View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8322_low_3 (Length: 226)

Name: NF8322_low_3
Description: NF8322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8322_low_3
NF8322_low_3
[»] chr1 (23 HSPs)
chr1 (102-226)||(5979710-5979834)
chr1 (1-101)||(27564653-27564752)
chr1 (1-101)||(41758888-41758987)
chr1 (1-97)||(50630541-50630636)
chr1 (1-100)||(37649281-37649379)
chr1 (1-101)||(9474794-9474893)
chr1 (1-97)||(32813330-32813425)
chr1 (1-101)||(48716200-48716299)
chr1 (1-101)||(2581998-2582097)
chr1 (1-101)||(47452238-47452337)
chr1 (1-101)||(43215-43314)
chr1 (2-101)||(8346305-8346404)
chr1 (1-85)||(38632255-38632338)
chr1 (1-97)||(49811449-49811544)
chr1 (16-81)||(45044498-45044562)
chr1 (4-102)||(3000405-3000502)
chr1 (16-85)||(37926372-37926440)
chr1 (4-101)||(38595240-38595336)
chr1 (1-97)||(51898605-51898700)
chr1 (3-97)||(44454064-44454161)
chr1 (1-51)||(44548343-44548393)
chr1 (1-85)||(11152312-11152395)
chr1 (29-101)||(26274540-26274611)
[»] chr8 (22 HSPs)
chr8 (1-101)||(12831130-12831229)
chr8 (1-101)||(504039-504138)
chr8 (1-101)||(34012214-34012313)
chr8 (1-102)||(23122514-23122614)
chr8 (1-101)||(14548005-14548104)
chr8 (1-101)||(9122268-9122367)
chr8 (1-97)||(40423865-40423960)
chr8 (1-103)||(15197416-15197517)
chr8 (16-101)||(42710212-42710296)
chr8 (16-101)||(44507006-44507089)
chr8 (1-101)||(1179858-1179957)
chr8 (1-97)||(8841354-8841449)
chr8 (1-97)||(43414503-43414598)
chr8 (1-97)||(5957913-5958008)
chr8 (2-97)||(4854785-4854879)
chr8 (6-97)||(42354510-42354600)
chr8 (1-97)||(10284553-10284648)
chr8 (1-97)||(37038562-37038657)
chr8 (1-46)||(10621059-10621104)
chr8 (1-85)||(15048115-15048199)
chr8 (1-98)||(24307714-24307810)
chr8 (1-97)||(16056323-16056418)
[»] chr6 (16 HSPs)
chr6 (1-101)||(11427701-11427800)
chr6 (1-101)||(22880576-22880675)
chr6 (1-101)||(17598637-17598736)
chr6 (1-101)||(29857910-29858009)
chr6 (1-97)||(31976331-31976426)
chr6 (1-101)||(32869761-32869860)
chr6 (3-101)||(23128044-23128142)
chr6 (16-98)||(15832675-15832756)
chr6 (1-53)||(6209430-6209482)
chr6 (2-97)||(31110683-31110777)
chr6 (3-81)||(28536426-28536503)
chr6 (3-97)||(31952952-31953045)
chr6 (7-100)||(946465-946557)
chr6 (16-67)||(31109352-31109402)
chr6 (55-97)||(22422001-22422043)
chr6 (1-97)||(4231631-4231726)
[»] chr4 (18 HSPs)
chr4 (1-101)||(6034127-6034226)
chr4 (1-101)||(41236430-41236529)
chr4 (1-101)||(48182967-48183066)
chr4 (1-101)||(42044285-42044384)
chr4 (1-101)||(24995025-24995124)
chr4 (1-97)||(41823965-41824060)
chr4 (1-99)||(54473453-54473550)
chr4 (4-85)||(40574865-40574945)
chr4 (1-101)||(11511381-11511479)
chr4 (1-97)||(31910275-31910370)
chr4 (3-101)||(23608320-23608417)
chr4 (3-97)||(29239971-29240064)
chr4 (1-54)||(29234209-29234262)
chr4 (4-67)||(480399-480461)
chr4 (1-97)||(50052350-50052445)
chr4 (1-101)||(53352492-53352583)
chr4 (1-97)||(50526093-50526188)
chr4 (1-97)||(19670638-19670733)
[»] chr7 (24 HSPs)
chr7 (1-101)||(19329925-19330024)
chr7 (1-101)||(4999432-4999531)
chr7 (1-101)||(8080301-8080400)
chr7 (1-101)||(32951411-32951510)
chr7 (1-101)||(38837300-38837399)
chr7 (4-101)||(40957793-40957889)
chr7 (1-101)||(35137616-35137715)
chr7 (1-97)||(35522959-35523054)
chr7 (1-92)||(19436114-19436204)
chr7 (16-97)||(46033723-46033803)
chr7 (1-79)||(31735960-31736037)
chr7 (1-101)||(38267123-38267222)
chr7 (1-63)||(3784078-3784139)
chr7 (1-101)||(7389472-7389570)
chr7 (1-101)||(11044261-11044360)
chr7 (1-63)||(3694450-3694511)
chr7 (32-101)||(3434666-3434734)
chr7 (16-97)||(41423780-41423860)
chr7 (29-101)||(36362125-36362196)
chr7 (3-97)||(16374746-16374839)
chr7 (56-101)||(36361843-36361888)
chr7 (1-97)||(21234484-21234579)
chr7 (38-97)||(46374746-46374804)
chr7 (16-85)||(26296742-26296810)
[»] chr5 (20 HSPs)
chr5 (1-101)||(33149556-33149655)
chr5 (1-101)||(2740357-2740456)
chr5 (1-101)||(18520802-18520901)
chr5 (1-101)||(40145490-40145589)
chr5 (1-103)||(14831897-14831998)
chr5 (1-97)||(15409532-15409627)
chr5 (1-101)||(35785282-35785381)
chr5 (1-102)||(13811735-13811834)
chr5 (1-85)||(36732876-36732959)
chr5 (1-81)||(26720599-26720678)
chr5 (1-81)||(26990348-26990427)
chr5 (16-97)||(6679796-6679876)
chr5 (1-97)||(31009071-31009166)
chr5 (1-97)||(36875538-36875629)
chr5 (3-85)||(33825258-33825339)
chr5 (3-97)||(35943814-35943907)
chr5 (32-101)||(31132448-31132516)
chr5 (3-79)||(2177449-2177524)
chr5 (55-101)||(16115250-16115296)
chr5 (1-54)||(28177858-28177911)
[»] chr3 (24 HSPs)
chr3 (1-101)||(31456772-31456871)
chr3 (1-101)||(33644283-33644382)
chr3 (1-101)||(53982094-53982193)
chr3 (4-97)||(20764837-20764929)
chr3 (3-108)||(49607499-49607603)
chr3 (3-101)||(17470490-17470587)
chr3 (1-97)||(8076476-8076571)
chr3 (1-101)||(54868813-54868912)
chr3 (4-101)||(52629386-52629482)
chr3 (16-100)||(36707347-36707430)
chr3 (1-97)||(51419282-51419377)
chr3 (6-97)||(11347844-11347934)
chr3 (29-101)||(11095285-11095356)
chr3 (3-97)||(30801655-30801748)
chr3 (3-97)||(35536711-35536804)
chr3 (2-99)||(9563083-9563179)
chr3 (1-97)||(41189686-41189781)
chr3 (1-97)||(47531948-47532043)
chr3 (29-100)||(27714822-27714892)
chr3 (2-97)||(35965704-35965798)
chr3 (3-97)||(26141452-26141547)
chr3 (32-101)||(48587019-48587087)
chr3 (3-97)||(14623761-14623854)
chr3 (1-97)||(36331251-36331346)
[»] chr2 (26 HSPs)
chr2 (1-101)||(10249300-10249399)
chr2 (1-101)||(13438426-13438525)
chr2 (1-101)||(17473103-17473202)
chr2 (1-111)||(28863538-28863647)
chr2 (1-101)||(19930738-19930837)
chr2 (1-101)||(32505566-32505665)
chr2 (1-102)||(9058563-9058663)
chr2 (3-101)||(7465653-7465750)
chr2 (1-99)||(33436020-33436117)
chr2 (1-101)||(28381573-28381672)
chr2 (1-101)||(38882729-38882828)
chr2 (1-101)||(40701561-40701660)
chr2 (1-101)||(4060768-4060867)
chr2 (1-97)||(20700898-20700993)
chr2 (1-97)||(36168919-36169014)
chr2 (4-102)||(30915549-30915646)
chr2 (1-89)||(2533206-2533293)
chr2 (1-97)||(40613824-40613919)
chr2 (1-92)||(38273070-38273159)
chr2 (29-101)||(5574418-5574489)
chr2 (1-92)||(42257276-42257366)
chr2 (3-97)||(44152012-44152105)
chr2 (16-97)||(41758685-41758765)
chr2 (38-101)||(27864811-27864873)
chr2 (139-185)||(44728659-44728705)
chr2 (1-97)||(13365436-13365531)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-101)||(4112-4211)
[»] scaffold0321 (1 HSPs)
scaffold0321 (4-101)||(10027-10123)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-97)||(851-946)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-97)||(851-946)
[»] scaffold0110 (1 HSPs)
scaffold0110 (16-97)||(8785-8865)


Alignment Details
Target: chr1 (Bit Score: 117; Significance: 9e-60; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 5979710 - 5979834
Alignment:
Q  102 gtcaaaatataccataggagcggcaaaactctaccttaagagatagatagagagaaaatatggtgtagaatgagtgtatgaaaatcaagagtgtacaaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5979710 gtcaaaatataccataggagcggcaaaactctaccttaagagatagatagagagaaaatatggtgtagaatgagtgtatgaaaatcaagggtgtacaaat 5979809  T
Q  202 atgttgggatgtgatgtgttgatga 226  Q
    ||||| |||||||||||||||||||    
T  5979810 atgttaggatgtgatgtgttgatga 5979834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27564752 - 27564653
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  27564752 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 27564654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41758888 - 41758987
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  41758888 cgcacaaacacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattact 41758986  T

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Target: chr1; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 50630541 - 50630636
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||| |||| ||||||    
T  50630541 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-agggtgtacaagggtgtatgagaataaatggtgtctatgcatcatt 50630636  T

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Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 37649281 - 37649379
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  || |||||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  37649281 cgcacaagcacactttcccttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 37649379  T

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Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9474893 - 9474794
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||||||||||  |||| ||||||||||||||    
T  9474893 cgcacaaacacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacaagggtgtatgagaataaagagtgtctatgtatcattact 9474795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 32813330 - 32813425
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||| || |||||||||||||||| ||| ||||||||||||| |||||| ||||    
T  32813330 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 32813425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 48716299 - 48716200
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  | |||||||| |||||||||| ||||||||||||||||| |||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  48716299 cgcacaagcacactttatcttttctttcctcttctctcttcctaatgcatgggg-tgtacaagggtgtatgggaataaagggtgtctatgtatcattact 48716201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2581998 - 2582097
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||| ||||||||||||||||| ||||||||| |||| || |||||||||||| || |||||||| ||||| ||||||||||||||    
T  2581998 cgcacaagcacactttcttttttctctcctcttctctcttcctaatacatgagg-tgtacaagggtgtattagaataaagggtgtttatgtatcattact 2582096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 47452337 - 47452238
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||| ||||| ||||||||||||| || ||| |||||||  |||| ||||||||||||||    
T  47452337 cgcacaagcacactttctcttttctctcctcttctctcttcctattgcat-ggggtgtacaaggatgtatgggaataaagagtgtctatgtatcattact 47452239  T

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Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43215 - 43314
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||||||||||||| |||| ||| ||||||||| |||||||||||| ||| || |||||||| ||| | ||||||||||||||    
T  43215 cgcacaagcacactttctcttttctctcctcctctctctttctaatgcat-ggggtgtacaagagtgtataagaataaagggtatctatgtatcattact 43313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 8346404 - 8346305
Alignment:
Q  2 gcacaagcacacagtctcttttctctcctcttctcc-cttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||||||||  |||||||||||||||||| | | ||||||||||||||| | ||||||| |||| ||||||||||||||| | ||||||||||||||    
T  8346404 gcacaagcacactttctcttttctctcctctttttctcttcctaatgcatggag-tgtacaaaggtgtatgagaataaatggtatttatgtatcattact 8346306  T

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Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38632338 - 38632255
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgt 85  Q
    |||||||||||||  | ||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||| |||||    
T  38632338 cgcacaagcacactttttcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgt 38632255  T

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Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 49811544 - 49811449
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||| || | |||| ||||||||| ||||||||||| ||||| |||||| ||||    
T  49811544 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-gtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatt 49811449  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 45044562 - 45044498
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatg 81  Q
    |||||||||||| |||||||| |||||||||| || |||||||||||||||| |||||||||||||    
T  45044562 tctcttttctcttctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgagaataaatg 45044498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 3000405 - 3000502
Alignment:
Q  4 acaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactcg 102  Q
    ||||||||||  ||||||||||||| ||||||| |||||||||  || |||||||||||||||| |||  |||||  | ||| ||||||||||||||||    
T  3000405 acaagcacactttctcttttctctcatcttctctcttcctaatatat-ggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactcg 3000502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 37926440 - 37926372
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgt 85  Q
    |||||||||||| |||||||| |||||||||| || ||||||||||||| || ||| |||||||||||||    
T  37926440 tctcttttctcttctcttctctcttcctaatgtat-ggggtgtacaaggatgtatgtgaataaatggtgt 37926372  T

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Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 38595240 - 38595336
Alignment:
Q  4 acaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||||||||  ||||||||||||| ||||||| |||||||||  || |||||||||||||||| |||  |||||  | ||| |||||||||||||||    
T  38595240 acaagcacactttctcttttctctcatcttctctcttcctaatatat-ggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactc 38595336  T

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Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 51898700 - 51898605
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||| ||   |||||| ||||| |||||| ||||    
T  51898700 cgcacaagcacactttctatttcctctcctcttctctcttcctagtgcat-ggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 51898605  T

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Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 44454064 - 44454161
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggg---gtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||  | ||||| ||||| ||||||| |||||||||||||||||   | ||| ||||||| || |||||||||||||| |||||| ||||    
T  44454064 cacaagcacactttttctttcctctcatcttctctcttcctaatgcatggggtcagagtataagggtgtataagaataaatggtgtttatgtaacatt 44454161  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44548393 - 44548343
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatg 51  Q
    |||||||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  44548393 cgcacaagcacactttctcttttctctcttcttctctcttcctaatgcatg 44548343  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11152395 - 11152312
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgt 85  Q
    ||||||||||| |  ||| ||| ||||||||||||| ||||| | ||||||||| |||| |||| || |||||||||||||||||    
T  11152395 cgcacaagcacgctttctttttcctctcctcttctctcttcccagtgcatgggg-tgtagaaggatgtatgagaataaatggtgt 11152312  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 26274540 - 26274611
Alignment:
Q  29 ctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    |||||||| |||||||||||||| |  || ||||||||| ||| ||||||| ||||| |||||||||||||||    
T  26274540 ctcttctctcttcctaatgcatgaga-tgcacaagggtgtatgggaataaagggtgtctatgtatcattactc 26274611  T

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Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12831130 - 12831229
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  12831130 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaatggtgtctatgtatcattact 12831228  T

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Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 504138 - 504039
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  504138 cgcacaagcacacattctcttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattact 504040  T

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Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34012313 - 34012214
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| | ||||||||| ||||| ||||||||||||||    
T  34012313 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattact 34012215  T

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Target: chr8; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23122614 - 23122514
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||| ||||||||  ||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  23122614 cgcataagcacactttctcttttctctcctgttctctcttcctaatgcatgggg-tgtacaagggtgtatgagaataaagggtgtctatgtatcattact 23122516  T
Q  101 cg 102  Q
    ||    
T  23122515 cg 23122514  T

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Target: chr8; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14548005 - 14548104
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||| ||||||| ||||| ||||||||||||||    
T  14548005 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattact 14548103  T

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Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9122268 - 9122367
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||| |||||||   ||| ||||||||||||||    
T  9122268 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagagtgtatgggaataaagaatgtctatgtatcattact 9122366  T

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Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 40423960 - 40423865
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||| ||| | |||||||||||||| ||| ||||||| ||||| |||||||||||    
T  40423960 cgcacaagcacactttctcttttctctcctcttctctcttcctaatacat-gaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 40423865  T

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Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15197416 - 15197517
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||||||||||||||| || ||||| ||||||| | |||||||||||||| ||| |||||||  |||| ||||||||||||||    
T  15197416 cgcacaagcacactttctcttttctctcctcttttctcttccaaatgcat-gaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcattact 15197514  T
Q  101 cgt 103  Q
    |||    
T  15197515 cgt 15197517  T

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Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 42710296 - 42710212
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||||||| ||| ||||||| ||||| | |||||||||||||    
T  42710296 tctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcattactc 42710212  T

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Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 44507089 - 44507006
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||  ||| |||||||||||||||    
T  44507089 tctcttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaat-atgtctatgtatcattactc 44507006  T

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Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1179957 - 1179858
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||| |  ||| ||||||| | ||| ||| ||||||||||    
T  1179957 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggatatatgggaataaaggatgtctatctatcattact 1179859  T

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Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8841449 - 8841354
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||| |||||||||||||  |||||| ||||||||| |||||||| ||| ||||||||||||||||| |||||| ||||    
T  8841449 cgcacaagcacactttctctttcctctcctcttctcttttcctagtgcatgggg-tgtacaagagtgtatgagaataaatggtgtctatgtaacatt 8841354  T

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Target: chr8; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 43414598 - 43414503
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||| || |||||||||||||||| |||  |||||| ||||| |||||| ||||    
T  43414598 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatggcaataaagggtgtctatgtaacatt 43414503  T

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Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 5957913 - 5958008
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||| |||||  ||||||| ||||||||||||| ||||||| |||||| || |||||||||||| ||||||||||| ||||| |||||| ||||    
T  5957913 cgcacaatcacactttctctttcctctcctcttctctcttcctagtgcatgagg-tgtacaagggtgtatgagaataaagggtgtttatgtaacatt 5958008  T

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Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 4854879 - 4854785
Alignment:
Q  2 gcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||||||  ||||||||||||||||||||| ||| |||||| || ||| |||||||||||  |||||||||||  |||| |||||| ||||    
T  4854879 gcacaagcacactttctcttttctctcctcttctctcttactaatgtat-gggatgtacaagggtatatgagaataaagagtgtctatgtaacatt 4854785  T

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Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 42354600 - 42354510
Alignment:
Q  6 aagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||  |||||||  ||| |||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||||||| |||||| ||||    
T  42354600 aagcacactttctctttcatcttctcttctctcttcctagtgcatgggg-tgtagaagggtgtatgagaataaatggtgtctatgtaacatt 42354510  T

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Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10284648 - 10284553
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||| || || ||||||| ||||||| ||||| ||||||||||||| || || |||||||| ||||| |||||| ||||    
T  10284648 cgcacaagcacactttctctttcctttcatcttctctcttcctagtgcat-ggggtgtacaaggttgtataagaataaaaggtgtctatgtaacatt 10284553  T

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Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37038562 - 37038657
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||| ||   |||||| ||||| |||||| ||||    
T  37038562 cgcacaagcacactttctatttcctctcctcttctctcttcctagtgcat-ggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 37038657  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10621104 - 10621059
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaat 46  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||    
T  10621104 cgcacaagcacactttctcttttctctcctcttctctcttcctaat 10621059  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15048199 - 15048115
Alignment:
Q  1 cgcacaagcacacagtctcttttc-tctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgt 85  Q
    |||||||||||||  ||||||||  |||||||||||| |||||||||| || ||| |||||||||||| ||  ||||||| |||||    
T  15048199 cgcacaagcacactttctctttttatctcctcttctctcttcctaatgtat-gggatgtacaagggtgtatcggaataaagggtgt 15048115  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24307810 - 24307714
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatta 98  Q
    |||||||| ||||  |||||||  ||| |||||||| ||||||||| ||||||| |||||||||||| |||  | |||| ||||| |||||| |||||    
T  24307810 cgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgggg-tgtacaagggtgtatgcaattaaaaggtgtctatgtaacatta 24307714  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16056418 - 16056323
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||| ||||  |||||||  ||| |||||||| ||||||||| ||||||| |||||||||||| |||  | |||| ||||| |||||| ||||    
T  16056418 cgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgggg-tgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 16056323  T

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Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11427701 - 11427800
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  11427701 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattact 11427799  T

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Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22880675 - 22880576
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  22880675 cgcacaagcacactttctcttttctctcctcttctctcttcctaatacatgggg-tgtacaagggtgtatgggaataaatggtgtatatgtatcattact 22880577  T

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Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17598637 - 17598736
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||  |||||| ||||| ||||||||||||||    
T  17598637 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattact 17598735  T

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Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29857910 - 29858009
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||| ||||||||  |||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||    
T  29857910 cgcataagcacactttctcttttctcttctcttctctcttcctaatgcatgggg-tgtacaagggtgtatgggaataaatggtgtctatgtatcattact 29858008  T

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Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31976331 - 31976426
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||||||||||| |||||| ||||    
T  31976331 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 31976426  T

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Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32869761 - 32869860
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||| ||||||| ||||| ||||||||||||||    
T  32869761 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattact 32869859  T

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Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 23128142 - 23128044
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatgg-tgtatatgtatcattactc 101  Q
    |||||||||||  |||||||||||||||||| || ||||||||||||| ||| |||||||||||| |||  |||||| || | | |||||||||||||||    
T  23128142 cacaagcacactttctcttttctctcctcttttctcttcctaatgcat-gggatgtacaagggtgtatggaaataaaaggttctctatgtatcattactc 23128044  T

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Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 15832675 - 15832756
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatta 98  Q
    |||||||| |||||||||||  ||||||||||||| |||||||||||||||| ||  ||||||| ||||| || |||||||||    
T  15832675 tctcttttttctcctcttctatcttcctaatgcat-ggggtgtacaagggtgtattggaataaagggtgtctacgtatcatta 15832756  T

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Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6209482 - 6209430
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatggg 53  Q
    ||||| |||||||  ||||||||||||||||||||| ||||||||||||||||    
T  6209482 cgcactagcacactttctcttttctctcctcttctctcttcctaatgcatggg 6209430  T

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Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 31110777 - 31110683
Alignment:
Q  2 gcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||||||  |||||||||||| |||||||| |||||||||| || ||||||||||| |||| |||  |||||| | ||| |||||| ||||    
T  31110777 gcacaagcacactttctcttttctctactcttctctcttcctaatgtat-ggggtgtacaaaggtgtatggaaataaaggatgtctatgtaacatt 31110683  T

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Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 28536503 - 28536426
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatg 81  Q
    |||||||||||  |||||||| ||| |||||| | ||||||| ||||| |||||||||||||||| |||| ||||||||    
T  28536503 cacaagcacactttctcttttatcttctcttccctcttcctactgcat-ggggtgtacaagggtgtatgaaaataaatg 28536426  T

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Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 31953045 - 31952952
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||| |||||  |||||||  ||| |||||||| ||||||| ||||||||| |||| |||| || ||||||||||||||||| |||||| ||||    
T  31953045 cacaaacacactttctctttcatcttctcttctctcttcctagtgcatgggg-tgtagaaggatgtatgagaataaatggtgtctatgtaacatt 31952952  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 946465 - 946557
Alignment:
Q  7 agcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||  ||||||||||||||||||||| ||||||||||||| | | ||||||||  || |||| ||||||  ||||  |||||||||||||    
T  946465 agcacactttctcttttctctcctcttctctcttcctaatgcat-gagatgtacaagaatgtatgacaataaaaagtgtcaatgtatcattact 946557  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 31109402 - 31109352
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtg 67  Q
    |||||||||||||||||| || ||||||||||||| ||||| ||||||||||    
T  31109402 tctcttttctctcctcttttctcttcctaatgcat-ggggtatacaagggtg 31109352  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 22422043 - 22422001
Alignment:
Q  55 gtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||    
T  22422043 gtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 22422001  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4231631 - 4231726
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||| ||||  |||||||  ||| |||||||| ||||||||| ||||||| |||||||||||| |||  | |||| ||||| |||||| ||||    
T  4231631 cgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgggg-tgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 4231726  T

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Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 6034127 - 6034226
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  6034127 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcattact 6034225  T

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Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41236430 - 41236529
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  41236430 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 41236528  T

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Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 48183066 - 48182967
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| |||| |||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  48183066 cgcacaagcacactttctcttttctctcctcttctctcttcttaatgcatgggg-tgtacaagggtgtatgagaataaagggtgtctatgtatcattact 48182968  T

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Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42044384 - 42044285
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||  |||||| ||||| ||||||||||||||    
T  42044384 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacaagggtgtatggaaataaagggtgtctatgtatcattact 42044286  T

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Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24995124 - 24995025
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||||||||   ||||||||||||||||||||| |||| |||||||| ||||||||||| |||| ||| ||||||| ||||| ||||||||||||||    
T  24995124 cgcacaagcacattttctcttttctctcctcttctctcttcttaatgcat-ggggtgtacaatggtgtatgggaataaagggtgtctatgtatcattact 24995026  T

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Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41823965 - 41824060
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||| ||||||| ||||||||||||| | ||||||||| |||| ||||||||||||||||| |||||| ||||    
T  41823965 cgcacaagcacactttctcttttctctcttcttctctcttcctaatgcat-gaggtgtacaaaggtgtatgagaataaatggtgtctatgtaacatt 41824060  T

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Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 54473550 - 54473453
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattac 99  Q
    |||||||||||||  | ||||||||||||||||||| ||||||||| ||| || ||||||||||||| ||| ||||||| |||||  ||||||||||||    
T  54473550 cgcacaagcacactttatcttttctctcctcttctctcttcctaatacat-ggagtgtacaagggtgtatgggaataaagggtgttcatgtatcattac 54473453  T

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Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 40574865 - 40574945
Alignment:
Q  4 acaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgt 85  Q
    ||||||||||  ||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||||| |||||    
T  40574865 acaagcacactttctcttttctctcctcttctctcttcctaatatat-ggggtgtacaagggtgtatgagaataaaaggtgt 40574945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11511479 - 11511381
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||||||||| |||||||| |||| |||||||| | |||||||||||||| |||  ||||||| |||| ||||||||||||||    
T  11511479 cgcacaagcacactttctcttttctcttctcttctctcttcttaatgcat-gaggtgtacaagggtgtatggaaataaat-gtgtctatgtatcattact 11511382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31910275 - 31910370
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||| ||||||| |||||||||| || ||| |||||||| ||| ||| ||||||||||||| |||||| ||||    
T  31910275 cgcacaagcacactttctcttttctctcatcttctctcttcctaatgtat-gggatgtacaagagtgtatgggaataaatggtgtctatgtaacatt 31910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 23608320 - 23608417
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    |||||||||||  |||||||| |||||||||||| ||||||||||||| | |||||||| || || ||| ||||||| | ||| |||||||||||||||    
T  23608320 cacaagcacactttctcttttatctcctcttctctcttcctaatgcat-gaggtgtacagggatgtatgggaataaaggatgtctatgtatcattactc 23608417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 29239971 - 29240064
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||  ||||||| ||||||||||||| ||||||| ||||| |||||||||||| ||| ||| ||||||| ||||| |||||| ||||    
T  29239971 cacaagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaagagtgtatgggaataaagggtgtctatgtaacatt 29240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29234262 - 29234209
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggg 54  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  29234262 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgggg 29234209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 480461 - 480399
Alignment:
Q  4 acaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtg 67  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  480461 acaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaaggtg 480399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 50052445 - 50052350
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||| ||||||||||||| ||||||| |||||   ||||||||| |||| ||| ||||||| ||||| |||||| ||||    
T  50052445 cgcacaagcacactttctctttcctctcctcttctctcttcctagtgcat-aaggtgtacaaaggtgtatgggaataaagggtgtctatgtaacatt 50052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 53352583 - 53352492
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||| ||  ||||||||||||||||||||| |||||||         |||||||||||||| |||| |||||| ||||| ||||||||||||||    
T  53352583 cgcacaagcatactttctcttttctctcctcttctctcttccta---------ggtgtacaagggtgtatgaaaataaagggtgtctatgtatcattact 53352493  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 50526188 - 50526093
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||||| |  ||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||| ||   |||||| ||||| |||||| ||||    
T  50526188 cgcacaagcacgctttctatttcctctcctcttctctcttcctagtgcat-ggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 50526093  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 19670733 - 19670638
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||| ||||  |||||||  ||| |||||||| ||||||||| ||||||| |||||||||||| |||  | |||| ||||| |||||| ||||    
T  19670733 cgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgggg-tgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 19670638  T

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Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19329925 - 19330024
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  19329925 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 19330023  T

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Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4999531 - 4999432
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||| |||||  |||||||| |||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  4999531 cgcacaaacacactttctcttttatctcctcttctctcttcctaatgcatgggg-tgtacaagggtgtatgagaataaaaggtgtctatgtatcattact 4999433  T

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Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8080400 - 8080301
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||| ||||| |||||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  8080400 cgcacaagcacactttctcttttctctcctcttctctcttcctattgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 8080302  T

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Target: chr7; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32951510 - 32951411
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||  ||||| ||||||||||||||    
T  32951510 cgcacaagcacactttctcttttctctcctcttctctcttcctaatacat-ggggtgtacaagggtgtatgagaataaggggtgtctatgtatcattact 32951412  T

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Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38837300 - 38837399
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||  |||||| ||||| ||||||||||||||    
T  38837300 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacaagggtgtatggaaataaagggtgtctatgtatcattact 38837398  T

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Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 40957793 - 40957889
Alignment:
Q  4 acaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||||||||  ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||| |||||  ||||| |||||||||||||||    
T  40957793 acaagcacactttctcttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcattactc 40957889  T

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Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35137616 - 35137715
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||| ||||||| | |||| |||||||||    
T  35137616 cgcacaaacacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacaagggtgtatgagaacaaatggtatctatggatcattact 35137714  T

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Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 35522959 - 35523054
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||| ||||||| |||||||||| || |||||||||||||||| ||| ||||||||||||| |||||| ||||    
T  35522959 cgcacaagcacactttctcttttctctcttcttctctcttcctaatgtat-ggggtgtacaagggtgtatgggaataaatggtgtttatgtaacatt 35523054  T

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Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19436204 - 19436114
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgta 92  Q
    |||| ||||||||  |||||||||||| ||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  19436204 cgcataagcacactttctcttttctcttctcttttctcttcctaatgcatgggg-tgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

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Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 46033803 - 46033723
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||||||||||  ||||||||| |||||| |||||||||||| ||||||||||||||||| |||||| ||||    
T  46033803 tctcttttctctcctcttctctattcctaatgtatgggg-tgtacaagggtgtatgagaataaatggtgtctatgtaacatt 46033723  T

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Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31735960 - 31736037
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaa 79  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||| || |||||||||||||||| ||| |||||||    
T  31735960 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgggaataaa 31736037  T

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Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38267123 - 38267222
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||| ||||| | |||| |||  |||||||| | | ||||||||||||||    
T  38267123 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gggatgtacgaaggtgtatggaaataaatgatatctatgtatcattact 38267221  T

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Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3784078 - 3784139
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaag 63  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  3784078 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaag 3784139  T

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Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7389472 - 7389570
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||||||||||||  |||| ||||||||| ||| ||||||||| |||||| ||| ||||||| | ||| ||||||||||||||    
T  7389472 cgcacaagcacactttctcttttctctcctactctctcttcctaatacat-ggggtgtac-agggtgtatgggaataaaggatgtctatgtatcattact 7389569  T

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Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11044261 - 11044360
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||| ||||  ||||||| ||||| ||||||| ||||||||||||| | ||||||||| |||| |||| ||||||  |||| ||||||||||||||    
T  11044261 cgcacaagtacactttctctttcctctcatcttctctcttcctaatgcat-gaggtgtacaaaggtgtatgaaaataaagagtgtctatgtatcattact 11044359  T

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Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3694450 - 3694511
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaag 63  Q
    |||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  3694450 cgcacaagcacactttctcttttctctcctcttctctcttcccaatgcat-ggggtgtacaag 3694511  T

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Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 3434666 - 3434734
Alignment:
Q  32 ttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||| ||||||||||||||||| ||||||||| || ||| ||||||| ||||| |||||||||||||||    
T  3434666 ttctctcttcctaatgcatgggg-tgtacaaggctgtatgggaataaagggtgtctatgtatcattactc 3434734  T

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Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 41423780 - 41423860
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||  |||||||||||| ||||||| ||||||||| ||||||| |||| ||||||||||| ||||| |||||| ||||    
T  41423780 tctctttcatctcctcttctctcttcctagtgcatgggg-tgtacaaaggtgtatgagaataaagggtgtttatgtaacatt 41423860  T

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Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 36362125 - 36362196
Alignment:
Q  29 ctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||| || ||||||||| ||||||  |||||||||||| ||||||||||| ||||| |||||||||||||||    
T  36362125 ctcttttctcttcctaatacatggga-tgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 36362196  T

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Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 16374839 - 16374746
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||| |||||||  |||| | ||||| |||||||||| |||| | ||||||| |||| ||||||||||| ||||| |||||| ||||    
T  16374839 cacaagcacacattctctttcatctctttttctctcttcctaatgtatggag-tgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 16374746  T

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Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 36361888 - 36361843
Alignment:
Q  56 tgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||    
T  36361888 tgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 36361843  T

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Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21234484 - 21234579
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||||||   ||||||  ||||||| | ||| |||||||||| |||||| ||||||| |||| ||||||||||| ||||| |||||| ||||    
T  21234484 cgcacaagcacattttctcttacctctcctttcctctcttcctaatgtatgggg-tgtacaatggtgtatgagaataaaaggtgtctatgtaacatt 21234579  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 46374804 - 46374746
Alignment:
Q  38 cttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||| |||||| |||||||||||| ||| ||||||||||||| |||||| ||||    
T  46374804 cttcctaatgtatgggg-tgtacaagggtgtatgggaataaatggtgtctatgtaacatt 46374746  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 26296742 - 26296810
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgt 85  Q
    ||||||||||||||||||||| |||| ||||| || | |||||||||||||| |||  |||| |||||||    
T  26296742 tctcttttctctcctcttctctcttcttaatgtat-gaggtgtacaagggtgtatggaaatatatggtgt 26296810  T

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Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33149655 - 33149556
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||| | ||||||||| ||||| ||||||||||||||    
T  33149655 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattact 33149557  T

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Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2740357 - 2740456
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||||||||||| |||||| ||||||||||||| ||| |||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  2740357 cgcacaagcacactttctcttttctctccccttctctcttcctaatgcat-gggatgtacaagggtgtatgggaataaagggtgtctatgtatcattact 2740455  T

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Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18520901 - 18520802
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||||| |||||||||||| ||||||||||||| | |||||||||||||| |||| |||||| ||||| ||||||||||||||    
T  18520901 cgcacaagcacactttctcttttatctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcattact 18520803  T

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Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40145490 - 40145589
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||  | |||||||||||||  ||||||||||| ||||| ||||||||||||||    
T  40145490 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgca-cgaggtgtacaagggtatatgagaataaagggtgtctatgtatcattact 40145588  T

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Target: chr5; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14831897 - 14831998
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||| |||| |||||||||||| ||||||||||||| ||||||||||||| || ||| ||||||| ||||| ||||||||||||||    
T  14831897 cgcacaagcacactttcttttttttctcctcttctctcttcctaatgcat-ggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattact 14831995  T
Q  101 cgt 103  Q
    |||    
T  14831996 cgt 14831998  T

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Target: chr5; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 15409627 - 15409532
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||| || |||||||||||||||| ||| ||||||| ||||| |||||| ||||    
T  15409627 cgcacaagcacactctctcttttctctcctcttctctcttcctaatgtat-ggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacatt 15409532  T

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Target: chr5; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35785282 - 35785381
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||| |||||  ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||  |||||| ||||| ||||||||||||||    
T  35785282 cgcacaatcacactttctcttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattact 35785380  T

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Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13811735 - 13811834
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||| |||||||||||||| ||||||||||||| ||| ||||||||| || ||| ||||||||||||| ||||||| ||||||    
T  13811735 cgcacaagcacactttctcttctctctcctcttctctcttcctaatgcat-gggatgtacaaggatgtatgggaataaatggtgtctatgtat-attact 13811832  T

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Target: chr5; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36732959 - 36732876
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgt 85  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||| ||||||| |||||    
T  36732959 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgggaataaagggtgt 36732876  T

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Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26720599 - 26720678
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatg 81  Q
    |||||||||||||  |||||||||||| |||||||| |||||||||| || ||||||||| |||||| |||||||||||||    
T  26720599 cgcacaagcacactttctcttttctcttctcttctctcttcctaatgtat-ggggtgtactagggtgtatgagaataaatg 26720678  T

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Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26990348 - 26990427
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatg 81  Q
    |||||||||||||  |||||||||||| |||||||| |||||||||| || ||||||||| |||||| |||||||||||||    
T  26990348 cgcacaagcacactttctcttttctcttctcttctctcttcctaatgtat-ggggtgtactagggtgtatgagaataaatg 26990427  T

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Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 6679796 - 6679876
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||||||||||||||| |||||||||| ||  ||||||||||||||| |||| |||||||| ||| |||||| ||||    
T  6679796 tctcttttctctcctcttctctcttcctaatgtat-agggtgtacaagggtgtatgacaataaatgatgtctatgtaacatt 6679876  T

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Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31009071 - 31009166
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||| ||| |||| |||||||| ||||||| ||||| ||||||||||| |||| ||||||||||| ||||| |||||| ||||    
T  31009071 cgcacaagcacactttctatttcctcttctcttctctcttcctagtgcat-ggggtgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 31009166  T

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Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 36875629 - 36875538
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  |||||||| |||||||||||| ||||||||| ||| |||||||||||||||| |    |||||||||||| |||||| ||||    
T  36875629 cgcacaagcacactttctcttttttctcctcttctctcttcctaatacat-ggggtgtacaagggtgga----aataaatggtgtctatgtaacatt 36875538  T

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Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 33825339 - 33825258
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgt 85  Q
    |||||||||||  |||||||| ||| |||||||| ||||||| ||||| |||||||| |||| || |||||||||||||||||    
T  33825339 cacaagcacactttctcttttatcttctcttctctcttcctagtgcat-ggggtgtagaaggctgtatgagaataaatggtgt 33825258  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 35943907 - 35943814
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||  ||||||| |||||||||| || ||||||| ||||| |||||||||||||||| |||  ||||||  |||| |||||| ||||    
T  35943907 cacaagcacactttctctttcctctcctcttttctcttcctagtgcat-ggggtgtacaagggtgtatggaaataaaatgtgtctatgtaacatt 35943814  T

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Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 31132448 - 31132516
Alignment:
Q  32 ttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||| ||| |||||||||| || |||||||||||| |||| |||||| ||||| |||||||||||||||    
T  31132448 ttctctctttctaatgcatgagg-tgtacaagggtgtatgaaaataaagggtgtttatgtatcattactc 31132516  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 2177449 - 2177524
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaa 79  Q
    ||||||||||   ||||||| ||||||||||||| ||||||| |||||  || |||||||||||| |||||||||||    
T  2177449 cacaagcacattttctctttcctctcctcttctctcttcctagtgcat-tggatgtacaagggtgtatgagaataaa 2177524  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 16115296 - 16115250
Alignment:
Q  55 gtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||||||| ||| ||||||||||| ||||| |||||||||||||||    
T  16115296 gtgtacaagagtgtatgagaataaagggtgtctatgtatcattactc 16115250  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28177858 - 28177911
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggg 54  Q
    ||||||| |||||  ||||||||||||||||||| | |||||||||| ||||||    
T  28177858 cgcacaaacacactttctcttttctctcctcttccctcttcctaatgtatgggg 28177911  T

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Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31456772 - 31456871
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  31456772 cgcacaagcacactttctcttttctctcctcttttctcttcctaatgcat-ggggtgtacaagggtgcatgggaataaagggtgtttatgtatcattact 31456870  T

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Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33644283 - 33644382
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||| ||||||| ||| ||||||| ||||| ||||||||||||||    
T  33644283 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtataagggtgtatgggaataaagggtgtctatgtatcattact 33644381  T

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Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 53982094 - 53982193
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||| ||||||| ||||| ||||||||||||||    
T  53982094 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggttgtatgggaataaagggtgtctatgtatcattact 53982192  T

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Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 20764929 - 20764837
Alignment:
Q  4 acaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||||  ||||||||||||| ||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||| |||||| ||||    
T  20764929 acaagcacactttctcttttctctcatcttctctcttcctaatgtatgggg-tgtacaagggtgtatgagaataaatggtgtctatgtaacatt 20764837  T

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Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 49607499 - 49607603
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactcg 102  Q
    |||||||||||  |||||||||||||||||| || ||||||||||||||  | |||||||||||| ||| ||||||| ||||| ||||||||||||||||    
T  49607499 cacaagcacactttctcttttctctcctcttttctcttcctaatgcatgacg-tgtacaagggtgtatgggaataaagggtgtctatgtatcattactcg 49607597  T
Q  103 tcaaaa 108  Q
    | ||||    
T  49607598 taaaaa 49607603  T

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Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 17470490 - 17470587
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    |||||||||||  ||||||||||||| ||||||| ||||||||||||| ||| |||||||   || ||||||||||||||||| |||||||||||||||    
T  17470490 cacaagcacactttctcttttctctcatcttctctcttcctaatgcat-gggatgtacaaatatgtatgagaataaatggtgtctatgtatcattactc 17470587  T

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Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8076476 - 8076571
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||| ||||||||||||| ||||||| ||||| |||||||||||  ||| ||||||||||||||||| |||||| ||||    
T  8076476 cgcacaagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaaaagtgtatgagaataaatggtgtctatgtaacatt 8076571  T

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Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 54868912 - 54868813
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||| |||||  ||||||||||||| ||||||| |||||||||||||  ||||||||||||||| |||  |||||| ||||| ||||||||||||||    
T  54868912 cgcacaatcacactttctcttttctctcatcttctctcttcctaatgcat-agggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattact 54868814  T

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Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 52629386 - 52629482
Alignment:
Q  4 acaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||||||||  ||||||||||||| ||||||| ||||||||||||| ||| |||||||||||| |||  |||||  ||||| |||||||||||||||    
T  52629386 acaagcacactttctcttttctctcatcttctctcttcctaatgcat-gggatgtacaagggtgtatggaaataatgggtgtctatgtatcattactc 52629482  T

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Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 36707430 - 36707347
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||  || ||| ||||||| ||||| ||||||||||||||    
T  36707430 tctcttttctctcctcttctctcttcctaatgcat-gaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcattact 36707347  T

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Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 51419377 - 51419282
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||| ||||| |||||||||| || |||||||||||||||| |||  |||||| ||||| |||||| ||||    
T  51419377 cgcacaagcacactttctcttttctctcctattctctcttcctaatgtat-ggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacatt 51419282  T

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Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 11347934 - 11347844
Alignment:
Q  6 aagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||  ||||||||||||||||||||| |||||||||| || |||||||| ||||||| ||| ||||||| ||||| |||||| ||||    
T  11347934 aagcacactttctcttttctctcctcttctctcttcctaatgtat-ggggtgtataagggtgtatgggaataaagggtgtctatgtaccatt 11347844  T

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Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 11095356 - 11095285
Alignment:
Q  29 ctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||| || ||||||||||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||||||    
T  11095356 ctcttttctcttcctaatgcatcggg-tgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 11095285  T

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Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 30801748 - 30801655
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||||   ||||||| ||||| ||||||| ||||||| | ||||||| |||||||||||| ||||||||||| ||||| |||||| ||||    
T  30801748 cacaagcacattttctctttcctctcatcttctctcttcctagtacatgggg-tgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 30801655  T

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Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 35536711 - 35536804
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||   ||||||  ||| |||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||||||| |||||| ||||    
T  35536711 cacaagcacacttcctctttcatcttctcttctctcttcctagtgcatgggg-tgtagaagggtgtatgagaataaatggtgtctatgtaacatt 35536804  T

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Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 9563083 - 9563179
Alignment:
Q  2 gcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattac 99  Q
    |||||| |||||  ||||| ||||||||||||||| ||||||||||||| | | ||||||| |||| ||| ||||||| ||| | |||||||||||||    
T  9563083 gcacaaacacactttctctcttctctcctcttctctcttcctaatgcat-gagttgtacaaaggtgtatgggaataaagggtatctatgtatcattac 9563179  T

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Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 41189781 - 41189686
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||||||||  |||||||||| || || ||||||||| ||| |||  |||||| ||||| |||||| ||||    
T  41189781 cgcacaagcacactttctcttttctctcctcttctttcttcctaatgtat-ggagtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 41189686  T

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Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 47531948 - 47532043
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||| ||||| |||||||||| || ||  |||||||| ||| ||| ||||||| ||||| |||||| ||||    
T  47531948 cgcacaagcacactttctcttttctctcctattctctcttcctaatgtat-ggaatgtacaagtgtgtatgggaataaagggtgtttatgtaacatt 47532043  T

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Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 27714892 - 27714822
Alignment:
Q  29 ctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||| ||||| ||| ||||||| |||||||||||| | |||||||||  |||||||||||||||||||    
T  27714892 ctcttctctcttcccaatacatgggg-tgtacaagggtgtacgagaataaagagtgtatatgtatcattact 27714822  T

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Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 35965798 - 35965704
Alignment:
Q  2 gcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||||||||  ||||||| |||||||||| ||  ||| |||| |||| || |||||||||||| ||||||||||| ||||| |||||| ||||    
T  35965798 gcacaagcacactttctctttcctctcctcttttcttttcttaattcatgagg-tgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 35965704  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 26141547 - 26141452
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttc--tcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||  |||||||||||||||||||  || |||||||||| || |||||||||||| ||| |||  |||||| ||||| |||||| ||||    
T  26141547 cacaagcacactttctcttttctctcctcttctttctcttcctaatgtat-ggggtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 26141452  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 48587087 - 48587019
Alignment:
Q  32 ttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||| ||||||||||||||||  |||||||||||  ||| ||||||| ||||| |||||||||||||||    
T  48587087 ttctctcttcctaatgcatggga-tgtacaagggtatatgggaataaagggtgtctatgtatcattactc 48587019  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 14623854 - 14623761
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||  |||||||  ||| |||||||| ||| ||| |||||| || |||| |||| || ||||||||||||||||| |||||| ||||    
T  14623854 cacaagcacactttctctttcatcttctcttctctctttctagtgcatgagg-tgtagaaggatgtatgagaataaatggtgtctatgtaacatt 14623761  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 36331346 - 36331251
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||| ||||  |||||||  ||| |||||||| ||||||||| ||||||| |||||||||||| |||  | |||| | |||||||||| ||||    
T  36331346 cgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgggg-tgtacaagggtgtatgcaattaaaagatgtatatgtaacatt 36331251  T

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Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10249399 - 10249300
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  10249399 cgcacaagcacactttctcttttctctcctcttttctcttcctaatgcatgggg-tgtacaagggtgtatgagaataaagggtgtctatgtatcattact 10249301  T

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Target: chr2; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 13438426 - 13438525
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||| ||||||| ||||| ||||||||||||||    
T  13438426 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattact 13438524  T

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Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17473103 - 17473202
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  17473103 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 17473201  T

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Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28863538 - 28863647
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  |||||||| |||||||||||| ||||||||||||| | |||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  28863538 cgcacaagcacactttctcttttatctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 28863636  T
Q  101 cgtcaaaatat 111  Q
    | | |||||||    
T  28863637 cataaaaatat 28863647  T

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Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19930837 - 19930738
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  19930837 cgcacaaacacactttctcttttctctcctcttctctcttcctaatgcat-gaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcattact 19930739  T

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Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32505665 - 32505566
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||| ||||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||  |||| ||||||||||||||    
T  32505665 cgcacaagcacactttctattttctctcctcttctctcttcttaatgcatgggg-tgtacaagggtgtatgagaataaagagtgtctatgtatcattact 32505567  T

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Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9058563 - 9058663
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||| ||||||| ||| | ||| ||||||||||    
T  9058563 cgcacaagcacactttctcttttctctcctcttctctcttcctaatgcat-ggggtgtacaagagtgtatgggaataaagggtatttatatatcattact 9058661  T
Q  101 cg 102  Q
    ||    
T  9058662 cg 9058663  T

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Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 7465750 - 7465653
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    |||||||||||  |||||||| |||| ||||||| |||||||||||||| || |||||||||||| ||| ||||||| ||||| |||||||||||||||    
T  7465750 cacaagcacactttctcttttatctcttcttctctcttcctaatgcatgagg-tgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 7465653  T

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Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33436117 - 33436020
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattac 99  Q
    |||||||||||||  ||||||| ||||| ||||||| ||||||||||||| | |||||||||||||| ||||||||||| ||||| |||| ||||||||    
T  33436117 cgcacaagcacactttctctttcctctcatcttctctcttcctaatgcat-gaggtgtacaagggtgtatgagaataaaaggtgtctatgcatcattac 33436020  T

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Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28381672 - 28381573
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||||||||||||  ||||||||||||| ||||||| |||||||||  |||||| ||||||||| || ||| ||||||| ||||| ||||||||||||||    
T  28381672 cgcacaagcacactttctcttttctctcatcttctctcttcctaatatatgggg-tgtacaaggatgtatgggaataaagggtgtctatgtatcattact 28381574  T

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Target: chr2; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 38882828 - 38882729
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||||| |||  ||||||||||||  |||| || ||||||||||||||||| |||||||||||| ||| ||||||||||| | ||||||||||||||    
T  38882828 cgcacaagcgcactttctcttttctcttatcttatctcttcctaatgcatgggg-tgtacaagggtgtatgggaataaatggtctctatgtatcattact 38882730  T

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Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40701561 - 40701660
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    ||||||| |||||  ||||||||||||| ||||||| |||||||||||||  ||||||||||||||| |||  |||||| ||||| ||||||||||||||    
T  40701561 cgcacaatcacactttctcttttctctcatcttctctcttcctaatgcat-cgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattact 40701659  T

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Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4060768 - 4060867
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||| ||||||||  ||| ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||  |||||| | ||| ||||||||||||||    
T  4060768 cgcataagcacactttcttttttctctcatcttctctcttcctaatgcat-ggggtgtacaagggtgtatggaaataaaagatgtttatgtatcattact 4060866  T

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Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20700898 - 20700993
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||| ||||||||  ||||||| ||||||||||||| ||||||| ||||| |||||||||||||||| ||| ||||||| ||||| |||||| ||||    
T  20700898 cgcataagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 20700993  T

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Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 36168919 - 36169014
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||| ||  ||||||||||||||| ||||| |||||||||| || |||||||||||| ||| ||||||||||| ||||| |||||| ||||    
T  36168919 cgcacaagcatactttctcttttctctcctattctctcttcctaatgtat-ggggtgtacaagagtgtatgagaataaagggtgtttatgtaacatt 36169014  T

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Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 30915549 - 30915646
Alignment:
Q  4 acaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactcg 102  Q
    ||||||||||  ||||||||||||| ||||||| ||||||||| ||| |||||||||||||||| |||  |||||  | ||| ||||||||||||||||    
T  30915549 acaagcacactttctcttttctctcatcttctctcttcctaatacat-ggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactcg 30915646  T

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Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2533206 - 2533293
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatat 89  Q
    |||||||||||||  | |||||| |||||||||||| ||||| |||| || |||||||||||||||| ||| ||||||| |||||||||    
T  2533206 cgcacaagcacactttttcttttatctcctcttctctcttcccaatgtat-ggggtgtacaagggtgtatgggaataaagggtgtatat 2533293  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 40613919 - 40613824
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||||||||||| ||||  |||| ||||| |||||| |||||||||||| ||| ||||||| ||||| |||||| ||||    
T  40613919 cgcacaagcacactttctcttttctctcctattctttcttcataatgtatgggg-tgtacaagggtgtatgggaataaagggtgtctatgtaacatt 40613824  T

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Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38273159 - 38273070
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgta 92  Q
    ||||| |||||||  ||||||||||||||| ||||| |||||||||| || ||||||||||| | || ||||||||||||||||| ||||||    
T  38273159 cgcactagcacactttctcttttctctcctattctctcttcctaatgtat-ggggtgtacaa-gatgtatgagaataaatggtgtttatgta 38273070  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 5574489 - 5574418
Alignment:
Q  29 ctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||| || ||||||||||||||| | |||||||||||| ||| ||||||| ||||| |||||||||||||||    
T  5574489 ctcttttctcttcctaatgcatggcg-tgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 5574418  T

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Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 42257276 - 42257366
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgta 92  Q
    |||||||||||||  ||||||||||||||||||||  |||||||||| || |||||||||||| ||| ||   |||||| ||||| ||||||    
T  42257276 cgcacaagcacactttctcttttctctcctcttctttcttcctaatgtat-ggggtgtacaagagtgtatagaaataaagggtgtctatgta 42257366  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 44152012 - 44152105
Alignment:
Q  3 cacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||  |||||||  |||||||||||| ||||||||||||| | | | |||||||||| ||| ||||||| ||||| |||||| ||||    
T  44152012 cacaagcacactttctctttcatctcctcttctctcttcctaatgcat-gagatatacaagggtgtatgcgaataaaaggtgtttatgtaacatt 44152105  T

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Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 41758685 - 41758765
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||| |||||||||||| |||||||||  || ||||||||||||| || |||||||||||  |||| |||||| ||||    
T  41758685 tctcttttatctcctcttctctcttcctaatatat-ggggtgtacaaggatgtatgagaataaaatgtgtctatgtaacatt 41758765  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 27864811 - 27864873
Alignment:
Q  38 cttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||||||| ||||||  |||||||||||| ||||||||||| |||||  ||||||||||||||    
T  27864811 cttcctaatacatggga-tgtacaagggtgtatgagaataaagggtgtcaatgtatcattactc 27864873  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 44728659 - 44728705
Alignment:
Q  139 aagagatagatagagagaaaatatggtgtagaatgagtgtatgaaaa 185  Q
    |||||| |||||||| ||||||| ||||| |||||||||||||||||    
T  44728659 aagagagagatagagcgaaaataaggtgttgaatgagtgtatgaaaa 44728705  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13365436 - 13365531
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||| ||||  |||||||  ||| |||||||| ||||||||| ||||||| |||||||||||| |||  | |||| ||||| |||||| ||||    
T  13365436 cgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgggg-tgtacaagggtgaatgcaattaaaaggtgtctatgtaacatt 13365531  T

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Target: scaffold0237 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4112 - 4211
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattact 100  Q
    |||| ||||||||  |||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||    
T  4112 cgcataagcacactttctcttttctcttctcttctctcttcctaatgcatgggg-tgtacaagggtgtatgggaataaatggtgtctatgtatcattact 4210  T

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Target: scaffold0321 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 10123 - 10027
Alignment:
Q  4 acaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcattactc 101  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||||  ||||||||||||||| |||  |||||  ||||| |||||||||||||||    
T  10123 acaagcacactttctcttttctctcctcttctctcttcctaatgcat-agggtgtacaagggtgtatggaaataatgggtgtctatgtatcattactc 10027  T

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Target: scaffold1268 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 946 - 851
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||| ||||||||||||| ||||||| ||||| |||||||||||| ||| ||| ||||||| ||||| |||||| ||||    
T  946 cgcacaagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

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Target: scaffold1267 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 946 - 851
Alignment:
Q  1 cgcacaagcacacagtctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    |||||||||||||  ||||||| ||||||||||||| ||||||| ||||| |||||||||||| ||| ||| ||||||| ||||| |||||| ||||    
T  946 cgcacaagcacactttctctttcctctcctcttctctcttcctagtgcat-ggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 8865 - 8785
Alignment:
Q  16 tctcttttctctcctcttctcccttcctaatgcatgggggtgtacaagggtgcatgagaataaatggtgtatatgtatcatt 97  Q
    ||||||| ||| | ||||||| |||||||||  |||||| |||||||||||| || |||||||| ||||| |||||| ||||    
T  8865 tctctttcctcccatcttctctcttcctaatatatgggg-tgtacaagggtgtataagaataaaaggtgtctatgtaacatt 8785  T

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