View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8319A_low_69 (Length: 302)
Name: NF8319A_low_69
Description: NF8319A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8319A_low_69 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 6 - 286
Target Start/End: Original strand, 28606468 - 28606748
Alignment:
| Q |
6 |
atatatatgtcaaattcatctcgagattctttaattttaatatttgtattagattagtcctttaaggttttgtcaatttgaaattggtcctttatgttaa |
105 |
Q |
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| T |
28606468 |
atatatatgtcaaattcatctcgagcttctttaattttaatatttgtattagattagtcctttaaggttttgtcaagttgaaattggtcttttatgttag |
28606567 |
T |
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| Q |
106 |
taatagtgtatatcgttactcttctattaagttgtcattcaaaaacaagcatatgtgtccattaacttgctatatacatttctcacataaattttttggc |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
28606568 |
taatagtgtatatcgttactcttctattaagttgtcatttaaaaacaagcatatgtgtccattaacttgctatatacatttctcacataaaatttttggc |
28606667 |
T |
|
| Q |
206 |
attacaaaataatgatagttctccttaatgggatcatatgcatcgtcatttgattcctcagtctccgactctgatgattta |
286 |
Q |
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||||| ||| |||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||| |
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| T |
28606668 |
attactaaagaatgatagttctccttaatgtcatcatatgcatcgttatttgattccttagtcttcgactctgatgattta |
28606748 |
T |
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