View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8321_low_3 (Length: 372)

Name: NF8321_low_3
Description: NF8321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8321_low_3
NF8321_low_3
[»] scaffold0171 (1 HSPs)
scaffold0171 (33-352)||(1830-2149)
[»] chr4 (20 HSPs)
chr4 (33-352)||(45849608-45849927)
chr4 (273-352)||(26201149-26201228)
chr4 (37-74)||(32555996-32556033)
chr4 (37-74)||(33492863-33492900)
chr4 (37-74)||(35014126-35014163)
chr4 (37-74)||(40226668-40226705)
chr4 (37-74)||(41882905-41882942)
chr4 (37-74)||(56113931-56113968)
chr4 (37-74)||(56520284-56520321)
chr4 (37-74)||(19823377-19823414)
chr4 (37-74)||(41140955-41140992)
chr4 (37-74)||(41855709-41855746)
chr4 (37-70)||(44871279-44871312)
chr4 (37-74)||(48500095-48500132)
chr4 (37-69)||(6366637-6366669)
chr4 (37-68)||(8906844-8906875)
chr4 (37-68)||(49481033-49481064)
chr4 (212-254)||(26201104-26201146)
chr4 (36-70)||(52278568-52278602)
chr4 (37-74)||(54554312-54554349)
[»] chr8 (18 HSPs)
chr8 (36-352)||(34346509-34346827)
chr8 (99-147)||(14798909-14798957)
chr8 (37-72)||(22487090-22487125)
chr8 (37-72)||(43067396-43067431)
chr8 (37-74)||(356763-356800)
chr8 (37-74)||(957771-957808)
chr8 (37-70)||(15345781-15345814)
chr8 (37-70)||(15434846-15434879)
chr8 (37-70)||(15526150-15526183)
chr8 (37-74)||(30873945-30873982)
chr8 (37-74)||(32018647-32018684)
chr8 (37-86)||(32925128-32925177)
chr8 (37-74)||(40027317-40027354)
chr8 (99-147)||(14806765-14806813)
chr8 (40-74)||(5913597-5913631)
chr8 (37-74)||(29939856-29939893)
chr8 (37-74)||(38895012-38895049)
chr8 (36-68)||(42935546-42935578)
[»] chr3 (28 HSPs)
chr3 (33-352)||(1556870-1557165)
chr3 (37-86)||(44844983-44845032)
chr3 (37-74)||(32774221-32774258)
chr3 (37-74)||(41879207-41879244)
chr3 (37-74)||(42480751-42480788)
chr3 (37-74)||(48913073-48913110)
chr3 (36-70)||(35603603-35603637)
chr3 (40-74)||(54313125-54313159)
chr3 (37-74)||(1460047-1460084)
chr3 (37-74)||(24570579-24570616)
chr3 (37-74)||(29522566-29522603)
chr3 (37-74)||(36638415-36638452)
chr3 (37-74)||(41209136-41209173)
chr3 (37-74)||(49318621-49318658)
chr3 (37-74)||(51744452-51744489)
chr3 (37-86)||(51885068-51885117)
chr3 (37-68)||(10268138-10268169)
chr3 (39-70)||(28970835-28970866)
chr3 (37-68)||(43088289-43088320)
chr3 (37-74)||(3974496-3974533)
chr3 (37-74)||(3995344-3995381)
chr3 (37-74)||(12768936-12768972)
chr3 (37-74)||(26823337-26823374)
chr3 (37-70)||(30513400-30513433)
chr3 (37-66)||(44310570-44310599)
chr3 (37-74)||(49507668-49507705)
chr3 (37-74)||(53469098-53469135)
chr3 (40-68)||(41933599-41933627)
[»] chr7 (20 HSPs)
chr7 (36-74)||(8781794-8781832)
chr7 (37-74)||(3318772-3318809)
chr7 (37-74)||(13598390-13598427)
chr7 (37-74)||(17195847-17195884)
chr7 (37-74)||(18833998-18834035)
chr7 (37-74)||(22791546-22791583)
chr7 (37-74)||(38408955-38408992)
chr7 (37-74)||(40074065-40074102)
chr7 (37-72)||(32527741-32527776)
chr7 (37-72)||(36643659-36643694)
chr7 (36-74)||(23108891-23108929)
chr7 (37-86)||(30440038-30440087)
chr7 (37-70)||(33626693-33626726)
chr7 (37-74)||(40921420-40921457)
chr7 (37-74)||(42977044-42977081)
chr7 (38-74)||(35528113-35528149)
chr7 (36-68)||(46816837-46816869)
chr7 (37-68)||(30072343-30072374)
chr7 (37-68)||(31325688-31325719)
chr7 (36-68)||(24764509-24764541)
[»] chr2 (22 HSPs)
chr2 (36-74)||(27552310-27552348)
chr2 (37-74)||(19944551-19944588)
chr2 (37-74)||(34314054-34314091)
chr2 (37-74)||(37208676-37208713)
chr2 (37-72)||(10822012-10822047)
chr2 (37-72)||(31617828-31617863)
chr2 (37-87)||(23334363-23334413)
chr2 (37-74)||(9439030-9439067)
chr2 (37-70)||(10710062-10710095)
chr2 (37-70)||(10710112-10710145)
chr2 (37-74)||(25868689-25868726)
chr2 (37-74)||(26984235-26984272)
chr2 (37-70)||(30555928-30555961)
chr2 (37-74)||(42800674-42800711)
chr2 (37-68)||(18257777-18257808)
chr2 (37-68)||(38962006-38962037)
chr2 (37-70)||(2557972-2558005)
chr2 (37-70)||(12017267-12017300)
chr2 (37-74)||(12847620-12847657)
chr2 (37-66)||(13311858-13311887)
chr2 (37-66)||(41644609-41644638)
chr2 (36-68)||(15439466-15439498)
[»] chr6 (10 HSPs)
chr6 (37-86)||(13836237-13836286)
chr6 (37-74)||(21036376-21036413)
chr6 (37-74)||(29034230-29034267)
chr6 (37-74)||(32896855-32896892)
chr6 (37-74)||(12577056-12577093)
chr6 (37-68)||(34178724-34178755)
chr6 (37-67)||(15183508-15183538)
chr6 (37-74)||(12800854-12800891)
chr6 (37-74)||(26483957-26483994)
chr6 (37-74)||(26554979-26555016)
[»] chr5 (24 HSPs)
chr5 (37-74)||(17016798-17016835)
chr5 (37-74)||(18922476-18922513)
chr5 (37-74)||(21151486-21151523)
chr5 (37-74)||(39754715-39754752)
chr5 (38-74)||(14505659-14505695)
chr5 (37-74)||(4725502-4725539)
chr5 (37-74)||(19646711-19646748)
chr5 (37-74)||(24566563-24566600)
chr5 (37-74)||(24607599-24607636)
chr5 (37-74)||(39088004-39088041)
chr5 (37-86)||(41203052-41203101)
chr5 (37-69)||(8320240-8320272)
chr5 (36-68)||(16749298-16749330)
chr5 (37-68)||(5360933-5360964)
chr5 (37-68)||(7949488-7949519)
chr5 (37-72)||(8322026-8322061)
chr5 (37-67)||(7344452-7344482)
chr5 (37-67)||(17320712-17320742)
chr5 (37-74)||(5494970-5495007)
chr5 (37-70)||(21158625-21158658)
chr5 (37-74)||(24316855-24316892)
chr5 (36-68)||(20123021-20123053)
chr5 (36-68)||(36682520-36682552)
chr5 (40-68)||(38062722-38062750)
[»] chr1 (21 HSPs)
chr1 (37-74)||(35985232-35985269)
chr1 (37-74)||(40412284-40412321)
chr1 (37-74)||(44922509-44922546)
chr1 (36-72)||(45793829-45793865)
chr1 (37-72)||(20723809-20723844)
chr1 (37-74)||(700223-700260)
chr1 (37-86)||(27415336-27415385)
chr1 (37-70)||(33814696-33814729)
chr1 (37-70)||(33874166-33874199)
chr1 (37-74)||(50863641-50863678)
chr1 (36-76)||(26467712-26467752)
chr1 (37-68)||(21088327-21088358)
chr1 (37-68)||(23973953-23973984)
chr1 (37-68)||(42102486-42102517)
chr1 (44-74)||(45827003-45827033)
chr1 (37-74)||(25423034-25423070)
chr1 (37-74)||(41310294-41310331)
chr1 (37-74)||(48941118-48941155)
chr1 (37-70)||(50511750-50511783)
chr1 (37-65)||(6714903-6714931)
chr1 (36-68)||(44372654-44372686)
[»] scaffold0021 (1 HSPs)
scaffold0021 (36-70)||(120742-120776)
[»] scaffold0041 (1 HSPs)
scaffold0041 (37-74)||(51638-51675)
[»] scaffold0007 (2 HSPs)
scaffold0007 (37-70)||(231457-231490)
scaffold0007 (36-68)||(56548-56580)
[»] scaffold0003 (1 HSPs)
scaffold0003 (37-71)||(156309-156343)
[»] scaffold0661 (1 HSPs)
scaffold0661 (37-70)||(1327-1360)
[»] scaffold0461 (1 HSPs)
scaffold0461 (37-66)||(9630-9659)
[»] scaffold0036 (1 HSPs)
scaffold0036 (37-74)||(27942-27979)
[»] scaffold0019 (1 HSPs)
scaffold0019 (37-70)||(74598-74631)
[»] scaffold0583 (1 HSPs)
scaffold0583 (36-68)||(2526-2558)
[»] scaffold0124 (1 HSPs)
scaffold0124 (37-69)||(39815-39847)


Alignment Details
Target: scaffold0171 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 33 - 352
Target Start/End: Complemental strand, 2149 - 1830
Alignment:
Q  33 atattataaccataacgtatctaatttatttaaaattgtttttcacaccgtttttatgcatcattgtggattgaaattatgttggaagaactgaatgcat 132  Q
    |||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  2149 atattataaccataacgtatctaatttatttaaaattgtttttctcgccttttttatgcatcattgtggattgaaatgatgttggaataactgaatgcat 2050  T
Q  133 ttgaagttgatagaactgcttgtcgataacaagtagaaaattgatttgggaaatcaccaatcatgaagagataacctgcaatactcttcttaacatctta 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  2049 ttgaagttgatagaactgcttgtcgataacaagtcgaaaattgatttggcaaatcaccaatcatgaagagataacctgcaatactcttcttaacatcttg 1950  T
Q  233 atcacctcctcaatcaaaatctaaattaggcattcctatgattaggcattagcacgccataatcaattatgcctatgatgtatcttataattgtattagc 332  Q
    |||||||||||||| | ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| |||| |||||||    
T  1949 atcacctcctcaattagaatctgaattaggcattcctttgattaggcattagcacaccataatcaattatgcctctgatgtatcttagaattttattagc 1850  T
Q  333 agcttttaggtgacaagttt 352  Q
    ||||||||||||||||||||    
T  1849 agcttttaggtgacaagttt 1830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 33 - 352
Target Start/End: Original strand, 45849608 - 45849927
Alignment:
Q  33 atattataaccataacgtatctaatttatttaaaattgtttttcacaccgtttttatgcatcattgtggattgaaattatgttggaagaactgaatgcat 132  Q
    |||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45849608 atattataaccataacgtatctaatttatttaaaattgttttcctcgccgtttttatgcatcattgtggattgaaatgatgttggaagaactgaatgcat 45849707  T
Q  133 ttgaagttgatagaactgcttgtcgataacaagtagaaaattgatttgggaaatcaccaatcatgaagagataacctgcaatactcttcttaacatctta 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |     
T  45849708 ttgaagttgatagaactgcttgtcgataacaagtcgaaaattgatttggcaaatcaccaatcatgaagagataacctgcaatactcttcttaacatcatg 45849807  T
Q  233 atcacctcctcaatcaaaatctaaattaggcattcctatgattaggcattagcacgccataatcaattatgcctatgatgtatcttataattgtattagc 332  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||||||||    
T  45849808 atcacctcctcaatcagaatctgaattaggcattcctttgattaggcattagcacaccaaaatcaattatgcctctgatgtatcttagaattgtattagc 45849907  T
Q  333 agcttttaggtgacaagttt 352  Q
    | ||||||||||||||||||    
T  45849908 atcttttaggtgacaagttt 45849927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 26201149 - 26201228
Alignment:
Q  273 attaggcattagcacgccataatcaattatgcctatgatgtatcttataattgtattagcagcttttaggtgacaagttt 352  Q
    ||||||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||||| ||||||||| |||||||    
T  26201149 attaggcattagcacaccataatcaattatgcctctgatgcatcttagaattgtattagcaggttttaggtgtcaagttt 26201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 32555996 - 32556033
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32555996 tataaccataacgtatctaatttatttaaaattgtttt 32556033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 33492900 - 33492863
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33492900 tataaccataacgtatctaatttatttaaaattgtttt 33492863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 35014126 - 35014163
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35014126 tataaccataacgtatctaatttatttaaaattgtttt 35014163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 40226705 - 40226668
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40226705 tataaccataacgtatctaatttatttaaaattgtttt 40226668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 41882942 - 41882905
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41882942 tataaccataacgtatctaatttatttaaaattgtttt 41882905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 56113968 - 56113931
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  56113968 tataaccataacgtatctaatttatttaaaattgtttt 56113931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 56520284 - 56520321
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  56520284 tataaccataacgtatctaatttatttaaaattgtttt 56520321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 19823414 - 19823377
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19823414 tataaccataacgtatctaatttatttaaaattatttt 19823377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 41140955 - 41140992
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  41140955 tataaacataacgtatctaatttatttaaaattgtttt 41140992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 41855709 - 41855746
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  41855709 tataaccataacgtatctaatttattttaaattgtttt 41855746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 44871312 - 44871279
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  44871312 tataaccataacgtatctaatttatttaaaattg 44871279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 48500132 - 48500095
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| |||||||||||||||||||||||||    
T  48500132 tataaccataacatatctaatttatttaaaattgtttt 48500095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 6366637 - 6366669
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaatt 69  Q
    |||||||||||||||||||||||||||||||||    
T  6366637 tataaccataacgtatctaatttatttaaaatt 6366669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Complemental strand, 8906875 - 8906844
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  8906875 tataaccataacgtatctaatttatttaaaat 8906844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 49481033 - 49481064
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  49481033 tataaccataacgtatctaatttatttaaaat 49481064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 26201104 - 26201146
Alignment:
Q  212 aatactcttcttaacatcttaatcacctcctcaatcaaaatct 254  Q
    |||||||||||||||||| | |||||||||||||||| |||||    
T  26201104 aatactcttcttaacatcctgatcacctcctcaatcagaatct 26201146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 52278602 - 52278568
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||| |||||    
T  52278602 ttataaccataacgtatctaatttatttacaattg 52278568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 54554349 - 54554312
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  54554349 tataatcataacgtatctaatttatttaaaattatttt 54554312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 36 - 352
Target Start/End: Complemental strand, 34346827 - 34346509
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaattgtttttcacaccgtttttatgcatcattgtggattgaaattatgttggaagaactgaatgcatttg 135  Q
    |||||| |||||||||||||||||||||||||||||||| |   ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  34346827 ttataatcataacgtatctaatttatttaaaattgttttcctg-ccgtttttatgcatcattgt--attgaaatgatgttggaagaactgaatgcatttg 34346731  T
Q  136 aagttgatagaac-----tgcttgtcgataacaagtagaaaattgatttgggaaatcaccaatcatgaagagataacctgcaatactcttcttaacatct 230  Q
    |||||||||||||     |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||     
T  34346730 aagttgatagaaccaaactgcttgtcgataacaagttgaaaattgatttggcaaatcaccaatcatgaagagataacatgcaatactcttcttaacatcc 34346631  T
Q  231 taatcacctcctcaatcaaaatctaaattaggcattcctatgattaggcattagcacgccataatcaattatgcctatgatgtatcttataattgtatta 330  Q
    | |||||||||||||||| ||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||| | |||||||||| ||||||||||    
T  34346630 tgatcacctcctcaatcagaatctgaattaggcatttctttgattaggcattagcacaccataatcaattatgcctctaatgtatcttagaattgtatta 34346531  T
Q  331 gcagcttttaggtgacaagttt 352  Q
    ||| ||||||||||||||||||    
T  34346530 gcaccttttaggtgacaagttt 34346509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 14798957 - 14798909
Alignment:
Q  99 tggattgaaattatgttggaagaactgaatgcatttgaagttgatagaa 147  Q
    |||||||||||  | ||||||||||||||||||||||||||||||||||    
T  14798957 tggattgaaatgttattggaagaactgaatgcatttgaagttgatagaa 14798909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 22487125 - 22487090
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtt 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  22487125 tataaccataacgtatctaatttatttaaaattgtt 22487090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 43067396 - 43067431
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtt 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  43067396 tataaccataacgtatctaatttatttaaaattgtt 43067431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 356763 - 356800
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  356763 tataaccataacgtatctaatttattttaaattgtttt 356800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 957771 - 957808
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  957771 tataaccataacgtatctaatttatttaaaattatttt 957808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 15345814 - 15345781
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  15345814 tataaccataacgtatctaatttatttaaaattg 15345781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 15434879 - 15434846
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  15434879 tataaccataacgtatctaatttatttaaaattg 15434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 15526183 - 15526150
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  15526183 tataaccataacgtatctaatttatttaaaattg 15526150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 30873982 - 30873945
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30873982 tataaccataatgtatctaatttatttaaaattgtttt 30873945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 32018647 - 32018684
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||| |||||||||||||||||||||||||||||||    
T  32018647 tataactataacgtatctaatttatttaaaattgtttt 32018684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 32925177 - 32925128
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttttcacaccgtttt 86  Q
    |||||||||||| |||||||||||||| |||||||||||| | |||||||    
T  32925177 tataaccataacatatctaatttattttaaattgtttttctcgccgtttt 32925128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 40027354 - 40027317
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||| |||||||||||||||    
T  40027354 tataaccataacgtatctaattcatttaaaattgtttt 40027317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 14806813 - 14806765
Alignment:
Q  99 tggattgaaattatgttggaagaactgaatgcatttgaagttgatagaa 147  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||    
T  14806813 tggattgaaatgttatcggaagaactgaatgcatttgaagttgatagaa 14806765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 5913597 - 5913631
Alignment:
Q  40 aaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||| |||||||||||||||||||||||||    
T  5913597 aaccataacatatctaatttatttaaaattgtttt 5913631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 29939893 - 29939856
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  29939893 tataaccataacgtatcgaatttattcaaaattgtttt 29939856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 38895012 - 38895049
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  38895012 tataaccataacatatctaatttattttaaattgtttt 38895049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 42935578 - 42935546
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||| |||||||||||||||||||    
T  42935578 ttataaccataacatatctaatttatttaaaat 42935546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 182; Significance: 3e-98; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 33 - 352
Target Start/End: Complemental strand, 1557165 - 1556870
Alignment:
Q  33 atattataaccataacgtatctaatttatttaaaattgtttttcacaccgtttttatgcatcattgtggattgaaattatgttggaagaactgaatgcat 132  Q
    |||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1557165 atattataaccataacgtatctaatttatttaaaattgtttttctcgccatttttatgcatcattgtggattgaaatgatgttggaagaactgaatgcat 1557066  T
Q  133 ttgaagttgatagaactgcttgtcgataacaagtagaaaattgatttgggaaatcaccaatcatgaagagataacctgcaatactcttcttaacatctta 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||        ||||||||||||||       
T  1557065 ttgaagttgatagaactgcttgtcgataacaagtcgaaaattgatttggcaaatcaccaatcatgaagagataac--------ctcttcttaacatccag 1556974  T
Q  233 atcacctcctcaatcaaaatctaaattaggcattcctatgattaggcattagcacgccataatcaattatgcctatgatgtatcttataattgtattagc 332  Q
    | |||||||||||||| |||||||                ||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||    
T  1556973 accacctcctcaatcagaatctaa----------------attaggcattagcacaccataatcaattatgcctctgatgtatcttagaattgtattagc 1556890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 44845032 - 44844983
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttttcacaccgtttt 86  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  44845032 tataaccataacgtatctaatttatttaaaattgtttttctcgccgtttt 44844983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 32774258 - 32774221
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32774258 tataaccataacgtatctaatttatttaaaattgtttt 32774221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 41879244 - 41879207
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41879244 tataaccataacgtatctaatttatttaaaattgtttt 41879207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 42480788 - 42480751
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42480788 tataaccataacgtatctaatttatttaaaattgtttt 42480751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 48913110 - 48913073
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48913110 tataaccataacgtatctaatttatttaaaattgtttt 48913073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 35603637 - 35603603
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaattg 70  Q
    |||||||||||||||||||||||||||||||||||    
T  35603637 ttataaccataacgtatctaatttatttaaaattg 35603603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 54313159 - 54313125
Alignment:
Q  40 aaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||||||||    
T  54313159 aaccataacgtatctaatttatttaaaattgtttt 54313125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 1460084 - 1460047
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  1460084 tataaccataacgtatctaatttattttaaattgtttt 1460047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 24570579 - 24570616
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  24570579 tataaccataacgtatctaatttattttaaattgtttt 24570616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 29522603 - 29522566
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29522603 tataaccataacgtatcttatttatttaaaattgtttt 29522566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 36638415 - 36638452
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  36638415 tataaccataacgtatctaatttattttaaattgtttt 36638452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 41209173 - 41209136
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  41209173 tataaacataacgtatctaatttatttaaaattgtttt 41209136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 49318621 - 49318658
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  49318621 tataaccataacgtatctaatttattttaaattgtttt 49318658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 51744452 - 51744489
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  51744452 tataatcataacgtatctaatttatttaaaattgtttt 51744489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 51885117 - 51885068
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttttcacaccgtttt 86  Q
    ||||||||||| |||||||||||||||||||||| ||| | |||||||||    
T  51885117 tataaccataatgtatctaatttatttaaaattgatttcctcaccgtttt 51885068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 10268138 - 10268169
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  10268138 tataaccataacgtatctaatttatttaaaat 10268169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 70
Target Start/End: Original strand, 28970835 - 28970866
Alignment:
Q  39 taaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||    
T  28970835 taaccataacgtatctaatttatttaaaattg 28970866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 43088289 - 43088320
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  43088289 tataaccataacgtatctaatttatttaaaat 43088320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 3974533 - 3974496
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  3974533 tataaccctaacgtatctaatttatttaaaattatttt 3974496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 3995344 - 3995381
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  3995344 tataaccctaacgtatctaatttatttaaaattatttt 3995381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 12768936 - 12768972
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  12768936 tataaccataacgtatctaattt-tttaaaattgtttt 12768972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 26823337 - 26823374
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  26823337 tataaccataacatatctaatttatttaaaattatttt 26823374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 30513400 - 30513433
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    |||||||||||||||| |||||||||||||||||    
T  30513400 tataaccataacgtatgtaatttatttaaaattg 30513433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 44310570 - 44310599
Alignment:
Q  37 tataaccataacgtatctaatttatttaaa 66  Q
    ||||||||||||||||||||||||||||||    
T  44310570 tataaccataacgtatctaatttatttaaa 44310599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 49507668 - 49507705
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||| || |||||||||||||||||||||||    
T  49507668 tataaccataatgtgtctaatttatttaaaattgtttt 49507705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 53469098 - 53469135
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  53469098 tataaccataacatatctaatttatttaaaattatttt 53469135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 41933599 - 41933627
Alignment:
Q  40 aaccataacgtatctaatttatttaaaat 68  Q
    |||||||||||||||||||||||||||||    
T  41933599 aaccataacgtatctaatttatttaaaat 41933627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 8781794 - 8781832
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8781794 ttataaccataacgtatctaatttatttaaaattgtttt 8781832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 3318809 - 3318772
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3318809 tataaccataacgtatctaatttatttaaaattgtttt 3318772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 13598390 - 13598427
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13598390 tataaccataacgtatctaatttatttaaaattgtttt 13598427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 17195847 - 17195884
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17195847 tataaccataacgtatctaatttatttaaaattgtttt 17195884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 18834035 - 18833998
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18834035 tataaccataacgtatctaatttatttaaaattgtttt 18833998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 22791583 - 22791546
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22791583 tataaccataacgtatctaatttatttaaaattgtttt 22791546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 38408955 - 38408992
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38408955 tataaccataacgtatctaatttatttaaaattgtttt 38408992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 40074102 - 40074065
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40074102 tataaccataacgtatctaatttatttaaaattgtttt 40074065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 32527776 - 32527741
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtt 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  32527776 tataaccataacgtatctaatttatttaaaattgtt 32527741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 36643659 - 36643694
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtt 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  36643659 tataaccataacgtatctaatttatttaaaattgtt 36643694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 23108891 - 23108929
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  23108891 ttataaccataacgtatctaatttatttaaaattatttt 23108929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 30440038 - 30440087
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttttcacaccgtttt 86  Q
    |||||||||||||||| ||||||||||||||||| ||||| | |||||||    
T  30440038 tataaccataacgtatgtaatttatttaaaattgattttctcgccgtttt 30440087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 33626726 - 33626693
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  33626726 tataaccataacgtatctaatttatttaaaattg 33626693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 40921457 - 40921420
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||| |||||||    
T  40921457 tataaccataacgtatctaatttatttaaatttgtttt 40921420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 42977044 - 42977081
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  42977044 tataaccataacgtatctaatttatataaaattgtttt 42977081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 35528149 - 35528113
Alignment:
Q  38 ataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||| ||||||||||||||||||||||||||    
T  35528149 ataaccataatgtatctaatttatttaaaattgtttt 35528113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 46816869 - 46816837
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    |||||||||||||||||||||||||||||||||    
T  46816869 ttataaccataacgtatctaatttatttaaaat 46816837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 30072343 - 30072374
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  30072343 tataaccataacgtatctaatttatttaaaat 30072374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 31325688 - 31325719
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  31325688 tataaccataacgtatctaatttatttaaaat 31325719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 24764509 - 24764541
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||| |||||||||||||||||||    
T  24764509 ttataaccataacatatctaatttatttaaaat 24764541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 27552310 - 27552348
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27552310 ttataaccataacgtatctaatttatttaaaattgtttt 27552348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 19944588 - 19944551
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19944588 tataaccataacgtatctaatttatttaaaattgtttt 19944551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 34314054 - 34314091
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34314054 tataaccataacgtatctaatttatttaaaattgtttt 34314091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 37208713 - 37208676
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37208713 tataaccataacgtatctaatttatttaaaattgtttt 37208676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 10822047 - 10822012
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtt 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  10822047 tataaccataacgtatctaatttatttaaaattgtt 10822012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 31617863 - 31617828
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtt 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  31617863 tataaccataacgtatctaatttatttaaaattgtt 31617828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 23334363 - 23334413
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttttcacaccgttttt 87  Q
    |||||||||||||||||| ||||||||||||||||||| | | ||||||||    
T  23334363 tataaccataacgtatcttatttatttaaaattgttttcctcgccgttttt 23334413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 9439067 - 9439030
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||| |||||||||||||||||||||    
T  9439067 tataaccataacgtatataatttatttaaaattgtttt 9439030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 10710062 - 10710095
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  10710062 tataaccataacgtatctaatttatttaaaattg 10710095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 10710112 - 10710145
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  10710112 tataaccataacgtatctaatttatttaaaattg 10710145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 25868726 - 25868689
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||| |||||||||||||||||||||||||||||||    
T  25868726 tataacgataacgtatctaatttatttaaaattgtttt 25868689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 26984272 - 26984235
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  26984272 tataaccataacgtatctaatttattttaaattgtttt 26984235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 30555928 - 30555961
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  30555928 tataaccataacgtatctaatttatttaaaattg 30555961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 42800674 - 42800711
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  42800674 tataaacataacgtatctaatttatttaaaattgtttt 42800711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Complemental strand, 18257808 - 18257777
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  18257808 tataaccataacgtatctaatttatttaaaat 18257777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Complemental strand, 38962037 - 38962006
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  38962037 tataaccataacgtatctaatttatttaaaat 38962006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 2557972 - 2558005
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    |||||||||||| |||||||||||||||||||||    
T  2557972 tataaccataacatatctaatttatttaaaattg 2558005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 12017300 - 12017267
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    |||||||||||| |||||||||||||||||||||    
T  12017300 tataaccataacatatctaatttatttaaaattg 12017267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 12847657 - 12847620
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||  |||||||||||||||||||||||||    
T  12847657 tataaccataatatatctaatttatttaaaattgtttt 12847620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 13311858 - 13311887
Alignment:
Q  37 tataaccataacgtatctaatttatttaaa 66  Q
    ||||||||||||||||||||||||||||||    
T  13311858 tataaccataacgtatctaatttatttaaa 13311887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 41644609 - 41644638
Alignment:
Q  37 tataaccataacgtatctaatttatttaaa 66  Q
    ||||||||||||||||||||||||||||||    
T  41644609 tataaccataacgtatctaatttatttaaa 41644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 15439466 - 15439498
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||| |||||||    
T  15439466 ttataaccataacgtatctaatttaattaaaat 15439498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 13836237 - 13836286
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttttcacaccgtttt 86  Q
    |||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  13836237 tataaccataacgtatataatttatttaaaattgttttactcaccgtttt 13836286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 21036376 - 21036413
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21036376 tataaccataacgtatctaatttatttaaaattgtttt 21036413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 29034267 - 29034230
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29034267 tataaccataacgtatctaatttatttaaaattgtttt 29034230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 32896892 - 32896855
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32896892 tataaccataacgtatctaatttatttaaaattgtttt 32896855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 12577093 - 12577056
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||| |||||||||||||||||||||    
T  12577093 tataaccataacgtatttaatttatttaaaattgtttt 12577056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 34178724 - 34178755
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  34178724 tataaccataacgtatctaatttatttaaaat 34178755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 15183538 - 15183508
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaa 67  Q
    |||||||||||||||||||||||||||||||    
T  15183538 tataaccataacgtatctaatttatttaaaa 15183508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 12800891 - 12800854
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  12800891 tataaccataacatatctaatttatttaaaaatgtttt 12800854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 26483957 - 26483994
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| || ||||||||||||||||||||||    
T  26483957 tataaccataacatacctaatttatttaaaattgtttt 26483994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 26555016 - 26554979
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  26555016 tataaccataacatatctaatttatttaaaattatttt 26554979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 17016798 - 17016835
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17016798 tataaccataacgtatctaatttatttaaaattgtttt 17016835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 18922476 - 18922513
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18922476 tataaccataacgtatctaatttatttaaaattgtttt 18922513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 21151523 - 21151486
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21151523 tataaccataacgtatctaatttatttaaaattgtttt 21151486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 39754715 - 39754752
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39754715 tataaccataacgtatctaatttatttaaaattgtttt 39754752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 14505695 - 14505659
Alignment:
Q  38 ataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||||||||||    
T  14505695 ataaccataacgtatctaatttatttaaaattgtttt 14505659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 4725502 - 4725539
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||| |||||||||    
T  4725502 tataaccataacgtatctaatttatttacaattgtttt 4725539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 19646748 - 19646711
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  19646748 tataaccataacgtatctaatttattttaaattgtttt 19646711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 24566563 - 24566600
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||||| |||||    
T  24566563 tataaccataacgtatctaatttatttaaaatcgtttt 24566600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 24607599 - 24607636
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||||| |||||    
T  24607599 tataaccataacgtatctaatttatttaaaatcgtttt 24607636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 39088004 - 39088041
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||| |||||||||||||||||||||||||||||||    
T  39088004 tataacaataacgtatctaatttatttaaaattgtttt 39088041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 41203101 - 41203052
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttttcacaccgtttt 86  Q
    ||||| |||||| ||||||||||||||||||||||||||| | |||||||    
T  41203101 tataaacataacatatctaatttatttaaaattgtttttctcgccgtttt 41203052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 8320272 - 8320240
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaatt 69  Q
    |||||||||||||||||||||||||||||||||    
T  8320272 tataaccataacgtatctaatttatttaaaatt 8320240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 16749298 - 16749330
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    |||||||||||||||||||||||||||||||||    
T  16749298 ttataaccataacgtatctaatttatttaaaat 16749330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Complemental strand, 5360964 - 5360933
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  5360964 tataaccataacgtatctaatttatttaaaat 5360933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Complemental strand, 7949519 - 7949488
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  7949519 tataaccataacgtatctaatttatttaaaat 7949488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 8322026 - 8322061
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtt 72  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8322026 tataaccataatgtatctaatttatttaaaattgtt 8322061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 7344482 - 7344452
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaa 67  Q
    |||||||||||||||||||||||||||||||    
T  7344482 tataaccataacgtatctaatttatttaaaa 7344452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 67
Target Start/End: Original strand, 17320712 - 17320742
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaa 67  Q
    |||||||||||||||||||||||||||||||    
T  17320712 tataaccataacgtatctaatttatttaaaa 17320742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 5494970 - 5495007
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  5494970 tataaccataacatatctaatttatttaaaattatttt 5495007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 21158658 - 21158625
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    |||||||||||||||||||| |||||||||||||    
T  21158658 tataaccataacgtatctaacttatttaaaattg 21158625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 24316855 - 24316892
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  24316855 tataaccataacgtatttaatttattttaaattgtttt 24316892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 20123021 - 20123053
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||| |||||||||||||||||||    
T  20123021 ttataaccataacatatctaatttatttaaaat 20123053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 36682552 - 36682520
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||| |||||||||||||||||||    
T  36682552 ttataaccataacatatctaatttatttaaaat 36682520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Complemental strand, 38062750 - 38062722
Alignment:
Q  40 aaccataacgtatctaatttatttaaaat 68  Q
    |||||||||||||||||||||||||||||    
T  38062750 aaccataacgtatctaatttatttaaaat 38062722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 35985269 - 35985232
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35985269 tataaccataacgtatctaatttatttaaaattgtttt 35985232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 40412321 - 40412284
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40412321 tataaccataacgtatctaatttatttaaaattgtttt 40412284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 44922509 - 44922546
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44922509 tataaccataacgtatctaatttatttaaaattgtttt 44922546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 45793865 - 45793829
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaattgtt 72  Q
    |||||||||||||||||||||||||||||||||||||    
T  45793865 ttataaccataacgtatctaatttatttaaaattgtt 45793829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 20723809 - 20723844
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtt 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  20723809 tataaccataacgtatctaatttatttaaaattgtt 20723844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 700223 - 700260
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||||| |||||    
T  700223 tataaccataacgtatctaatttatttaaaatggtttt 700260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 27415336 - 27415385
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttttcacaccgtttt 86  Q
    ||||||||||||||||||||||||||||||||  |||||| || ||||||    
T  27415336 tataaccataacgtatctaatttatttaaaatcatttttctcatcgtttt 27415385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 33814729 - 33814696
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  33814729 tataaccataacgtatctaatttatttaaaattg 33814696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 33874199 - 33874166
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  33874199 tataaccataacgtatctaatttatttaaaattg 33874166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 50863678 - 50863641
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  50863678 tataaccataacgtatctaatttctttaaaattgtttt 50863641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 26467752 - 26467712
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaattgtttttc 76  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  26467752 ttataaccataacatacctaatttatttaaaattgtttttc 26467712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Complemental strand, 21088358 - 21088327
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  21088358 tataaccataacgtatctaatttatttaaaat 21088327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Complemental strand, 23973984 - 23973953
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  23973984 tataaccataacgtatctaatttatttaaaat 23973953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 68
Target Start/End: Original strand, 42102486 - 42102517
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||||||||||||||||||||||    
T  42102486 tataaccataacgtatctaatttatttaaaat 42102517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 74
Target Start/End: Original strand, 45827003 - 45827033
Alignment:
Q  44 ataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||||    
T  45827003 ataacgtatctaatttatttaaaattgtttt 45827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 25423070 - 25423034
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25423070 tataaccataacgtatctaa-ttatttaaaattgtttt 25423034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 41310331 - 41310294
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  41310331 tataaccataacatatctaatttatttaaaattatttt 41310294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 48941118 - 48941155
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  48941118 tataactataacgtatcttatttatttaaaattgtttt 48941155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 50511783 - 50511750
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    |||||||||||| |||||||||||||||||||||    
T  50511783 tataaccataacatatctaatttatttaaaattg 50511750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 6714931 - 6714903
Alignment:
Q  37 tataaccataacgtatctaatttatttaa 65  Q
    |||||||||||||||||||||||||||||    
T  6714931 tataaccataacgtatctaatttatttaa 6714903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 44372686 - 44372654
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||| |||||||||||||||||||    
T  44372686 ttataaccataacatatctaatttatttaaaat 44372654  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 120776 - 120742
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaattg 70  Q
    |||||||||||||||||||||||||||||||||||    
T  120776 ttataaccataacgtatctaatttatttaaaattg 120742  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 51638 - 51675
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||||||||||||||||||||| |||||||    
T  51638 tataaccataacgtatctaatttatttaaatttgtttt 51675  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 231490 - 231457
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    ||||||||||||||||||||||||||||||||||    
T  231490 tataaccataacgtatctaatttatttaaaattg 231457  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 56548 - 56580
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    ||||||||||||| |||||||||||||||||||    
T  56548 ttataaccataacatatctaatttatttaaaat 56580  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 156309 - 156343
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgt 71  Q
    |||||||||||| ||||||||||||||||||||||    
T  156309 tataaccataacatatctaatttatttaaaattgt 156343  T

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Target: scaffold0661 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 1360 - 1327
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    |||||| |||||||||||||||||||||||||||    
T  1360 tataactataacgtatctaatttatttaaaattg 1327  T

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Target: scaffold0461 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 9630 - 9659
Alignment:
Q  37 tataaccataacgtatctaatttatttaaa 66  Q
    ||||||||||||||||||||||||||||||    
T  9630 tataaccataacgtatctaatttatttaaa 9659  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 27942 - 27979
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattgtttt 74  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  27942 tataaccataacatatctaatttatttaaaattatttt 27979  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 74631 - 74598
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaattg 70  Q
    |||||||||||| |||||||||||||||||||||    
T  74631 tataaccataacttatctaatttatttaaaattg 74598  T

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Target: scaffold0583 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 2526 - 2558
Alignment:
Q  36 ttataaccataacgtatctaatttatttaaaat 68  Q
    |||||| ||||||||||||||||||||||||||    
T  2526 ttataatcataacgtatctaatttatttaaaat 2558  T

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Target: scaffold0124 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 39847 - 39815
Alignment:
Q  37 tataaccataacgtatctaatttatttaaaatt 69  Q
    |||||||||||| ||||||||||||||||||||    
T  39847 tataaccataacatatctaatttatttaaaatt 39815  T

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