View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8324_1D_low_45 (Length: 207)
Name: NF8324_1D_low_45
Description: NF8324_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8324_1D_low_45 |
 | |
|
| [»] chr4 (3 HSPs) |
| |
|
| [»] scaffold0197 (1 HSPs) |
| | |
|
| [»] chr2 (4 HSPs) |
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| [»] chr8 (6 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 180; Significance: 2e-97; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 24860566 - 24860379
Alignment:
| Q |
20 |
cagaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24860566 |
cagaaacagcgctactctggaaacggagatcggttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
24860467 |
T |
|
| Q |
120 |
gcttttttggtacttgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagcg |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24860466 |
gcttttttggtacttgcggatttcgcgaagtgcaacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagcg |
24860379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 34 - 206
Target Start/End: Complemental strand, 34748761 - 34748589
Alignment:
| Q |
34 |
ctctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgtgcttttttggtact |
133 |
Q |
| |
|
||||||||||||||||| || |||||||| |||||||| |||||||| ||||| ||||| || ||||| |||||||| || || ||||| || ||||||| |
|
|
| T |
34748761 |
ctctggaaacggagatcagtcttgaaatcctgagcgatctcacgaaccagacgctggaaggggagtttgcggatgaggagttcggtgctcttctggtact |
34748662 |
T |
|
| Q |
134 |
tgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagc |
206 |
Q |
| |
|
| ||||| || || || ||||||||||| || | |||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
34748661 |
tacggatctcacgtagagcgacggttcctggtctgaaacggtgaggtttcttcactccaccggtggccggagc |
34748589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 44771102 - 44771153
Alignment:
| Q |
45 |
gagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatgga |
96 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
44771102 |
gagatcggttttgaaatcctgagcgatttcacgaacaagacgttggaatgga |
44771153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 21317594 - 21317408
Alignment:
| Q |
20 |
cagaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
119 |
Q |
| |
|
|||||||||| || |||||||| | |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| || |||||||| || |
|
|
| T |
21317594 |
cagaaacagcactgctctggaatctgagatcggttttgaaatcctgagcgatttcacgaacaagacgttggaatggaagttttcttatcagaagctcagt |
21317495 |
T |
|
| Q |
120 |
gcttttttggtacttgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagc |
206 |
Q |
| |
|
||| || ||||||||||||||||| ||||| || ||||||||||||||||||||||| || ||||||||||| ||||| || ||||| |
|
|
| T |
21317494 |
gctcttctggtacttgcggatttcacgaagcgccacggttccgggacggaaacggtgtggcttcttcactcctccggtcgccggagc |
21317408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 3930069 - 3930234
Alignment:
| Q |
20 |
cagaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
119 |
Q |
| |
|
|||||||||| |||||||| || || ||||| ||||||||||| ||||||||||||||||| | | ||||||||||||||| | |||||||| || || |
|
|
| T |
3930069 |
cagaaacagcactactctgaaatcgaagatcagttttgaaatcctgagcgatttcacgaaccaatctttggaatggaagtttcctaatgagaagttcagt |
3930168 |
T |
|
| Q |
120 |
gcttttttggtacttgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttctt |
185 |
Q |
| |
|
||| || || ||||||||||| || ||||||||||| ||||| |||||||| | ||| |||||||| |
|
|
| T |
3930169 |
gctcttctgatacttgcggatctcacgaagtgcgactgttcctggacggaatctgtgtggtttctt |
3930234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 3928717 - 3928858
Alignment:
| Q |
20 |
cagaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
119 |
Q |
| |
|
||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||| |||| | | || ||| |||||||| | ||||||||||| || |
|
|
| T |
3928717 |
cagaaacagcgctgatctggaatcggagatcagttttgaaatcctgagcgatttcatgaaccaatcttttgaaaggaagtttcctaatgagaagctcagt |
3928816 |
T |
|
| Q |
120 |
gcttttttggtacttgcggatttcgcgaagtgcgacggttcc |
161 |
Q |
| |
|
| | ||||| ||||| | |||||| || | |||||| ||||| |
|
|
| T |
3928817 |
gatcttttgatacttcctgatttcacgcaatgcgactgttcc |
3928858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0197 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0197
Description:
Target: scaffold0197; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 31031 - 30846
Alignment:
| Q |
20 |
cagaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
119 |
Q |
| |
|
|||||||||| || |||||||| | ||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||||| || |||||||| || |
|
|
| T |
31031 |
cagaaacagcactgctctggaatctgagataggttttgaaatcctgagcgatttcacgaacaagacgttggaatg-aagttttcttatcagaagctcagt |
30933 |
T |
|
| Q |
120 |
gcttttttggtacttgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagc |
206 |
Q |
| |
|
||| || ||||||||||||||||| ||||| || ||||||||||||||||||||||| || ||||||||||| ||||| || ||||| |
|
|
| T |
30932 |
gctcttctggtacttgcggatttcacgaagcgccacggttccgggacggaaacggtgtggcttcttcactcctccggtcgccggagc |
30846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 76; Significance: 2e-35; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 13576368 - 13576181
Alignment:
| Q |
20 |
cagaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
119 |
Q |
| |
|
|||||||||| || || || ||||||||||| ||||||||||| ||||| ||||| ||||| | | |||||||||||| || | ||||||||||| || |
|
|
| T |
13576368 |
cagaaacagcactgctttgaaaacggagatccgttttgaaatcctgagcaatttctcgaaccaatctttggaatggaagcttccttatgagaagctcggt |
13576269 |
T |
|
| Q |
120 |
gcttttttggtacttgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagcg |
207 |
Q |
| |
|
||| || || |||||||||||||| ||||| ||||||||||| ||||||||||| || || ||||||||||| |||||||| |||||| |
|
|
| T |
13576268 |
gctcttctgatacttgcggatttcacgaagagcgacggttccaggacggaaacgatgtggcttcttcactcctccggtggccggagcg |
13576181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 34571568 - 34571641
Alignment:
| Q |
34 |
ctctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggat |
107 |
Q |
| |
|
|||||||| || | ||| || |||||||| ||||| ||||||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
34571568 |
ctctggaatcgtaaatccgtcttgaaatcctgagcaatttcacgaacaagacgctggaatggaagtttacggat |
34571641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 34579050 - 34579103
Alignment:
| Q |
48 |
atctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttt |
101 |
Q |
| |
|
|||||| ||||||| ||||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
34579050 |
atctgtcttgaaattctgagcaatttcacgaacaagacgctggaatggaagttt |
34579103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 34584799 - 34584852
Alignment:
| Q |
48 |
atctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttt |
101 |
Q |
| |
|
|||||| ||||||| ||||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
34584799 |
atctgtcttgaaattctgagcaatttcacgaacaagacgctggaatggaagttt |
34584852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 34 - 207
Target Start/End: Complemental strand, 26592174 - 26592001
Alignment:
| Q |
34 |
ctctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgtgcttttttggtact |
133 |
Q |
| |
|
||||| ||||||||||| || |||||||| ||||| || |||||||| ||||| ||||| |||||||| || |||||||| || ||||| || ||||||| |
|
|
| T |
26592174 |
ctctgaaaacggagatccgtcttgaaatcctgagcaatctcacgaacaagacgctggaaaggaagtttgcgaatgagaagttcggtgctcttctggtact |
26592075 |
T |
|
| Q |
134 |
tgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagcg |
207 |
Q |
| |
|
||||||| || || |||||||||||||| || | ||||||||| || ||||||||||||||||| || |||||| |
|
|
| T |
26592074 |
tgcggatctcacggagtgcgacggttcctggcctgaaacggtgtggcttcttcactccgccggtcgccggagcg |
26592001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 43479782 - 43479968
Alignment:
| Q |
20 |
cagaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
119 |
Q |
| |
|
|||||||||||||||||||||| | |||||| ||||||||||| ||||||||||| | ||| | | |||||||||||| || | |||||||||||| || |
|
|
| T |
43479782 |
cagaaacagcgctactctggaacctgagatcagttttgaaatcctgagcgatttccctaaccaatctttggaatggaagcttcctgatgagaagctcggt |
43479881 |
T |
|
| Q |
120 |
gcttttttggtacttgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagc |
206 |
Q |
| |
|
|| || || ||||||||||| || ||||| || || ||||| |||||||| | ||| || ||||||||||| |||||||| ||||| |
|
|
| T |
43479882 |
actcttctgatacttgcggatctcacgaagagcaacagttccaggacggaatctgtgtggcttcttcactcctccggtggccggagc |
43479968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 38799513 - 38799395
Alignment:
| Q |
22 |
gaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgtgc |
121 |
Q |
| |
|
||||| ||||| |||||||| | |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
38799513 |
gaaactgcgctgctctggaatctcagatctgtcttgaaatcttgagcaatttcacgaacaagacgttggaatggaagtttacggatgagaagctcagtgc |
38799414 |
T |
|
| Q |
122 |
ttttttggtacttgcggat |
140 |
Q |
| |
|
| || || ||||| ||||| |
|
|
| T |
38799413 |
tcttctgatacttacggat |
38799395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 38822004 - 38822122
Alignment:
| Q |
22 |
gaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgtgc |
121 |
Q |
| |
|
||||| ||||| |||||||| | |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
38822004 |
gaaactgcgctgctctggaatctcagatctgtcttgaaatcttgagcaatttcacgaacaagacgttggaatggaagtttacggatgagaagctcagtgc |
38822103 |
T |
|
| Q |
122 |
ttttttggtacttgcggat |
140 |
Q |
| |
|
| || || ||||| ||||| |
|
|
| T |
38822104 |
tcttctgatacttacggat |
38822122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 206
Target Start/End: Complemental strand, 25865694 - 25865534
Alignment:
| Q |
46 |
agatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgtgcttttttggtacttgcggatttcgc |
145 |
Q |
| |
|
||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||| || ||||| | |||||| || || || || ||||| ||||| || | |
|
|
| T |
25865694 |
agatccgttttgaaatcctgagcaatttcacgaacaagacgctggaatggaagcttacggatcaaaagctcagtactcttctgatacttacggatctcac |
25865595 |
T |
|
| Q |
146 |
gaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagc |
206 |
Q |
| |
|
|||| || |||||||| ||||| |||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
25865594 |
gaagagcaacggttccaggacgataacgatgaggcttcttcactccgccggtggttggagc |
25865534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 41943950 - 41943787
Alignment:
| Q |
34 |
ctctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgtgcttttttggtact |
133 |
Q |
| |
|
|||||||| | |||||| || |||||||||||||| ||||||||||| ||||||||||||||||| || ||||| | ||| || || || || ||||| | |
|
|
| T |
41943950 |
ctctggaatctgagatccgtcttgaaatcttgagcaatttcacgaacaagacgttggaatggaagcttacggatcaaaagatcagtactcttctggtatt |
41943851 |
T |
|
| Q |
134 |
tgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggt |
197 |
Q |
| |
|
| ||||| || |||||||| ||||| || ||||| | || ||||||||||| ||||| ||||| |
|
|
| T |
41943850 |
tacggatctcacgaagtgcaacggtaccaggacgatagcgatgaggtttcttgactccaccggt |
41943787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 71; Significance: 2e-32; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 12531512 - 12531326
Alignment:
| Q |
20 |
cagaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
119 |
Q |
| |
|
|||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||| || | || |||||||| || |
|
|
| T |
12531512 |
cagaaacagcactgctttggaatcggagatctgttttgaaatcttgagcgatttcacgaacaagcctctggaatggaagcttccttataagaagctcggt |
12531413 |
T |
|
| Q |
120 |
gcttttttggtacttgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagc |
206 |
Q |
| |
|
||| || |||||||||||||| || |||||||| || ||||| |||||||| | ||| || ||||| ||||| ||||| || ||||| |
|
|
| T |
12531412 |
gctcttctggtacttgcggatctcacgaagtgcaacagttcctggacggaatctgtgtggcttcttgactcctccggttgccggagc |
12531326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 12547107 - 12547293
Alignment:
| Q |
20 |
cagaaacagcgctactctggaaacggagatctgttttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgt |
119 |
Q |
| |
|
|||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||| || | || |||||||| || |
|
|
| T |
12547107 |
cagaaacagcactgctttggaatcggagatctgttttgaaatcttgagcgatttcacgaacaagcctctggaatggaagcttccttataagaagctcggt |
12547206 |
T |
|
| Q |
120 |
gcttttttggtacttgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactccgccggtggctggagc |
206 |
Q |
| |
|
||| || |||||||||||||| || |||||||| || ||||| |||||||| | ||| || ||||| ||||| ||||| || ||||| |
|
|
| T |
12547207 |
gctcttctggtacttgcggatctcacgaagtgcaacagttcctggacggaatctgtgtggcttcttgactcctccggttgccggagc |
12547293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 9866853 - 9866937
Alignment:
| Q |
109 |
agaagctctgtgcttttttggtact--tgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcactcc |
191 |
Q |
| |
|
|||||||| |||| |||||||||| | ||||| || ||||| || |||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
9866853 |
agaagctcaatgctcttttggtactcttacggatctcacgaagcgcaacggttccaggacggaaacggtgtggcttcttcactcc |
9866937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 9869946 - 9869866
Alignment:
| Q |
109 |
agaagctctgtgcttttttggtacttgcggatttcgcgaagtgcgacggttccgggacggaaacggtgaggtttcttcact |
189 |
Q |
| |
|
|||||||| ||||| || |||||||| ||||| || ||||| || |||||||| ||| ||||| ||| |||||||||||| |
|
|
| T |
9869946 |
agaagctcagtgctcttctggtacttacggatctcacgaagagcaacggttccatgacagaaacagtgtggtttcttcact |
9869866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 7594402 - 7594487
Alignment:
| Q |
55 |
ttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggatgagaagctctgtgcttttttggtacttgcggat |
140 |
Q |
| |
|
|||||||||||||| |||||||| || ||||| || |||||||| || ||||| | |||||| || || || |||||||| ||||| |
|
|
| T |
7594402 |
ttgaaatcttgagcaatttcacggacaagacgctgaaatggaagcttgcggatcaaaagctcagtactcttctggtacttacggat |
7594487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 18492793 - 18492741
Alignment:
| Q |
55 |
ttgaaatcttgagcgatttcacgaacgagacgttggaatggaagttttcggat |
107 |
Q |
| |
|
||||||||||||| ||||||||||| |||| |||||||||||||| ||||| |
|
|
| T |
18492793 |
ttgaaatcttgagaaatttcacgaacaagacactggaatggaagtttacggat |
18492741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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