View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8321_low_6 (Length: 247)

Name: NF8321_low_6
Description: NF8321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8321_low_6
NF8321_low_6
[»] chr1 (5 HSPs)
chr1 (43-247)||(45795438-45795642)
chr1 (43-247)||(13867537-13867741)
chr1 (48-247)||(34352637-34352854)
chr1 (184-247)||(3544964-3545027)
chr1 (48-87)||(5808973-5809012)
[»] chr4 (3 HSPs)
chr4 (43-247)||(43516452-43516656)
chr4 (183-240)||(20544305-20544362)
chr4 (178-216)||(54483016-54483054)
[»] chr3 (6 HSPs)
chr3 (43-246)||(40513428-40513631)
chr3 (167-216)||(18368801-18368850)
chr3 (48-124)||(34829774-34829850)
chr3 (184-247)||(31675144-31675207)
chr3 (184-247)||(31921213-31921276)
chr3 (177-247)||(34829633-34829703)
[»] chr2 (4 HSPs)
chr2 (146-245)||(11196567-11196666)
chr2 (55-150)||(11196680-11196775)
chr2 (167-216)||(35488082-35488131)
chr2 (167-216)||(8066072-8066121)
[»] chr6 (5 HSPs)
chr6 (43-151)||(14686712-14686820)
chr6 (167-218)||(23065893-23065944)
chr6 (167-218)||(9565610-9565661)
chr6 (184-247)||(14844000-14844063)
chr6 (183-245)||(14686870-14686932)
[»] chr7 (1 HSPs)
chr7 (183-245)||(26855929-26855991)
[»] chr5 (1 HSPs)
chr5 (184-247)||(476427-476490)
[»] scaffold0555 (1 HSPs)
scaffold0555 (184-247)||(7882-7945)
[»] scaffold0043 (1 HSPs)
scaffold0043 (184-247)||(34472-34535)
[»] chr8 (1 HSPs)
chr8 (177-245)||(9510998-9511066)


Alignment Details
Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 43 - 247
Target Start/End: Complemental strand, 45795642 - 45795438
Alignment:
Q  43 cttagttttggtatgacaggtggctgagtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctga 142  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45795642 cttacttttggtatgacaggtggctaggtgatgttcctttttgtatcagtttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctga 45795543  T
Q  143 tatggttgatggagaggcgtcgaattggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttg 242  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  45795542 tatggttgatggagaggcgtggaattggcggcgtaggttaagggtgtgggaggaggatatgctagaggagtgtaggcttttaattaatggtgtcgttttg 45795443  T
Q  243 cagtc 247  Q
    |||||    
T  45795442 cagtc 45795438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 43 - 247
Target Start/End: Original strand, 13867537 - 13867741
Alignment:
Q  43 cttagttttggtatgacaggtggctgagtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctga 142  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13867537 cttacttttggtatgacaggtggcttggtgatgttcctttttgtatcaggttccgtcgtctttttaatttagtgtctaataagttgagcacggtagctga 13867636  T
Q  143 tatggttgatggagaggcgtcgaattggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttg 242  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13867637 tatggttgttggagaggcgtggaattggcggcgtaggttaagggtgtgggaggaggatatgctagaggagtgtaggcttttaattaatggtgtcgttttg 13867736  T
Q  243 cagtc 247  Q
    |||||    
T  13867737 cagtc 13867741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 247
Target Start/End: Complemental strand, 34352854 - 34352637
Alignment:
Q  48 ttttggtatgacaggtggctgagtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctgatat-- 145  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||| ||||| |||||| | |||| |||||||||| ||||||| |||||| ||||      
T  34352854 ttttgatatgacaggtggcttggtgatgttcctttttgtatcaggttgcgtcgcctatttgacttagcgtctaataagctgagcacagtagctaatatgg 34352755  T
Q  146 ----------------ggttgatggagaggcgtcgaattggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgtaagcttttaattaa 229  Q
                    |||||| |||||||||| |   ||| |||||||||| |||||||||||||||||  ||||||||||||||| ||  |||| |||    
T  34352754 ttgcccttggtggggaggttgacggagaggcgtggggctggaggcgtaggttgagggtgtgggaggaggagatgctagaggagtgtaggcaattaactaa 34352655  T
Q  230 tggtgtcgttttgcagtc 247  Q
    ||||||||||||||||||    
T  34352654 tggtgtcgttttgcagtc 34352637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 3544964 - 3545027
Alignment:
Q  184 gggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcagtc 247  Q
    |||||||||||||||| ||| |||| ||||||| ||  ||| |||||||||| |||||||||||    
T  3544964 gggtgtgggaggaggagttggtagaagagtgtaggcaattacttaatggtgttgttttgcagtc 3545027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 5809012 - 5808973
Alignment:
Q  48 ttttggtatgacaggtggctgagtgatgttcctttttgta 87  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  5809012 ttttggtatgacaggtggcttggtgatgttcctttttgta 5808973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 43 - 247
Target Start/End: Original strand, 43516452 - 43516656
Alignment:
Q  43 cttagttttggtatgacaggtggctgagtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctga 142  Q
    |||| ||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43516452 cttacttttggtatgacaagtggcttggtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctga 43516551  T
Q  143 tatggttgatggagaggcgtcgaattggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttg 242  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  43516552 tatggttgatggagaggcgtggagttggcggcgtaggttgagggtgtgggaggaggatatgctagaggagtgtaggcatttaattaatggtgtcgttttg 43516651  T
Q  243 cagtc 247  Q
    |||||    
T  43516652 cagtc 43516656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 20544362 - 20544305
Alignment:
Q  183 agggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttt 240  Q
    |||| ||||||||||||  || |||||||||||| | |||||||||||||||||||||    
T  20544362 agggcgtgggaggaggagatgttagaggagtgtaggtttttaattaatggtgtcgttt 20544305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 54483016 - 54483054
Alignment:
Q  178 ggttaagggtgtgggaggaggatttgctagaggagtgta 216  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  54483016 ggttatgggtgtgggaggaggatttggtagaggagtgta 54483054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 43 - 246
Target Start/End: Original strand, 40513428 - 40513631
Alignment:
Q  43 cttagttttggtatgacaggtggctgagtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctga 142  Q
    |||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||||    
T  40513428 cttacttttggtatgacagatggctgggtgatgttcctttctgtatcaggttccgtcgactttttaatttagtgtctgataagttgagcacgatagctga 40513527  T
Q  143 tatggttgatggagaggcgtcgaattggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttg 242  Q
    |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  40513528 tatggttgctggagaggggtggaattggcggcgtaggttaagggtgtgggaggaggatatgctagaggagtgtaggctgttaattaatggtgtcgttttg 40513627  T
Q  243 cagt 246  Q
    ||||    
T  40513628 cagt 40513631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 18368801 - 18368850
Alignment:
Q  167 ttggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgta 216  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  18368801 ttggcggcgtaggttgtgggtgtgggaggaggctttgctagaggagtgta 18368850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 34829850 - 34829774
Alignment:
Q  48 ttttggtatgacaggtggctgagtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataa 124  Q
    ||||||||||||||||||||  ||||||| ||||||||||  ||||| |||||  ||||| || |||||||||||||    
T  34829850 ttttggtatgacaggtggcttggtgatgtccctttttgtactaggtttcgtcggttatttgatctagtgtctaataa 34829774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 31675207 - 31675144
Alignment:
Q  184 gggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcagtc 247  Q
    |||||||||||||||| ||| |||||||||||| |   ||| |||||||||| |||||||||||    
T  31675207 gggtgtgggaggaggagttggtagaggagtgtaggaaattacttaatggtgtggttttgcagtc 31675144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 31921213 - 31921276
Alignment:
Q  184 gggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcagtc 247  Q
    |||||||||||||||| ||| |||||||||||| |   ||| |||||||||| |||||||||||    
T  31921213 gggtgtgggaggaggagttggtagaggagtgtaggaaattacttaatggtgtggttttgcagtc 31921276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 34829703 - 34829633
Alignment:
Q  177 aggttaagggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcagtc 247  Q
    ||||| ||| |||||||||||||  ||||||||||||||| |   ||| |||||||||| |||||||||||    
T  34829703 aggttgaggctgtgggaggaggagatgctagaggagtgtaggaaattacttaatggtgttgttttgcagtc 34829633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 11196666 - 11196567
Alignment:
Q  146 ggttgatggagaggcgtcgaattggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcag 245  Q
    |||||| |||||||||| |  |||| |||| | ||| |||||||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||    
T  11196666 ggttgacggagaggcgtggggttggaggcgaatgttgagggtgtgggaggaggagatgctagaggagtgtaggcaattaattaatggtgtcgttttgcag 11196567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 11196775 - 11196680
Alignment:
Q  55 atgacaggtggctgagtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctgatatggttg 150  Q
    |||| ||||||||  |||||  ||||||||||| |||||||||| || ||||| | |||| |||||||||  |||| ||||| |||||||||||||    
T  11196775 atgataggtggcttggtgatactcctttttgtaccaggttccgttgtttatttgacttagcgtctaataaactgagtacggtggctgatatggttg 11196680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 35488131 - 35488082
Alignment:
Q  167 ttggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgta 216  Q
    |||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  35488131 ttggcggcgtaggttgtgggcgtgggaggaggctttgctagaggagtgta 35488082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 8066072 - 8066121
Alignment:
Q  167 ttggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgta 216  Q
    |||||||||||||||  ||| ||||||||||| | |||||||||||||||    
T  8066072 ttggcggcgtaggttgtgggcgtgggaggaggctatgctagaggagtgta 8066121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 14686712 - 14686820
Alignment:
Q  43 cttagttttggtatgacaggtggctgagtgatgttcctttttgtatcaggttccgtcgtctatttaatttagtgtctaataagttgagcacggtagctga 142  Q
    |||| ||||||||||||||||||||  |||||   ||||||||||  || ||||||||| | ||| ||||||  |||||||| |||||||| || |||||    
T  14686712 cttacttttggtatgacaggtggcttggtgatacacctttttgtactagattccgtcgtttgtttgatttagcatctaataaattgagcactgtggctga 14686811  T
Q  143 tatggttga 151  Q
    |||||||||    
T  14686812 tatggttga 14686820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 23065893 - 23065944
Alignment:
Q  167 ttggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgtaag 218  Q
    |||||||||| ||||  ||| |||||||||||||||||||||||||||||||    
T  23065893 ttggcggcgtcggttgtgggcgtgggaggaggatttgctagaggagtgtaag 23065944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 9565661 - 9565610
Alignment:
Q  167 ttggcggcgtaggttaagggtgtgggaggaggatttgctagaggagtgtaag 218  Q
    |||| ||||||||||  ||| ||||||||||| |||||||||||||||||||    
T  9565661 ttggaggcgtaggttgtgggcgtgggaggaggctttgctagaggagtgtaag 9565610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 14844000 - 14844063
Alignment:
Q  184 gggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcagtc 247  Q
    |||||||||||||||| ||| |||| ||||||| ||  ||| |||||||||| |||||||||||    
T  14844000 gggtgtgggaggaggagttggtagaagagtgtaggcaattacttaatggtgttgttttgcagtc 14844063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 14686870 - 14686932
Alignment:
Q  183 agggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcag 245  Q
    |||| ||||||||| ||  || |||||||||||| | ||||||||||||||||| ||||||||    
T  14686870 agggcgtgggaggatgagctgttagaggagtgtagggttttaattaatggtgtcattttgcag 14686932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 26855991 - 26855929
Alignment:
Q  183 agggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcag 245  Q
    |||| ||||||||||||  || |||||||||||| ||||||||||||||||||| ||||||||    
T  26855991 agggcgtgggaggaggagctgttagaggagtgtaggcttttaattaatggtgtcattttgcag 26855929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 476490 - 476427
Alignment:
Q  184 gggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcagtc 247  Q
    |||||||||||||||| ||| |||||||||||| ||  ||| |||||||||| |||||||||||    
T  476490 gggtgtgggaggaggagttggtagaggagtgtaggcaattacttaatggtgttgttttgcagtc 476427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 7945 - 7882
Alignment:
Q  184 gggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcagtc 247  Q
    |||||||||||||||| ||| |||||||||||| ||  ||| |||||| ||| |||||||||||    
T  7945 gggtgtgggaggaggagttggtagaggagtgtaggcaattacttaatgttgttgttttgcagtc 7882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 34472 - 34535
Alignment:
Q  184 gggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcagtc 247  Q
    |||||||||||||||| ||| |||||||||||| ||  ||| |||||||||| ||||| |||||    
T  34472 gggtgtgggaggaggagttggtagaggagtgtaggcaattacttaatggtgttgttttacagtc 34535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 9511066 - 9510998
Alignment:
Q  177 aggttaagggtgtgggaggaggatttgctagaggagtgtaagcttttaattaatggtgtcgttttgcag 245  Q
    ||||| |||||||||||||||||  || |||||||||||| ||  ||  |||||||||| |||||||||    
T  9511066 aggttgagggtgtgggaggaggagatgttagaggagtgtaggcaattgcttaatggtgttgttttgcag 9510998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University