View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8324_1D_low_12 (Length: 288)
Name: NF8324_1D_low_12
Description: NF8324_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8324_1D_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 35621833 - 35621587
Alignment:
| Q |
20 |
atcaacaaaaaggacttgacccacataaagaaaatgaactatgaaaataaagttataacctttacatgctcaaaagactctaaacacaattcaatccatg |
119 |
Q |
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| T |
35621833 |
atcaacaaaaaggacttgacccacataaagaaaatgaactatgaaaataaagttataacctttacatgctcaaaagactctaaacacaattcaatccatg |
35621734 |
T |
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| Q |
120 |
cccacttcataaaattatgcaaaaatggaacacagcagaacaattcaagcgaagaagaatataaattgaaatagagggtaactaacctgaagagaatgcg |
219 |
Q |
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| T |
35621733 |
cccacttcataaaattatgcaaaaatggaacacagcagaacaattcaagcgaagaagaatataaattgaaatggagggtaactaacctgaagagaatgcg |
35621634 |
T |
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| Q |
220 |
aaagtggagtgaagagtgaaatggatttgactaacatgtgggttctg |
266 |
Q |
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| T |
35621633 |
aaaatggagtgaagagtgaaatggatttgactaacatgtgggttctg |
35621587 |
T |
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