View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8319_high_1 (Length: 694)

Name: NF8319_high_1
Description: NF8319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8319_high_1
NF8319_high_1
[»] chr3 (25 HSPs)
chr3 (162-683)||(3669480-3669990)
chr3 (281-376)||(3670709-3670804)
chr3 (292-373)||(44558082-44558163)
chr3 (19-82)||(3670043-3670106)
chr3 (280-376)||(37180068-37180164)
chr3 (297-372)||(41926949-41927024)
chr3 (247-373)||(33475148-33475273)
chr3 (249-373)||(8574980-8575105)
chr3 (275-375)||(27867773-27867873)
chr3 (274-369)||(116626-116721)
chr3 (280-371)||(32148102-32148193)
chr3 (292-374)||(117948-118030)
chr3 (281-374)||(19825279-19825372)
chr3 (280-377)||(41786578-41786675)
chr3 (280-369)||(54185304-54185393)
chr3 (297-373)||(25233404-25233480)
chr3 (247-375)||(44555592-44555720)
chr3 (274-373)||(45234415-45234513)
chr3 (280-370)||(8576431-8576521)
chr3 (297-371)||(19831134-19831208)
chr3 (280-374)||(33476681-33476775)
chr3 (280-354)||(37178656-37178730)
chr3 (272-373)||(52700838-52700939)
chr3 (297-373)||(31992189-31992265)
chr3 (280-376)||(32944110-32944206)
[»] chr8 (27 HSPs)
chr8 (274-385)||(13324048-13324159)
chr8 (274-374)||(39338016-39338116)
chr8 (247-373)||(32244889-32245015)
chr8 (280-373)||(16472689-16472782)
chr8 (280-373)||(16477260-16477353)
chr8 (281-374)||(42816014-42816107)
chr8 (281-376)||(39308272-39308367)
chr8 (253-323)||(6243206-6243276)
chr8 (274-376)||(13322880-13322982)
chr8 (280-374)||(24451176-24451270)
chr8 (280-374)||(37705832-37705926)
chr8 (290-375)||(22959782-22959867)
chr8 (281-374)||(42817211-42817304)
chr8 (274-374)||(37707220-37707320)
chr8 (282-324)||(45023325-45023367)
chr8 (297-374)||(21575506-21575583)
chr8 (290-375)||(39336711-39336796)
chr8 (297-376)||(21136461-21136540)
chr8 (247-382)||(3866855-3866991)
chr8 (292-374)||(36062499-36062581)
chr8 (281-383)||(39310623-39310725)
chr8 (274-374)||(41280183-41280283)
chr8 (274-376)||(1692582-1692684)
chr8 (280-370)||(32243357-32243447)
chr8 (274-371)||(24452597-24452694)
chr8 (297-374)||(44893531-44893608)
chr8 (280-376)||(3865362-3865458)
[»] chr4 (21 HSPs)
chr4 (297-379)||(45046734-45046816)
chr4 (281-374)||(45045199-45045292)
chr4 (280-373)||(10322821-10322914)
chr4 (247-376)||(28162908-28163037)
chr4 (274-354)||(25244100-25244180)
chr4 (274-378)||(44208569-44208673)
chr4 (280-375)||(31318058-31318153)
chr4 (253-374)||(34513530-34513651)
chr4 (274-374)||(11669818-11669918)
chr4 (274-374)||(33688373-33688473)
chr4 (281-373)||(40171403-40171495)
chr4 (280-374)||(35054882-35054976)
chr4 (261-374)||(13086413-13086526)
chr4 (297-373)||(35061335-35061411)
chr4 (327-381)||(10321394-10321448)
chr4 (274-352)||(25423182-25423259)
chr4 (280-373)||(15562628-15562720)
chr4 (297-368)||(31316242-31316313)
chr4 (282-373)||(40170070-40170161)
chr4 (280-374)||(34512226-34512320)
chr4 (272-376)||(48738182-48738286)
[»] chr5 (16 HSPs)
chr5 (261-374)||(23318020-23318133)
chr5 (274-375)||(41140118-41140219)
chr5 (274-373)||(13921150-13921249)
chr5 (270-371)||(23312658-23312759)
chr5 (280-373)||(41138725-41138818)
chr5 (274-374)||(34527599-34527698)
chr5 (272-378)||(37811956-37812062)
chr5 (247-373)||(40272134-40272260)
chr5 (297-374)||(26866198-26866275)
chr5 (304-380)||(19193063-19193139)
chr5 (274-370)||(26864933-26865029)
chr5 (297-372)||(38693959-38694034)
chr5 (307-373)||(9168465-9168531)
chr5 (292-374)||(34526720-34526802)
chr5 (297-374)||(37813265-37813342)
chr5 (292-372)||(43439949-43440029)
[»] chr7 (19 HSPs)
chr7 (253-374)||(12622071-12622191)
chr7 (274-373)||(38198761-38198860)
chr7 (274-376)||(33625903-33626005)
chr7 (281-375)||(43831953-43832047)
chr7 (281-373)||(38875063-38875155)
chr7 (253-372)||(8082754-8082873)
chr7 (281-374)||(46043365-46043458)
chr7 (281-373)||(43308455-43308547)
chr7 (297-375)||(43309636-43309714)
chr7 (297-373)||(46331887-46331962)
chr7 (280-375)||(8081483-8081578)
chr7 (280-379)||(38595518-38595617)
chr7 (297-372)||(44166843-44166918)
chr7 (297-371)||(43830653-43830727)
chr7 (274-375)||(3495356-3495456)
chr7 (308-373)||(38873881-38873946)
chr7 (280-373)||(40303777-40303870)
chr7 (292-373)||(43084353-43084434)
chr7 (292-373)||(45957805-45957886)
[»] chr1 (24 HSPs)
chr1 (281-378)||(21795897-21795994)
chr1 (247-374)||(12251855-12251982)
chr1 (274-373)||(36248032-36248131)
chr1 (272-376)||(51839891-51839995)
chr1 (253-376)||(27551993-27552116)
chr1 (292-373)||(37987209-37987290)
chr1 (292-372)||(12368726-12368806)
chr1 (280-372)||(21794779-21794870)
chr1 (272-374)||(25351646-25351747)
chr1 (280-374)||(36362176-36362270)
chr1 (297-374)||(12898910-12898987)
chr1 (297-373)||(29232165-29232241)
chr1 (274-374)||(30981448-30981547)
chr1 (247-323)||(49768896-49768972)
chr1 (280-372)||(51338140-51338232)
chr1 (274-373)||(15053345-15053444)
chr1 (297-383)||(27550461-27550547)
chr1 (280-373)||(33708018-33708111)
chr1 (297-374)||(37985907-37985983)
chr1 (274-354)||(46595871-46595951)
chr1 (274-373)||(33709443-33709542)
chr1 (297-372)||(36368414-36368489)
chr1 (274-372)||(15054690-15054788)
chr1 (298-376)||(36249380-36249458)
[»] chr6 (25 HSPs)
chr6 (270-373)||(7852247-7852349)
chr6 (261-374)||(7855373-7855486)
chr6 (297-374)||(22971591-22971668)
chr6 (297-374)||(23816730-23816807)
chr6 (281-376)||(15119345-15119440)
chr6 (281-340)||(5765537-5765596)
chr6 (281-340)||(5769072-5769131)
chr6 (281-340)||(5772607-5772666)
chr6 (281-340)||(5776142-5776201)
chr6 (281-340)||(5779677-5779736)
chr6 (281-340)||(5783212-5783271)
chr6 (281-340)||(5786747-5786806)
chr6 (281-340)||(5790282-5790341)
chr6 (281-340)||(5793817-5793876)
chr6 (281-340)||(5797352-5797411)
chr6 (281-340)||(5800887-5800946)
chr6 (281-340)||(5804422-5804481)
chr6 (281-340)||(5807957-5808016)
chr6 (281-340)||(5811492-5811551)
chr6 (281-340)||(5815027-5815086)
chr6 (281-340)||(5818562-5818621)
chr6 (255-373)||(3914956-3915074)
chr6 (261-331)||(2546511-2546581)
chr6 (280-373)||(5086947-5087039)
chr6 (292-344)||(5078724-5078776)
[»] scaffold0651 (2 HSPs)
scaffold0651 (280-375)||(5517-5612)
scaffold0651 (297-368)||(7384-7455)
[»] chr2 (20 HSPs)
chr2 (280-374)||(21438994-21439088)
chr2 (280-374)||(44492579-44492673)
chr2 (280-373)||(9111246-9111339)
chr2 (274-373)||(44493997-44494096)
chr2 (274-351)||(18673308-18673386)
chr2 (274-372)||(33001359-33001457)
chr2 (280-351)||(1373704-1373775)
chr2 (274-373)||(23787319-23787418)
chr2 (280-354)||(20719540-20719614)
chr2 (274-352)||(33000691-33000769)
chr2 (253-374)||(9112173-9112294)
chr2 (274-371)||(20721045-20721142)
chr2 (292-373)||(20721736-20721817)
chr2 (272-376)||(30982908-30983011)
chr2 (297-376)||(32317886-32317965)
chr2 (280-351)||(42486773-42486844)
chr2 (308-374)||(3105939-3106005)
chr2 (253-375)||(3117645-3117767)
chr2 (280-376)||(1373260-1373356)
chr2 (272-368)||(32320038-32320132)
[»] scaffold0005 (1 HSPs)
scaffold0005 (247-375)||(282609-282737)
[»] scaffold0093 (1 HSPs)
scaffold0093 (297-374)||(49276-49353)
[»] scaffold0003 (1 HSPs)
scaffold0003 (274-373)||(239206-239305)
[»] scaffold0097 (2 HSPs)
scaffold0097 (280-354)||(23378-23452)
scaffold0097 (292-373)||(25565-25646)
[»] scaffold0026 (1 HSPs)
scaffold0026 (280-376)||(100856-100952)


Alignment Details
Target: chr3 (Bit Score: 393; Significance: 0; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 162 - 683
Target Start/End: Complemental strand, 3669990 - 3669480
Alignment:
Q  162 aatgttaatgacatgtggcatgccatgtcataaaatgtgtccaaacaacattcaagcggcatgctccgtttgcctggtcatcaataatttaacggcaatg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||        
T  3669990 aatgttaatgacatgtggcatgccatgtcataaaatgtgtccatacaacatccaagtggcatgctccgtttgcctggtcatcaataatttaacggc---- 3669895  T
Q  262 accaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaa 361  Q
            ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||  ||||||| |  ||||||| ||||||||||||    
T  3669894 --------tgcaaacggcaaaaaacgttaaggactaaaaatataataaaatttaagtagggattcataatggaagcacccctatttacagggatcttaaa 3669803  T
Q  362 tataattaaccctaatatttatgacaaaaacccttttgaaatcacatcggagcgtgtatgagtagccgtttcacatccaacggccagtaagagcgtaact 461  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3669802 tataattaaccctaatatttatgacagaaacccttttgaaatcacatcggagcgtgtatgagtagccgtttcacatccaacggccagtaagagcgtaact 3669703  T
Q  462 ttatttcttccctcttcaatctccaacggtcatataatctcttccaaatacaaataattccctctttcaacctcactcttcatttcatcaaccc-aaccc 560  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  3669702 ttatttcttccctcttcaatctccaacggtcacataatctcttccaaatacaaataattccctctttcaacctcactcttcatttcttcaacccaaaccc 3669603  T
Q  561 nnnnnnntaatcagattcttcttaaatcttgaaacctttctcccaaaagcacttaaataaaaaagcacttaaccatgaataacacaaacaacaacaacat 660  Q
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3669602 aaaaaactaatcagattcttcttaaatcttgaaacctttctcccaaaagcacttaaataaaaaagcacttaaccatgaataacacaaacaacaacaacat 3669503  T
Q  661 tcttcttcattccacacaggttc 683  Q
    |||||||||||||||||||||||    
T  3669502 tcttcttcattccacacaggttc 3669480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 281 - 376
Target Start/End: Original strand, 3670709 - 3670804
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    |||||| |||||||| |||||||||||||||||||| ||| |||  ||||||||| | |||||||||||| ||| |||||| ||||||||||||||    
T  3670709 aaaaacgttgaggaccaaaaatataataaaatttaagtagagatcaatgttggaaacacgtctatttataaggaccttaaacataattaaccctaa 3670804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 292 - 373
Target Start/End: Original strand, 44558082 - 44558163
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||| |||||| ||||||||||||| |||||| | ||||||||| |||||||||||||||||| || ||| |||||||||||    
T  44558082 ggacgaaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggacctaaaacataattaaccc 44558163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 3670106 - 3670043
Alignment:
Q  19 ggttaaatattgtgattgggacggaccaaagaatctgggttgagtttaatgaaaggggattagg 82  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||| ||||||||    
T  3670106 ggttaaatattgtgattggggaggatcaaagaatctgagttgagtttaatgaaagaggattagg 3670043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 37180068 - 37180164
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    ||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||| | || ||||||||||||| || |||  |||||||||||||    
T  37180068 aaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacgtaattaaccctaa 37180164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 41927024 - 41926949
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    |||||| ||||||||||||||||||||   ||||||||||| ||  |||||||||||| |||||| ||||||||||    
T  41927024 aaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttatagggaccttaaacataattaacc 41926949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 373
Target Start/End: Complemental strand, 33475273 - 33475148
Alignment:
Q  247 aatttaacggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatt 346  Q
    ||||| ||||||| ||||| |  || |||||| ||||||| |||||||  |||||| ||||||| |||||||||||||  ||||||||||| ||| ||||    
T  33475273 aatttgacggcaaggaccagacttgtaaacggaaaaaaacgttgaggatgaaaaatttaataaa-tttaaatagggatcaatgttggaagctcgtttatt 33475175  T
Q  347 tatagggatcttaaatataattaaccc 373  Q
    |||| | |  ||||| |||||||||||    
T  33475174 tataagaactttaaacataattaaccc 33475148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 373
Target Start/End: Complemental strand, 8575105 - 8574980
Alignment:
Q  249 tttaacggcaatgaccaaatctgcaaacggcaaaaaa-cattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctattt 347  Q
    |||||||||||||||||||  | |||| || |||||| | ||| |||  |||||| |||||||||||||||| ||||  ||||||||||| |   |||||    
T  8575105 tttaacggcaatgaccaaacttacaaatggaaaaaaaacgttggggatgaaaaatttaataaaatttaaatatggatcaatgttggaagctcacttattt 8575006  T
Q  348 atagggatcttaaatataattaaccc 373  Q
     |||||| |||||| |||||||||||    
T  8575005 gtagggaccttaaacataattaaccc 8574980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 275 - 375
Target Start/End: Complemental strand, 27867873 - 27867773
Alignment:
Q  275 acggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||| ||||||| |||||||| |||||| ||||||||||||| || | | | |||||| || | || ||||||||||||| || ||| ||||||||||||    
T  27867873 acggaaaaaaacgttgaggaccaaaaatttaataaaatttaagtatgaactaatgttgaaaactcgcctatttatagggacctaaaacataattaaccct 27867774  T
Q  375 a 375  Q
    |    
T  27867773 a 27867773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 369
Target Start/End: Complemental strand, 116721 - 116626
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataatta 369  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||| | ||  |||||||||||| || ||| |||||||    
T  116721 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcttatttatagggacctaaaacataatta 116626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 280 - 371
Target Start/End: Original strand, 32148102 - 32148193
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    ||||||| |||||||| |||||| |||||||||||||| ||| | | |||||||||   || ||||||||||||| || ||| |||||||||    
T  32148102 aaaaaacgttgaggacaaaaaatttaataaaatttaaacaggaactaatgttggaaatacgcctatttatagggacctaaaacataattaac 32148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 117948 - 118030
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||| |||||| ||||||||||||| ||| || | ||||||||| | || ||||||||||||| || ||| ||||||||||||    
T  117948 ggaccaaaaatttaataaaatttaagtagagactaatgttggaaacacgcctatttatagggacctaaaacataattaaccct 118030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 374
Target Start/End: Complemental strand, 19825372 - 19825279
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||| |||| |||||| |||| |||||||| ||| || | ||||||||  | |||||||||||||||| |||| | ||||||||||||    
T  19825372 aaaaacgttggggaccaaaaatttaattaaatttaagtagagactaatgttggagacacgtctatttatagggaccttagacataattaaccct 19825279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 377
Target Start/End: Original strand, 41786578 - 41786675
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaat 377  Q
    ||||||| ||| |||  |||||| ||||||||||||| |||||| | ||||||||| |    ||||||| |||||||| ||| |||||||||||||||    
T  41786578 aaaaaacgttggggatcaaaaatttaataaaatttaagtagggaataatgttggaaacaaacctatttacagggatctaaaacataattaaccctaat 41786675  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 369
Target Start/End: Complemental strand, 54185393 - 54185304
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataatta 369  Q
    ||||||| ||| |||| |||||| ||||||||||||| |||| | | ||||||||| |||| ||||||||| ||| || ||| |||||||    
T  54185393 aaaaaacgttgtggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacgcgcctatttataaggacctaaaacataatta 54185304  T

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Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 25233404 - 25233480
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||||| ||||||||||||||||||||   ||||||||||| ||  ||||| |||||| |||||| |||| ||||||    
T  25233404 aaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttgtagggaccttaaacataagtaaccc 25233480  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 375
Target Start/End: Complemental strand, 44555720 - 44555592
Alignment:
Q  247 aatttaacggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatt 346  Q
    ||||| ||||||| |||||||  | ||||||| ||||||  ||| |||  |||||  ||||||||||||||||| ||   ||||||||||| |   ||||    
T  44555720 aatttgacggcaaggaccaaacttacaaacggaaaaaaatgttggggatgaaaaacttaataaaatttaaatagagaccaatgttggaagcccacttatt 44555621  T
Q  347 tatagggatcttaaatataattaacccta 375  Q
    |||| |||  |||||||||||||||||||    
T  44555620 tatatggactttaaatataattaacccta 44555592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 45234513 - 45234415
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||  |||||| ||||||||||||| |||||| | ||||||||| |||  ||||||||| ||| || ||| |||||||||||    
T  45234513 aacggaaaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttata-ggacctaaaacataattaaccc 45234415  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 370
Target Start/End: Original strand, 8576431 - 8576521
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaa 370  Q
    ||||||| ||| |||  |||||| |||||||||||||||||||| | |||||||||||  |  ||||| || ||| |||||| ||||||||    
T  8576431 aaaaaacgttggggaagaaaaatttaataaaatttaaatagggactaatgttggaagcttgcttatttgtacggaccttaaacataattaa 8576521  T

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Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 19831134 - 19831208
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    |||||| ||||||||||||| |||||| | ||||||||| | |   |||||||||||| |||||| |||||||||    
T  19831134 aaaaatttaataaaatttaagtagggactaatgttggaaacacacttatttatagggaccttaaacataattaac 19831208  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 33476681 - 33476775
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    ||||||| ||| |||  |||||| ||||||||||||||||||||   || ||| |||| ||  ||||||||| || |||||| ||||||||||||    
T  33476681 aaaaaacgttggggaggaaaaatttaataaaatttaaatagggaccaatattgaaagctcgcttatttatagagaccttaaacataattaaccct 33476775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 354
Target Start/End: Complemental strand, 37178730 - 37178656
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttataggga 354  Q
    ||||||| ||| |||  |||||| ||||||||||||| || ||||| ||||||||| | || |||||||||||||    
T  37178730 aaaaaacgttggggatcaaaaatttaataaaatttaagtatggattaatgttggaaacacgcctatttataggga 37178656  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 373
Target Start/End: Complemental strand, 52700939 - 52700838
Alignment:
Q  272 caaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    ||||||| ||||||| ||| |||  |||||| ||||||||||| | |||| ||  ||||||||||| ||  ||||| || ||| |||||| |||||||||    
T  52700939 caaacggaaaaaaacgttggggatgaaaaatttaataaaattttagtaggaatcaatgttggaagctcgcttatttgtaaggaccttaaacataattaac 52700840  T
Q  372 cc 373  Q
    ||    
T  52700839 cc 52700838  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 31992189 - 31992265
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||||| |||||||||||||||||| ||  |||||| |||| ||  ||||| |||||| | |||| |||||||||||    
T  31992189 aaaaatttaataaaatttaaataggaatcaatgttgaaagctcgcttatttgtagggaccataaacataattaaccc 31992265  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 32944110 - 32944206
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    ||||||| || || || |||||| ||||||||||||| ||| || | |||||  || || | ||||||||||||| || ||| ||||||||||||||    
T  32944110 aaaaaacgttaagaaccaaaaatttaataaaatttaagtagagactaatgttaaaaacgtgcctatttatagggacctaaaacataattaaccctaa 32944206  T

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Target: chr8 (Bit Score: 56; Significance: 8e-23; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 274 - 385
Target Start/End: Original strand, 13324048 - 13324159
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||||||| |||  |||||| ||||||||||||| |||||| | ||||||||| |||| ||||||||||||| || ||| |||||||||||    
T  13324048 aacggaaaaaaacattggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaaccc 13324147  T
Q  374 taatatttatga 385  Q
    ||| ||||||||    
T  13324148 taaaatttatga 13324159  T

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Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 274 - 374
Target Start/End: Original strand, 39338016 - 39338116
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||| | || |||||||||||||||| ||| |||||||||||    
T  39338016 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggatctaaaacataattaaccc 39338115  T
Q  374 t 374  Q
    |    
T  39338116 t 39338116  T

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Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 247 - 373
Target Start/End: Original strand, 32244889 - 32245015
Alignment:
Q  247 aatttaacggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatt 346  Q
    ||||| |||||||||||||||  || |||||  ||||||| |||||||  |||||| |||||||||||||||||||||  || |||||||| ||| ||||    
T  32244889 aatttgacggcaatgaccaaacttgtaaacgaaaaaaaacgttgaggatgaaaaatttaataaaatttaaatagggatcaatattggaagctcgtttatt 32244988  T
Q  347 tatagggatcttaaatataattaaccc 373  Q
    |||| | |  ||||| |||||||||||    
T  32244989 tataagaactttaaacataattaaccc 32245015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 16472782 - 16472689
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||||||| ||   |||||| ||||||||||||| |||||| | ||||||||| |||| ||||||||||||| || |||||||||||||||    
T  16472782 aaaaaacattgggggtcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaatataattaaccc 16472689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 16477353 - 16477260
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||||||| ||   |||||| ||||||||||||| |||||| | ||||||||| |||| ||||||||||||| || |||||||||||||||    
T  16477353 aaaaaacattgggggtcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaatataattaaccc 16477260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 281 - 374
Target Start/End: Complemental strand, 42816107 - 42816014
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||||| ||  |||||||||||| |||||| ||||||||||||    
T  42816107 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaagcacgcgtatttatagggaccttaaacataattaaccct 42816014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 281 - 376
Target Start/End: Complemental strand, 39308367 - 39308272
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    |||||| ||| |||| |||||| ||||||||||||| |||||| | | |||| || | |||||||||||||||| |||||| ||||||||||||||    
T  39308367 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaaggttgaaaacacgtctatttatagggaccttaaacataattaaccctaa 39308272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 6243276 - 6243206
Alignment:
Q  253 acggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaataggga 323  Q
    |||||||||||||||| | |||||||  ||||||||||||||  |||||| ||||||||||||||||||||    
T  6243276 acggcaatgaccaaatttacaaacggataaaaacattgaggatgaaaaatttaataaaatttaaataggga 6243206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 376
Target Start/End: Complemental strand, 13322982 - 13322880
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||| |  | ||||||||||||| || ||| |||||||||||    
T  13322982 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacatgcctatttatagggacctaaaacataattaaccc 13322883  T
Q  374 taa 376  Q
    |||    
T  13322882 taa 13322880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 24451270 - 24451176
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    ||||||| ||| |||  |||||| ||||||||||||| |||||| | ||||||||| | || ||||||||||||| || ||||||||||||||||    
T  24451270 aaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaatataattaaccct 24451176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 37705926 - 37705832
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    ||||||| ||| |||| |||||| ||||||||||||| |||||| | |||||| || |||| ||||||||||||| || ||| ||||||||||||    
T  37705926 aaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaaccct 37705832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 375
Target Start/End: Original strand, 22959782 - 22959867
Alignment:
Q  290 gaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacccta 375  Q
    ||||||||||||| || |||| |||||||||| | | ||||| ||| | |||||||||||||||| |||||| |||||||||||||    
T  22959782 gaggactaaaaatttattaaattttaaataggaactaatgttagaaacacgtctatttatagggaccttaaacataattaacccta 22959867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 374
Target Start/End: Original strand, 42817211 - 42817304
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||||||| |||| |||||| | ||||||| ||| |||||| | ||||||||| | || ||||||||||||| |||||| ||||||||||||    
T  42817211 aaaaacattggggacaaaaaatttcataaaatataagtagggactaatgttggaaacacgcctatttatagggaccttaaacataattaaccct 42817304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 374
Target Start/End: Original strand, 37707220 - 37707320
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||  |||||| ||||||||||||| |||||| | ||||||||| |||| || |||||||||| || ||| |||||||||||    
T  37707220 aacggaaaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctgtttatagggacctaaaacataattaaccc 37707319  T
Q  374 t 374  Q
    |    
T  37707320 t 37707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 45023325 - 45023367
Alignment:
Q  282 aaaacattgaggactaaaaatataataaaatttaaatagggat 324  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  45023325 aaaacgttgaggactaaaaatataataaaatttaaatagggat 45023367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 21575583 - 21575506
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||||||||||||| |||| | | ||||||||| |||||||||||||| ||| || ||| ||||||||||||    
T  21575583 aaaaatttaataaaatttaagtaggaactaatgttggaaacgcgtctatttataaggacctaaaacataattaaccct 21575506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 39336796 - 39336711
Alignment:
Q  290 gaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacccta 375  Q
    |||||| |||||| ||||||||||||| |||||  | |||||||||  ||| ||||||||||||| || ||| |||||||||||||    
T  39336796 gaggaccaaaaatttaataaaatttaagtagggtctaatgttggaaatgcgcctatttatagggacctaaaacataattaacccta 39336711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 21136461 - 21136540
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    |||||| ||||||||||||| |||||| | ||||||||| | || ||||||||||||| || ||| |||||||| |||||    
T  21136461 aaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaatcctaa 21136540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 382
Target Start/End: Original strand, 3866855 - 3866991
Alignment:
Q  247 aatttaacggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatt 346  Q
    ||||| ||||||| |||||||  | ||||||| ||||||| ||| |||  |||||| ||||||||||||||||||||   |||||| |||| |   ||||    
T  3866855 aatttgacggcaaggaccaaacttacaaacgg-aaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatt 3866953  T
Q  347 --tatagggatcttaaatataattaaccctaatattta 382  Q
      ||||||||  |||||||||||||||||||| |||||    
T  3866954 tatatagggactttaaatataattaaccctaaaattta 3866991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 36062581 - 36062499
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||| |||||| ||||||||||||||||| || | |||||| || |||| ||||||||| ||| || ||| ||||||||||||    
T  36062581 ggaccaaaaatttaataaaatttaaatagagactaatgttgaaaacgcgcctatttataaggacctaaaacataattaaccct 36062499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 383
Target Start/End: Original strand, 39310623 - 39310725
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaatatt 380  Q
    |||||| ||| |||| ||||||  |||||||||||| |||| ||| |||||| || || | |||||| |||||| |||||| ||||||||||||  ||||    
T  39310623 aaaaacgttggggaccaaaaattaaataaaatttaagtaggaattaatgttgaaaacgtgcctatttctagggaccttaaacataattaacccttttatt 39310722  T
Q  381 tat 383  Q
    |||    
T  39310723 tat 39310725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 374
Target Start/End: Complemental strand, 41280283 - 41280183
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| |||  ||| |||||| ||||||||||||| ||   | | ||||||||| |||| ||||||||||| |||| ||| |||||||||||    
T  41280283 aacggaaaaaaacgttggagaccaaaaatttaataaaatttaagtaaatactaatgttggaaacgcgcctatttataggaatctaaaacataattaaccc 41280184  T
Q  374 t 374  Q
    |    
T  41280183 t 41280183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 274 - 376
Target Start/End: Complemental strand, 1692684 - 1692582
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||||| |  ||||| || | || |||||||||| || || | | |||||||||||    
T  1692684 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactactgttgaaaacacgcctatttatagagacctaatacataattaaccc 1692585  T
Q  374 taa 376  Q
    |||    
T  1692584 taa 1692582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 370
Target Start/End: Complemental strand, 32243447 - 32243357
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaa 370  Q
    ||||||| ||| |||  |||||| ||||||||||||||||||||   |||||| |||| ||  ||||||||| || |||||| ||||||||    
T  32243447 aaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttgaaagctcgcttatttatagagaccttaaacataattaa 32243357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 24452597 - 24452694
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    ||||| ||||||| | | |||| |||||  ||||||||||||| |||||| | ||||||||| | || |||||||||||||  | ||| |||||||||    
T  24452597 aacggaaaaaaacgtcggggaccaaaaaattaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacttaaaacataattaac 24452694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 44893608 - 44893531
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||||||||||| |||| |||   ||||||||||| ||  ||||| |||||| |||||| ||||||||||||    
T  44893608 aaaaatttaataaaattttaatatggaccaatgttggaagctcgcttatttgtagggaccttaaacataattaaccct 44893531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 3865458 - 3865362
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    ||||||| ||| |||  |||||| ||||||||||||||| ||||   |||||| |||| ||  |||||||||| |  ||||| ||||||||||||||    
T  3865458 aaaaaacgttggggatgaaaaatttaataaaatttaaattgggaccaatgttgaaagctcgcttatttataggaactttaaacataattaaccctaa 3865362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 45046734 - 45046816
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaatat 379  Q
    |||||| ||||||||||||| |||||| | ||||||||| |||||||||||||||||| |||||| |||||||||||||||||    
T  45046734 aaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggaccttaaagataattaaccctaatat 45046816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 281 - 374
Target Start/End: Complemental strand, 45045292 - 45045199
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||||| |||||||||||||||||||||||||||||||||| | |||||||||  |||  |||||||||| |  ||||| ||||||||||||    
T  45045292 aaaaacatcgaggactaaaaatataataaaatttaaatagggactaatgttggaaatgcgcatatttataggaactttaaacataattaaccct 45045199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 280 - 373
Target Start/End: Original strand, 10322821 - 10322914
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||||||| |||| |||||| ||||||||||||| |||||| | ||||||||| | || ||||||||||||| || ||| |||||||||||    
T  10322821 aaaaaacattggggaccaaaaatttaataaaatttaagtagggactaatgttggaaactcgcctatttatagggacctaaaacataattaaccc 10322914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 247 - 376
Target Start/End: Complemental strand, 28163037 - 28162908
Alignment:
Q  247 aatttaacggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatt 346  Q
    ||||| ||||||| |||||||  | ||||||| ||||||| ||| |||  |||||| ||||||||||| |||||||||  ||||||||||| ||  ||||    
T  28163037 aatttgacggcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattttaatagggatcaatgttggaagctcgcttatt 28162938  T
Q  347 tatagggatcttaaatataattaaccctaa 376  Q
    | ||| || |||||| ||||||||||||||    
T  28162937 tgtagagaccttaaacataattaaccctaa 28162908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 25244100 - 25244180
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttataggga 354  Q
    ||||| |||||||| ||||||  |||||| |||||||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  25244100 aacggaaaaaaacactgaggataaaaaatttaataaaatttaaataggaattaatgttggaaacgcgcctatttataggga 25244180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 274 - 378
Target Start/End: Complemental strand, 44208673 - 44208569
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||||| | |||||| || ||||||||||||||  || || ||| |||||||||||    
T  44208673 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgtctatttataaagacctaaaacataattaaccc 44208574  T
Q  374 taata 378  Q
    |||||    
T  44208573 taata 44208569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 31318058 - 31318153
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacccta 375  Q
    ||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||| ||| |||| ||||||||||||| || ||| |||||||||||||    
T  31318058 aaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttagaaacgcgcctatttatagggacctaaaacataattaacccta 31318153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 34513530 - 34513651
Alignment:
Q  253 acggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagg 352  Q
    ||||||| |||||||  | ||||||| ||||||| ||| |||  |||||| ||||||||||| ||||||||   ||||||||||| ||  ||||| ||||    
T  34513530 acggcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattttaatagggaccaatgttggaagctcgcttatttgtagg 34513629  T
Q  353 gatcttaaatataattaaccct 374  Q
    || |||||| ||||||||||||    
T  34513630 gaccttaaacataattaaccct 34513651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 374
Target Start/End: Complemental strand, 11669918 - 11669818
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| | |||||| ||| || |||||||||||||||||||| | ||||||||| |||| || |||||||||| || ||| | |||||||||    
T  11669918 aacggaaaaaaacgtcgaggaccaaatatttaataaaatttaaatagggactaatgttggaaacgcgcctttttatagggacctaaaacacaattaaccc 11669819  T
Q  374 t 374  Q
    |    
T  11669818 t 11669818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 374
Target Start/End: Complemental strand, 33688473 - 33688373
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||| | | ||||||||| |||  ||||||||||||| || ||| |||||||||||    
T  33688473 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacgcacctatttatagggacctaaaacataattaaccc 33688374  T
Q  374 t 374  Q
    |    
T  33688373 t 33688373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 281 - 373
Target Start/End: Original strand, 40171403 - 40171495
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| |||| |||| |||||| ||||||||||||| ||| |||| ||||||||| |||  |||||||||| || |||||| |||||||||||    
T  40171403 aaaaatattggggacaaaaaatttaataaaatttaagtagagattaatgttggaaacgcacctatttatagagaccttaaacataattaaccc 40171495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 35054976 - 35054882
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    ||||||| ||| |||| |||||| ||||||||||||| |||| | | |||||| ||  ||||||||||||||||| || ||| ||||||||||||    
T  35054976 aaaaaacgttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaatgcgtctatttatagggacctaaaacataattaaccct 35054882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 13086413 - 13086526
Alignment:
Q  261 gaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaa 360  Q
    ||||||||  || |||||| |||||| | |||||| |||||| ||||||||||||| | |||| | |||||| ||  ||| ||||||||||| | |||||    
T  13086413 gaccaaattcgctaacggccaaaaacgtggaggaccaaaaatttaataaaatttaagttgggactaatgttgaaaatgcgcctatttataggaaccttaa 13086512  T
Q  361 atataattaaccct 374  Q
    | ||||||||||||    
T  13086513 acataattaaccct 13086526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 35061335 - 35061411
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||||| ||||||||||||| |||||| | |||||| || |||| ||||||||||||| || ||| |||||||||||    
T  35061335 aaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaaccc 35061411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 10321448 - 10321394
Alignment:
Q  327 atgttggaagcgcgtctatttatagggatcttaaatataattaaccctaatattt 381  Q
    ||||||||| |||| |||||||||||||||| ||| ||||||||||||| |||||    
T  10321448 atgttggaaacgcgcctatttatagggatctaaaacataattaaccctattattt 10321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 352
Target Start/End: Original strand, 25423182 - 25423259
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagg 352  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||| |||| |||||||||||    
T  25423182 aacggaaaaaaacgttg-ggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagg 25423259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 15562720 - 15562628
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||| ||| |||| ||||||  |||||| ||||| |||||| | ||||||||| |||| ||||||||||||| || ||| |||||||||||    
T  15562720 aaaaaacgttggggaccaaaaattcaataaa-tttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaaccc 15562628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 368
Target Start/End: Complemental strand, 31316313 - 31316242
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataatt 368  Q
    |||||| ||||||||||||| |||||| | ||||||||| |||  ||||||||| |||||| ||| ||||||    
T  31316313 aaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttataaggatctaaaacataatt 31316242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 40170161 - 40170070
Alignment:
Q  282 aaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||| ||||| |||||||||||||||||||||| ||| | ||||||||| |  | |||||| || ||| || ||| |||||||||||    
T  40170161 aaaacgttggggactgaaaatataataaaatttaaatatggactaatgttggaaacaagcctatttgtaaggacctaaaacataattaaccc 40170070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 34512320 - 34512226
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    ||||||||||| |||  |||||| ||||||||||| ||||||||   |||||| |||| ||  ||||| |||||| |||||| |||| |||||||    
T  34512320 aaaaaacattggggatgaaaaatttaataaaattttaatagggaacaatgttgaaagctcgcttatttgtagggaccttaaacataactaaccct 34512226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 376
Target Start/End: Complemental strand, 48738286 - 48738182
Alignment:
Q  272 caaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    ||||||| ||||||| ||| |||  |||||| ||||||||||| | || ||||  |||||| |||| ||  ||||| |||||| |||||| || ||||||    
T  48738286 caaacggaaaaaaacgttggggaagaaaaatttaataaaattttagtacggatcaatgttgaaagctcgcttatttgtagggaccttaaacatgattaac 48738187  T
Q  372 cctaa 376  Q
    |||||    
T  48738186 cctaa 48738182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 23318020 - 23318133
Alignment:
Q  261 gaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaa 360  Q
    |||||| | ||||||||||||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||| | || ||||||||||||| || ||    
T  23318020 gaccaagtttgcaaacggcaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaa 23318119  T
Q  361 atataattaaccct 374  Q
    | ||||||||||||    
T  23318120 acataattaaccct 23318133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 41140118 - 41140219
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||||||| |||| |||||| ||||||||||||| |||||| | ||||||||| |||| ||||||||||||| || ||| |||||||||||    
T  41140118 aacggaaaaaaacattggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaaccc 41140217  T
Q  374 ta 375  Q
    ||    
T  41140218 ta 41140219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 274 - 373
Target Start/End: Original strand, 13921150 - 13921249
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||||||| |||| |||||| |||||||||||||||||||| | ||||||||| |||| ||||||||| ||| || ||| |||||||||||    
T  13921150 aacggaaaaaaacattggggaccaaaaatttaataaaatttaaatagggactaatgttggaaacgcgcctatttataaggacctaaaacataattaaccc 13921249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 23312759 - 23312658
Alignment:
Q  270 tgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataatta 369  Q
    |||||||||||||||| |||| |||| |||||| ||||||||||||| |||| ||| ||||||||| | || ||||||||||||| || ||| |||||||    
T  23312759 tgcaaacggcaaaaaatattggggaccaaaaatttaataaaatttaagtaggaattaatgttggaaacacgcctatttatagggacctaaaacataatta 23312660  T
Q  370 ac 371  Q
    ||    
T  23312659 ac 23312658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 41138818 - 41138725
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||||||| |||| |||||| ||||||||||||| |||||| | ||||||||  |||| ||||||||||||| || ||| |||||||||||    
T  41138818 aaaaaacattggggaccaaaaatttaataaaatttaagtagggactaatgttggagacgcgcctatttatagggacctaaaacataattaaccc 41138725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 274 - 374
Target Start/End: Original strand, 34527599 - 34527698
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||||||| |||| |||||| ||||||||||||| |||| ||| ||||||||| | || |||||||||| ||||| ||| |||||||||||    
T  34527599 aacggaaaaaaacattg-ggaccaaaaatttaataaaatttaagtaggaattaatgttggaaacacgcctatttatagagatctaaaacataattaaccc 34527697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 378
Target Start/End: Complemental strand, 37812062 - 37811956
Alignment:
Q  272 caaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    ||||||| ||||||| ||| |||  |||||| ||||||||||| | ||||||   ||||||||||| ||  ||||| |||||| |||||| |||||||||    
T  37812062 caaacggaaaaaaacgttggggatgaaaaatttaataaaattttagtagggaccaatgttggaagctcgcttatttgtagggaccttaaacataattaac 37811963  T
Q  372 cctaata 378  Q
    |||||||    
T  37811962 cctaata 37811956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 373
Target Start/End: Complemental strand, 40272260 - 40272134
Alignment:
Q  247 aatttaacggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatt 346  Q
    ||||| ||||||| || ||||  || |||||  ||||||| |||||||  |||||| |||||||||||||||||||||  ||||||||||| | | ||||    
T  40272260 aatttgacggcaaggatcaaacttgtaaacgaaaaaaaacgttgaggatgaaaaatttaataaaatttaaatagggatcaatgttggaagctcatttatt 40272161  T
Q  347 tatagggatcttaaatataattaaccc 373  Q
    |||| | |  ||||| |||||||||||    
T  40272160 tataagaactttaaacataattaaccc 40272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 374
Target Start/End: Original strand, 26866198 - 26866275
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||||||||||||| |||||| | ||||||||| | || ||||||||||||| || ||| ||||||||||||    
T  26866198 aaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaaccct 26866275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 380
Target Start/End: Original strand, 19193063 - 19193139
Alignment:
Q  304 taataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaatatt 380  Q
    ||||| ||||| |||||||||| ||||||||||| ||  ||||| ||||   |||||| ||||||||||||||||||    
T  19193063 taatataattttaatagggattaatgttggaagctcgcttatttgtaggatccttaaacataattaaccctaatatt 19193139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 26865029 - 26864933
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaa 370  Q
    ||||| ||||||| ||| |||| ||||||  |||||||||||| |||||| | ||||| ||| ||||  |||||||||||| || ||| ||||||||    
T  26865029 aacggaaaaaaacgttggggaccaaaaattgaataaaatttaagtagggactaatgttagaaacgcgcttatttatagggacctaaaacataattaa 26864933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 38693959 - 38694034
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    |||||| ||||||||||||| | |||||| || |||||| | || ||||||||||||| || ||| ||||||||||    
T  38693959 aaaaatttaataaaatttaagtggggattaatattggaaacacgcctatttatagggacctaaaacataattaacc 38694034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 373
Target Start/End: Complemental strand, 9168531 - 9168465
Alignment:
Q  307 taaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||||||||||||||||   ||||||||||| ||  ||||||||||||  ||||| |||||||||||    
T  9168531 taaaatttaaatagggaccaatgttggaagctcgcttatttatagggactttaaacataattaaccc 9168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 34526802 - 34526720
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||| |||||| ||||||||||||| |||  ||| ||||||||| | || ||||||||||||| || ||| ||||| ||||||    
T  34526802 ggaccaaaaatttaataaaatttaagtagaaattaatgttggaaacacgcctatttatagggacctaaaacataatcaaccct 34526720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 374
Target Start/End: Original strand, 37813265 - 37813342
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||||||||||| |||||| |   ||||||||||| ||  ||||| || |||||||||| ||||||||||||    
T  37813265 aaaaatttaataaaattttaataggaaacaatgttggaagctcgcttatttgtaaggatcttaaacataattaaccct 37813342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 43440029 - 43439949
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    |||| |||||| ||||||||||||| |||| | | |||||| || | || ||||||||||||| || ||| ||||||||||    
T  43440029 ggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacgcctatttatagggacctaaaagataattaacc 43439949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 3e-19; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 12622071 - 12622191
Alignment:
Q  253 acggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagg 352  Q
    ||||||| |||||||  | ||||||| |||||||||||||||  |||||| ||||||||||||||||||||   |||||| |||| ||  ||||||||||    
T  12622071 acggcaaggaccaaacttacaaacggaaaaaaacattgaggatgaaaaatttaataaaatttaaatagggaccaatgttgaaagctcgcttatttatagg 12622170  T
Q  353 gatcttaaatataattaaccct 374  Q
    || |||||| ||||||||||||    
T  12622171 ga-cttaaagataattaaccct 12622191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 38198860 - 38198761
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||||| | |||| |||||| |||||||||||||||||||| | ||||||||| | || ||||||||||||| || ||| |||||||||||    
T  38198860 aacggaaaaaaacatcggggaccaaaaatttaataaaatttaaatagggactaatgttggaaacacgcctatttatagggacctaaaacataattaaccc 38198761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 274 - 376
Target Start/End: Original strand, 33625903 - 33626005
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||| | | ||| ||||| | |||||||||||||||| || ||| |||||||||||    
T  33625903 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtaggaactaatgatggaaacacgtctatttatagggacctaaaacataattaaccc 33626002  T
Q  374 taa 376  Q
    |||    
T  33626003 taa 33626005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 281 - 375
Target Start/End: Original strand, 43831953 - 43832047
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacccta 375  Q
    |||||| ||| |||| |||||| ||||||||||||| |||||| | |||||| || |||| |||||||||| || |||||| |||||||||||||    
T  43831953 aaaaacgttggggacaaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagagaccttaaacataattaacccta 43832047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 281 - 373
Target Start/End: Original strand, 38875063 - 38875155
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||||| ||| |||| |||||| ||||||||||||| ||| || | ||||||||||| ||  |||||||||||| |||||| |||||||||||    
T  38875063 aaaaacgttggggaccaaaaatttaataaaatttaagtagagactaatgttggaagcacgcttatttatagggaccttaaacataattaaccc 38875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 372
Target Start/End: Original strand, 8082754 - 8082873
Alignment:
Q  253 acggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagg 352  Q
    ||||||| |||||||  | ||||||| ||||||| ||| |||  |||||| ||||||||||| ||||||||   |||||| |||| ||  ||||| ||||    
T  8082754 acggcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattttaatagggaccaatgttgaaagctcgcttatttgtagg 8082853  T
Q  353 gatcttaaatataattaacc 372  Q
    ||||||||| ||||||||||    
T  8082854 gatcttaaacataattaacc 8082873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 281 - 374
Target Start/End: Complemental strand, 46043458 - 46043365
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||| ||||  |||||||||| | || ||| ||||||||||||    
T  46043458 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcatatttataggaacctaaaacataattaaccct 46043365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 373
Target Start/End: Complemental strand, 43308547 - 43308455
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||||| ||| |||| |||||| ||||||||||||| | |||| | |||||| || | |||||||||||| ||| |||||| |||||||||||    
T  43308547 aaaaacgttggggaccaaaaatttaataaaatttaagttgggactgatgttgaaaacacgtctatttataaggaccttaaacataattaaccc 43308455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 375
Target Start/End: Original strand, 43309636 - 43309714
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacccta 375  Q
    |||||| ||||||||||||| ||| |||| |||||| || | || ||||||||||||| |||||| || ||||||||||    
T  43309636 aaaaatttaataaaatttaagtagagattaatgttgaaaacacgcctatttatagggaccttaaacatgattaacccta 43309714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 46331887 - 46331962
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||||| ||||||||||||| |||||| | ||||||||| |||| ||||||| | ||| || |||||||||||||||    
T  46331887 aaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttaca-ggacctaaaatataattaaccc 46331962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 8081578 - 8081483
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacccta 375  Q
    ||||||| ||| |||  |||||| ||||||||||| ||||||||   ||||| ||||| ||  ||||| |||||| |||||| |||||||||||||    
T  8081578 aaaaaactttggggatgaaaaatttaataaaattttaatagggaccaatgtttgaagctcgcttatttgtagggaccttaaacataattaacccta 8081483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 379
Target Start/End: Original strand, 38595518 - 38595617
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaatat 379  Q
    ||||||| ||| |||  |||||| ||||| ||||| |||||||||  ||||||||||| |   ||||| |||||| |||||| |||||||||||| ||||    
T  38595518 aaaaaacgttggggatgaaaaatttaatataattttaatagggatcaatgttggaagctcacttatttgtagggaccttaaacataattaacccttatat 38595617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 44166918 - 44166843
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    |||||| ||||||||||||| |||||||| ||||| ||| |||| ||||||||  | | || ||||||||||||||    
T  44166918 aaaaatttaataaaatttaagtagggattaatgttagaaacgcgcctatttattagaacctaaaatataattaacc 44166843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 43830727 - 43830653
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    |||||| ||||||||||||| |||||| | |||||| || |||  ||||||||||||  |||||| |||||||||    
T  43830727 aaaaatttaataaaatttaagtagggactaatgttgaaaacgcacctatttataggggccttaaacataattaac 43830653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 375
Target Start/End: Complemental strand, 3495456 - 3495356
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| | | |||| |||||| ||||||||||||| |||||| | |||||  || |||||||||||||| | | || ||| |||||||||||    
T  3495456 aacggaaaaaaacgtcggggaccaaaaatttaataaaatttaagtagggactaatgtt-aaaacgcgtctatttataagcacctaaaacataattaaccc 3495358  T
Q  374 ta 375  Q
    ||    
T  3495357 ta 3495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 373
Target Start/End: Complemental strand, 38873946 - 38873881
Alignment:
Q  308 aaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||||| |||||| | |||||| ||  ||| ||||||||||||| |||||| |||||||||||    
T  38873946 aaaatttaagtagggactaatgttgaaaatgcgcctatttatagggaccttaaacataattaaccc 38873881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 40303870 - 40303777
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||| ||| |||  |||||| ||||||||||||||||||||   |||||||||||  |  ||||| |||| | |||||| |||||||||||    
T  40303870 aaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttggaagcttgcttatttgtaggaaccttaaacataattaaccc 40303777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 373
Target Start/End: Original strand, 43084353 - 43084434
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||| |||||| ||||||||||||| |||| | | ||||||||| | || |||||||||| || || ||| |||||||||||    
T  43084353 ggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacacgcctatttatagagacctaaaacataattaaccc 43084434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 373
Target Start/End: Complemental strand, 45957886 - 45957805
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||| |||||| ||||||||||||| |||||  | |||||| || | || ||||||||||||| || ||| |||||||||||    
T  45957886 ggaccaaaaatttaataaaatttaagtaggggctaatgttgaaaacacgcctatttatagggacctaaaacataattaaccc 45957805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 3e-19; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 281 - 378
Target Start/End: Original strand, 21795897 - 21795994
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaata 378  Q
    |||||||||| |||| |||||| ||||||||||||| |||||| | |||||| || | |||||||||||||||| |||||| |||||| |||||||||    
T  21795897 aaaaacattggggaccaaaaatttaataaaatttaagtagggactgatgttgtaaacacgtctatttatagggaccttaaacataatttaccctaata 21795994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 374
Target Start/End: Original strand, 12251855 - 12251982
Alignment:
Q  247 aatttaacggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatt 346  Q
    ||||| ||||||| |||||||  | ||||||| ||||||| ||| |||  |||||| ||||||||||||||||||||   ||||||||||| ||  ||||    
T  12251855 aatttgacggcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatt 12251954  T
Q  347 tatagggatcttaaatataattaaccct 374  Q
    ||||||||  ||||| ||||||||||||    
T  12251955 tatagggactttaaacataattaaccct 12251982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 36248131 - 36248032
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| | | |||| |||||| ||||||||||||| |||||| | ||||||||| |||||||||||||||||| || ||| |||||||||||    
T  36248131 aacggaaaaaaacgtcggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggacctaaaacataattaaccc 36248032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 272 - 376
Target Start/End: Complemental strand, 51839995 - 51839891
Alignment:
Q  272 caaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    ||||||| ||||||||||| |||  |||||| ||||||||||||||||||||   ||||||||||| ||  ||||||||||||  ||||| ||||||||     
T  51839995 caaacggaaaaaaacattggggatgaaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttatagggactttaaacataattaat 51839896  T
Q  372 cctaa 376  Q
    |||||    
T  51839895 cctaa 51839891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 376
Target Start/End: Original strand, 27551993 - 27552116
Alignment:
Q  253 acggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagg 352  Q
    ||||||| |||||||  | ||||||| ||||||| ||| |||  |||||| ||||||||||||||||||||   |||||  |||| ||  ||||||||||    
T  27551993 acggcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttaaaagctcgcttatttatagg 27552092  T
Q  353 gatcttaaatataattaaccctaa 376  Q
    || |||||| ||||||||||||||    
T  27552093 gaccttaaacataattaaccctaa 27552116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 292 - 373
Target Start/End: Original strand, 37987209 - 37987290
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||| |||||| ||||||||||||| |||||| | ||||||||| |||| ||||||||||||| || ||| |||||||||||    
T  37987209 ggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaaccc 37987290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 12368726 - 12368806
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    |||| |||||| ||||||||||||| |||||| | ||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  12368726 ggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaacc 12368806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 21794870 - 21794779
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    ||||||||||| |||| |||||| ||||||||||||| ||||| || ||||||||| | || ||||||| ||||| |||||| ||||||||||    
T  21794870 aaaaaacattggggaccaaaaatttaataaaatttaagtaggggttaatgttggaaacacggctattta-agggaccttaaacataattaacc 21794779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 374
Target Start/End: Complemental strand, 25351747 - 25351646
Alignment:
Q  272 caaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    ||||||| ||||||||||| | |  |||||| ||||||||||| ||||||||   ||||||||||| ||| ||||| |||||| |||||| |||||||||    
T  25351747 caaacggaaaaaaacattgggaataaaaaatttaataaaattttaatagggaccaatgttggaagctcgtttatttgtaggga-cttaaacataattaac 25351649  T
Q  372 cct 374  Q
    |||    
T  25351648 cct 25351646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 36362270 - 36362176
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    ||||||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||| |  | ||||||||| | | || ||| ||||||||||||    
T  36362270 aaaaaacgttggggactaaaaatttaataaaatttaaatggggattaatgttggaaacatgcctatttataagaacctaaaacataattaaccct 36362176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 374
Target Start/End: Original strand, 12898910 - 12898987
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| |||||||||||||||||| |   ||||||||||| ||  |||||||||||| |||||| ||||||||||||    
T  12898910 aaaaatttaataaaatttaaataggaaccaatgttggaagctcgcttatttatagggaccttaaacataattaaccct 12898987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 29232165 - 29232241
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||||| ||||||||||||| |||||||| |||||||||   || ||||||||||||| || ||| |||||||||||    
T  29232165 aaaaatttaataaaatttaagtagggattaatgttggaaatacgcctatttatagggacctaaaacataattaaccc 29232241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 374
Target Start/End: Complemental strand, 30981547 - 30981448
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||| |||| |||| ||| |||| || ||| |||||||||||    
T  30981547 aacggaaaaaaacgttg-ggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatatatcgggacctaaaacataattaaccc 30981449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 49768896 - 49768972
Alignment:
Q  247 aatttaacggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaataggga 323  Q
    ||||| ||||||| |||||||  | ||||||| ||||||| |||||||  |||||| ||||||||||||||||||||    
T  49768896 aatttgacggcaaggaccaaacttacaaacggaaaaaaacgttgaggatgaaaaatttaataaaatttaaataggga 49768972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 51338232 - 51338140
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    |||||||||||  ||  |||||| |||||||||||||||||| |   ||||||||| | ||  ||||| ||||||||||||||||||||||||    
T  51338232 aaaaaacattggagatgaaaaatttaataaaatttaaataggaaccaatgttggaaactcgcttatttgtagggatcttaaatataattaacc 51338140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 15053444 - 15053345
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| | | |||| ||| || ||||||||||||| |||||| | |||||| || |||| ||||||||||||| || ||| |||||||||||    
T  15053444 aacggaaaaaaacgtcggggaccaaatatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaaccc 15053345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 383
Target Start/End: Complemental strand, 27550547 - 27550461
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaatatttat 383  Q
    |||||| |||||||||||||||||||||  ||||||||||| |   |||||||||| |  ||||| ||||||||||||  |||||||    
T  27550547 aaaaatttaataaaatttaaatagggatcaatgttggaagctcacttatttataggtactttaaacataattaacccttttatttat 27550461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 33708111 - 33708018
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||| ||| |||| |||||| ||||||||||||| || ||| | ||||||||| || | ||||||||||| | || ||| |||||||||||    
T  33708111 aaaaaacgttggggaccaaaaatttaataaaatttaagtatggactaatgttggaaacgtgcctatttataggaacctaaaacataattaaccc 33708018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 37985983 - 37985907
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| |||||||||||||||||||| | |||||| || | ||||||||||||  ||||| ||| ||||||||||||    
T  37985983 aaaaatttaataaaatttaaatagggactaatgttgcaaacacgtctatttata-agatctaaaacataattaaccct 37985907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 46595951 - 46595871
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttataggga 354  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||||| | | |||| || |||| |||||||||||||    
T  46595951 aacggaaaaaaacgttggggacaaaaaatttaataaaatttaagtagggactaacgttgaaaacgcgcctatttataggga 46595871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 373
Target Start/End: Original strand, 33709443 - 33709542
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||  |||||| ||||||||||||| |||||| | || || ||| | || ||||||||||||| || ||| |||||||||||    
T  33709443 aacggaaaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatattagaaacacgcctatttatagggacctaaaacataattaaccc 33709542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 36368414 - 36368489
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    |||||| ||||||||||||| |||||| | | ||||||| |||| ||||||||| ||| || ||| ||||||||||    
T  36368414 aaaaatttaataaaatttaagtagggactaaggttggaaacgcgcctatttataaggacctaaaacataattaacc 36368489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 274 - 372
Target Start/End: Original strand, 15054690 - 15054788
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    ||||| ||||||||||| |||| |||||| ||||||||||| | |||| | | ||||||||| | |  |||||||||||||  | ||| ||||||||||    
T  15054690 aacggaaaaaaacattggggaccaaaaatttaataaaattttagtaggtactaatgttggaaacacacctatttatagggacttaaaacataattaacc 15054788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 36249380 - 36249458
Alignment:
Q  298 aaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    ||||| ||||||||||||| |||||| | |||||| || |||| ||||||||||| |  | ||| ||||||||||||||    
T  36249380 aaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttataggaacttaaaacataattaaccctaa 36249458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 270 - 373
Target Start/End: Complemental strand, 7852349 - 7852247
Alignment:
Q  270 tgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataatta 369  Q
    |||||||||||||||| |||| |||| |||||| ||||||||||||| |||||||| |||||| || | || ||||||||||||| || ||| |||||||    
T  7852349 tgcaaacggcaaaaaatattg-ggaccaaaaatttaataaaatttaagtagggattaatgttgaaaacacgcctatttatagggacctaaaacataatta 7852251  T
Q  370 accc 373  Q
    ||||    
T  7852250 accc 7852247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 7855373 - 7855486
Alignment:
Q  261 gaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaa 360  Q
    |||||| | ||||||||||||||||| ||| |||| |||||| ||||||||||||| |||||| | |||||| || | || |||||||||||||  | ||    
T  7855373 gaccaattttgcaaacggcaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacacgcctatttatagggacttaaa 7855472  T
Q  361 atataattaaccct 374  Q
    | ||||||||||||    
T  7855473 acataattaaccct 7855486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 22971668 - 22971591
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||||||||||||| |||||| | ||||||||| |||| |||||||||||||||| ||| ||||||||||||    
T  22971668 aaaaatttaataaaatttaagtagggactgatgttggaaacgcgcctatttatagggatctaaaacataattaaccct 22971591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 297 - 374
Target Start/End: Original strand, 23816730 - 23816807
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||||||||||||| |||||| | ||||||||| |||| |||||||||||||||| ||| ||||||||||||    
T  23816730 aaaaatttaataaaatttaagtagggactgatgttggaaacgcgcctatttatagggatctaaaacataattaaccct 23816807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 281 - 376
Target Start/End: Original strand, 15119345 - 15119440
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    |||||| ||| |||| |||||| ||||||||||||| |||||| | ||||||||| | |  ||||||||||||| |||||| ||||||||||||||    
T  15119345 aaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacacctatttatagggaccttaaacataattaaccctaa 15119440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5765537 - 5765596
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5765537 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5765596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5769072 - 5769131
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5769072 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5769131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5772607 - 5772666
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5772607 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5772666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5776142 - 5776201
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5776142 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5776201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5779677 - 5779736
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5779677 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5779736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5783212 - 5783271
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5783212 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5783271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5786747 - 5786806
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5786747 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5786806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5790282 - 5790341
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5790282 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5790341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5793817 - 5793876
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5793817 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5793876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5797352 - 5797411
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5797352 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5797411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5800887 - 5800946
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5800887 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5800946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5804422 - 5804481
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5804422 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5804481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5807957 - 5808016
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5807957 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5808016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5811492 - 5811551
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5811492 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5811551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5815027 - 5815086
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5815027 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5815086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 5818562 - 5818621
Alignment:
Q  281 aaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcg 340  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  5818562 aaaaacgttgaagactaaaaatataatataatttaaatagggattaatgttggaaacgcg 5818621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 255 - 373
Target Start/End: Original strand, 3914956 - 3915074
Alignment:
Q  255 ggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttataggga 354  Q
    |||||||||||||  |  |||||| ||||| | ||| |||  |||||| |||||||||| ||||||||| | ||| |||||||  || ||||| ||||||    
T  3914956 ggcaatgaccaaacttataaacggaaaaaatcgttggggatgaaaaatttaataaaattaaaatagggactaatgatggaagcttgtttatttgtaggga 3915055  T
Q  355 tcttaaatataattaaccc 373  Q
     |||||| |||||||||||    
T  3915056 ccttaaacataattaaccc 3915074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 2546511 - 2546581
Alignment:
Q  261 gaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgtt 331  Q
    ||||||| || ||||||  ||||||| |||||||  ||||||| |||||||||||||||| |||| |||||    
T  2546511 gaccaaacctacaaacgtgaaaaaacgttgaggatgaaaaatagaataaaatttaaatagagattaatgtt 2546581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 373
Target Start/End: Original strand, 5086947 - 5087039
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||| ||| |||  |||||| |||||||||||||| ||| |   ||||||||||| ||  |||||||||||| |||||| |||||||||||    
T  5086947 aaaaaacgttggggatgaaaaatttaataaaatttaaaaagg-acgaatgttggaagctcgcttatttatagggaccttaaacataattaaccc 5087039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 5078776 - 5078724
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtcta 344  Q
    ||||||||||| ||||||||||||  |||||| | ||||||||| ||||||||    
T  5078776 ggactaaaaatttaataaaatttatgtagggactaatgttggaatcgcgtcta 5078724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 5612 - 5517
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacccta 375  Q
    ||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||| ||| |||| ||||||||||||| || ||| |||||||||||||    
T  5612 aaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttagaaacgcgcctatttatagggacctaaaacataattaacccta 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 368
Target Start/End: Original strand, 7384 - 7455
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataatt 368  Q
    |||||| ||||||||||||| |||||| | ||||||||| |||  ||||||||| |||||| ||| ||||||    
T  7384 aaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttataaggatctaaaacataatt 7455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 21439088 - 21438994
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    ||||||| ||| |||| |||||| ||||||||||||| ||  || | ||||||||| |||| |||||||||||||||| ||| ||||||||||||    
T  21439088 aaaaaacgttggggaccaaaaatttaataaaatttaagtatagactaatgttggaaacgcgcctatttatagggatctaaaacataattaaccct 21438994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 44492673 - 44492579
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    ||||||||||| |||  | |||| ||||||||||||| || ||||| ||||||||| |||| ||||||||||||| || ||| ||||||||||||    
T  44492673 aaaaaacattggggatcacaaatttaataaaatttaagtatggattaatgttggaaacgcgcctatttatagggacctaaaacataattaaccct 44492579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 9111339 - 9111246
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||||| |||||||  |||||| |||||||||||||||||||||  ||||||||||| ||| |||||||| | |  ||||| |||||||||||    
T  9111339 aaaaaacgttgaggatgaaaaatttaataaaatttaaatagggatcaatgttggaagctcgtttatttataagaactttaaacataattaaccc 9111246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 373
Target Start/End: Original strand, 44493997 - 44494096
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| |||||||| |||||| ||||||||||||| |||||| | ||||||||| | || | ||||||| ||| || ||| |||||||||||    
T  44493997 aacggaaaaaaacgttgaggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgccaatttataaggacctaaaacataattaaccc 44494096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 274 - 351
Target Start/End: Original strand, 18673308 - 18673386
Alignment:
Q  274 aacggcaaaaaacattgagg-actaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatag 351  Q
    ||||| ||||||||||| || || |||||| |||||||||||||||||||||| ||||||||| | || ||||||||||    
T  18673308 aacggaaaaaaacattgggggaccaaaaatttaataaaatttaaatagggattaatgttggaaacacgcctatttatag 18673386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 274 - 372
Target Start/End: Original strand, 33001359 - 33001457
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaacc 372  Q
    ||||| ||||||| ||| |||  |||||| |||||||||||||  ||||| | ||||||||| | |||||||||||||||| || ||| ||||||||||    
T  33001359 aacggaaaaaaacgttggggatcaaaaatttaataaaatttaagcagggactaatgttggaaacacgtctatttatagggacctaaaacataattaacc 33001457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 280 - 351
Target Start/End: Original strand, 1373704 - 1373775
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatag 351  Q
    |||||||||||  ||| |||||| ||||||||||||| |||||| | ||||||||| | |||||||||||||    
T  1373704 aaaaaacattggtgacaaaaaatttaataaaatttaagtagggactaatgttggaaacacgtctatttatag 1373775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 23787418 - 23787319
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| | | |||| |||||| ||||||||||||| | |||| | ||||||||| | || ||||||||||||| || ||| |||||||||||    
T  23787418 aacggaaaaaaacgtaggggaccaaaaatttaataaaatttaagtggggactaatgttggaaacacgcctatttatagggacctaaaacataattaaccc 23787319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 20719540 - 20719614
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttataggga 354  Q
    ||||||| ||| |||  |||||| ||||||||||||| |||||| | ||||||||| |||| |||||||||||||    
T  20719540 aaaaaacgttggggatcaaaaatgtaataaaatttaagtagggactaatgttggaaacgcgcctatttataggga 20719614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 33000769 - 33000691
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagg 352  Q
    ||||| ||||||||||| |||| |||||| ||||||||||||| |||| | | | ||||||| |||| |||||||||||    
T  33000769 aacggaaaaaaacattggggaccaaaaatttaataaaatttaagtaggaactaacgttggaaacgcgcctatttatagg 33000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 374
Target Start/End: Original strand, 9112173 - 9112294
Alignment:
Q  253 acggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagg 352  Q
    ||||||| |||||||  | ||||| | ||||||| ||| |||  |||||| |||||||||||||||||| |   |||||| |||| ||  |||||||||     
T  9112173 acggcaaggaccaaacttacaaaccgaaaaaaacgttggggatgaaaaatttaataaaatttaaataggaaccaatgttgaaagctcgcttatttataga 9112272  T
Q  353 gatcttaaatataattaaccct 374  Q
    || |||||| ||||||||||||    
T  9112273 gaccttaaacataattaaccct 9112294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 20721045 - 20721142
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    ||||| ||||||| ||| |||| |||||| ||||||||||||| |||||| | ||||| |||  | | ||||||||||||| || ||| |||||||||    
T  20721045 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttagaaatgtgcctatttatagggacctaaaacataattaac 20721142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 373
Target Start/End: Original strand, 20721736 - 20721817
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||| |||||| ||||||||||||| || ||| | |||||| || |||| ||||||||||||| || ||| |||||||||||    
T  20721736 ggaccaaaaatttaataaaatttaagtatggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaaccc 20721817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 376
Target Start/End: Original strand, 30982908 - 30983011
Alignment:
Q  272 caaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaac 371  Q
    ||||||| |||||||||||||||  |||||| ||||||||||| | ||||||   ||||||||||| ||  ||||| ||  || |||||| |||||||||    
T  30982908 caaacggaaaaaaacattgaggatgaaaaatttaataaaattttagtagggaccaatgttggaagctcgcttatttgta-tgaccttaaacataattaac 30983006  T
Q  372 cctaa 376  Q
    |||||    
T  30983007 cctaa 30983011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 32317965 - 32317886
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    |||||| |||||||||||||||||| |   ||||||||||| ||  ||||||||||||  |||||  |||||||||||||    
T  32317965 aaaaatttaataaaatttaaataggaaccaatgttggaagctcgcttatttatagggactttaaacctaattaaccctaa 32317886  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 42486844 - 42486773
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatag 351  Q
    ||||||| ||| |||| |||||| ||||||||||||| || ||| | ||||||||| |||| ||||||||||    
T  42486844 aaaaaactttggggaccaaaaatttaataaaatttaagtatggactaatgttggaaacgcgcctatttatag 42486773  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 374
Target Start/End: Original strand, 3105939 - 3106005
Alignment:
Q  308 aaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    ||||||||| |||||| | ||||||||| |||  ||||||||||||| || ||| ||||||||||||    
T  3105939 aaaatttaagtagggactaatgttggaaacgcacctatttatagggacctaaaacataattaaccct 3106005  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 375
Target Start/End: Complemental strand, 3117767 - 3117645
Alignment:
Q  253 acggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagg 352  Q
    ||||||| |||||||  | ||||||| | ||||| ||| |||  |||||| |||||||||||||||||||||  |||||| ||||  |  |||||   ||    
T  3117767 acggcaaggaccaaacttacaaacggaacaaaacgttggggatgaaaaatttaataaaatttaaatagggatcaatgttgaaagcttgcttatttgccgg 3117668  T
Q  353 gatcttaaatataattaacccta 375  Q
    || |||||| |||||||||||||    
T  3117667 gaccttaaacataattaacccta 3117645  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 1373356 - 1373260
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    ||||||| |||  ||| |||||| ||||||||||||  |||||| | ||||||||| |  | ||||||||||||| || ||| ||||| ||||||||    
T  1373356 aaaaaacgttggtgaccaaaaatttaataaaatttatgtagggactaatgttggaaacatgcctatttatagggacctaaaacataatcaaccctaa 1373260  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 32320038 - 32320132
Alignment:
Q  272 caaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataatt 368  Q
    ||||||| ||||||| ||| |||  |||||| |||||||||||||||||||||  |||||| | || ||| |||||| | ||| |||||||||||||    
T  32320038 caaacggaaaaaaacgttg-ggatgaaaaatttaataaaatttaaatagggatcaatgttgaatgctcgtttatttaca-ggaccttaaatataatt 32320132  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 247 - 375
Target Start/End: Complemental strand, 282737 - 282609
Alignment:
Q  247 aatttaacggcaatgaccaaatctgcaaacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatt 346  Q
    ||||| |||| || |||||||  | ||||||| ||||||| ||| |||  |||||| ||||||||||||||||||||   ||||||||| | ||  ||||    
T  282737 aatttgacggtaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttggaaactcgcttatt 282638  T
Q  347 tatagggatcttaaatataattaacccta 375  Q
    ||||||||  ||||| |||||||||||||    
T  282637 tatagggactttaaacataattaacccta 282609  T

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Target: scaffold0093 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 374
Target Start/End: Original strand, 49276 - 49353
Alignment:
Q  297 aaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccct 374  Q
    |||||| ||||||||||||| |||||| | ||||||||| | || ||||||||||||| || ||| ||||||||||||    
T  49276 aaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaaccct 49353  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 239305 - 239206
Alignment:
Q  274 aacggcaaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    ||||| ||||||| ||| |||| ||||||  |||||||||||  |||||| | ||||||||| |||  ||||||||||||| || ||| |||||||||||    
T  239305 aacggaaaaaaacgttggggaccaaaaattgaataaaatttaggtagggactaatgttggaaacgcacctatttatagggacctaaaacataattaaccc 239206  T

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Target: scaffold0097 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 23378 - 23452
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttataggga 354  Q
    ||||||| ||| |||  |||||| ||||||||||||| |||||| | ||||||||| |||| |||||||||||||    
T  23378 aaaaaacgttggggatcaaaaatgtaataaaatttaagtagggactaatgttggaaacgcgcctatttataggga 23452  T

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Target: scaffold0097; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 373
Target Start/End: Original strand, 25565 - 25646
Alignment:
Q  292 ggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccc 373  Q
    |||| |||||| ||||||||||||| || ||| | |||||| || |||| ||||||||||||| || ||| |||||||||||    
T  25565 ggaccaaaaatttaataaaatttaagtatggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaaccc 25646  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 100952 - 100856
Alignment:
Q  280 aaaaaacattgaggactaaaaatataataaaatttaaatagggattcatgttggaagcgcgtctatttatagggatcttaaatataattaaccctaa 376  Q
    ||||||| ||| |||  |||||| |||||||||||| |||||||   || |||||||| |   ||||| ||||||||||||| ||||||||||||||    
T  100952 aaaaaacgttggggatgaaaaatttaataaaatttatatagggaccaatattggaagctctcttatttgtagggatcttaaacataattaaccctaa 100856  T

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