View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8318_high_2 (Length: 522)

Name: NF8318_high_2
Description: NF8318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8318_high_2
NF8318_high_2
[»] chr6 (32 HSPs)
chr6 (243-522)||(28078268-28078547)
chr6 (6-178)||(28078612-28078784)
chr6 (8-94)||(8674808-8674894)
chr6 (8-94)||(8685487-8685573)
chr6 (386-470)||(28038597-28038681)
chr6 (467-522)||(25078630-25078686)
chr6 (467-521)||(19696626-19696681)
chr6 (243-309)||(28038749-28038816)
chr6 (467-522)||(30445710-30445766)
chr6 (20-167)||(26898835-26898982)
chr6 (468-522)||(12186144-12186199)
chr6 (467-522)||(26945330-26945386)
chr6 (467-522)||(28037802-28037858)
chr6 (467-521)||(20526992-20527046)
chr6 (403-465)||(5407677-5407738)
chr6 (403-465)||(5412002-5412063)
chr6 (480-522)||(15530195-15530237)
chr6 (467-522)||(7542455-7542510)
chr6 (480-522)||(3390578-3390621)
chr6 (480-522)||(3629936-3629979)
chr6 (467-521)||(3833462-3833517)
chr6 (480-522)||(9020125-9020168)
chr6 (402-461)||(10456176-10456234)
chr6 (480-522)||(15532753-15532796)
chr6 (480-522)||(15719841-15719884)
chr6 (480-522)||(17012239-17012282)
chr6 (403-470)||(30444903-30444970)
chr6 (480-522)||(32280195-32280238)
chr6 (478-522)||(13039951-13039996)
chr6 (478-522)||(24338519-24338564)
chr6 (467-522)||(12937266-12937321)
chr6 (478-521)||(15346544-15346588)
[»] chr4 (43 HSPs)
chr4 (6-165)||(1326009-1326168)
chr4 (386-470)||(47565926-47566010)
chr4 (386-470)||(36770770-36770854)
chr4 (467-522)||(25357846-25357902)
chr4 (386-465)||(47564074-47564156)
chr4 (16-167)||(24539208-24539359)
chr4 (467-520)||(47150968-47151022)
chr4 (467-522)||(3982249-3982305)
chr4 (386-465)||(16454623-16454705)
chr4 (117-167)||(49748218-49748268)
chr4 (72-168)||(9061519-9061615)
chr4 (467-522)||(12102292-12102348)
chr4 (386-465)||(22801705-22801787)
chr4 (467-522)||(31983600-31983656)
chr4 (467-522)||(54906794-54906849)
chr4 (398-461)||(10114172-10114235)
chr4 (117-168)||(49357935-49357986)
chr4 (403-465)||(12740286-12740347)
chr4 (403-465)||(12748492-12748553)
chr4 (16-161)||(22455082-22455225)
chr4 (466-522)||(9022508-9022566)
chr4 (392-465)||(18535777-18535850)
chr4 (467-522)||(9863912-9863967)
chr4 (398-461)||(12396752-12396818)
chr4 (398-461)||(12401694-12401760)
chr4 (398-465)||(14788366-14788436)
chr4 (467-522)||(16185908-16185963)
chr4 (467-522)||(28453888-28453943)
chr4 (386-465)||(36920466-36920548)
chr4 (480-522)||(8756324-8756367)
chr4 (72-167)||(11653574-11653669)
chr4 (480-522)||(13544177-13544220)
chr4 (480-522)||(18537547-18537590)
chr4 (468-518)||(32274014-32274065)
chr4 (480-522)||(33415560-33415603)
chr4 (480-522)||(38890298-38890341)
chr4 (480-522)||(41997710-41997753)
chr4 (480-522)||(47274944-47274987)
chr4 (21-144)||(54243649-54243772)
chr4 (468-522)||(54928721-54928776)
chr4 (130-167)||(44783709-44783746)
chr4 (398-465)||(24879842-24879912)
chr4 (467-522)||(40999022-40999078)
[»] chr5 (37 HSPs)
chr5 (6-130)||(29379938-29380062)
chr5 (467-522)||(15143617-15143673)
chr5 (467-522)||(17413239-17413295)
chr5 (16-167)||(42691629-42691780)
chr5 (467-522)||(15445339-15445395)
chr5 (386-465)||(27911696-27911778)
chr5 (467-522)||(36208727-36208783)
chr5 (16-167)||(17413502-17413653)
chr5 (21-167)||(19121283-19121429)
chr5 (467-522)||(4897880-4897936)
chr5 (398-465)||(6746629-6746699)
chr5 (480-522)||(42770974-42771017)
chr5 (386-465)||(659282-659365)
chr5 (399-465)||(31466844-31466912)
chr5 (478-522)||(40221684-40221729)
chr5 (467-522)||(2144635-2144691)
chr5 (398-470)||(13295188-13295260)
chr5 (386-465)||(41586940-41587022)
chr5 (386-457)||(13487560-13487630)
chr5 (480-522)||(17818562-17818605)
chr5 (480-522)||(18511284-18511327)
chr5 (468-511)||(25562375-25562418)
chr5 (386-465)||(42426985-42427063)
chr5 (386-464)||(535271-535348)
chr5 (480-521)||(696041-696083)
chr5 (403-465)||(16408853-16408915)
chr5 (480-522)||(16776322-16776364)
chr5 (386-465)||(20504799-20504882)
chr5 (403-465)||(26174333-26174394)
chr5 (467-522)||(35430331-35430387)
chr5 (403-465)||(40381671-40381732)
chr5 (480-520)||(6661260-6661301)
chr5 (478-522)||(9020380-9020425)
chr5 (478-522)||(17073045-17073090)
chr5 (467-522)||(4754305-4754361)
chr5 (467-511)||(10627418-10627462)
chr5 (386-465)||(18510347-18510429)
[»] chr3 (36 HSPs)
chr3 (6-167)||(49453231-49453392)
chr3 (6-134)||(38362731-38362859)
chr3 (16-171)||(49067076-49067231)
chr3 (386-465)||(18097765-18097847)
chr3 (469-522)||(14634512-14634566)
chr3 (16-165)||(48314515-48314664)
chr3 (386-465)||(28100941-28101023)
chr3 (386-465)||(35918831-35918913)
chr3 (72-168)||(51657245-51657341)
chr3 (403-465)||(15824412-15824473)
chr3 (386-470)||(27422204-27422288)
chr3 (397-465)||(37407806-37407873)
chr3 (72-168)||(40823603-40823699)
chr3 (117-168)||(13495988-13496039)
chr3 (399-465)||(43227618-43227687)
chr3 (388-465)||(28138174-28138254)
chr3 (478-522)||(17795400-17795445)
chr3 (478-522)||(19103840-19103885)
chr3 (386-462)||(43422407-43422486)
chr3 (480-522)||(13420256-13420299)
chr3 (480-522)||(25634031-25634074)
chr3 (480-522)||(28102072-28102115)
chr3 (467-521)||(36871373-36871427)
chr3 (467-522)||(42297732-42297790)
chr3 (383-465)||(53916607-53916692)
chr3 (480-522)||(53917734-53917777)
chr3 (403-465)||(5258876-5258937)
chr3 (403-465)||(6718065-6718126)
chr3 (467-500)||(7768702-7768735)
chr3 (467-511)||(15823731-15823776)
chr3 (478-522)||(25635523-25635568)
chr3 (482-522)||(28761499-28761540)
chr3 (481-522)||(31151490-31151530)
chr3 (467-511)||(46966731-46966776)
chr3 (386-465)||(23635007-23635089)
chr3 (131-167)||(30761267-30761303)
[»] chr8 (21 HSPs)
chr8 (20-133)||(25629537-25629650)
chr8 (467-517)||(17847733-17847783)
chr8 (467-522)||(31578350-31578406)
chr8 (467-522)||(16833756-16833812)
chr8 (467-522)||(31035325-31035380)
chr8 (467-522)||(31573798-31573854)
chr8 (16-167)||(34893024-34893175)
chr8 (120-167)||(27853776-27853823)
chr8 (403-465)||(31574502-31574564)
chr8 (467-522)||(6376196-6376251)
chr8 (480-522)||(15956177-15956220)
chr8 (481-522)||(21480723-21480765)
chr8 (481-522)||(21482531-21482573)
chr8 (403-465)||(34255059-34255120)
chr8 (480-520)||(3005706-3005747)
chr8 (16-61)||(24255235-24255280)
chr8 (478-522)||(25952738-25952783)
chr8 (478-522)||(31162427-31162472)
chr8 (467-522)||(33020974-33021031)
chr8 (468-522)||(3896029-3896085)
chr8 (386-438)||(41383971-41384023)
[»] chr1 (41 HSPs)
chr1 (467-522)||(13125532-13125588)
chr1 (387-465)||(25249585-25249665)
chr1 (386-465)||(14098858-14098940)
chr1 (471-522)||(16561622-16561674)
chr1 (467-522)||(26613314-26613370)
chr1 (467-522)||(30738704-30738760)
chr1 (467-522)||(30790475-30790531)
chr1 (387-465)||(28221606-28221683)
chr1 (403-465)||(28221977-28222038)
chr1 (386-465)||(50077727-50077809)
chr1 (480-522)||(6756690-6756733)
chr1 (117-168)||(50290380-50290431)
chr1 (403-465)||(13126339-13126401)
chr1 (386-465)||(31423969-31424050)
chr1 (467-522)||(43104311-43104368)
chr1 (79-167)||(8998809-8998897)
chr1 (386-470)||(19753504-19753588)
chr1 (402-465)||(27337781-27337847)
chr1 (467-522)||(28279417-28279473)
chr1 (117-165)||(39268247-39268295)
chr1 (467-518)||(46783199-46783250)
chr1 (386-465)||(776609-776687)
chr1 (480-522)||(3579690-3579733)
chr1 (480-522)||(8347347-8347390)
chr1 (480-522)||(9241160-9241203)
chr1 (480-522)||(11457549-11457592)
chr1 (386-465)||(13548237-13548315)
chr1 (480-522)||(40134108-40134151)
chr1 (480-522)||(42922394-42922437)
chr1 (480-521)||(50078896-50078938)
chr1 (478-522)||(14183666-14183711)
chr1 (478-522)||(16429119-16429164)
chr1 (478-522)||(17319049-17319094)
chr1 (482-522)||(50076746-50076787)
chr1 (467-522)||(155858-155913)
chr1 (386-465)||(16430211-16430293)
chr1 (402-465)||(20301693-20301759)
chr1 (131-167)||(23085900-23085936)
chr1 (398-438)||(25127082-25127122)
chr1 (467-522)||(27916646-27916703)
chr1 (478-521)||(31490075-31490119)
[»] chr7 (33 HSPs)
chr7 (383-470)||(44011442-44011529)
chr7 (16-167)||(38029580-38029732)
chr7 (467-522)||(6046655-6046710)
chr7 (467-522)||(6332381-6332437)
chr7 (117-167)||(729053-729103)
chr7 (22-168)||(34405053-34405199)
chr7 (16-162)||(36159375-36159521)
chr7 (386-438)||(24749860-24749912)
chr7 (122-170)||(39703880-39703928)
chr7 (468-522)||(11081669-11081726)
chr7 (398-461)||(24815968-24816031)
chr7 (400-465)||(21679346-21679414)
chr7 (117-167)||(40462315-40462365)
chr7 (478-522)||(31435119-31435164)
chr7 (467-522)||(13290547-13290602)
chr7 (386-438)||(38395558-38395610)
chr7 (399-465)||(43807-43876)
chr7 (402-464)||(7470969-7471034)
chr7 (480-522)||(9679233-9679276)
chr7 (72-167)||(16718882-16718977)
chr7 (72-167)||(17693092-17693187)
chr7 (480-522)||(20091617-20091660)
chr7 (480-522)||(20137181-20137224)
chr7 (480-522)||(22393896-22393939)
chr7 (480-522)||(25276315-25276358)
chr7 (480-522)||(26295621-26295664)
chr7 (480-522)||(42331069-42331112)
chr7 (467-497)||(40281475-40281505)
chr7 (403-465)||(48490958-48491019)
chr7 (467-511)||(6067283-6067328)
chr7 (482-522)||(24258639-24258680)
chr7 (403-468)||(26214340-26214405)
chr7 (467-522)||(6049032-6049087)
[»] scaffold0891 (1 HSPs)
scaffold0891 (16-168)||(1258-1410)
[»] chr2 (24 HSPs)
chr2 (467-522)||(15694031-15694087)
chr2 (467-522)||(40699501-40699557)
chr2 (386-465)||(13829087-13829166)
chr2 (467-522)||(27136197-27136253)
chr2 (475-522)||(35107430-35107477)
chr2 (386-470)||(6396470-6396554)
chr2 (467-522)||(13828415-13828471)
chr2 (480-522)||(20146681-20146724)
chr2 (117-167)||(12008479-12008529)
chr2 (480-522)||(17848581-17848623)
chr2 (467-522)||(20589818-20589874)
chr2 (16-168)||(37995313-37995465)
chr2 (480-522)||(6258889-6258932)
chr2 (387-465)||(6263088-6263169)
chr2 (480-522)||(6264221-6264264)
chr2 (480-522)||(17897318-17897361)
chr2 (480-522)||(18800386-18800429)
chr2 (480-522)||(31732849-31732892)
chr2 (398-465)||(31733815-31733882)
chr2 (480-522)||(42923581-42923624)
chr2 (467-522)||(30720685-30720739)
chr2 (482-522)||(45239049-45239090)
chr2 (382-434)||(28569053-28569105)
chr2 (467-522)||(33604049-33604104)
[»] scaffold0008 (1 HSPs)
scaffold0008 (467-522)||(57501-57557)
[»] scaffold0090 (1 HSPs)
scaffold0090 (72-167)||(12588-12683)
[»] scaffold0025 (1 HSPs)
scaffold0025 (399-465)||(70179-70248)
[»] scaffold0133 (1 HSPs)
scaffold0133 (403-461)||(4066-4124)
[»] scaffold0210 (2 HSPs)
scaffold0210 (92-168)||(17760-17836)
scaffold0210 (92-168)||(25652-25728)
[»] scaffold0011 (1 HSPs)
scaffold0011 (386-465)||(35159-35241)
[»] scaffold0005 (1 HSPs)
scaffold0005 (398-465)||(51294-51364)
[»] scaffold0339 (1 HSPs)
scaffold0339 (480-522)||(4169-4212)
[»] scaffold0224 (1 HSPs)
scaffold0224 (480-522)||(15894-15937)
[»] scaffold0131 (1 HSPs)
scaffold0131 (480-522)||(15192-15235)
[»] scaffold0057 (1 HSPs)
scaffold0057 (480-522)||(16723-16766)
[»] scaffold1155 (1 HSPs)
scaffold1155 (118-167)||(68-117)
[»] scaffold0642 (1 HSPs)
scaffold0642 (118-167)||(189-238)
[»] scaffold0345 (1 HSPs)
scaffold0345 (118-167)||(10100-10149)
[»] scaffold0105 (1 HSPs)
scaffold0105 (118-167)||(28831-28880)


Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 243 - 522
Target Start/End: Complemental strand, 28078547 - 28078268
Alignment:
Q  243 gctaacatctcaattttgcatctgtatacatggatccgatcacaaggattgttccacttgggggtctgagaacagagaatttattcccatgtgaagacct 342  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28078547 gctaacatctcaattttgcatccgtatacatggatccgatcacaaggattgttccacttgggggtctgagaacagagaatttattcccatgtgaagacct 28078448  T
Q  343 tgtctctgggcaattaactaaaataaattttatacttttggatggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaa 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28078447 tgtctctgggcaattaactaaaataaattttatacttttggatggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattatcctgaaa 28078348  T
Q  443 gaccaagggtgattggatgcaagtgaattaggtttgaagacttattcttgtaacctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28078347 gaccaagggtgattggatgcaagtgaattaggtttgaagacttattcttgtaacctttgatatctcttttgtaaagttac 28078268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 28078784 - 28078612
Alignment:
Q  6 atggacatcatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttac 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28078784 atggacataatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttac 28078685  T
Q  106 atgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagtaataaataata 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28078684 atgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagtaataaataata 28078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 8674808 - 8674894
Alignment:
Q  8 ggacatcatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaac 94  Q
    |||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  8674808 ggacataatatgatatggtacaataccaatatatatgataattaatattatgaatttaattaaaacaattatgacattcaactaaac 8674894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 8685487 - 8685573
Alignment:
Q  8 ggacatcatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaac 94  Q
    |||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  8685487 ggacataatatgatatggtacaataccaatatatatgataattaatattatgaatttaattaaaacaattatgacattcaactaaac 8685573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 28038681 - 28038597
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtgaat 470  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| |||||||||||||||    
T  28038681 ggaaggcattccggaggttgaagaatgtatagcatgacttgtgggattaccctaaacgaccaagggtgaatggatgcaagtgaat 28038597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 25078686 - 25078630
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25078686 gaattaggtttgaagacttattcttgtaaccctttgatatctcttttgtaaagttac 25078630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 19696626 - 19696681
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagtta 521  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19696626 gaattaggtttgaagacttattcttgtaatcctttgatatctcttttgtaaagtta 19696681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 28038816 - 28038749
Alignment:
Q  243 gctaacatctcaatttt-gcatctgtatacatggatccgatcacaaggattgttccacttgggggtct 309  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  28038816 gctaacatctcaatttttgcatccatatacatggatccgatcacaaggattgttccacttgggcgtct 28038749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 30445710 - 30445766
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  30445710 gaattaggtttgaagactaattcttgtaaccctttgatatctcttttgtaaagttac 30445766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 26898982 - 26898835
Alignment:
Q  20 atatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgctaaa 119  Q
    ||||||||||||||||| | ||||| |  ||||||||||||| |    ||  ||||| ||||||||||  |||||| ||||||||| | | || |  |||    
T  26898982 atatggtacagtaccaacgactatgcttcttaatattatgaaatactatatgacaatcatgacattcatctaaactattttgttacctattaccgtcaaa 26898883  T
Q  120 tattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    |||||||||| |||||||||||| | || |||||||||||||||||||    
T  26898882 tattaccttccatatgacccgtgtggtagcacgggtcgatggtctagt 26898835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 522
Target Start/End: Complemental strand, 12186199 - 12186144
Alignment:
Q  468 aattaggtttgaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  12186199 aattaggtttggagacttattcttgtaactcattgatatctcttttgtaaagttac 12186144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 26945330 - 26945386
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    |||||||||||| ||||||||| ||||||| | ||||||||||||||||||||||||    
T  26945330 gaattaggtttgtagacttatttttgtaactcattgatatctcttttgtaaagttac 26945386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 28037858 - 28037802
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||    
T  28037858 gaattaggtttaaaatcttattcttgtaaccctttgatatctcttttgtaaagttac 28037802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 20526992 - 20527046
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagtta 521  Q
    |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  20526992 gaattaggtttgaagactaattcttgtaaccttttgatatctc-tttgtaaagtta 20527046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 5407738 - 5407677
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | |||||||||| ||||||| | |||||||||||||||| |||||||||    
T  5407738 ttgaagaatgtatggtgtgacttgtgtgattacc-taaaagaccaagggtgatcggatgcaag 5407677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 5412063 - 5412002
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | |||||||||| ||||||| | |||||||||||||||| |||||||||    
T  5412063 ttgaagaatgtatggtgtgacttgtgtgattacc-taaaagaccaagggtgatcggatgcaag 5412002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 15530237 - 15530195
Alignment:
Q  480 agacttattcttgtaacctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  15530237 agacttattcttgtaaccattgatatctcttttgtaacgttac 15530195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 7542510 - 7542455
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| ||| |||||| ||||||||||||| |||||||||||||    
T  7542510 gaattaggtttgaagactaatttttgtaaccctttgatatctc-tttgtaaagttac 7542455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 3390578 - 3390621
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  3390578 agacttattcttgtaacccattgatatctcttttgtaaagttac 3390621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 3629979 - 3629936
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  3629979 agacttattcttgtaacccattgatatctcttttgtaaagttac 3629936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 3833462 - 3833517
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagtta 521  Q
    |||||| ||||||| | | |||||||||||| ||||||||||||||||||||||||    
T  3833462 gaattatgtttgaaaattgattcttgtaaccctttgatatctcttttgtaaagtta 3833517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 9020125 - 9020168
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  9020125 agacttattcttgtaacccattgatatctcttttgtaaagttac 9020168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 10456234 - 10456176
Alignment:
Q  402 gttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatg 461  Q
    |||||||||||||| ||   ||||||||||||||| | ||||||||||||||||||||||    
T  10456234 gttgaagaatgtatggcacaacttgtgggattacc-taaaagaccaagggtgattggatg 10456176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 15532796 - 15532753
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  15532796 agacttattcttgtaacccattgatatctcttttgtaaagttac 15532753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 15719841 - 15719884
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  15719841 agacttattcttgtaacccattgatatctcttttgtaaagttac 15719884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 17012239 - 17012282
Alignment:
Q  480 agacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  17012239 agacttattcttgtaactcattgatatctcttttgtaaagttac 17012282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 30444903 - 30444970
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtgaat 470  Q
    ||||||||||||| || |||||||||||||||||   ||||| |||| || |||||||||| ||||||    
T  30444903 ttgaagaatgtatggcatgacttgtgggattaccaaaaaagaacaagagtaattggatgcaggtgaat 30444970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 32280195 - 32280238
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  32280195 agacttattcttgtaacccattgatatctcttttgtaaagttac 32280238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 13039951 - 13039996
Alignment:
Q  478 gaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| || |||||||||||||||||| |||||    
T  13039951 gaagacttattcttgtaacccattgatatctcttttgtaaggttac 13039996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Complemental strand, 24338564 - 24338519
Alignment:
Q  478 gaagacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||    
T  24338564 gaagacttattcttgtaacccattgatatctcttttgtaaggttac 24338519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 12937321 - 12937266
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||| || |||||||||||| ||| ||||||| |||||||||||||    
T  12937321 gaattaggtttgaaggctaattcttgtaaccatttaatatctc-tttgtaaagttac 12937266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 478 - 521
Target Start/End: Original strand, 15346544 - 15346588
Alignment:
Q  478 gaagacttattcttgtaa-cctttgatatctcttttgtaaagtta 521  Q
    |||||||||||||||||| || ||||||||||| |||||||||||    
T  15346544 gaagacttattcttgtaacccattgatatctctattgtaaagtta 15346588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 1326009 - 1326168
Alignment:
Q  6 atggacatcatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttac 105  Q
    |||| ||| |||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  1326009 atggtcataatatgatatgatatagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacattcaactaaactattttgttac 1326108  T
Q  106 atgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtcta 165  Q
    |||| ||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  1326109 atgttactgtcaaatattaccttcgatatgacgcgtgcgatagcacgggtcgatggtcta 1326168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 47565926 - 47566010
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtgaat 470  Q
    |||||||||| |||||||||||| ||||||||| || |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  47565926 ggaaggcattctggaggttgaaggatgtatagcatggcttgtgggattaccctaaaagaccaatggtgattggatgcaagtgaat 47566010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 36770770 - 36770854
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtgaat 470  Q
    ||||||||||  ||||||||||||||||||| | || |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  36770770 ggaaggcattccggaggttgaagaatgtataacatggcttgtgggattaccctaaaagaccaaggttgattggatgcaagtgaat 36770854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 25357846 - 25357902
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25357846 gaattaagtttgaagacttattcttgtaaccctttgatatctcttttgtaaagttac 25357902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 47564074 - 47564156
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||||||||||||||||||||||||||||  || ||| |||||||||||    |||| |||||||||||||||||||||    
T  47564074 ggaaggcattatggaggttgaagaatgtatagcacgaattgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 47564156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 24539208 - 24539359
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgc 115  Q
    |||| |||||||||||||||| ||||||| |  ||||||||||||| |    ||  || || ||||||||||  |||||| ||||||||| | | || |     
T  24539208 tatgttatggtacagtaccaaagtctatgcttcttaatattatgaaatactatatgacgatcatgacattcatgtaaactattttgttacctattaccgt 24539307  T
Q  116 taaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
     ||||||||||||| |||||||||||||| || ||| |||||||||||||||    
T  24539308 caaatattaccttccatatgacccgtgcgttagcactggtcgatggtctagt 24539359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 467 - 520
Target Start/End: Complemental strand, 47151022 - 47150968
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagtt 520  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  47151022 gaattaggtttgaagacttattcttgtaaccctttgatatctcttttctaaagtt 47150968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 3982305 - 3982249
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  3982305 gaattaagtttgaagactgattcttgtaacactttgatatctcttttgtaaagttac 3982249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 16454623 - 16454705
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||||| ||||||||||||||||||||||  | |||| |||||||||||    |||| |||||||||||||||||||||    
T  16454623 ggaaggcattctggaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 16454705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 49748268 - 49748218
Alignment:
Q  117 aaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  49748268 aaatattaccttccatatgacccgtgcgttagcacgggtcgatggtctagt 49748218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 9061519 - 9061615
Alignment:
Q  72 acaattatgacattcaattaaactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
    ||||| ||||||||||  |||||| ||||||||| | | || | |||||||||| ||| ||||||||  |||| || ||||||||||||||||||||    
T  9061519 acaatcatgacattcatctaaactattttgttacctattaccgttaaatattacattccatatgacctatgcgttagcacgggtcgatggtctagta 9061615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 12102292 - 12102348
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||| |||||||||||||||| ||  |||||||||||||||||||||||    
T  12102292 gaattaggtttggagacttattcttgtaacccactgatatctcttttgtaaagttac 12102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 22801787 - 22801705
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||  |||||||||||||||||||||  | |||| |||||||||||    |||| |||||||||||||||||||||    
T  22801787 ggaaggcattccggaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 22801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 31983656 - 31983600
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||    
T  31983656 gaattaggtttgaagacttatttttgtaaccctttgatatcttttttgtaaaattac 31983600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 54906794 - 54906849
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||    
T  54906794 gaattaggtttgaagactgattcttgtaactctttgatatctc-tttgtaaagttac 54906849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 10114172 - 10114235
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatg 461  Q
    |||| ||||||||||||| || || ||||||||||| |||| ||| ||||||||||||||||||    
T  10114172 ggagtttgaagaatgtatggcatggcttgtgggattgccctaaaataccaagggtgattggatg 10114235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 49357935 - 49357986
Alignment:
Q  117 aaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
    ||||||||||||| |||||||| ||||| || ||||||||||||||||||||    
T  49357935 aaatattaccttccatatgaccagtgcgttagcacgggtcgatggtctagta 49357986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 12740347 - 12740286
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | ||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  12740347 ttgaagaatgtatggtgtggcttgtgtgattacc-taaaagaccaagggtgattggatgcaag 12740286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 12748553 - 12748492
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | ||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  12748553 ttgaagaatgtatggtgtggcttgtgtgattacc-taaaagaccaagggtgattggatgcaag 12748492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 22455082 - 22455225
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgc 115  Q
    |||| |||||||||||||||| ||||||| |  ||||| ||||||| |    ||  |||||||||||||||| ||||||| |||| |||| | | || |     
T  22455082 tatgttatggtacagtaccaacgtctatgcttcttaatgttatgaaatactatatgacaattatgacattcatttaaactattttattacttattaccgt 22455181  T
Q  116 taaatattaccttcgatatgacccgtgcgatatcacgggtcgatgg 161  Q
     ||||||||||||| ||||||||| |||| ||  ||||||||||||    
T  22455182 caaatattaccttccatatgacccatgcgtta--acgggtcgatgg 22455225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 9022508 - 9022566
Alignment:
Q  466 tgaattaggtttgaagacttattcttgtaacct---ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||| |||||||||||||   |||||||||| |||||||||||||    
T  9022508 tgaattaggtttgaagactaattcttgtaacctctattgatatctc-tttgtaaagttac 9022566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 465
Target Start/End: Complemental strand, 18535850 - 18535777
Alignment:
Q  392 cattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    |||| |||||||| ||||||||||| |  |||||| ||||||||| | |||  |||||||||||||||||||||    
T  18535850 cattctggaggttaaagaatgtatatcacgacttgcgggattaccttaaaaagccaagggtgattggatgcaag 18535777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 9863912 - 9863967
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  9863912 gaattaagtttgaagactaattcttgtaaccttttgatatctc-tttgtaaagttac 9863967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 461
Target Start/End: Complemental strand, 12396818 - 12396752
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatg 461  Q
    |||||||||||||||||||||  |||||| |||||||||||    |||| |||||||||||||||||    
T  12396818 ggaggttgaagaatgtatagcacgacttgcgggattaccctaaaaaaaggccaagggtgattggatg 12396752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 461
Target Start/End: Complemental strand, 12401760 - 12401694
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatg 461  Q
    |||||||||||||||||||||  |||||| |||||||||||    |||| |||||||||||||||||    
T  12401760 ggaggttgaagaatgtatagcacgacttgcgggattaccctaaaaaaaggccaagggtgattggatg 12401694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 14788436 - 14788366
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||||||||||||||||  | |||| |||||||||||    |||| |||||||||||||||||||||    
T  14788436 ggaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 14788366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 16185963 - 16185908
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||||||||||| || |||||||||| || |||||||||||||    
T  16185963 gaattaggtttgaagacttattcttgcaaccctttgatatatc-tttgtaaagttac 16185908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 28453888 - 28453943
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaaccttt-gatatctcttttgtaaagttac 522  Q
    |||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||    
T  28453888 gaattaggtt-gaagactaattcttgtaaacttttgatatctcttttgtaaagttac 28453943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 36920548 - 36920466
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||  |||||||||||||||||||||    |||| |||||||||||    |||| |||||||||||||||||||||    
T  36920548 ggaaggcattccggaggttgaagaatgtatagcacagcttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 36920466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 8756367 - 8756324
Alignment:
Q  480 agacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  8756367 agacttattcttgtaactcattgatatctcttttgtaaagttac 8756324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 11653669 - 11653574
Alignment:
Q  72 acaattatgacattcaattaaactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||| ||||||||||  |||||| |||| |||| | | || |  ||||||||||||| |||||||||||||  || |||||||||||| ||||||    
T  11653669 acaatcatgacattcatctaaactattttattacctattaccgtcaaatattaccttccatatgacccgtgcattagcacgggtcgatgatctagt 11653574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 13544177 - 13544220
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  13544177 agacttattcttgtaacccattgatatctcttttgtaaagttac 13544220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 18537590 - 18537547
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  18537590 agacttattcttgtaacccattgatatctcttttgtaaagttac 18537547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 518
Target Start/End: Complemental strand, 32274065 - 32274014
Alignment:
Q  468 aattaggtttgaagacttattcttgtaac-ctttgatatctcttttgtaaag 518  Q
    |||||||||| |||||| ||||||||||| |||| |||||||||||||||||    
T  32274065 aattaggtttaaagactaattcttgtaactctttcatatctcttttgtaaag 32274014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 33415603 - 33415560
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  33415603 agacttattcttgtaacccattgatatctcttttgtaaagttac 33415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 38890341 - 38890298
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  38890341 agacttattcttgtaacccattgatatctcttttgtaaagttac 38890298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 41997710 - 41997753
Alignment:
Q  480 agacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  41997710 agacttattcttgtaaccctttaatatctcttttgtaaagttac 41997753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 47274944 - 47274987
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  47274944 agacttattcttgtaacccattgatatctcttttgtaaagttac 47274987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 54243649 - 54243772
Alignment:
Q  21 tatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgctaaat 120  Q
    |||||||||||||||| ||||||| |  ||||||||||||| |    || |||||| |||||||| | ||||||| ||||||||| | | |  |  ||||    
T  54243649 tatggtacagtaccaacgtctatgcttcttaatattatgaaatactatataacaatcatgacatttatttaaactattttgttacctattatcgtcaaat 54243748  T
Q  121 attaccttcgatatgacccgtgcg 144  Q
    |||| |||| ||||||||||||||    
T  54243749 attaacttccatatgacccgtgcg 54243772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 522
Target Start/End: Complemental strand, 54928776 - 54928721
Alignment:
Q  468 aattaggtttgaagacttattcttgtaacctttga-tatctcttttgtaaagttac 522  Q
    ||||| ||||||||||| ||||||||||| ||| | ||||||||||||||||||||    
T  54928776 aattaagtttgaagactgattcttgtaacattttaatatctcttttgtaaagttac 54928721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 44783746 - 44783709
Alignment:
Q  130 gatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  44783746 gataagacccgtgcgatagcacgggtcgatggtctagt 44783709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 24879842 - 24879912
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||||||||||||||||  | |||| ||||||||| |    |||| |||||||||||||||||||||    
T  24879842 ggaggttgaagaatgtatagcacggcttgcgggattaccgtaaaaaaaggccaagggtgattggatgcaag 24879912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 40999078 - 40999022
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||| |||||   | |||||||| |||||||||||||||||||||||||    
T  40999078 gaattaggtttggagactgtgttttgtaaccctttgatatctcttttgtaaagttac 40999022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 8e-50; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 29379938 - 29380062
Alignment:
Q  6 atggacatcatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttac 105  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  29379938 atggacataatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaactaaactattttgttac 29380037  T
Q  106 atgtcactgctaaatattaccttcg 130  Q
    |||| ||||| ||||||||| ||||    
T  29380038 atgttactgccaaatattactttcg 29380062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 15143617 - 15143673
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15143617 gaattaggtttgaagacttattcttgtaaccctttgatatctcttttgtaaagttac 15143673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 17413295 - 17413239
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  17413295 gaattaggtttgaaaacttattcttgtaaccctttgatatctcttttgtaaagttac 17413239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 42691780 - 42691629
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgc 115  Q
    |||| |||||||||||||||| ||||||| |  ||||||||||||| |    ||  ||||| ||||||||||  |||||| |||||||| || ||||       
T  42691780 tatgttatggtacagtaccaacgtctatgtttcttaatattatgaaatactatatgacaatcatgacattcatctaaactattttgttagatatcaccat 42691681  T
Q  116 taaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
     ||||||||||||| ||||||| |||||| || ||| |||||||||||||||    
T  42691680 caaatattaccttccatatgactcgtgcgttagcacaggtcgatggtctagt 42691629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 15445395 - 15445339
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  15445395 gaattaggtttgaagaatgattcttgtaaccctttgatatctcttttgtaaagttac 15445339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 27911696 - 27911778
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||||| ||||||||||||||||||||||  | |||| |||||||||||    |||| |||||||||||||||||||||    
T  27911696 ggaaggcattctggaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 27911778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 36208727 - 36208783
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  36208727 gaattaggtttgtagacttattcttgtaacccattgatatctcttttgtaaagttac 36208783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 17413653 - 17413502
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgc 115  Q
    |||| |||||||||||||||| ||||||| |  ||||||||||||| |    ||  ||||| ||||||||||  |||||| ||||||||| | | || |     
T  17413653 tatgttatggtacagtaccaacgtctatgcttcttaatattatgaaatactatatgacaatcatgacattcatctaaactattttgttacctattaccgt 17413554  T
Q  116 taaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
     ||||||||||||| |||||| |||||| |   |||||||||||||||||||    
T  17413553 caaatattaccttccatatgatccgtgctaacacacgggtcgatggtctagt 17413502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 19121429 - 19121283
Alignment:
Q  21 tatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgctaaat 120  Q
    |||||||||||||||| || |||| |  ||||||||||||| |    ||  ||||  ||||||||||  |||||| ||||||||| | | || |  ||||    
T  19121429 tatggtacagtaccaacgtttatgtttcttaatattatgaaatactatatgacaaacatgacattcatctaaactattttgttacctattaccgtgaaat 19121330  T
Q  121 attaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||||||| |||||||| ||||| || |||||||||||||||||||    
T  19121329 attaccttccatatgaccagtgcgttagcacgggtcgatggtctagt 19121283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 4897880 - 4897936
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||||    
T  4897880 gaattaggcttgaagactgattcttgtaaccatttgatatctctattgtaaagttac 4897936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 6746629 - 6746699
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccctga---aagaccaagggtgattggatgcaag 465  Q
    |||||||||||||||||||||  | |||| ||||||||||| |   |||||||||||||||||||||||||    
T  6746629 ggaggttgaagaatgtatagcacggcttgcgggattaccctaaaagaagaccaagggtgattggatgcaag 6746699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 42770974 - 42771017
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  42770974 agacttattcttgtaacctattgatatctcttttgtaaagttac 42771017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 659282 - 659365
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct----gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||  |||||||||||||||||||||  | |||| |||||||||||     |||| |||||||||||||||||||||    
T  659282 ggaaggcatttcggaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaaaggccaagggtgattggatgcaag 659365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 31466912 - 31466844
Alignment:
Q  399 gaggttgaagaatgtatagcgtgacttgtgggattaccct--gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||||||||||  | |||| |||||||||||   |||| |||||||||||||||||||||    
T  31466912 gaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaggccaagggtgattggatgcaag 31466844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 40221684 - 40221729
Alignment:
Q  478 gaagacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  40221684 gaagacttattcttgtaacccattgatatctcttttgtaaagttac 40221729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 2144691 - 2144635
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacctttgatatctct-tttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||||||||  ||| ||| |||||||||||||    
T  2144691 gaattaggtttgaagactaattcttgtaaccttttttatatctctttgtaaagttac 2144635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 13295188 - 13295260
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtgaat 470  Q
    |||| ||||| ||||||| || |||||| |||||||||||  ||||||||| ||| |||||| ||||||||||    
T  13295188 ggagtttgaaaaatgtatggcatgacttttgggattacccgaaaagaccaaaggtaattggaggcaagtgaat 13295260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 41587022 - 41586940
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaa---agaccaagggtgattggatgcaag 465  Q
    ||||||||||  ||||||||||||||||| |||  | ||||||||||||| || ||   || |||||||||||||||||||||    
T  41587022 ggaaggcattccggaggttgaagaatgtacagcacggcttgtgggattactctaaaaagaggccaagggtgattggatgcaag 41586940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 457
Target Start/End: Original strand, 13487560 - 13487630
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattg 457  Q
    ||||||||||  || | ||||||||||||| | |||||||||| ||||| ||| ||||||||||||||||||    
T  13487560 ggaaggcattccggggtttgaagaatgtatggtgtgacttgtgtgatta-cctaaaagaccaagggtgattg 13487630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 17818605 - 17818562
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  17818605 agacttattcttgtaacccattgatatctcttttgtaaagttac 17818562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 18511327 - 18511284
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  18511327 agacttattcttgtaacccgttgatatctcttttgtaaagttac 18511284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Complemental strand, 25562418 - 25562375
Alignment:
Q  468 aattaggtttgaagacttattcttgtaacctttgatatctcttt 511  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||    
T  25562418 aattaggtttgaagactaattcttgtaaccttcaatatctcttt 25562375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 42427063 - 42426985
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    |||||||||| ||| | ||||||||| |||   ||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  42427063 ggaaggcattctggggtttgaagaatatatgatgtggcttgtgtgattacc-taaaagaccaagggtgattggatgcaag 42426985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 464
Target Start/End: Original strand, 535271 - 535348
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaa 464  Q
    ||||||||||  || | ||||||||||||| | ||| |||||| ||||||| | ||||||||||||||||| |||||||    
T  535271 ggaaggcattccggggtttgaagaatgtatggtgtggcttgtgtgattacc-taaaagaccaagggtgattagatgcaa 535348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 521
Target Start/End: Original strand, 696041 - 696083
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagtta 521  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  696041 agacttattcttgtaacccattgatatctcttttgtaaagtta 696083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 465
Target Start/End: Original strand, 16408853 - 16408915
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | ||| |||||| |||||||   |||||||||||||||| |||||||||    
T  16408853 ttgaagaatgtatggtgtggcttgtgtgattacctaaaaagaccaagggtgatcggatgcaag 16408915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 16776322 - 16776364
Alignment:
Q  480 agacttattcttgtaacctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| ||||| |||||||||||| |||||    
T  16776322 agacttattcttgtaaccattgatttctcttttgtaacgttac 16776364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 20504882 - 20504799
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaaga----ccaagggtgattggatgcaag 465  Q
    ||||||||||| |||||||||||||||||||||  | |||  ||||||||||| ||| |    ||||||| |||||||||||||    
T  20504882 ggaaggcattacggaggttgaagaatgtatagcacggcttacgggattacccttaaaaaaatgccaagggggattggatgcaag 20504799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 465
Target Start/End: Original strand, 26174333 - 26174394
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | ||| |||||| ||||||| | |||||||||||||||| |||||||||    
T  26174333 ttgaagaatgtatggtgtggcttgtgtgattacc-taaaagaccaagggtgatcggatgcaag 26174394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 35430331 - 35430387
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa--cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| ||||||||||  | ||||||||||| |||||||||||||    
T  35430331 gaattaggtttgaagactgattcttgtaattcttttgatatctc-tttgtaaagttac 35430387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 465
Target Start/End: Original strand, 40381671 - 40381732
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | |||||||||| |||| || | |||||||||||||||| |||||||||    
T  40381671 ttgaagaatgtatggggtgacttgtgtgattgcc-taaaagaccaagggtgatcggatgcaag 40381732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 520
Target Start/End: Complemental strand, 6661301 - 6661260
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagtt 520  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  6661301 agacttattcttgtaacccattgatatctcttttgtaaagtt 6661260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 9020380 - 9020425
Alignment:
Q  478 gaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||    
T  9020380 gaagacttattcttgtaacccattgatatctcttttgtaaaattac 9020425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 17073045 - 17073090
Alignment:
Q  478 gaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||    
T  17073045 gaagacttattcttgtaactcattgatatctcttttgtaaggttac 17073090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 4754305 - 4754361
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacctttgatatctct-tttgtaaagttac 522  Q
    ||||||||||||||| || |||||||||||||||  ||| ||| |||||||||||||    
T  4754305 gaattaggtttgaaggctaattcttgtaaccttttttatatctctttgtaaagttac 4754361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 10627418 - 10627462
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacctttgatatctcttt 511  Q
    |||||||||||||||||| |||||||||||| |  ||||||||||    
T  10627418 gaattaggtttgaagactgattcttgtaaccctgaatatctcttt 10627462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 18510429 - 18510347
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||  ||||||| |||||||||||||  | |||| |||||||||||    |||| ||||||||||||||| |||||    
T  18510429 ggaaggcattccggaggttaaagaatgtatagcacggcttgcgggattaccctaaaaaaaggccaagggtgattggaggcaag 18510347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 6 - 167
Target Start/End: Complemental strand, 49453392 - 49453231
Alignment:
Q  6 atggacatcatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttac 105  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||| |||    
T  49453392 atggacataatatgatatgatacaataccaatgtctatgataattaatattatgaatttaattagaacaattatgacatttaactaaactattttgctac 49453293  T
Q  106 atgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    || | |||   ||||||||||||| ||||| |||| |||||| ||| |||||||||||||||    
T  49453292 atattactataaaatattaccttcaatatgtcccgcgcgatagcacaggtcgatggtctagt 49453231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 38362731 - 38362859
Alignment:
Q  6 atggacatcatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttac 105  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  38362731 atggacatactatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaactaaactattttattac 38362830  T
Q  106 atgtcactgctaaatattaccttcgatat 134  Q
    || | || |  ||||||||||||||||||    
T  38362831 atattaccgtcaaatattaccttcgatat 38362859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 49067231 - 49067076
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattaga--acaattatgacattcaattaaactcttttgttacatgtcact 113  Q
    |||| |||||||||||||||| ||||||| |  ||||||||||||| |  |||| |  ||||| ||||||||||  |||||| ||||||||| | | ||     
T  49067231 tatgttatggtacagtaccaacgtctatgcttcttaatattatgaaat--attaaatgacaatcatgacattcatctaaactattttgttacctattacc 49067134  T
Q  114 gctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagtaata 171  Q
    |  ||||||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  49067133 gtcaaatattaccttccatatgacccgtgcgttagcacgggtcgatggtctagtaata 49067076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 18097847 - 18097765
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgcaag 465  Q
    |||||||||| ||||||||||||||||||||||  | |||| ||||||||||| |||||   |||||||||||||||||||||    
T  18097847 ggaaggcattctggaggttgaagaatgtatagcacggcttgcgggattaccctaaaagaaggccaagggtgattggatgcaag 18097765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 469 - 522
Target Start/End: Complemental strand, 14634566 - 14634512
Alignment:
Q  469 attaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  14634566 attaggtttgaagactgattcttgtaaacctttgatatctcttttgtaaagttac 14634512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 48314515 - 48314664
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgc 115  Q
    |||| |||||||||||||||| ||||||| |  ||||||||||||| |    ||  ||||| ||||||||||  |||||| ||||||||| | | || |     
T  48314515 tatgttatggtacagtaccaacgtctatgcttcttaatattatgaaatactatatgacaatcatgacattcatctaaactattttgttacctattaccgt 48314614  T
Q  116 taaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtcta 165  Q
     ||||||||||||| ||||||||||| || || |||||||||||| ||||    
T  48314615 caaatattaccttccatatgacccgtacgttagcacgggtcgatgatcta 48314664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 28101023 - 28100941
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||  |||||||||||||||||||||  |||||| |||||||||||    |||| |||||||||||||||||||||    
T  28101023 ggaaggcatttcggaggttgaagaatgtatagcacgacttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 28100941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 35918913 - 35918831
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgcaag 465  Q
    ||||||||||  |||||||||||||||||||||  |||||| |||||||| || |||||   |||||||||||||||||||||    
T  35918913 ggaaggcattccggaggttgaagaatgtatagcacgacttgcgggattactctaaaagaaggccaagggtgattggatgcaag 35918831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 51657245 - 51657341
Alignment:
Q  72 acaattatgacattcaattaaactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
    ||||||||||||||||  |||||| ||||||||| ||| ||    ||||||||||||| |||||||  ||||| || ||||||||||||||||||||    
T  51657245 acaattatgacattcatctaaactattttgttacttgttaccctcaaatattaccttccatatgacatgtgcgttagcacgggtcgatggtctagta 51657341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 15824473 - 15824412
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    |||||||||||||||| ||||||||| ||||| ||| ||| ||||||||||||||||||||||    
T  15824473 ttgaagaatgtatagcatgacttgtgtgatta-cctaaaacaccaagggtgattggatgcaag 15824412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 27422204 - 27422288
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtgaat 470  Q
    |||||||||| | ||| || ||||||||||||| ||||||||| |||||||   |||||| |||||| |||||| ||||||||||    
T  27422204 ggaaggcattctagagtttaaagaatgtatagcatgacttgtgagattaccagaaaagactaagggtaattggaagcaagtgaat 27422288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 37407806 - 37407873
Alignment:
Q  397 tggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||| ||||||||||||| | |||||||||| ||||| ||| |||||||||||||||| |||||||||    
T  37407806 tggagtttgaagaatgtatggtgtgacttgtgtgatta-cctaaaagaccaagggtgatcggatgcaag 37407873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 40823603 - 40823699
Alignment:
Q  72 acaattatgacattcaattaaactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
    ||||| ||||||||||  |||||| |||| |||| | | || |  ||||||||||||| |||||||||||||  || ||||||||||||||||||||    
T  40823603 acaatcatgacattcatctaaactatttttttacctattacggtcaaatattaccttccatatgacccgtgccttagcacgggtcgatggtctagta 40823699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 13495988 - 13496039
Alignment:
Q  117 aaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
    ||||||||||||||||||||||| | || || ||||||||||||||||||||    
T  13495988 aaatattaccttcgatatgacccttacgttagcacgggtcgatggtctagta 13496039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 465
Target Start/End: Original strand, 43227618 - 43227687
Alignment:
Q  399 gaggttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgcaag 465  Q
    ||||||||||||||||||||  | |||| ||||||||||| |||||   |||||||||||||||||||||    
T  43227618 gaggttgaagaatgtatagcacggcttgcgggattaccctaaaagaaggccaagggtgattggatgcaag 43227687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 465
Target Start/End: Complemental strand, 28138254 - 28138174
Alignment:
Q  388 aaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||  ||||||||||||||||||||||  ||||| |||||||||||    |||| ||||||||||||||| |||||    
T  28138254 aaggcattccggaggttgaagaatgtatagcgcaacttgcgggattaccctaaaaaaaggccaagggtgattggaagcaag 28138174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 17795400 - 17795445
Alignment:
Q  478 gaagacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  17795400 gaagacttattcttgtaacccattgatatctcttttgtaaagttac 17795445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 19103840 - 19103885
Alignment:
Q  478 gaagacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  19103840 gaagacttattcttgtaacccattgatatctcttttgtaaagttac 19103885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 43422486 - 43422407
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgc 462  Q
    ||||||||||  |||||||||||||||||||||  | |||| ||||||||||| ||| |   ||||||||||||||||||    
T  43422486 ggaaggcattccggaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaatgccaagggtgattggatgc 43422407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 13420299 - 13420256
Alignment:
Q  480 agacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  13420299 agacttattcttgtaactcattgatatctcttttgtaaagttac 13420256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 25634031 - 25634074
Alignment:
Q  480 agacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  25634031 agacttattcttgtaatccattgatatctcttttgtaaagttac 25634074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 28102115 - 28102072
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  28102115 agacttattcttgtaacccattgatatctcttttgtaaagttac 28102072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 521
Target Start/End: Complemental strand, 36871427 - 36871373
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagtta 521  Q
    |||||||||||||||||||||||||| || |||||| |||||| ||||||||||||    
T  36871427 gaattaggtttgaagacttattcttgcaaccctttgttatctc-tttgtaaagtta 36871373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 42297790 - 42297732
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctctt--ttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||  ||||||||||||    
T  42297790 gaattaggtttgaagactgattcttgtaaccctttgatatctttttgttgtaaagttac 42297732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 465
Target Start/End: Complemental strand, 53916692 - 53916607
Alignment:
Q  383 gatggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||| ||||  |||||||||||||||||||||  |||||| ||||||| |||    |||| |||| ||||||||||||||||    
T  53916692 gatggaagacattccggaggttgaagaatgtatagcacgacttgcgggattatcctaaaaaaaggccaacggtgattggatgcaag 53916607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 53917777 - 53917734
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  53917777 agacttattcttgtaacccattgatatctcttttgtaaagttac 53917734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 5258937 - 5258876
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | ||| |||||| ||||||| | |||||||||||||||| |||||||||    
T  5258937 ttgaagaatgtatggtgtggcttgtgtgattacc-taaaagaccaagggtgatcggatgcaag 5258876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 465
Target Start/End: Original strand, 6718065 - 6718126
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | ||| |||||| ||||||| | |||||||||||||||| |||||||||    
T  6718065 ttgaagaatgtatggggtggcttgtgtgattacc-taaaagaccaagggtgatcggatgcaag 6718126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 500
Target Start/End: Original strand, 7768702 - 7768735
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaaccttt 500  Q
    |||||||||||||||||| |||||||||||||||    
T  7768702 gaattaggtttgaagactaattcttgtaaccttt 7768735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 15823776 - 15823731
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttt 511  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||    
T  15823776 gaattaggtttgaagactaattcttgtaaccctttgacatctcttt 15823731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 25635523 - 25635568
Alignment:
Q  478 gaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||    
T  25635523 gaagacttattcttgtaacccattgatatctattttgtaaagttac 25635568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 522
Target Start/End: Complemental strand, 28761540 - 28761499
Alignment:
Q  482 acttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  28761540 acttattcttgtaacccattgatatctcttttgtaaagttac 28761499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 522
Target Start/End: Original strand, 31151490 - 31151530
Alignment:
Q  481 gacttattcttgtaacctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  31151490 gacttattcttgtaaccct-gatatctcttttgtaaagttac 31151530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 46966776 - 46966731
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttt 511  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||    
T  46966776 gaattaggtttgaagactaattattgtaaccatttgatatctcttt 46966731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 23635007 - 23635089
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||  | |||||||||||||||||||  | |||| |||||||||||    |||| |||||||||||||||| ||||    
T  23635007 ggaaggcattccgaaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaaggccaagggtgattggatacaag 23635089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 30761303 - 30761267
Alignment:
Q  131 atatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  30761303 atatgacccgtgcgatagcacgggtggatggtctagt 30761267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 25629650 - 25629537
Alignment:
Q  20 atatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgctaaa 119  Q
    |||||||| |||| ||| ||||||| ||||||||||||||| || |||||| ||||||||||||||||| |||||| ||||||||||||| |  || |||    
T  25629650 atatggtaaagtaacaacgtctatggtaattaatattatgatttgaattaggacaattatgacattcaactaaactattttgttacatgttagcgccaaa 25629551  T
Q  120 tattaccttcgata 133  Q
    ||||||||||||||    
T  25629550 tattaccttcgata 25629537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 467 - 517
Target Start/End: Original strand, 17847733 - 17847783
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacctttgatatctcttttgtaaa 517  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17847733 gaattaggtttgaagactaattcttgtaacctttgatatctcttttgtaaa 17847783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 31578406 - 31578350
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  31578406 gaattaggtttgaagactaattcttgtaaccttttgatatctcttttgtaaagttac 31578350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 16833756 - 16833812
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  16833756 gaattaggtttgaagacttactcttgtaatcatttgatatctcttttgtaaagttac 16833812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 31035325 - 31035380
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  31035325 gaattaggtttgaagacttattcttgtaaccctttgatatctc-tttgtaaagttac 31035380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 31573854 - 31573798
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  31573854 gaattaggtttgaagactaattcttgtaattctttgatatctcttttgtaaagttac 31573798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 34893175 - 34893024
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgc 115  Q
    |||| |||||||||||||||| ||||||| |  ||||||||||||| |    ||  |||||||||||||||| ||||||| ||||||||| | | || |     
T  34893175 tatgttatggtacagtaccaacgtctatgcttcttaatattatgaaatactatatgacaattatgacattcatttaaactgttttgttacctattaccgt 34893076  T
Q  116 taaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
     |||||||||| ||  ||||||  ||||| || |||||||| ||||||||||    
T  34893075 caaatattaccctccttatgacttgtgcgttagcacgggtcaatggtctagt 34893024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 27853823 - 27853776
Alignment:
Q  120 tattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||    
T  27853823 tattaccttcaatatgacccgtgcgttagcacgggtcgatggtctagt 27853776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 31574564 - 31574502
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    |||||||||||||| | || | |||||||||||| | ||||| ||||||||||||||||||||    
T  31574564 ttgaagaatgtataacatggcatgtgggattacctttaaagaacaagggtgattggatgcaag 31574502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 6376196 - 6376251
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||    
T  6376196 gaattaggtttgaagactaattcttgttaccttttgatatctc-tttgtaaagttac 6376251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 15956177 - 15956220
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  15956177 agacttattcttgtaacccattgatatctcttttgtaaagttac 15956220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 522
Target Start/End: Original strand, 21480723 - 21480765
Alignment:
Q  481 gacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  21480723 gacttattcttgtaacccattgatatctcttttgtaaagttac 21480765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 522
Target Start/End: Original strand, 21482531 - 21482573
Alignment:
Q  481 gacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  21482531 gacttattcttgtaacccattgatatctcttttgtaaagttac 21482573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 34255120 - 34255059
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||||| | ||| |||||| ||||||| | |||||||||||||||| |||||||||    
T  34255120 ttgaagaatgtatggtgtggcttgtgtgattacc-taaaagaccaagggtgatcggatgcaag 34255059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 520
Target Start/End: Complemental strand, 3005747 - 3005706
Alignment:
Q  480 agacttattcttgtaa-cctttgatatctcttttgtaaagtt 520  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  3005747 agacttattcttgtaatccattgatatctcttttgtaaagtt 3005706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 24255235 - 24255280
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaa 61  Q
    |||| |||||||||||||||||||||||| |  |||||||||||||    
T  24255235 tatgttatggtacagtaccaatgtctatgcttcttaatattatgaa 24255280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 25952738 - 25952783
Alignment:
Q  478 gaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||    
T  25952738 gaagacttattcttgtaactcattgatatctcttttgtaaaattac 25952783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 31162427 - 31162472
Alignment:
Q  478 gaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||    
T  31162427 gaagacttattcttgtaactcattgatatctcttttgtaaaattac 31162472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 33021031 - 33020974
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctctt-ttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||| |||||||||| | || ||||||||||||    
T  33021031 gaattaggtttgaagactgattcttgtaaccctttgatattttttgttgtaaagttac 33020974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 468 - 522
Target Start/End: Original strand, 3896029 - 3896085
Alignment:
Q  468 aattaggtttgaagacttattcttgtaac-ctt-tgatatctcttttgtaaagttac 522  Q
    ||||||||||||| | | ||||||||||| ||| |||||||||||||||||||||||    
T  3896029 aattaggtttgaaaattaattcttgtaactcttatgatatctcttttgtaaagttac 3896085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 41383971 - 41384023
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct 438  Q
    ||||||||||  |||||||||||||||||||||  | |||| |||||||||||    
T  41383971 ggaaggcattccggaggttgaagaatgtatagcacggcttgcgggattaccct 41384023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 8e-19; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 13125588 - 13125532
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13125588 gaattaggtttgaagacttattcttgtaaccctttgatatctcttttgtaaagttac 13125532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 465
Target Start/End: Complemental strand, 25249665 - 25249585
Alignment:
Q  387 gaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct--gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||| ||||||||||| |||||||||| ||||||| |||||||||||   |||| |||||||||||||||||||||    
T  25249665 gaaggcattctggaggttgaataatgtatagcatgacttgcgggattaccctaaaaaaggccaagggtgattggatgcaag 25249585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 14098940 - 14098858
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||||| |||||||||||||||||||||| || |||| |||||||||||    |||| |||||||||||||||||||||    
T  14098940 ggaaggcattctggaggttgaagaatgtatagcatggcttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 14098858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 471 - 522
Target Start/End: Original strand, 16561622 - 16561674
Alignment:
Q  471 taggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16561622 taggtttgaagacttattcttgtaaccctttgatatctcttttgtaaagttac 16561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 26613370 - 26613314
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  26613370 gaattaggtttgaagacttattcttgtaaccctttgatatctcttttggaaagttac 26613314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 30738760 - 30738704
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  30738760 gaattaggtttgaagacttattcttgtaaccctttgatgtctcttttgtaaagttac 30738704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 30790531 - 30790475
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  30790531 gaattaggtttggagacttattcttgtaacccattgatatctcttttgtaaagttac 30790475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 465
Target Start/End: Complemental strand, 28221683 - 28221606
Alignment:
Q  387 gaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    |||||||||| || | ||||| ||||||| | |||||||||| ||||||| | ||||||||||||||||||||||||||    
T  28221683 gaaggcattacggggtttgaataatgtattgtgtgacttgtgtgattacc-taaaagaccaagggtgattggatgcaag 28221606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 28222038 - 28221977
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||| ||||||||| |||||||||| ||||||| | ||||||||||||||||||||||||||    
T  28222038 ttgaataatgtatagtgtgacttgtgtgattacc-taaaagaccaagggtgattggatgcaag 28221977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 50077809 - 50077727
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||||| |||||||| |||||||||||||  |||||| |||||||||||    ||||  ||||||||||||||||||||    
T  50077809 ggaaggcattttggaggttaaagaatgtatagcacgacttgcgggattaccctaaaaaaaggtcaagggtgattggatgcaag 50077727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 6756690 - 6756733
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  6756690 agacttattcttgtaacctattgatatctcttttgtaaagttac 6756733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 50290380 - 50290431
Alignment:
Q  117 aaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
    ||||||||| ||| |||||||||||||| || ||||||||||||||||||||    
T  50290380 aaatattacgttccatatgacccgtgcgttagcacgggtcgatggtctagta 50290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 13126401 - 13126339
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    |||||||| ||||||| || ||||||||||||| || ||| ||||||||||||| ||||||||    
T  13126401 ttgaagaaagtatagcatggcttgtgggattacgctaaaaaaccaagggtgattagatgcaag 13126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 31424050 - 31423969
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct--gaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||  |||||||||||||||||| ||  | |||| |||||||||||   |||| |||||||||||||||||||||    
T  31424050 ggaaggcattccggaggttgaagaatgtattgcacggcttgcgggattaccctaaaaaaggccaagggtgattggatgcaag 31423969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 43104311 - 43104368
Alignment:
Q  467 gaattaggtttgaagacttatt-cttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||| || || ||||||||| |||||||||||||||||||||||||    
T  43104311 gaattaggtttgaagatttttttcttgtaaccctttgatatctcttttgtaaagttac 43104368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 8998809 - 8998897
Alignment:
Q  79 tgacattcaattaaactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    |||| ||||| |||||| ||||||||| | | || |  ||||||||| |||||||||||| ||||| || |||||||| ||||||||||    
T  8998809 tgaccttcaactaaactattttgttacctattaccgtcaaatattacattcgatatgacctgtgcgttagcacgggtcaatggtctagt 8998897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 470
Target Start/End: Original strand, 19753504 - 19753588
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtgaat 470  Q
    ||||||||||  || | ||||||||||||| |||| |||||||| ||||||   ||||||||| ||| |||||| ||||||||||    
T  19753504 ggaaggcatttcggggtttgaagaatgtatggcgttacttgtggaattaccggaaaagaccaatggtaattggaggcaagtgaat 19753588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 465
Target Start/End: Complemental strand, 27337847 - 27337781
Alignment:
Q  402 gttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgcaag 465  Q
    |||||||||||||||||  | |||| ||||||||||| |||||   |||||||||||||||||||||    
T  27337847 gttgaagaatgtatagcacggcttgcgggattaccctaaaagaaggccaagggtgattggatgcaag 27337781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 28279417 - 28279473
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| ||||||||||| | |||  |||||||||||||||||||    
T  28279417 gaattaggtttgaagactaattcttgtaactcattggcatctcttttgtaaagttac 28279473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 39268295 - 39268247
Alignment:
Q  117 aaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtcta 165  Q
    ||||||||| |||||||||||||||||| || | |||||||||||||||    
T  39268295 aaatattacattcgatatgacccgtgcgttagcgcgggtcgatggtcta 39268247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 518
Target Start/End: Original strand, 46783199 - 46783250
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaag 518  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  46783199 gaattaggtttgaagactaattcttgtaaccctttgatatct-ttttgtaaag 46783250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 776609 - 776687
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||  || | ||||||| ||||| | ||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  776609 ggaaggcattccggggtttgaagactgtatggtgtggcttgtgtgattacc-taaaagaccaagggtgattggatgcaag 776687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 3579733 - 3579690
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  3579733 agacttattcttgtaacccattgatatctcttttgtaaagttac 3579690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 8347390 - 8347347
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  8347390 agacttattcttgtaacccattgatatctcttttgtaaagttac 8347347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 9241203 - 9241160
Alignment:
Q  480 agacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  9241203 agacttattcttgtaactcattgatatctcttttgtaaagttac 9241160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 11457592 - 11457549
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  11457592 agacttattcttgtaacccattgatatctcttttgtaaagttac 11457549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 13548315 - 13548237
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    ||||||||||  || | ||||||||||||| | ||| |||||| ||||||| | |||||||||||||||| |||||||||    
T  13548315 ggaaggcattccggggtttgaagaatgtatggtgtggcttgtgtgattacc-taaaagaccaagggtgatcggatgcaag 13548237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 40134108 - 40134151
Alignment:
Q  480 agacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  40134108 agacttattcttgtaacacattgatatctcttttgtaaagttac 40134151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 42922394 - 42922437
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  42922394 agacttattcttgtaacccattgatatctcttttgtaaagttac 42922437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 521
Target Start/End: Complemental strand, 50078938 - 50078896
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagtta 521  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  50078938 agacttattcttgtaacccattgatatctcttttgtaaagtta 50078896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Complemental strand, 14183711 - 14183666
Alignment:
Q  478 gaagacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||    
T  14183711 gaagacttattcttgcaacccattgatatctcttttgtaaagttac 14183666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 16429119 - 16429164
Alignment:
Q  478 gaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| || |||||||||||||||||| |||||    
T  16429119 gaagacttattcttgtaacccattgatatctcttttgtaaggttac 16429164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 17319049 - 17319094
Alignment:
Q  478 gaagacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||| | |||||||||||||||| |||||||    
T  17319049 gaagacttattcttgtaacttattgatatctcttttgttaagttac 17319094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 522
Target Start/End: Complemental strand, 50076787 - 50076746
Alignment:
Q  482 acttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  50076787 acttattcttgtaatccattgatatctcttttgtaaagttac 50076746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 155858 - 155913
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||| | |||||||||||| |||| |||||| |||||||||||||    
T  155858 gaattaggtttgaagagtaattcttgtaaccttttgttatctc-tttgtaaagttac 155913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 16430211 - 16430293
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgcaag 465  Q
    ||||||||||  | |||||| ||||||||||||  | |||| ||||||||||| ||| |   |||||||||||||||||||||    
T  16430211 ggaaggcattccgaaggttggagaatgtatagcacggcttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 16430293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 465
Target Start/End: Original strand, 20301693 - 20301759
Alignment:
Q  402 gttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgcaag 465  Q
    |||||||||||||||||  | |||| || |||||||| |||||   |||||||||||||||||||||    
T  20301693 gttgaagaatgtatagcacggcttgcggaattaccctaaaagaaggccaagggtgattggatgcaag 20301759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 23085936 - 23085900
Alignment:
Q  131 atatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    |||||||||||||| || |||||||||||||||||||    
T  23085936 atatgacccgtgcgttagcacgggtcgatggtctagt 23085900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 25127082 - 25127122
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccct 438  Q
    |||||||||||||||||||||  | ||||||||||||||||    
T  25127082 ggaggttgaagaatgtatagcacggcttgtgggattaccct 25127122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 27916646 - 27916703
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaac---ctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||| ||||   |||||||||||| |||||||||||||    
T  27916646 gaattaggtttgaagactaattcttttaaccttctttgatatctc-tttgtaaagttac 27916703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 478 - 521
Target Start/End: Original strand, 31490075 - 31490119
Alignment:
Q  478 gaagacttattcttgtaac-ctttgatatctcttttgtaaagtta 521  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||    
T  31490075 gaagacttattcttgtaactcattgatatctcttttgtaaggtta 31490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 383 - 470
Target Start/End: Complemental strand, 44011529 - 44011442
Alignment:
Q  383 gatggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtgaat 470  Q
    ||||||||| |||  ||||||||||||||||||| | || |||||||||||||| | ||||| |||||||||||||||||||| ||||    
T  44011529 gatggaaggtattccggaggttgaagaatgtataacatggcttgtgggattaccataaaagatcaagggtgattggatgcaagagaat 44011442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 38029580 - 38029732
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaat-tagaacaattatgacattcaattaaactcttttgttacatgtcactg 114  Q
    |||| |||||||||||||||| ||||||| |  ||||||||||||| ||| | ||  ||||| || |||||||  |||||| ||||||||| | | || |    
T  38029580 tatgttatggtacagtaccaacgtctatgcttcttaatattatgaaattactatatgacaatcataacattcatctaaactattttgttacctattaccg 38029679  T
Q  115 ctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
      ||||||||||||| |||||| ||||| | || |||||||||||||||||||    
T  38029680 tcaaatattaccttcaatatgatccgtgtgttagcacgggtcgatggtctagt 38029732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 6046655 - 6046710
Alignment:
Q  467 gaattaggtttgaagacttattcttgt-aacctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  6046655 gaattaggtttgaagacttattcttgtaaacctttgatatctc-tttgtaaagttac 6046710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 6332381 - 6332437
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  6332381 gaattaggcttgaagacttattcttgtaaccctttaatatctcttttgtaaagttac 6332437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 729053 - 729103
Alignment:
Q  117 aaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||||||||||||||||||||||| || || |||||||||||||||||||    
T  729053 aaatattaccttcgatatgacccgtacgttagcacgggtcgatggtctagt 729103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 34405199 - 34405053
Alignment:
Q  22 atggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgctaaata 121  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |    ||  ||||| |||||||||| ||||||| ||||||||| | | || |  |||||    
T  34405199 atggtacagtaccaacgtctatgcttcttaatattatgaaatactatatgacaatcatgacattcatttaaactattttgttacttattaccgtcaaata 34405100  T
Q  122 ttaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
    |||||||| |||| |||||| || || ||||  ||||||||||||||    
T  34405099 ttaccttccatattacccgtacgttagcacgaatcgatggtctagta 34405053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 36159375 - 36159521
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgc 115  Q
    |||| |||||||||||||||| ||||||| |  ||||||||||||| |    ||  ||||| ||||||||||  |||||| ||||||||| | | || |     
T  36159375 tatgttatggtacagtaccaacgtctatgcttcttaatattatgaaatattatatgacaatcatgacattcatctaaactattttgttacctattaccgt 36159474  T
Q  116 taaatattaccttcgatatgacccgtgcgatatcacgggtcgatggt 162  Q
     ||||||||||||  ||||||| |||||| || ||||||||||||||    
T  36159475 caaatattacctttcatatgactcgtgcgttagcacgggtcgatggt 36159521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 24749860 - 24749912
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct 438  Q
    ||||||||||  ||||||||||||||||||||| ||||||| |||||||||||    
T  24749860 ggaaggcattccggaggttgaagaatgtatagcatgacttgcgggattaccct 24749912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 39703928 - 39703880
Alignment:
Q  122 ttaccttcgatatgacccgtgcgatatcacgggtcgatggtctagtaat 170  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||    
T  39703928 ttaccttcgaaatgacccgtgcgttagcacgggtcgatggtctagtaat 39703880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 468 - 522
Target Start/End: Original strand, 11081669 - 11081726
Alignment:
Q  468 aattaggtttgaagacttattcttgtaacc---tttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||| ||||||||||||   ||||||||||||| |||||||||||    
T  11081669 aattaggtttgaagactaattcttgtaaccctttttgatatctcttgtgtaaagttac 11081726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 461
Target Start/End: Complemental strand, 24816031 - 24815968
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatg 461  Q
    ||||||||||||||||||||| |  |||| ||||||||||| |||| |||||| ||||||||||    
T  24816031 ggaggttgaagaatgtatagcatagcttgcgggattaccctaaaaggccaaggttgattggatg 24815968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 21679346 - 21679414
Alignment:
Q  400 aggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||||||||||||||  |||||| |||||||||||    |||| |||||||||||||||||||||    
T  21679346 aggttgaagaatgtatagcacgacttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 21679414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 40462365 - 40462315
Alignment:
Q  117 aaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||||||||||  |||||||||||||| || |||||||||||||||||||    
T  40462365 aaatattacctttcatatgacccgtgcgttagcacgggtcgatggtctagt 40462315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 522
Target Start/End: Complemental strand, 31435164 - 31435119
Alignment:
Q  478 gaagacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  31435164 gaagacttattcttgtaacccattgatatctcttttgtaaagttac 31435119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 13290602 - 13290547
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||| | |||||||||||| ||||||||||| |||||||||||||    
T  13290602 gaattaggtttgaagaataattcttgtaaccttttgatatctc-tttgtaaagttac 13290547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 38395558 - 38395610
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct 438  Q
    ||||||||||  |||||||||||||||||||||  | ||||||||||||||||    
T  38395558 ggaaggcattccggaggttgaagaatgtatagcacggcttgtgggattaccct 38395610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 465
Target Start/End: Original strand, 43807 - 43876
Alignment:
Q  399 gaggttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgcaag 465  Q
    |||||||||||||||||| |  | |||| ||||||||||| |||||   |||||||||||||||||||||    
T  43807 gaggttgaagaatgtatatcacggcttgcgggattaccctaaaagaaggccaagggtgattggatgcaag 43876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 7471034 - 7470969
Alignment:
Q  402 gttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgcaa 464  Q
    |||||||||||||||||  | |||| ||||||||||| |||||   ||||||||||||||||||||    
T  7471034 gttgaagaatgtatagcacggcttgcgggattaccctaaaagaagtccaagggtgattggatgcaa 7470969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 9679233 - 9679276
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  9679233 agacttattcttgtaacccattgatatctcttttgtaaagttac 9679276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 16718882 - 16718977
Alignment:
Q  72 acaattatgacattcaattaaactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||| ||||||||||  |||||| ||||||||| | | || |  ||||||||||||| |||| |||||||| |   |||||||||||||||||||    
T  16718882 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatataacccgtgctaatgcacgggtcgatggtctagt 16718977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 17693092 - 17693187
Alignment:
Q  72 acaattatgacattcaattaaactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||| ||||||||||  |||||| ||||||||| | | || |  ||||||||||||| |||| |||||||| |   |||||||||||||||||||    
T  17693092 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatataacccgtgctaatgcacgggtcgatggtctagt 17693187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 20091660 - 20091617
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  20091660 agacttattcttgtaacccattgatatctcttttgtaaagttac 20091617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 20137224 - 20137181
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  20137224 agacttattcttgtaacccattgatatctcttttgtaaagttac 20137181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 22393896 - 22393939
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  22393896 agacttattcttgtaacccattgatatctcttttgtaaagttac 22393939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 25276315 - 25276358
Alignment:
Q  480 agacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  25276315 agacttattcttgtaaaccattgatatctcttttgtaaagttac 25276358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 26295621 - 26295664
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  26295621 agacttattcttgtaacccattgatatctcttttgtaaagttac 26295664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 42331112 - 42331069
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  42331112 agacttattcttgtaacccattgatatctcttttgtaaagttac 42331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 497
Target Start/End: Complemental strand, 40281505 - 40281475
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc 497  Q
    |||||||||||||||||||||||||||||||    
T  40281505 gaattaggtttgaagacttattcttgtaacc 40281475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 465
Target Start/End: Original strand, 48490958 - 48491019
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    |||||||||||||   ||| |||||| ||||||| | ||||||||||||||||||||||||||    
T  48490958 ttgaagaatgtatgatgtggcttgtgtgattacc-taaaagaccaagggtgattggatgcaag 48491019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 6067328 - 6067283
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttt 511  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||    
T  6067328 gaattaggtttgaagactaattcttgtaatcctctgatatctcttt 6067283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 522
Target Start/End: Original strand, 24258639 - 24258680
Alignment:
Q  482 acttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  24258639 acttattcttgtaacccattgatatctcttttgtaaagttac 24258680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 468
Target Start/End: Original strand, 26214340 - 26214405
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtga 468  Q
    ||||||||||||| || || ||||||||||||||   |||||| |||||| |||||| ||||||||    
T  26214340 ttgaagaatgtatggcttggcttgtgggattaccagaaaagacgaagggtaattggaggcaagtga 26214405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 6049032 - 6049087
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||| ||||||| ||| ||||||||||| | |||||||||||||    
T  6049032 gaattaggtttgaagacgtattcttataaccctttgatatc-cctttgtaaagttac 6049087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 1410 - 1258
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgc 115  Q
    |||| ||||||||||||||||  |||||| |  ||||||||||||| |    ||  ||||| ||||||||||  |||||| ||||||||  | | ||||     
T  1410 tatgttatggtacagtaccaacatctatgcttcttaatattatgaaatactatatgacaatcatgacattcatctaaactattttgttatctattactgt 1311  T
Q  116 taaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
     ||||||||||||| |||||||||||||| || ||||| ||||||||||||||    
T  1310 caaatattaccttccatatgacccgtgcgttagcacggatcgatggtctagta 1258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 15694031 - 15694087
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  15694031 gaattaggtttgaagactaattcttgtaaccttttgatatctcttttgtaaagttac 15694087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 40699501 - 40699557
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  40699501 gaattaggtttgaagacttatttttgtaatcctttgatatctcttttgtaaagttac 40699557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 13829166 - 13829087
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    |||||||||| ||||| |||||||||||||||| || ||||||| |||||||| |||||  |||||||||||||| ||||    
T  13829166 ggaaggcattctggagtttgaagaatgtatagcatggcttgtggcattaccctaaaagagtaagggtgattggatacaag 13829087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 27136253 - 27136197
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    |||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  27136253 gaattaggtttggagacttattcttgtaactcattgatatctcttttgtaaagttac 27136197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 522
Target Start/End: Original strand, 35107430 - 35107477
Alignment:
Q  475 tttgaagacttattcttgtaacctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  35107430 tttgaagacttattcttgtaacctttgttatctcttttgtaatgttac 35107477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 6396554 - 6396470
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaagtgaat 470  Q
    |||||||||| ||| |||||| ||||||||| |  |||||||||||||| |   ||||||||||||| |||||| ||||||||||    
T  6396554 ggaaggcattttgggggttgacgaatgtataacacgacttgtgggattaactgaaaagaccaagggtaattggaggcaagtgaat 6396470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 13828471 - 13828415
Alignment:
Q  467 gaattaggtttgaagacttattcttgta-acctttgatatctcttttgtaaagttac 522  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  13828471 gaattatgtttgaagacttattcttgtagccctttgatatctcttttgtaaaattac 13828415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 20146724 - 20146681
Alignment:
Q  480 agacttattcttgtaac-ctttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  20146724 agacttattcttgtaactctttgatatctcttttgtaaagttac 20146681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 12008529 - 12008479
Alignment:
Q  117 aaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    |||||||||||||||||||||||||| | || |||||||| ||||||||||    
T  12008529 aaatattaccttcgatatgacccgtgtgttagcacgggtcaatggtctagt 12008479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 17848581 - 17848623
Alignment:
Q  480 agacttattcttgtaacctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  17848581 agacttattcttgtaaccattgatatctcttttgtaacgttac 17848623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 20589818 - 20589874
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||| |||||||||||| ||| || |||||||||||||||| |||||||    
T  20589818 gaattaggtttggagacttattcttttaacccattgatatctcttttgtgaagttac 20589874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 37995313 - 37995465
Alignment:
Q  16 tatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttttgttacatgtcactgc 115  Q
    |||| ||||||||| |||||| ||||||| |  ||||||||||||| |    ||  ||||| |||||||| |  |||||| ||||||||| |   || |     
T  37995313 tatgttatggtacaataccaacgtctatgcttcttaatattatgaaatactatatgacaatcatgacatttatctaaactattttgttacctactaccgt 37995412  T
Q  116 taaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
     ||||||||||||| |||||| ||||| | || ||||||||||||||||||||    
T  37995413 caaatattaccttccatatgatccgtgtgttagcacgggtcgatggtctagta 37995465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 6258932 - 6258889
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  6258932 agacttattcttgtaacccattgatatctcttttgtaaagttac 6258889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 465
Target Start/End: Complemental strand, 6263169 - 6263088
Alignment:
Q  387 gaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||| |||| ||||||||||||||||||||||  | |||| |||||||||||    |||| ||||| |||||||||||||||    
T  6263169 gaagacattctggaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaaggccaagtgtgattggatgcaag 6263088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 6264264 - 6264221
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  6264264 agacttattcttgtaacccattgatatctcttttgtaaagttac 6264221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 17897361 - 17897318
Alignment:
Q  480 agacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||| ||||||||||||||    
T  17897361 agacttattcttgtaaccctttgatatctattttgtaaagttac 17897318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 18800429 - 18800386
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  18800429 agacttattcttgtaacccattgatatctcttttgtaaagttac 18800386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 31732892 - 31732849
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  31732892 agacttattcttgtaacccattgatatctcttttgtaaagttac 31732849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 31733882 - 31733815
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatgcaag 465  Q
    |||||||||||||||||||||  ||||||   ||||||||| |||  |||| ||||||||||||||||    
T  31733882 ggaggttgaagaatgtatagcacgacttgctagattaccctaaaaagccaaaggtgattggatgcaag 31733815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 42923624 - 42923581
Alignment:
Q  480 agacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  42923624 agacttattcttgtaatccattgatatctcttttgtaaagttac 42923581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 30720739 - 30720685
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaa-cctttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||||||| ||||||| |  ||||||||||||||||    
T  30720739 gaattaggtttgaagactaattcttgtaaccctttgaaa--tcttttgtaaagttac 30720685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 522
Target Start/End: Complemental strand, 45239090 - 45239049
Alignment:
Q  482 acttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  45239090 acttattcttgtaacccattgatatctcttttgtaaagttac 45239049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 434
Target Start/End: Complemental strand, 28569105 - 28569053
Alignment:
Q  382 ggatggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggatta 434  Q
    ||||||||||||||  || | ||||||||||||| || |||||||||||||||    
T  28569105 ggatggaaggcattccggggtttgaagaatgtatggcatgacttgtgggatta 28569053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 33604049 - 33604104
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    |||||||||||||||||| |||||| ||||| |||||||| || |||||||||||||    
T  33604049 gaattaggtttgaagactaattcttctaaccttttgatatatc-tttgtaaagttac 33604104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 57557 - 57501
Alignment:
Q  467 gaattaggtttgaagacttattcttgtaacc-tttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||    
T  57557 gaattaggtttgaagatctattcttgtaaccctttgatatctattttgtaaagttac 57501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 12683 - 12588
Alignment:
Q  72 acaattatgacattcaattaaactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||| ||| |||||| ||||||| ||||||||| | | || |  ||||||||| ||| |||||||||||||  || |||||||||||||||||||    
T  12683 acaatcatgtcattcatttaaactattttgttacctattaccgtcaaatattacattccatatgacccgtgcattagcacgggtcgatggtctagt 12588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 70248 - 70179
Alignment:
Q  399 gaggttgaagaatgtatagcgtgacttgtgggattaccctgaaaga---ccaagggtgattggatgcaag 465  Q
    ||||||||||||||||||||  |||||| |||||||| || |||||   |||||||||||||||||||||    
T  70248 gaggttgaagaatgtatagcacgacttgcgggattactctaaaagaaggccaagggtgattggatgcaag 70179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 4066 - 4124
Alignment:
Q  403 ttgaagaatgtatagcgtgacttgtgggattaccctgaaagaccaagggtgattggatg 461  Q
    ||||||||||||||||  |||||| ||||||||||| |||  |||||||||||||||||    
T  4066 ttgaagaatgtatagcacgacttgcgggattaccctaaaaagccaagggtgattggatg 4124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 17760 - 17836
Alignment:
Q  92 aactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
    |||| ||||||||||| | || |  ||||||||||||||| ||||| |||||  || ||||||||||||||||||||    
T  17760 aactattttgttacatattaccgtcaaatattaccttcgaaatgactcgtgcattagcacgggtcgatggtctagta 17836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 25652 - 25728
Alignment:
Q  92 aactcttttgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagta 168  Q
    |||| ||||||||||| | || |  ||||||||||||||| ||||| |||||  || ||||||||||||||||||||    
T  25652 aactattttgttacatattaccgtcaaatattaccttcgaaatgactcgtgcattagcacgggtcgatggtctagta 25728  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 35159 - 35241
Alignment:
Q  386 ggaaggcattatggaggttgaagaatgtatagcgtgacttgtgggattaccctgaaa---gaccaagggtgattggatgcaag 465  Q
    ||||||||||  ||||||||||||||||| |||  | |||| ||||||||||| |||   | |||||||||||||||||||||    
T  35159 ggaaggcattccggaggttgaagaatgtacagcacggcttgcgggattaccctaaaaaagggccaagggtgattggatgcaag 35241  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 51294 - 51364
Alignment:
Q  398 ggaggttgaagaatgtatagcgtgacttgtgggattaccct---gaaagaccaagggtgattggatgcaag 465  Q
    |||||||||||||||||||||  | |||| |||||||||||    |||| |||||||||||||||||||||    
T  51294 ggaggttgaagaatgtatagcacggcttgcgggattaccctaaaaaaaggccaagggtgattggatgcaag 51364  T

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Target: scaffold0339 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 4169 - 4212
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  4169 agacttattcttgtaacccattgatatctcttttgtaaagttac 4212  T

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Target: scaffold0224 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 15937 - 15894
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  15937 agacttattcttgtaacccattgatatctcttttgtaaagttac 15894  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Original strand, 15192 - 15235
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  15192 agacttattcttgtaacccattgatatctcttttgtaaagttac 15235  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 16766 - 16723
Alignment:
Q  480 agacttattcttgtaacct-ttgatatctcttttgtaaagttac 522  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  16766 agacttattcttgtaacccattgatatctcttttgtaaagttac 16723  T

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Target: scaffold1155 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 117 - 68
Alignment:
Q  118 aatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||||||||||||||| ||||||||| || ||  |||||||||||||||    
T  117 aatattaccttcgatataacccgtgcgttagcagcggtcgatggtctagt 68  T

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Target: scaffold0642 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 189 - 238
Alignment:
Q  118 aatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||||||||||||||| ||||||||| || ||  |||||||||||||||    
T  189 aatattaccttcgatataacccgtgcgttagcagcggtcgatggtctagt 238  T

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Target: scaffold0345 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 10100 - 10149
Alignment:
Q  118 aatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||||||||||||||| ||||||||| || ||  |||||||||||||||    
T  10100 aatattaccttcgatataacccgtgcgttagcagcggtcgatggtctagt 10149  T

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Target: scaffold0105 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 28880 - 28831
Alignment:
Q  118 aatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 167  Q
    ||||||||||||||||| ||||||||| || ||  |||||||||||||||    
T  28880 aatattaccttcgatataacccgtgcgttagcagcggtcgatggtctagt 28831  T

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