View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8324_1D_low_14 (Length: 283)

Name: NF8324_1D_low_14
Description: NF8324_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8324_1D_low_14
NF8324_1D_low_14
[»] chr5 (41 HSPs)
chr5 (1-102)||(38274819-38274920)
chr5 (169-267)||(31162461-31162559)
chr5 (169-265)||(21949440-21949536)
chr5 (169-267)||(5747143-5747241)
chr5 (169-267)||(6543455-6543553)
chr5 (169-267)||(28641543-28641641)
chr5 (174-265)||(3878818-3878909)
chr5 (169-253)||(3191838-3191922)
chr5 (174-265)||(31093041-31093132)
chr5 (169-265)||(39402598-39402694)
chr5 (169-228)||(39402252-39402311)
chr5 (172-252)||(119054-119134)
chr5 (172-252)||(119924-120004)
chr5 (172-252)||(19352343-19352423)
chr5 (170-219)||(21949830-21949879)
chr5 (169-228)||(3192221-3192280)
chr5 (172-243)||(14626064-14626135)
chr5 (170-253)||(30351669-30351752)
chr5 (169-219)||(6543845-6543895)
chr5 (173-259)||(14625166-14625252)
chr5 (169-219)||(28641201-28641251)
chr5 (172-240)||(19353216-19353284)
chr5 (172-228)||(31093417-31093473)
chr5 (170-216)||(119226-119272)
chr5 (169-219)||(5746801-5746851)
chr5 (170-220)||(19353067-19353117)
chr5 (169-219)||(31162851-31162901)
chr5 (170-227)||(4186796-4186853)
chr5 (170-219)||(19352513-19352562)
chr5 (169-228)||(3879194-3879253)
chr5 (170-216)||(119786-119832)
chr5 (172-229)||(718213-718270)
chr5 (170-217)||(87262-87309)
chr5 (172-211)||(3406692-3406731)
chr5 (173-218)||(30350646-30350691)
chr5 (170-217)||(31588347-31588394)
chr5 (170-220)||(37813417-37813467)
chr5 (172-217)||(4187837-4187882)
chr5 (170-207)||(18340661-18340698)
chr5 (173-206)||(38834790-38834823)
chr5 (174-210)||(8647358-8647394)
[»] chr6 (25 HSPs)
chr6 (169-267)||(20824204-20824302)
chr6 (169-267)||(14257187-14257285)
chr6 (169-265)||(15147758-15147854)
chr6 (169-265)||(6162285-6162381)
chr6 (174-265)||(33106975-33107066)
chr6 (169-265)||(20228188-20228284)
chr6 (169-265)||(22122172-22122268)
chr6 (169-221)||(14257575-14257627)
chr6 (169-228)||(6162678-6162737)
chr6 (169-228)||(33107351-33107410)
chr6 (169-219)||(20824594-20824644)
chr6 (172-221)||(15148146-15148195)
chr6 (170-222)||(20522152-20522204)
chr6 (169-228)||(34984535-34984593)
chr6 (170-227)||(20521227-20521284)
chr6 (170-217)||(5974053-5974100)
chr6 (170-217)||(19595650-19595697)
chr6 (170-217)||(8710341-8710388)
chr6 (172-211)||(14712874-14712913)
chr6 (170-217)||(19579203-19579250)
chr6 (170-208)||(4510230-4510268)
chr6 (170-260)||(7645940-7646030)
chr6 (169-227)||(20227097-20227155)
chr6 (169-227)||(22121081-22121139)
chr6 (170-206)||(21113071-21113107)
[»] chr4 (51 HSPs)
chr4 (169-267)||(28957693-28957791)
chr4 (169-267)||(38026058-38026156)
chr4 (169-267)||(31228261-31228359)
chr4 (169-267)||(55347601-55347699)
chr4 (169-265)||(2669391-2669487)
chr4 (170-265)||(40841503-40841598)
chr4 (174-265)||(12923026-12923117)
chr4 (174-265)||(43979603-43979694)
chr4 (174-265)||(46263019-46263110)
chr4 (174-265)||(790279-790370)
chr4 (169-266)||(12108241-12108338)
chr4 (169-253)||(28505249-28505333)
chr4 (174-265)||(30545759-30545851)
chr4 (174-265)||(1317106-1317197)
chr4 (172-267)||(21235071-21235166)
chr4 (172-253)||(47053805-47053886)
chr4 (169-221)||(2669047-2669099)
chr4 (169-228)||(12922682-12922741)
chr4 (170-219)||(40841892-40841941)
chr4 (172-228)||(21235451-21235507)
chr4 (169-228)||(43979979-43980038)
chr4 (170-217)||(55347970-55348017)
chr4 (169-219)||(28957351-28957401)
chr4 (169-219)||(31227919-31227969)
chr4 (172-217)||(17288374-17288419)
chr4 (172-252)||(47058473-47058553)
chr4 (170-228)||(54167536-54167594)
chr4 (172-228)||(789938-789994)
chr4 (174-222)||(28505637-28505685)
chr4 (169-228)||(30546136-30546195)
chr4 (170-217)||(54142367-54142414)
chr4 (170-217)||(54143502-54143549)
chr4 (172-216)||(1317494-1317538)
chr4 (169-221)||(38025716-38025768)
chr4 (172-228)||(46262678-46262734)
chr4 (170-218)||(54168823-54168871)
chr4 (170-217)||(3296945-3296992)
chr4 (170-217)||(29691567-29691614)
chr4 (172-210)||(10580084-10580122)
chr4 (172-217)||(17287531-17287576)
chr4 (172-217)||(49424498-49424543)
chr4 (172-217)||(49426353-49426398)
chr4 (169-217)||(12107746-12107794)
chr4 (170-217)||(3296585-3296632)
chr4 (172-211)||(29691746-29691785)
chr4 (170-217)||(30953002-30953049)
chr4 (170-217)||(34129301-34129348)
chr4 (170-217)||(51906820-51906867)
chr4 (172-204)||(1791389-1791421)
chr4 (170-206)||(7118176-7118212)
chr4 (172-208)||(26168209-26168245)
[»] chr3 (43 HSPs)
chr3 (169-267)||(46689722-46689820)
chr3 (169-265)||(42606320-42606416)
chr3 (170-265)||(45539593-45539688)
chr3 (169-267)||(36899294-36899392)
chr3 (169-265)||(2388672-2388768)
chr3 (174-265)||(22406888-22406979)
chr3 (174-265)||(27475682-27475773)
chr3 (174-265)||(34950140-34950231)
chr3 (169-253)||(4199493-4199577)
chr3 (172-260)||(35300788-35300876)
chr3 (169-228)||(4199876-4199935)
chr3 (172-253)||(20826772-20826853)
chr3 (170-219)||(45539250-45539299)
chr3 (169-221)||(2389060-2389112)
chr3 (172-252)||(20831067-20831147)
chr3 (169-221)||(36899682-36899734)
chr3 (169-221)||(42606708-42606760)
chr3 (169-228)||(34949796-34949855)
chr3 (169-219)||(46690112-46690162)
chr3 (172-217)||(48868588-48868633)
chr3 (172-228)||(22407264-22407320)
chr3 (169-214)||(27475430-27475475)
chr3 (170-222)||(54588499-54588551)
chr3 (172-217)||(48867694-48867739)
chr3 (172-239)||(7248468-7248535)
chr3 (170-217)||(9217862-9217909)
chr3 (170-217)||(51755915-51755962)
chr3 (170-227)||(54589566-54589624)
chr3 (172-217)||(3799766-3799811)
chr3 (172-217)||(33225532-33225577)
chr3 (184-253)||(35301858-35301927)
chr3 (172-217)||(47343726-47343771)
chr3 (170-218)||(51587571-51587619)
chr3 (170-217)||(22814338-22814385)
chr3 (170-217)||(25770363-25770410)
chr3 (172-211)||(25770538-25770577)
chr3 (170-217)||(43933482-43933529)
chr3 (170-217)||(44504134-44504181)
chr3 (170-217)||(44504387-44504434)
chr3 (170-208)||(132069-132107)
chr3 (170-208)||(37172123-37172161)
chr3 (170-207)||(9218524-9218561)
chr3 (172-217)||(47342790-47342835)
[»] chr2 (51 HSPs)
chr2 (169-267)||(1804614-1804712)
chr2 (169-267)||(6476127-6476225)
chr2 (169-267)||(11451138-11451236)
chr2 (169-267)||(27377689-27377787)
chr2 (174-265)||(3854112-3854203)
chr2 (181-265)||(12089747-12089831)
chr2 (174-265)||(22701558-22701649)
chr2 (181-265)||(26525514-26525598)
chr2 (181-265)||(34038205-34038289)
chr2 (169-253)||(39096922-39097006)
chr2 (174-265)||(38110361-38110449)
chr2 (169-219)||(1804272-1804322)
chr2 (169-219)||(6476517-6476567)
chr2 (172-249)||(10708067-10708144)
chr2 (172-253)||(44934648-44934729)
chr2 (170-238)||(18105758-18105826)
chr2 (169-228)||(3854488-3854547)
chr2 (169-228)||(12090116-12090175)
chr2 (169-228)||(34037849-34037908)
chr2 (170-220)||(10709517-10709567)
chr2 (172-252)||(44930027-44930107)
chr2 (169-228)||(39096564-39096623)
chr2 (169-219)||(11450796-11450846)
chr2 (170-260)||(18107383-18107473)
chr2 (169-219)||(27378079-27378129)
chr2 (170-227)||(23221876-23221933)
chr2 (172-228)||(26525885-26525941)
chr2 (172-220)||(39947084-39947132)
chr2 (170-217)||(2035650-2035697)
chr2 (170-217)||(2036604-2036651)
chr2 (172-229)||(39945886-39945943)
chr2 (170-206)||(3624925-3624961)
chr2 (170-217)||(2517455-2517502)
chr2 (170-217)||(21216965-21217012)
chr2 (170-217)||(21217322-21217369)
chr2 (170-217)||(21265033-21265080)
chr2 (170-217)||(21265390-21265437)
chr2 (179-218)||(22701945-22701984)
chr2 (170-220)||(10710828-10710878)
chr2 (172-242)||(10710978-10711048)
chr2 (170-208)||(24093198-24093236)
chr2 (170-207)||(3691400-3691437)
chr2 (170-217)||(2191259-2191306)
chr2 (170-217)||(3691125-3691172)
chr2 (170-217)||(7083564-7083611)
chr2 (170-217)||(21267369-21267416)
chr2 (172-211)||(24093373-24093412)
chr2 (172-211)||(32861047-32861086)
chr2 (172-217)||(23222864-23222909)
chr2 (169-221)||(38110025-38110078)
chr2 (170-206)||(21182349-21182385)
[»] chr1 (35 HSPs)
chr1 (169-267)||(40124116-40124214)
chr1 (169-267)||(32266523-32266621)
chr1 (169-265)||(47410807-47410903)
chr1 (169-265)||(46802362-46802458)
chr1 (174-267)||(30427719-30427812)
chr1 (169-265)||(9122725-9122821)
chr1 (174-265)||(45230175-45230266)
chr1 (181-267)||(17968419-17968505)
chr1 (169-221)||(47410463-47410515)
chr1 (169-220)||(8997381-8997432)
chr1 (189-260)||(8998193-8998264)
chr1 (169-221)||(9123113-9123165)
chr1 (169-228)||(17968077-17968136)
chr1 (169-219)||(32266913-32266963)
chr1 (169-219)||(40124506-40124556)
chr1 (170-219)||(1500980-1501029)
chr1 (172-221)||(46802750-46802799)
chr1 (170-253)||(12868475-12868558)
chr1 (169-228)||(30428095-30428154)
chr1 (169-228)||(45230551-45230610)
chr1 (170-242)||(12869631-12869702)
chr1 (170-218)||(36793574-36793622)
chr1 (170-219)||(1500101-1500150)
chr1 (170-227)||(45664729-45664786)
chr1 (172-211)||(3591171-3591210)
chr1 (170-217)||(5172787-5172834)
chr1 (175-213)||(31889481-31889519)
chr1 (170-228)||(36792282-36792339)
chr1 (172-239)||(45665920-45665987)
chr1 (170-217)||(47541560-47541607)
chr1 (170-208)||(5683571-5683609)
chr1 (172-217)||(5683205-5683250)
chr1 (172-217)||(37717797-37717842)
chr1 (170-207)||(50359167-50359204)
chr1 (183-211)||(19895628-19895656)
[»] scaffold0085 (2 HSPs)
scaffold0085 (169-267)||(39803-39901)
scaffold0085 (169-219)||(39461-39511)
[»] chr7 (31 HSPs)
chr7 (169-265)||(33847906-33848002)
chr7 (174-265)||(884728-884819)
chr7 (174-265)||(1244057-1244148)
chr7 (174-265)||(28898413-28898504)
chr7 (169-265)||(29784332-29784428)
chr7 (174-265)||(41298290-41298381)
chr7 (169-253)||(18443216-18443300)
chr7 (169-228)||(18443599-18443658)
chr7 (169-221)||(22954086-22954138)
chr7 (169-228)||(1244433-1244492)
chr7 (169-228)||(28898069-28898128)
chr7 (169-228)||(41298666-41298725)
chr7 (170-219)||(33848296-33848345)
chr7 (169-228)||(29783975-29784034)
chr7 (170-219)||(27310089-27310138)
chr7 (170-219)||(30939563-30939612)
chr7 (170-218)||(27311048-27311096)
chr7 (170-217)||(17075618-17075665)
chr7 (170-219)||(4152762-4152811)
chr7 (170-217)||(17075261-17075308)
chr7 (172-211)||(20544145-20544184)
chr7 (170-217)||(22948879-22948926)
chr7 (170-217)||(32092270-32092317)
chr7 (170-217)||(42750119-42750166)
chr7 (170-208)||(20543953-20543991)
chr7 (170-207)||(20544321-20544358)
chr7 (172-217)||(28852737-28852782)
chr7 (176-217)||(32092530-32092571)
chr7 (172-208)||(10466659-10466695)
chr7 (170-218)||(30938637-30938685)
chr7 (170-206)||(44803644-44803680)
[»] chr8 (29 HSPs)
chr8 (181-265)||(12734557-12734641)
chr8 (169-253)||(29917503-29917587)
chr8 (181-252)||(4624413-4624484)
chr8 (169-228)||(29917145-29917204)
chr8 (169-228)||(12734213-12734272)
chr8 (169-222)||(24846003-24846056)
chr8 (170-227)||(26720363-26720420)
chr8 (172-241)||(36155315-36155384)
chr8 (170-218)||(4624575-4624623)
chr8 (172-216)||(4694434-4694478)
chr8 (169-217)||(22601539-22601587)
chr8 (170-242)||(44148619-44148691)
chr8 (172-211)||(21005956-21005995)
chr8 (170-207)||(13315244-13315281)
chr8 (170-206)||(16662210-16662246)
chr8 (170-217)||(6297504-6297551)
chr8 (170-217)||(6297863-6297910)
chr8 (170-217)||(6298036-6298083)
chr8 (170-217)||(9800344-9800391)
chr8 (170-217)||(17914239-17914286)
chr8 (172-211)||(44024442-44024481)
chr8 (181-211)||(6297688-6297718)
chr8 (170-208)||(12489270-12489308)
chr8 (170-228)||(20682914-20682972)
chr8 (183-217)||(36156359-36156393)
chr8 (170-207)||(20682750-20682787)
chr8 (172-217)||(21006123-21006168)
chr8 (170-206)||(16662483-16662519)
chr8 (170-218)||(16682573-16682621)
[»] scaffold0148 (2 HSPs)
scaffold0148 (172-253)||(29318-29399)
scaffold0148 (172-252)||(32960-33040)
[»] scaffold0009 (2 HSPs)
scaffold0009 (170-260)||(107764-107854)
scaffold0009 (172-207)||(107939-107974)


Alignment Details
Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38274920 - 38274819
Alignment:
Q  1 ccaattatcattgctatgaatactctcatctaactaaacgtataaattatgtctcaggttgtagaattccataaaaacaacatataaatgtatcataaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38274920 ccaattatcattgctatgaatactctcatctaactaaacgtataaattatgtctcaggttgtagaattccataaaaacaacatataaatgtatcataaac 38274821  T
Q  101 ta 102  Q
    ||    
T  38274820 ta 38274819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 31162461 - 31162559
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31162461 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 31162559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 21949440 - 21949536
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21949440 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 21949536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 5747241 - 5747143
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  5747241 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttatcaaatttctaacgtgatgtc 5747143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 6543455 - 6543553
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  6543455 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccttgttgtcaaatttctaacgtgatgtc 6543553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 28641641 - 28641543
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  28641641 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaatgtgatgtc 28641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 3878818 - 3878909
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  3878818 tagtccttacatttcaataaatgtttttaaaatccctatatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 3878909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 3191838 - 3191922
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  3191838 gagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgctgtcaaatt 3191922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 31093041 - 31093132
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  31093041 tagtccttacatttcaatagatgtttttaaaatccctacatttttcttgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 31093132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 39402694 - 39402598
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||| |||||    
T  39402694 gagaatagtccttacatttcaataaatatttttaaaatccctacatttttcctccggtagcgtaaatagtccctgctgtcaaattactaacttgatg 39402598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 39402252 - 39402311
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39402252 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttag 39402311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 119054 - 119134
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaat 252  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||  |||||||| ||| ||||||||    
T  119054 aatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgatagcacaaatagtctctgctgtcaaat 119134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 120004 - 119924
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaat 252  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||| ||| ||||||||    
T  120004 aatagtccttacatttcaataaatgtttttaaaatccttacatttttcctccgttagcacaaatagtctctgctgtcaaat 119924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 19352343 - 19352423
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaat 252  Q
    |||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||  |||||||||||| ||||||||    
T  19352343 aatagtccttacatttcaataaatgtttttaaaattcttacatttttcctccgttagcacaaatagtccctgctgtcaaat 19352423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 21949879 - 21949830
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21949879 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 21949830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 3192280 - 3192221
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  3192280 gagaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccgttag 3192221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 14626135 - 14626064
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctg 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || |||| | ||||| |||||||    
T  14626135 aatagtccctacatttcaataaatgtttttaaaatccctacattttttatctgttatcataaatggtccctg 14626064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 30351752 - 30351669
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||  |  |||||| ||||||||||||| ||| |||||    
T  30351752 agaatagtccctacatttcaataaatatttttaaaattcctacatttttattttgttagcataaatagtccctgctgttaaatt 30351669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 6543895 - 6543845
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6543895 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 6543845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 259
Target Start/End: Original strand, 14625166 - 14625252
Alignment:
Q  173 atagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaac 259  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||||| |||| | ||||||||| | | |||||| ||||||||    
T  14625166 atagtccataaattttaataaatgtttttaaaatccctacatttttcctccgttatcataaatagtctccggtgtcaattttctaac 14625252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 28641201 - 28641251
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28641201 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 28641251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 19353284 - 19353216
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtcc 240  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||||  |||||||||    
T  19353284 aatagtccttacatttcaataaacgtttttaaaatccatacatttttcctccgttagcacaaatagtcc 19353216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 31093473 - 31093417
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  31093473 aatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 31093417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 119226 - 119272
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacattt 216  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  119226 agaatagtccttacatttcaataaatgtttttaaaatccctacattt 119272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 5746801 - 5746851
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  5746801 gagaataatccctacatttcaataaatgttttaaaaatccctacatttttc 5746851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 19353117 - 19353067
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcc 220  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  19353117 agaatagtcctcacatttcaataaatgtttttaaaatccctacatttttcc 19353067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 31162901 - 31162851
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  31162901 gagaataatccttacatttcaataaatgtttttaaaatccctacatttttc 31162851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 4186796 - 4186853
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagtta 227  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  4186796 agaatagtacctacatttcaataaatgtttttaatatccctacatttttgctccgtta 4186853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 19352513 - 19352562
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||    
T  19352513 agaatagtccttgcatttcaataaatgtttttaaaatccctacatttttc 19352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 3879253 - 3879194
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||| |||||    
T  3879253 gagaataatccctacatttcaatgaatgtttttaaaatccctatattttttctccgttag 3879194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 119832 - 119786
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacattt 216  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||    
T  119832 agaatagtccttgcatttcaataaatgtttttaaaatccctacattt 119786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 718270 - 718213
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagc 229  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  718270 aatagttcttacatttcaataaatgtttttaaaatccctgcatttttgctccgttagc 718213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 87309 - 87262
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  87309 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 87262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 3406731 - 3406692
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  3406731 aatagtccttacatttcaataaatgtttttaaaatcccta 3406692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 30350646 - 30350691
Alignment:
Q  173 atagtccctacatttcaataaatgtttttaaaatccctacattttt 218  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||    
T  30350646 atagtccctacatttcaataaatatttttaaaattcctatattttt 30350691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 31588394 - 31588347
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||| ||||||||||||  |||||||    
T  31588394 agaatagtccctacatttcattaaatatttttaaaatcctaacatttt 31588347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 37813417 - 37813467
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcc 220  Q
    |||||||||| ||||||||| ||| |||||||||||| |||| ||||||||    
T  37813417 agaatagtccatacatttcattaagtgtttttaaaattcctaaatttttcc 37813467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 4187882 - 4187837
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||| ||||||||||||||| ||||||||||||  |||||||    
T  4187882 aatagtccttacatttcaataaatatttttaaaatcctcacatttt 4187837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 18340698 - 18340661
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatc 207  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  18340698 agaatagtccttacatttcattaaatgtttttaaaatc 18340661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 38834823 - 38834790
Alignment:
Q  173 atagtccctacatttcaataaatgtttttaaaat 206  Q
    ||||||||||||||||| ||||||||||||||||    
T  38834823 atagtccctacatttcattaaatgtttttaaaat 38834790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 8647394 - 8647358
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccct 210  Q
    |||||| | ||||||||||||||||||||||||||||    
T  8647394 tagtccttgcatttcaataaatgtttttaaaatccct 8647358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 20824204 - 20824302
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20824204 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 20824302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 14257187 - 14257285
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14257187 gagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 14257285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 15147758 - 15147854
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15147758 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 15147854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 6162285 - 6162381
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  6162285 gagaatagtcattacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccatgttgtcaaatttctaacgtgatg 6162381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 33106975 - 33107066
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  33106975 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 33107066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 20228284 - 20228188
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  20228284 gagaatagttcctacattttaataaatgtttttaaaatccctacatttttcctctgttagcgtaaatagtccctgctgtcaaatttctaacgggatg 20228188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 22122268 - 22122172
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  22122268 gagaatagttcctacattttaataaatgtttttaaaatccctacatttttcctctgttagcgtaaatagtccctgctgtcaaatttctaacgggatg 22122172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 14257627 - 14257575
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14257627 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 14257575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 6162737 - 6162678
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  6162737 gagaatagtctctacatttcaataaatgtttttaaaatccctacattttttctccgttag 6162678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 33107410 - 33107351
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  33107410 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 33107351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 20824644 - 20824594
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20824644 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 20824594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 15148195 - 15148146
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15148195 aatagtccctacatttcaataaatgattttaaaatccctacatttttcct 15148146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 20522204 - 20522152
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 222  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  20522204 agaatagtccctacatttcaataaatgtttttaaaatcactacattttacctc 20522152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 34984593 - 34984535
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||    
T  34984593 gagaatagtccctacatttcaataaatgtttttaaaat-cctacattttttctccgttag 34984535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 20521227 - 20521284
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagtta 227  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| |||||||| ||||    
T  20521227 agaatagtccctatatttcaaaaaatgtttttaaaatccctacaattttcctccgtta 20521284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 5974053 - 5974100
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  5974053 agaatagtccctacatttcattaaatgtttttaaaatccccacatttt 5974100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 19595697 - 19595650
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  19595697 agaatagtccctacatttcaataaatatttttaaaatccctatatttt 19595650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 8710388 - 8710341
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  8710388 agaatagtccttacatttcattaaatgtttttaaaatccccacatttt 8710341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 14712874 - 14712913
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  14712874 aatagtccttacatttcaataaatgtttttaaaatcccta 14712913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 19579250 - 19579203
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||||| || ||||||||||||||||||||||||||||| |||||    
T  19579250 agaatagtctctgcatttcaataaatgtttttaaaatccctatatttt 19579203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 4510230 - 4510268
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatcc 208  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  4510230 agaatagtccctacatttcattaaatgtttttaaaatcc 4510268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 7646030 - 7645940
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacg 260  Q
    |||||||||| |||||||||||||||||||| ||||| |  |||||||  ||| |||| |  || ||||||||| ||| || |||||||||    
T  7646030 agaatagtccttacatttcaataaatgttttaaaaattctcacattttatctccgttatcaaaattagtccctgctgttaattttctaacg 7645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 20227097 - 20227155
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagtta 227  Q
    ||||||||| |||| |||||||||||| |||||||||| |||| |||||| ||| ||||    
T  20227097 gagaatagttcctatatttcaataaatatttttaaaattcctatattttttctccgtta 20227155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 22121081 - 22121139
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagtta 227  Q
    ||||||||| |||| |||||||||||| |||||||||| |||| |||||| ||| ||||    
T  22121081 gagaatagttcctatatttcaataaatatttttaaaattcctatattttttctccgtta 22121139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 21113071 - 21113107
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaat 206  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  21113071 agaatagtctctacatttcattaaatgtttttaaaat 21113107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 28957791 - 28957693
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28957791 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 28957693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 38026156 - 38026058
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38026156 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 38026058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 31228359 - 31228261
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31228359 gagaatagttcctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 31228261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 55347601 - 55347699
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  55347601 gagaatagtccctacattttaataaatgtttttaaaatccctacatttttcctccattagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 55347699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 2669487 - 2669391
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  2669487 gagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagcgtaaatagtccatgttgtcaaatttctaacgtgatg 2669391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 40841503 - 40841598
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  40841503 agaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagcgtaaatagtccctgttgtcaagtttctaacgtgatg 40841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 12923117 - 12923026
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  12923117 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 12923026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 43979603 - 43979694
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  43979603 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 43979694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 46263110 - 46263019
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  46263110 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 46263019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 790370 - 790279
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  790370 tagtccttacatttcaataaatgtttttaaaattcctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 790279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 12108338 - 12108241
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgt 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| || |||||||||||||||| |||||    
T  12108338 gagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctctgttagtgtaaatagtccttgctgtcaaatttctaacgggatgt 12108241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 28505249 - 28505333
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  28505249 gagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgctgtcaaatt 28505333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 30545759 - 30545851
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcc-tcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  30545759 tagtccttacatttcaataaatgtttttaaaatccctacatttttccttgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 30545851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 1317106 - 1317197
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||||||||||||||||    
T  1317106 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccatattgtcaaatttctaacgtgatg 1317197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 21235071 - 21235166
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||| ||||| |||||||    
T  21235071 aatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaagtagtctctgctgtcaaattactaacttgatgtc 21235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 47053805 - 47053886
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||  ||||||||||||  ||||||||    
T  47053805 aatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgttagcacaaatagtccctgccgtcaaatt 47053886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 2669047 - 2669099
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2669047 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 2669099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 12922682 - 12922741
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  12922682 gagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttag 12922741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 40841941 - 40841892
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40841941 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 40841892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 21235507 - 21235451
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  21235507 aatagtccctacatttcaataaatgtttttaaaatctctacatttttcctccgttag 21235451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 43980038 - 43979979
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  43980038 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 43979979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 55348017 - 55347970
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55348017 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 55347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 28957351 - 28957401
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28957351 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 28957401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 31227919 - 31227969
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31227919 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 31227969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 17288419 - 17288374
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17288419 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 17288374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 47058553 - 47058473
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaat 252  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||  || ||||||  ||||||||||||  |||||||    
T  47058553 aatagtctttacatttcaataaatgtttttaaaatccctacattttttatccgttagcacaaatagtccctgccgtcaaat 47058473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 54167536 - 54167594
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||||    
T  54167536 agaatagtccttatatttcaataaatgtttttaaaatccctacatttttactccgttag 54167594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 789938 - 789994
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  789938 aatagtccatacatttcaatgaatgtttttaaaatccctacattttttctccgttag 789994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 28505685 - 28505637
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 222  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  28505685 tagtccctacattttaataaatgtttttaaaatccctatatttttcctc 28505637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 30546195 - 30546136
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||||| ||| |||||    
T  30546195 gagaatagtctctacatttcaatgaatatttttaaaatccctacattttttctccgttag 30546136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 54142367 - 54142414
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  54142367 agaatagtccatacatttcaataaatgtttttaaaatccttacatttt 54142414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 54143549 - 54143502
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  54143549 agaatagtccctacattttaataaatgtttttaaaatccttacatttt 54143502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 1317538 - 1317494
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacattt 216  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  1317538 aatagtccctacatttcaatgaatgtttttaaaattcctacattt 1317494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 38025716 - 38025768
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  38025716 gagaatagtccttacatttcaataaaaaattttaaaatccctacatttttcct 38025768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 46262678 - 46262734
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||| ||| |||||    
T  46262678 aatagtccctacatttcaatgaatgtttttaaaatttctacattttttctccgttag 46262734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 54168871 - 54168823
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacattttt 218  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  54168871 agaataatccctacattttaataaatatttttaaaatccctacattttt 54168823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 3296992 - 3296945
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  3296992 agaatagtccctacgtttcattaaatgtttttaaaatccttacatttt 3296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 29691567 - 29691614
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  29691567 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 29691614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 10580084 - 10580122
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccct 210  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  10580084 aatagtccttacatttcaataaatgtttttaaaatccct 10580122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 17287531 - 17287576
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||    
T  17287531 aatagtccttacatttcaataaatatttttaaaattcctacatttt 17287576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 49424498 - 49424543
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||  ||||| |||||||||||||||||||||||||||||||    
T  49424498 aatagtctttacatatcaataaatgtttttaaaatccctacatttt 49424543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 49426398 - 49426353
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||    
T  49426398 aatagtccttacatttcaataaatatttttaaaatccttacatttt 49426353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 12107746 - 12107794
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||| | ||||||||| ||||||||||| |||||||||||||||||    
T  12107746 gagaataatacctacattttaataaatgtttctaaaatccctacatttt 12107794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 3296585 - 3296632
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  3296585 agaatattccctacatttcattaaatgtttttaaaatcctcacatttt 3296632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 29691785 - 29691746
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  29691785 aatagtctttacatttcaataaatgtttttaaaatcccta 29691746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 30953049 - 30953002
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||| |||||||||||||| ||||||||||||||||||  |||||||    
T  30953049 agaatggtccctacatttcattaaatgtttttaaaatcctaacatttt 30953002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 34129348 - 34129301
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||| ||||||||||||  |||||||    
T  34129348 agaatagtccctacatttcattaaatatttttaaaatcctcacatttt 34129301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 51906867 - 51906820
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||| ||| ||||||||||||||||||  |||||||    
T  51906867 agaatagtccctacatctcattaaatgtttttaaaatcctcacatttt 51906820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 1791421 - 1791389
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaa 204  Q
    |||||||| ||||||||||||||||||||||||    
T  1791421 aatagtccttacatttcaataaatgtttttaaa 1791389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 7118212 - 7118176
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaat 206  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  7118212 agaatagtccatacatttcattaaatgtttttaaaat 7118176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 26168209 - 26168245
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcc 208  Q
    |||||||| | ||||||||||||||||||||||||||    
T  26168209 aatagtccttgcatttcaataaatgtttttaaaatcc 26168245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 46689722 - 46689820
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46689722 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 46689820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 42606320 - 42606416
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  42606320 gagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 42606416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 45539688 - 45539593
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  45539688 agaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 45539593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 36899294 - 36899392
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  36899294 gagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagtgtaaatagtccctgttgtcaaatttctaacgtgatgtc 36899392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 2388672 - 2388768
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||    
T  2388672 gagaatagtctctacatttcaataaatgtttttaaaatccctacattttttctccgttagcttaaatagtccctgttgtcaaatttctaacgtgatg 2388768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 22406888 - 22406979
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  22406888 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 22406979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 27475773 - 27475682
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  27475773 tagtccttatatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 27475682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 34950231 - 34950140
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  34950231 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacatgatg 34950140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 4199493 - 4199577
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  4199493 gagaatagtccttatatttcaataaatgtttttaaaatccctacatttttcatccgttagcgtaaatagtccctgctgtcaaatt 4199577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 35300788 - 35300876
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacg 260  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| || ||||||  |||| ||||||| |||||| |||||||||    
T  35300788 aataatccttacatttcaataaatgtttttaaaatccctacatttttcatccgttagcacaaatggtccctggtgtcaattttctaacg 35300876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 4199935 - 4199876
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  4199935 gagaatagtccctacatttcaataaatgtttttaaaatccctatatttttcctccgttag 4199876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 20826772 - 20826853
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || || |||  ||||||||||||  ||||||||    
T  20826772 aatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgtcagcacaaatagtccctgccgtcaaatt 20826853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 45539250 - 45539299
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45539250 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 45539299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 2389112 - 2389060
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2389112 gagaatagtccctacattttaataaatgtttttaaaatccctacatttttcct 2389060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 20831147 - 20831067
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaat 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  || ||||||  ||||||||||||  |||||||    
T  20831147 aatagtccttacatttcaataaatgtttttaaaatccctacattttttatccgttagcacaaatagtccctgccgtcaaat 20831067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 36899734 - 36899682
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36899734 gagaatagtccctacatttcaataaatgtttttaaaatccctatatttttcct 36899682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 42606760 - 42606708
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42606760 gagaatagtccctacatttcaataaatatttttaaaatccctacatttttcct 42606708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 34949796 - 34949855
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  34949796 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 34949855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 46690162 - 46690112
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46690162 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 46690112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 48868633 - 48868588
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  48868633 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 48868588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 22407320 - 22407264
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  22407320 aatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 22407264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 27475430 - 27475475
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacat 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  27475430 gagaatagtccctacatttcaatgaatgtttttaaaatccctacat 27475475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 54588499 - 54588551
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 222  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  54588499 agaatagtccatacatttcaataaatgtttttaaaattcctacattttacctc 54588551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 48867694 - 48867739
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||    
T  48867694 aatagtccctacatttcaataaatatttttaaaatccttacatttt 48867739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 7248535 - 7248468
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtc 239  Q
    ||||||||  |||||| ||||||| |||||||||||||||||||||||  | |||||| |||||||||    
T  7248535 aatagtcctcacattttaataaatatttttaaaatccctacatttttctgccgttagcataaatagtc 7248468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 9217862 - 9217909
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  9217862 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 9217909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 51755962 - 51755915
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  51755962 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 51755915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 54589624 - 54589566
Alignment:
Q  170 agaatagtccctacatttcaataaa-tgtttttaaaatccctacatttttcctcagtta 227  Q
    ||||||||||||| ||||||| ||| | |||||||||||||||||||||||||| ||||    
T  54589624 agaatagtccctatatttcaaaaaaatatttttaaaatccctacatttttcctccgtta 54589566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 3799766 - 3799811
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||| |||||||| | |||||||||||||||||||||||||||    
T  3799766 aatagtctctacatttaagtaaatgtttttaaaatccctacatttt 3799811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 33225532 - 33225577
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||    
T  33225532 aatagtccctacatttaagtaaatgtttttaaaatccccacatttt 33225577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 35301927 - 35301858
Alignment:
Q  184 atttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    ||||| |||||| |||||||||| |||| |||||| ||||||||||  ||||||||||||  ||||||||    
T  35301927 atttcgataaatatttttaaaattcctatattttttctcagttagcacaaatagtccctgccgtcaaatt 35301858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 47343771 - 47343726
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||| |||||||| | |||||||||||||||||||||||||||    
T  47343771 aatagtctctacatttaagtaaatgtttttaaaatccctacatttt 47343726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 51587571 - 51587619
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacattttt 218  Q
    |||||||||  ||||||||||||||| ||||||||||||||| ||||||    
T  51587571 agaatagtcattacatttcaataaatatttttaaaatccctatattttt 51587619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 22814338 - 22814385
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||    
T  22814338 agaatagtccatacatttcattaaatgtttttaaaatcctcacatttt 22814385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 25770363 - 25770410
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| |||||||||||| |||||  |||||||    
T  25770363 agaatagtccctacatttcattaaatgtttttagaatcctcacatttt 25770410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 25770538 - 25770577
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  25770538 aatagtctttacatttcaataaatgtttttaaaatcccta 25770577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 43933482 - 43933529
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||| ||||||||||||  |||||||    
T  43933482 agaatagtccctacatttcattaaatatttttaaaatcctcacatttt 43933529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 44504134 - 44504181
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||| ||||||||||||  |||||||    
T  44504134 agaatagtccctacatttcattaaatatttttaaaatcctcacatttt 44504181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 44504434 - 44504387
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||    
T  44504434 agaatagtccttacatttcattaaatgtttttaaaatcctcacatttt 44504387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 132107 - 132069
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatcc 208  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  132107 agaatagtccttacatttcattaaatgtttttaaaatcc 132069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 37172123 - 37172161
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatcc 208  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  37172123 agaatagtctctacatttcattaaatgtttttaaaatcc 37172161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 9218561 - 9218524
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatc 207  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  9218561 agaatagtccctatatttcattaaatgtttttaaaatc 9218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 47342790 - 47342835
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||| | ||||||||||||||||| ||| |||||    
T  47342790 aatagtccctacatttaagtaaatgtttttaaaatcactatatttt 47342835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 1804712 - 1804614
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1804712 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 1804614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 6476127 - 6476225
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6476127 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 6476225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 11451236 - 11451138
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11451236 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 11451138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 27377689 - 27377787
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  27377689 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttatcaaatttctaacgtgatgtc 27377787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 3854112 - 3854203
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  3854112 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 3854203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 12089747 - 12089831
Alignment:
Q  181 tacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  12089747 tacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 12089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 22701558 - 22701649
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  22701558 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttaatgtaaatagtccctgttgtcaaatttctaacgtgatg 22701649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 26525514 - 26525598
Alignment:
Q  181 tacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  26525514 tacatttcaataaatatttttaaaatccctacatttttcctcaattagtgtaaatagtccctgttgtcaaatttctaacgtgatg 26525598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 34038289 - 34038205
Alignment:
Q  181 tacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34038289 tacatttcaataaatatttttaaaattcctacatttttcctcagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 34038205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 39097006 - 39096922
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  39097006 gagaataatccttacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgctgtcaaatt 39096922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 38110449 - 38110361
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||||||   |||||||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||| | ||||||||||    
T  38110449 tagtccctacattt---taaatgttttcaaaatccctacatttttcctccgttagcttaaatagtccatgttgtcaaatatttaacgtgatg 38110361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 1804272 - 1804322
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1804272 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 1804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 6476567 - 6476517
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6476567 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 6476517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 10708067 - 10708144
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtca 249  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||| || ||||||  ||||||||| ||||||||    
T  10708067 aatagtccttacatttcaataaatgtttttaaaattcctacatttttcatccgttagcacaaatagtccatgttgtca 10708144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 44934729 - 44934648
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || || |||  ||||||||||||  ||||||||    
T  44934729 aatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgtcagcacaaatagtccctgccgtcaaatt 44934648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 18105758 - 18105826
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagt 238  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||    
T  18105758 agaatattccctacatttcaataaaggtttttaaaattcctacatttttcctctgttagcataaatagt 18105826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 3854547 - 3854488
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  3854547 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 3854488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 12090175 - 12090116
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  12090175 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 12090116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 34037849 - 34037908
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  34037849 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 34037908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 10709517 - 10709567
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcc 220  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10709517 agaatagtccttacatttcaataaatgtttttaaaatccctacatttttcc 10709567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 44930027 - 44930107
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaat 252  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||  || ||||||  ||||||||||||  |||||||    
T  44930027 aatagtccttacatttcaataaatatttttaaaatccctacattttttatccgttagcacaaatagtccctgccgtcaaat 44930107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 39096564 - 39096623
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  39096564 gagaatagtccttacatttcaataaatgtttttaaaatccatacattttttctccgttag 39096623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 11450796 - 11450846
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  11450796 gagaataatccctacatttcaataaatgttttaaaaatccctacatttttc 11450846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 18107473 - 18107383
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacg 260  Q
    |||||| ||| ||||||| ||||||||||||||||||||||| |||||||||| |||| | ||||| || |||| | |||| |||||||||    
T  18107473 agaataatccttacattttaataaatgtttttaaaatccctaaatttttcctccgttatcataaatggttcctgctatcaattttctaacg 18107383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 27378129 - 27378079
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  27378129 gagaataatccctacatttcaataaatgttttaaaaatccctacatttttc 27378079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 23221876 - 23221933
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagtta 227  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  23221876 agaatagtacctacatttcaataaatgtttttaatatccctacatttttgctccgtta 23221933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 26525941 - 26525885
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| ||| |||||    
T  26525941 aatagtccctatatttcaataaatgtttttaaaatccctacaatttttctccgttag 26525885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 39947132 - 39947084
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcc 220  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  39947132 aatagtccttacatttcaataaatgtttttaaaatccgtacatttttcc 39947084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 2035650 - 2035697
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  2035650 agaataatccctacattttaataaatgtttttaaaatccctacatttt 2035697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 2036651 - 2036604
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2036651 agaatagtccctacatttcaattaatgtttttaaaatccctatatttt 2036604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 39945886 - 39945943
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagc 229  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||| | ||||||    
T  39945886 aatagtccttacatttcaataaatgtttttaaaatccttatatttttccaccgttagc 39945943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 3624961 - 3624925
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaat 206  Q
    |||||||||||||||||||||||||||||||||||||    
T  3624961 agaatagtccctacatttcaataaatgtttttaaaat 3624925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 2517455 - 2517502
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  2517455 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 2517502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 21216965 - 21217012
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  21216965 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 21217012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 21217369 - 21217322
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  21217369 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 21217322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 21265033 - 21265080
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  21265033 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 21265080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 21265437 - 21265390
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  21265437 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 21265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 22701984 - 22701945
Alignment:
Q  179 cctacatttcaataaatgtttttaaaatccctacattttt 218  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  22701984 cctacatttcaatgaatgtttttaaaatccctacattttt 22701945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 10710878 - 10710828
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcc 220  Q
    ||||||| || | |||||||||||||||||||||||| |||||||||||||    
T  10710878 agaatagcccttgcatttcaataaatgtttttaaaattcctacatttttcc 10710828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 10711048 - 10710978
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccct 242  Q
    |||||||| ||||||| | ||||| |||||||||||| ||||||||||| | ||||||  |||||||||||    
T  10711048 aatagtccttacattttagtaaatatttttaaaatccttacatttttcccccgttagcacaaatagtccct 10710978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 24093198 - 24093236
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatcc 208  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  24093198 agaatagtccctacatttcattaaatgtttttaaaatcc 24093236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 3691437 - 3691400
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatc 207  Q
    |||||||||||||||||||| |||||||||||||||||    
T  3691437 agaatagtccctacatttcattaaatgtttttaaaatc 3691400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 2191259 - 2191306
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||    
T  2191259 agaatagtccttacatttcattaaatgtttttaaaatcctcacatttt 2191306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 3691125 - 3691172
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||| ||||||||||| ||||||||||||||||||  |||||||    
T  3691125 agaatagttcctacatttcattaaatgtttttaaaatcctcacatttt 3691172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 7083564 - 7083611
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||| ||||||||||||  |||||||    
T  7083564 agaatagtccctacatttcattaaatttttttaaaatcctcacatttt 7083611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 21267416 - 21267369
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| |||||||||| |||||||  |||||||    
T  21267416 agaatagtccctacatttcattaaatgttttaaaaatcctcacatttt 21267369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 24093373 - 24093412
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  24093373 aatagtccttgcatttcaataaatgtttttaaaatcccta 24093412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 32861086 - 32861047
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  32861086 aatagtccttatatttcaataaatgtttttaaaatcccta 32861047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 23222909 - 23222864
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||| |||||||||||| |||||||||||||||  |||||||    
T  23222909 aatagtccttacatttcaatatatgtttttaaaatcctcacatttt 23222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 38110025 - 38110078
Alignment:
Q  169 gagaatagtccctacatttcaataaa-tgtttttaaaatccctacatttttcct 221  Q
    |||||||||  ||||||||||||||| |||||||||||||||| ||| ||||||    
T  38110025 gagaatagtttctacatttcaataaaatgtttttaaaatcccttcatgtttcct 38110078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 21182349 - 21182385
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaat 206  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  21182349 agaatagtccttacatttcattaaatgtttttaaaat 21182385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 40124116 - 40124214
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40124116 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 40124214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 32266523 - 32266621
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  32266523 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttagcgtaaatagtccttgttgtcaaatttctaacgtgatgtc 32266621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 47410903 - 47410807
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  47410903 gagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 47410807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 46802362 - 46802458
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  46802362 gagaatagtccctacatttcaataaaagtttttaaaatccctacatttttcctctgttagcgtaaatagtccctgttgtcaaatttttaacgtgatg 46802458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 30427719 - 30427812
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  30427719 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatgtc 30427812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 9122725 - 9122821
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  9122725 gagaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccgttagcgtaaatagtcactgttgtcaaatttctaacgtgatg 9122821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 45230175 - 45230266
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  45230175 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 45230266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 17968505 - 17968419
Alignment:
Q  181 tacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  17968505 tacatttcaataaatgtttttaaaatccctacatttttcctgagttagcgtaaataatccctgttgtcaaatttctaacgtgatgtc 17968419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 47410463 - 47410515
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47410463 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 47410515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 8997381 - 8997432
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8997381 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcc 8997432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 8998264 - 8998193
Alignment:
Q  189 aataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacg 260  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||||| ||| ||||||||||||||||    
T  8998264 aataaatgtttttaaaatccctacagttttccttcgttagcgtaaatagtctctgctgtcaaatttctaacg 8998193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 9123165 - 9123113
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9123165 gagaatagtctctacatttcaataaatgtttttaaaatccctacatttttcct 9123113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 17968077 - 17968136
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  17968077 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 17968136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 32266963 - 32266913
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32266963 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 32266913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 40124556 - 40124506
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40124556 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 40124506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 1501029 - 1500980
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1501029 agaatagtccctacatttcattaaatgtttttaaaatccctacatttttc 1500980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 46802799 - 46802750
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46802799 aatagtccctacattttaataaatgtttttaaaatccctacatttttcct 46802750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 12868475 - 12868558
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| |  || ||||| |||||||||| ||| ||| |||||    
T  12868475 agaatagttcctacatttcaataaatatttttaaaatccctacatttatattccgttagggtaaatagtctctgctgttaaatt 12868558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 30428154 - 30428095
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  30428154 gagaatagttcctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 30428095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 45230610 - 45230551
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||    
T  45230610 gagaatagtccctacatttcaatgaatgtttttaaaatccctatattttttctccgttag 45230551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 12869702 - 12869631
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccct 242  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||| ||| |||||   |||||||||||    
T  12869702 agaatagtccctacatttcaataaatgtttttaaaatccc-aaatttttactccgttaggacaaatagtccct 12869631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 36793622 - 36793574
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacattttt 218  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  36793622 agaatagtctctacattttaataaatgtttttaaaatccctacattttt 36793574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 1500101 - 1500150
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  1500101 agaatagtccctacatttcattgaatgtttttaaaatccctatatttttc 1500150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 45664729 - 45664786
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagtta 227  Q
    ||||||||| |||||||| ||||||||||||||||||||| |||||||| ||| ||||    
T  45664729 agaatagtctctacattttaataaatgtttttaaaatccccacatttttactccgtta 45664786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 3591210 - 3591171
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  3591210 aatagtccttacatttcaataaatgtttttaaaatcccta 3591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 5172787 - 5172834
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  5172787 agaatagtctctacatttcattaaatgtttttaaaatccttacatttt 5172834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 31889481 - 31889519
Alignment:
Q  175 agtccctacatttcaataaatgtttttaaaatccctaca 213  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31889481 agtccctacatttcaataaacgtttttaaaatccctaca 31889519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 36792282 - 36792339
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||| |||||| ||||||||||||| ||||||||||||||||||||| ||| |||||    
T  36792282 agaataatccctatatttcaataaatg-ttttaaaatccctacatttttactccgttag 36792339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 45665987 - 45665920
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtc 239  Q
    |||||| | ||| ||||||||||| ||||||||||||||||  |||| ||| |||||| |||||||||    
T  45665987 aatagttcttacgtttcaataaatatttttaaaatccctactgttttactccgttagcataaatagtc 45665920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 47541560 - 47541607
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||||||||| |||||| ||||||||||||||||||  |||||||    
T  47541560 agaatagtccctatatttcattaaatgtttttaaaatcctcacatttt 47541607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 5683609 - 5683571
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatcc 208  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  5683609 agaatagtccctacatttcattaaatatttttaaaatcc 5683571  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 5683205 - 5683250
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||| ||||||| ||||||||||  |||||||    
T  5683205 aatagtccctacatttcattaaatgtatttaaaatcctcacatttt 5683250  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 37717842 - 37717797
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||| |||||||||||||| ||||||||||||| ||| ||||    
T  37717842 aatagtccttacatttcaataaaggtttttaaaatccttacttttt 37717797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 50359167 - 50359204
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatc 207  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  50359167 agaatagtccctacatttcattaaatgttttttaaatc 50359204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 211
Target Start/End: Original strand, 19895628 - 19895656
Alignment:
Q  183 catttcaataaatgtttttaaaatcccta 211  Q
    |||||||||||||||||||||||||||||    
T  19895628 catttcaataaatgtttttaaaatcccta 19895656  T

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Target: scaffold0085 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 39901 - 39803
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 267  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39901 gagaatagtccctacatttcaataaatgtttttaaaatccttacatttttcctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatgtc 39803  T

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Target: scaffold0085; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 39461 - 39511
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39461 gagaataatccctacatttcaataaatgtttttaaaatccctacatttttc 39511  T

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Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 33847906 - 33848002
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  33847906 gagaatagtctctacatttcaataaatgtttttaaaatccctacattttttctccgttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 33848002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 884728 - 884819
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  884728 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 884819  T

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Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 1244057 - 1244148
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  1244057 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 1244148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 28898504 - 28898413
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  28898504 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgttgtcaaatttctaacgtgatg 28898413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 29784428 - 29784332
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  29784428 gagaatagtctttacatttcaataaatatttttaaaatccctacatttttcctctgttagcgtaaatagtctctgttgtcaagtttctaacgtgatg 29784332  T

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Target: chr7; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 41298290 - 41298381
Alignment:
Q  174 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||| |||||||||||||||||    
T  41298290 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccttgttgttaaatttctaacgtgatg 41298381  T

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Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 18443216 - 18443300
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  18443216 gagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgttagcgtaaatagtccctgctgtcaaatt 18443300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 18443658 - 18443599
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  18443658 gagaatagtccctacatttcaataaatgtttttaaaatccctatatttttcctccgttag 18443599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 22954086 - 22954138
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcct 221  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22954086 gagaatagtccctacattttaataaatgtttttaaaatccctacatttttcct 22954138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 1244492 - 1244433
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  1244492 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 1244433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 28898069 - 28898128
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  28898069 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 28898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 41298725 - 41298666
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  41298725 gagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 41298666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 33848345 - 33848296
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33848345 agaatagtccctacatttcaataaatgtttttaaaattcctacatttttc 33848296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 29783975 - 29784034
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||    
T  29783975 gagaatagtccctatatttcaataaatgtttttaaaattcctacattttttctccgttag 29784034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 27310089 - 27310138
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  27310089 agaatggtccctacatttcattaaatgtttttaaaatccctacatttttc 27310138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 30939612 - 30939563
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30939612 agaatagtccctacatttcattaaatatttttaaaatccctacatttttc 30939563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 27311096 - 27311048
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacattttt 218  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27311096 agaatagtccctacatttcattaaatgtttttaaaattcctacattttt 27311048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 17075665 - 17075618
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  17075665 agaatagtccctacatttcattaaatgtttttaaaatcctcacatttt 17075618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 4152762 - 4152811
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttc 219  Q
    |||||| ||||||||||| | | |||||||||||||||||||||||||||    
T  4152762 agaataatccctacattttattgaatgtttttaaaatccctacatttttc 4152811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 17075261 - 17075308
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| |||| |||||||||||||  |||||||    
T  17075261 agaatagtccctacatttcattaaaagtttttaaaatcctcacatttt 17075308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 20544184 - 20544145
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  20544184 aatagtccttgcatttcaataaatgtttttaaaatcccta 20544145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 22948926 - 22948879
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||||| |||||||||| ||||||||||||||||||  |||||||    
T  22948926 agaatagtctctacatttcattaaatgtttttaaaatcctcacatttt 22948879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 32092270 - 32092317
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||| ||||||| ||||||||||||||||||  |||||||    
T  32092270 agaatagtccctgcatttcattaaatgtttttaaaatcctcacatttt 32092317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 42750166 - 42750119
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||| |||| |||||||||||||  |||||||    
T  42750166 agaatagtccctacatttcattaaacgtttttaaaatcctcacatttt 42750119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 20543953 - 20543991
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatcc 208  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  20543953 agaatagtccctacatttcattaaatttttttaaaatcc 20543991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 20544358 - 20544321
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatc 207  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  20544358 agaatagtccttacatttcattaaatgtttttaaaatc 20544321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 28852737 - 28852782
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||| ||||||||||||| ||||||||||||||||||  |||||||    
T  28852737 aatactccctacatttcattaaatgtttttaaaatcctcacatttt 28852782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 32092571 - 32092530
Alignment:
Q  176 gtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||| ||||||||||||||||||  |||||||    
T  32092571 gtccctacatttcattaaatgtttttaaaatcctcacatttt 32092530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 10466659 - 10466695
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcc 208  Q
    |||||||| |||||||||||||||||||||| |||||    
T  10466659 aatagtccttacatttcaataaatgtttttataatcc 10466695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 30938637 - 30938685
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacattttt 218  Q
    |||||| ||| ||||||| | |||||||||||||||| |||||||||||    
T  30938637 agaataatccatacattttattaaatgtttttaaaattcctacattttt 30938685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 44803680 - 44803644
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaat 206  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  44803680 agaatagtctctacatttcattaaatgtttttaaaat 44803644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 12734641 - 12734557
Alignment:
Q  181 tacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacgtgatg 265  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  12734641 tacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgtaaatagtccctgctgtcaaatttctaacgtgatg 12734557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 29917587 - 29917503
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||||||    
T  29917587 gagaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccgttagcgtaaatagtccttgctgtcaaatt 29917503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 4624413 - 4624484
Alignment:
Q  181 tacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaat 252  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||| ||||||||    
T  4624413 tacatttcaataaatgtttttaaaatccctacatttttcctccgttagcacaaatagtccctgctgtcaaat 4624484  T

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Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 29917145 - 29917204
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  29917145 gagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgttag 29917204  T

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Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 12734213 - 12734272
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||    
T  12734213 gagaatagtccctacatttcaatgaatatttttaaaatccctacattttttctccgttag 12734272  T

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Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 24846003 - 24846056
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 222  Q
    ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  24846003 gagaatagtccttacatttcaataaatgtttttaaaattcctatatttttcctc 24846056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 26720363 - 26720420
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagtta 227  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||    
T  26720363 agaatagtccctacatttcattaaatatttttaaaatccctacattttttctctgtta 26720420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 36155315 - 36155384
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccc 241  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| ||| |||| | | |||||||||    
T  36155315 aatagtccctacattttaataaatgtttttaaaatccttacatttttactccgttatcattaatagtccc 36155384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 4624575 - 4624623
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacattttt 218  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  4624575 agaatagtctttacatttcaataaatgtttttaaaatccctacattttt 4624623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 4694478 - 4694434
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacattt 216  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  4694478 aatagtccctacatttaagtaaatgtttttaaaatccctacattt 4694434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 22601539 - 22601587
Alignment:
Q  169 gagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  22601539 gagaatagtccctacatttaaataaatgtttttaaaattcttacatttt 22601587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 44148619 - 44148691
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccct 242  Q
    |||||||||||||||||| |||||| |||||||||||||  |||||||| ||| |||| |  |||||||||||    
T  44148619 agaatagtccctacattttaataaacgtttttaaaatcctcacatttttactccgttatcaaaaatagtccct 44148691  T

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Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 21005995 - 21005956
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  21005995 aatagtccttacatttcaataaatgtttttaaaatcccta 21005956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 13315244 - 13315281
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatc 207  Q
    |||||||||||||||||||| |||||||||||||||||    
T  13315244 agaatagtccctacatttcattaaatgtttttaaaatc 13315281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 16662210 - 16662246
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaat 206  Q
    |||||||||||||||||||| ||||||||||||||||    
T  16662210 agaatagtccctacatttcattaaatgtttttaaaat 16662246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 6297504 - 6297551
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||| ||||||||||| ||||||||||||||||||  |||||||    
T  6297504 agaatagttcctacatttcattaaatgtttttaaaatcctcacatttt 6297551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 6297910 - 6297863
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||    
T  6297910 agaatagtccttacatttcattaaatgtttttaaaatcctcacatttt 6297863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 6298083 - 6298036
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||    
T  6298083 agaatagtccttacatttcattaaatgtttttaaaatcctcacatttt 6298036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 9800391 - 9800344
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||| || |||||| |||||||||||||||||| ||||||||    
T  9800391 agaatagtccatatatttcattaaatgtttttaaaatccttacatttt 9800344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 17914239 - 17914286
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||| | ||||||||||||||||||  |||||||    
T  17914239 agaatagtccctacattttattaaatgtttttaaaatcctcacatttt 17914286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 44024442 - 44024481
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  44024442 aatagtccttacatttcaataaatatttttaaaatcccta 44024481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Original strand, 6297688 - 6297718
Alignment:
Q  181 tacatttcaataaatgtttttaaaatcccta 211  Q
    |||||||||||||||||||||||||||||||    
T  6297688 tacatttcaataaatgtttttaaaatcccta 6297718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 12489270 - 12489308
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatcc 208  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  12489270 agaatagtccctacatttcattaaatatttttaaaatcc 12489308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 20682972 - 20682914
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttag 228  Q
    ||||| |||| ||||||| ||||||||||||||||||| | |||||||| ||| |||||    
T  20682972 agaatggtccttacattttaataaatgtttttaaaatctccacatttttactccgttag 20682914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 36156393 - 36156359
Alignment:
Q  183 catttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||||||||||||| ||||||||    
T  36156393 catttcaataaatgtttttaaaatccttacatttt 36156359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 20682750 - 20682787
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatc 207  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  20682750 agaatagtccttacattttaataaatgtttttaaaatc 20682787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 21006168 - 21006123
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttt 217  Q
    |||||||||||||||| | ||||||||||||||||||  |||||||    
T  21006168 aatagtccctacattttattaaatgtttttaaaatcctcacatttt 21006123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 16662519 - 16662483
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaat 206  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  16662519 agaatagttcctacatttcattaaatgtttttaaaat 16662483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 16682573 - 16682621
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacattttt 218  Q
    |||||||||  |||||||||| ||||||||||||||| | |||||||||    
T  16682573 agaatagtcattacatttcaaaaaatgtttttaaaattcttacattttt 16682621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 29318 - 29399
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatt 253  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||  ||||||||||||  ||||||||    
T  29318 aatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgttagcacaaatagtccctgccgtcaaatt 29399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 33040 - 32960
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaat 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  || ||||||  ||||||||||||  |||||||    
T  33040 aatagtccttacatttcaataaatgtttttaaaatccctacattttttatccgttagcacaaatagtccctgccgtcaaat 32960  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 107764 - 107854
Alignment:
Q  170 agaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctcagttagcgtaaatagtccctgttgtcaaatttctaacg 260  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||  ||| |||| |  ||||||||| |||||| || | |||||||    
T  107764 agaatagtccctacatttcaataaatatttttaaaatcctcacattttatctccgttatcaaaaatagtccatgttgttaattctctaacg 107854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 107939 - 107974
Alignment:
Q  172 aatagtccctacatttcaataaatgtttttaaaatc 207  Q
    |||||||| |||||||||||||||||||||||||||    
T  107939 aatagtccttacatttcaataaatgtttttaaaatc 107974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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