  36418117 tggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatc 36418027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 40758538 - 40758449
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||| |||||||||||||| ||| |||||||||    
T  40758538 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatc 40758449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 53757150 - 53757062
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||| |||||||||||||| || ||||||||||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatc 53757062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 23457988 - 23458067
Alignment:
Q  147 atgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||||||||||||||||||||  |||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaat 23458067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 26463635 - 26463721
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| || ||||||||  ||||||||||||| ||| |||||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatccttgcaaattagtcttgcaatc 26463721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 36417691 - 36417777
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||| |||| ||||||||||| |||||| |||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||    
T  36417691 ttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 36417777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 46475205 - 46475120
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| | | ||||||| |||||||||||||| |||||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattgat-actgtattcgctaatccttgcaaactagccttgcaatc 46475120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 9367741 - 9367829
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||||||||||||||| |||| | ||||||| ||||||||||||| |||||  ||||||| |||||||||||||| ||||||||||||    
T  9367741 ggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaat 9367829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 41558008 - 41558096
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||  |||||||| |||||||||||| | || |||||||||    
T  41558008 ggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttgcacattaaccttgcaat 41558096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 53856485 - 53856410
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||||| |||| ||||| ||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  53856485 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgtattcactaatccttgcaaa 53856410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 3850556 - 3850466
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||  ||||||||| ||| ||||  |||||||    
T  3850556 tggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgataatccttggaaactagctctgcaatc 3850466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 23458407 - 23458333
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||  |||| || |||||||||||||    
T  23458407 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaa 23458333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 40758146 - 40758216
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| || ||||||||    
T  40758146 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct 40758216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 51993964 - 51994034
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcctt 208  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  51993964 ggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctt 51994034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 19740923 - 19741012
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| || | ||||||||| | |||||||||||||||||  |||| || |||||||||||||| |||||||||||||    
T  19740923 ggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatc 19741012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 35712045 - 35712118
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||||||  ||||||| |||||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaatccttgcaa 35712118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 41558306 - 41558221
Alignment:
Q  142 taaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||||||| ||||||||| |||||||||||||||  ||  ||||||| |||||||||||||| ||| |||||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatc 41558221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 9294387 - 9294335
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9294387 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 9294335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 26464014 - 26463962
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtca 190  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26464014 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtca 26463962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 43384709 - 43384622
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||||||||||||   ||||||||||||| |||  | |||||  ||||||||||||| |||||||||||||    
T  43384709 cttaaatatgtatttcatccttgcaattaggaatcgtttaaaaatttgtctctatattcgttaatccttgcaaactagccttgcaatc 43384622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 40033884 - 40033834
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40033884 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40033834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 3849031 - 3849120
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||| | ||||||| |||||||||  ||||||||||||||||||  |||||||  ||||||||||||| ||||| |||||||    
T  3849031 ggcttaaatatgaaattcatccctgcaattaggagtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccctgcaatc 3849120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 9368723 - 9368654
Alignment:
Q  144 aatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||  |||| ||| |||||||||||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaa 9368654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 42343156 - 42343071
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||||||||||||||||||||| |||||  |||||||||||||||| ||  ||||||| |||||| ||||||| ||| ||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaat 42343071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 34142647 - 34142595
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  34142647 tggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 34142595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 36150530 - 36150578
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 36150578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 53856014 - 53856090
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||||| |||| ||||| ||| ||||| ||||||||||||| ||| |||||||||| ||||||||    
T  53856014 tggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgcattcactaattcttgcaaa 53856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 19741320 - 19741269
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  19741320 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 19741269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 42342791 - 42342842
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  42342791 ggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtc 42342842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 2796179 - 2796253
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||||||  |||| || |||||||| ||||    
T  2796179 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaa 2796253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 33689807 - 33689757
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 188  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33689807 ggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggt 33689757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 9292245 - 9292294
Alignment:
Q  140 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggtc 9292294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 51994313 - 51994248
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaat 204  Q
    |||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||| || |||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaat 51994248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 46474818 - 46474866
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggtc 46474866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 1079649 - 1079562
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaa 225  Q
    ||||| ||||||| |||||||| ||||||||| |||| ||||||||||||||  |||| ||  ||||||| ||||| |||||||||||    
T  1079649 ggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaa 1079562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 2796534 - 2796459
Alignment:
Q  129 tatatttgtggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaat 204  Q
    |||||||  |||||||||||||| |||||||||||||||||  || |||||||||||||||  ||||||| |||||    
T  2796534 tatatttaaggcttaaatatgtacttcatccttgcaattaggagttgtttaaaaattggtccatgtattcgctaat 2796459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 55052295 - 55052366
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||| ||||||  |||||| |||||| ||||||||||||  ||||||| |||||||||||||    
T  55052295 ttaaatatgtatttgatccttataattaggggtcgtctaaaaattggtctctgtattcgctaatccttgcaa 55052366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 53756747 - 53756792
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 186  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattg 53756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 40033526 - 40033593
Alignment:
Q  145 atatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||| |||||||||||||||||||  | |||||||||||||| ||  ||||||| |||||||||||||    
T  40033526 atatatatttcatccttgcaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaa 40033593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 42855713 - 42855647
Alignment:
Q  158 ccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    ||||||||||||  ||| |||||||||| |||  ||||||| |||||||||||||| ||||||||||    
T  42855713 ccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgca 42855647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 21783403 - 21783473
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    |||||||||||||||||||||| |||||  ||||||||  ||||||||   ||||||| ||||||||||||||    
T  21783403 ttaaatatgtatttcatccttgtaattaagggtcgttt--aaattggttcctgtattcgctaatccttgcaaa 21783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 41988587 - 41988659
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||| |||||  || ||  |||| ||||||||||||||  ||||||||||||| ||||||||    
T  41988587 ttaaatatgtatttcctccttataaataagggtcatttaaaaattggtccctgtattcactaattcttgcaaa 41988659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 23276410 - 23276343
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcc 206  Q
    |||| ||||||| |||||||| ||||||||| |||| ||||||||||||||  |||| || |||||||    
T  23276410 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcc 23276343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 25107213 - 25107264
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||| ||||| |||||||| ||||||||| |||| ||||||||||||||    
T  25107213 ggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtc 25107264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 41989613 - 41989583
Alignment:
Q  139 gcttaaatatgtatttcatccttgcaattag 169  Q
    |||||||||||||||||||||||||||||||    
T  41989613 gcttaaatatgtatttcatccttgcaattag 41989583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 52032565 - 52032479
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgca 224  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| |||  |||| || |||||||| |||| ||| |||||||    
T  52032565 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgca 52032479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 29686357 - 29686292
Alignment:
Q  147 atgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||| |||| |||||||||||||  ||| ||| |||||| ||||||||| ||||||||||| ||||    
T  29686357 atgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaa 29686292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 33154876 - 33154928
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||| ||||| |||| ||| ||||||||| |||| ||||||||||||||    
T  33154876 tggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtc 33154928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 40506213 - 40506165
Alignment:
Q  141 ttaaatatgtatttcatccttgcaatta-gaggtcgtttaaaaattggt 188  Q
    |||||||||||||||||||||||||||| | |||| ||||||| |||||    
T  40506213 ttaaatatgtatttcatccttgcaattatggggtcatttaaaagttggt 40506165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 55052676 - 55052625
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    |||||||||||||||||| ||||||| |||||| |||  ||||||||||||||    
T  55052676 tggcttaaatatgtatttgatccttgtaattaggggt-ttttaaaaattggtc 55052625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 140066 - 139980
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||||| |||||||||||||| ||| |||||||||||||||  ||||||||||||| |||||||| |||||||||||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtccctgtattcactaattcttgcaaactagccttgcaatc 139980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 139675 - 139746
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||  |||| || |||||||| ||||    
T  139675 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 139746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 37563 - 37653
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| || ||||| ||  |||||||||    
T  37563 tggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatc 37653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 37991 - 37922
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatcct 207  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| || ||||||||    
T  37991 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcct 37922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 14429 - 14518
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||| |||  | ||||| |||||||||||||| |||||||||||||    
T  14429 ggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaattagtctatttattcgctaatccttgcaaactagccttgcaatc 14518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 14819 - 14767
Alignment:
Q  137 tggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  14819 tggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtc 14767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 4962 - 5050
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||| ||  | ||||| |||||||||||||| ||||||||||||    
T  4962 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaat 5050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 6400 - 6318
Alignment:
Q  144 aatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaat 226  Q
    ||||||| |||| |||||| |||||| ||||  ||||||||||||| || || ||  ||||||||||||| || |||||||||    
T  6400 aatatgtgtttcttccttgaaattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaat 6318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 2169 - 2080
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaaatagccttgcaatc 227  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  || | |  |||||| ||||||| || ||||||||||    
T  2169 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgaaattgctaatctttgcaaactatccttgcaatc 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 1769 - 1820
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtc 189  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  1769 ggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtc 1820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 2557 - 2484
Alignment:
Q  138 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaa 212  Q
    |||||||||||||||||||| ||||||||||| | |||||| |||||||||| | ||||| ||||||||||||||    
T  2557 ggcttaaatatgtatttcattcttgcaattagggatcgttttaaaattggtc-tcgtatttactaatccttgcaa 2484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 19860 - 19932
Alignment:
Q  141 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtcattgtattcactaatccttgcaaa 213  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||  |||  || ||||||||||||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaa 19932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 21347 - 21319
Alignment:
Q  157 tccttgcaattagaggtcgtttaaaaatt 185  Q
    |||||||||||||||||||||||||||||    
T  21347 tccttgcaattagaggtcgtttaaaaatt 21319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University