View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8319A_low_93 (Length: 269)
Name: NF8319A_low_93
Description: NF8319A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8319A_low_93 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 55396551 - 55396819
Alignment:
| Q |
1 |
ttggtcatacctcacgacatcataccttctttgagatgcttggtaacttcagctttggtgattatttcaaaaaacaagctattcaatgggcatgggactt |
100 |
Q |
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| T |
55396551 |
ttggtcatacctcacgacatcataccttctttgagatgcttggtaacttcagctttggtgattatttcaaaaaacaagctattcaatgggcatgggactt |
55396650 |
T |
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| Q |
101 |
atctaccattgagtttggtttgcctccagaaagattatggattagtgtttaccaagacgatcatgagactttccagttatggtctcaacaggtaattaca |
200 |
Q |
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| T |
55396651 |
atctaccattgagtttggtttgcctccagaaagattatggattagtgtttaccaagacgatcatgagactttccagttatggtctcaacaggtaattaca |
55396750 |
T |
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| Q |
201 |
tcacatttccttttaattacccctctcctcttccgttcctgtcatcacatcttcatttctctgcaggtt |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55396751 |
tcacatttccttttaattacccctctcctcttccgttcctgtcatcacatcttcatttctctgcaggtt |
55396819 |
T |
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