View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8319_low_18 (Length: 306)
Name: NF8319_low_18
Description: NF8319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8319_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 4 - 269
Target Start/End: Original strand, 622064 - 622324
Alignment:
| Q |
4 |
tttagatttttaacattttaatgtctatgattttctgtgtaggatgtgctgactgctattaaaggaggtcgtattcctcctccaggaagcatgccaactt |
103 |
Q |
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| T |
622064 |
tttagatttttaacattttaatgtctaggattttctgtgtaggatgcgctgactgctattaaaggaggtcgtattcctcctccaggaagcatgccaactt |
622163 |
T |
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| Q |
104 |
ttgaagaaattaaggatactttaggtttcaacgcatattatgaagaagagaagcgttatgctacaagtacccatcagctgctttcaaagagaggttggag |
203 |
Q |
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| T |
622164 |
ttgaagaaattaaggatactttaggtttcaacgcatattatgaagaagagaagcgttatgctacaagtaccgatcagctgctttcaaagagaggttggag |
622263 |
T |
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| Q |
204 |
agac---aaatcttaacagaaaaataagtaaataagtaaacagagtcaagtcaaatacactctgcatct |
269 |
Q |
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|||| ||||||||| |||||||||||||||| |||||||||| ||||||||||||||||| |
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| T |
622264 |
agacaaaaaatcttaaaagaaaaataagtaaat--------agagtcaagttaaatacactctgcatct |
622324 |
T |
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