View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8324_1D_low_5 (Length: 389)

Name: NF8324_1D_low_5
Description: NF8324_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8324_1D_low_5
NF8324_1D_low_5
[»] chr6 (24 HSPs)
chr6 (24-389)||(13612059-13612439)
chr6 (327-382)||(14978542-14978597)
chr6 (331-382)||(23527299-23527350)
chr6 (327-382)||(25618899-25618954)
chr6 (331-385)||(19363365-19363419)
chr6 (347-389)||(20556026-20556068)
chr6 (344-385)||(20224878-20224919)
chr6 (344-385)||(22118862-22118903)
chr6 (285-321)||(18697372-18697408)
chr6 (285-321)||(18707123-18707159)
chr6 (327-382)||(18697428-18697483)
chr6 (342-389)||(23415914-23415961)
chr6 (331-382)||(33443964-33444015)
chr6 (327-381)||(17229064-17229118)
chr6 (327-381)||(18454125-18454179)
chr6 (327-381)||(20137572-20137626)
chr6 (327-381)||(22195243-22195297)
chr6 (332-381)||(8226740-8226789)
chr6 (332-381)||(17201080-17201129)
chr6 (331-384)||(19024297-19024350)
chr6 (332-381)||(23531896-23531945)
chr6 (325-382)||(23993015-23993072)
chr6 (342-382)||(18895485-18895525)
chr6 (325-389)||(19005934-19005998)
[»] chr5 (15 HSPs)
chr5 (24-381)||(14048668-14049040)
chr5 (24-381)||(41094818-41095181)
chr5 (331-385)||(26739793-26739847)
chr5 (327-389)||(22413083-22413145)
chr5 (325-382)||(15797337-15797394)
chr5 (331-381)||(27988105-27988155)
chr5 (331-376)||(26731989-26732034)
chr5 (325-389)||(2153944-2154008)
chr5 (354-389)||(20901318-20901353)
chr5 (327-382)||(40723459-40723514)
chr5 (331-385)||(21327419-21327473)
chr5 (331-381)||(36315446-36315496)
chr5 (327-381)||(41860581-41860635)
chr5 (332-381)||(40726683-40726732)
chr5 (285-321)||(31062185-31062221)
[»] scaffold0601 (1 HSPs)
scaffold0601 (331-389)||(7577-7635)
[»] scaffold0394 (1 HSPs)
scaffold0394 (327-389)||(13046-13108)
[»] scaffold0083 (1 HSPs)
scaffold0083 (327-389)||(42293-42355)
[»] chr3 (18 HSPs)
chr3 (331-381)||(32402182-32402232)
chr3 (327-389)||(50243809-50243871)
chr3 (327-382)||(16644958-16645013)
chr3 (344-385)||(23317933-23317974)
chr3 (325-386)||(53300820-53300881)
chr3 (327-382)||(325076-325131)
chr3 (331-382)||(9578547-9578598)
chr3 (331-382)||(13919770-13919821)
chr3 (327-382)||(24152385-24152440)
chr3 (344-382)||(320172-320210)
chr3 (332-382)||(5224325-5224375)
chr3 (331-385)||(15207837-15207891)
chr3 (331-381)||(17738182-17738232)
chr3 (331-381)||(19039502-19039552)
chr3 (331-381)||(23275566-23275616)
chr3 (332-381)||(22146768-22146817)
chr3 (332-381)||(37641504-37641553)
chr3 (289-321)||(44495482-44495514)
[»] chr2 (10 HSPs)
chr2 (331-385)||(26393324-26393378)
chr2 (331-386)||(27845559-27845614)
chr2 (327-389)||(22172971-22173033)
chr2 (327-382)||(7187422-7187477)
chr2 (343-382)||(23079873-23079912)
chr2 (331-382)||(25109790-25109841)
chr2 (331-385)||(18546139-18546193)
chr2 (331-381)||(19672770-19672820)
chr2 (325-382)||(24682222-24682279)
chr2 (325-389)||(24528859-24528923)
[»] chr1 (19 HSPs)
chr1 (327-382)||(13880537-13880592)
chr1 (327-382)||(48521409-48521464)
chr1 (331-384)||(21342993-21343046)
chr1 (331-384)||(21347858-21347911)
chr1 (326-381)||(14801387-14801442)
chr1 (326-381)||(14810261-14810316)
chr1 (331-385)||(21683898-21683952)
chr1 (331-385)||(47191503-47191557)
chr1 (335-382)||(16382041-16382088)
chr1 (327-386)||(20453631-20453690)
chr1 (331-381)||(14294728-14294778)
chr1 (331-381)||(20959031-20959081)
chr1 (327-381)||(21042505-21042559)
chr1 (332-382)||(22130025-22130075)
chr1 (331-381)||(27652392-27652442)
chr1 (331-381)||(51131458-51131508)
chr1 (361-389)||(21708181-21708209)
chr1 (361-389)||(21712724-21712752)
chr1 (285-321)||(48521353-48521389)
[»] scaffold0112 (1 HSPs)
scaffold0112 (327-389)||(23116-23178)
[»] chr7 (17 HSPs)
chr7 (331-385)||(11768086-11768140)
chr7 (327-382)||(9176834-9176889)
chr7 (334-385)||(11524795-11524846)
chr7 (331-382)||(14037119-14037170)
chr7 (331-382)||(14347149-14347200)
chr7 (331-382)||(16997094-16997145)
chr7 (327-382)||(18455589-18455644)
chr7 (331-382)||(37793391-37793442)
chr7 (327-378)||(38519681-38519732)
chr7 (331-385)||(17016593-17016647)
chr7 (331-381)||(42462873-42462923)
chr7 (332-381)||(1856401-1856450)
chr7 (332-381)||(13648284-13648333)
chr7 (332-381)||(13917573-13917622)
chr7 (332-381)||(19485973-19486022)
chr7 (332-381)||(42374305-42374354)
chr7 (332-380)||(25926301-25926349)
[»] chr4 (10 HSPs)
chr4 (331-385)||(15792696-15792750)
chr4 (285-321)||(12841506-12841542)
chr4 (325-389)||(14970019-14970083)
chr4 (325-389)||(19617387-19617451)
chr4 (327-382)||(12611907-12611962)
chr4 (327-382)||(12841562-12841617)
chr4 (331-382)||(14852023-14852074)
chr4 (327-381)||(23802406-23802460)
chr4 (332-381)||(22354671-22354720)
chr4 (342-382)||(32306151-32306191)
[»] scaffold0480 (1 HSPs)
scaffold0480 (326-381)||(10332-10387)
[»] scaffold0290 (1 HSPs)
scaffold0290 (327-382)||(1070-1125)
[»] scaffold0169 (1 HSPs)
scaffold0169 (331-382)||(28695-28746)
[»] chr8 (12 HSPs)
chr8 (327-382)||(17460207-17460262)
chr8 (327-381)||(22245237-22245291)
chr8 (327-381)||(22252315-22252369)
chr8 (325-389)||(1326437-1326501)
chr8 (331-382)||(19936239-19936290)
chr8 (331-382)||(20501229-20501280)
chr8 (332-382)||(14396910-14396960)
chr8 (327-381)||(22385077-22385131)
chr8 (331-381)||(28398490-28398540)
chr8 (331-380)||(22418588-22418637)
chr8 (345-386)||(45289756-45289797)
chr8 (332-384)||(25483439-25483491)
[»] scaffold0009 (1 HSPs)
scaffold0009 (327-381)||(191798-191852)
[»] scaffold0001 (1 HSPs)
scaffold0001 (331-385)||(447415-447469)
[»] scaffold0057 (1 HSPs)
scaffold0057 (327-384)||(72427-72484)
[»] scaffold0191 (1 HSPs)
scaffold0191 (325-389)||(3606-3670)
[»] scaffold0149 (1 HSPs)
scaffold0149 (325-389)||(34282-34346)
[»] scaffold1835 (1 HSPs)
scaffold1835 (331-382)||(209-260)
[»] scaffold0877 (1 HSPs)
scaffold0877 (327-382)||(2027-2082)
[»] scaffold0125 (1 HSPs)
scaffold0125 (331-382)||(1050-1101)
[»] scaffold0107 (1 HSPs)
scaffold0107 (331-382)||(13551-13602)
[»] scaffold0012 (1 HSPs)
scaffold0012 (331-382)||(220333-220384)
[»] scaffold0914 (1 HSPs)
scaffold0914 (331-385)||(2646-2700)
[»] scaffold0347 (1 HSPs)
scaffold0347 (331-385)||(9803-9857)
[»] scaffold0200 (1 HSPs)
scaffold0200 (332-382)||(18596-18646)
[»] scaffold0145 (1 HSPs)
scaffold0145 (331-381)||(10739-10789)
[»] scaffold0121 (1 HSPs)
scaffold0121 (335-389)||(7726-7780)
[»] scaffold0117 (2 HSPs)
scaffold0117 (332-382)||(42674-42724)
scaffold0117 (342-382)||(40218-40258)
[»] scaffold0114 (1 HSPs)
scaffold0114 (331-381)||(46242-46292)
[»] scaffold0081 (1 HSPs)
scaffold0081 (344-382)||(4003-4041)
[»] scaffold0022 (1 HSPs)
scaffold0022 (331-381)||(81192-81242)
[»] scaffold0004 (1 HSPs)
scaffold0004 (331-381)||(333239-333289)
[»] scaffold0494 (1 HSPs)
scaffold0494 (325-382)||(35-92)
[»] scaffold0162 (1 HSPs)
scaffold0162 (325-382)||(25474-25531)
[»] scaffold0040 (1 HSPs)
scaffold0040 (327-376)||(14258-14307)
[»] scaffold0010 (1 HSPs)
scaffold0010 (331-380)||(7211-7260)
[»] scaffold0535 (1 HSPs)
scaffold0535 (325-389)||(7570-7634)
[»] scaffold0500 (1 HSPs)
scaffold0500 (285-317)||(8336-8368)
[»] scaffold0016 (1 HSPs)
scaffold0016 (285-321)||(118828-118864)
[»] scaffold0007 (1 HSPs)
scaffold0007 (285-321)||(163630-163666)


Alignment Details
Target: chr6 (Bit Score: 295; Significance: 1e-165; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 24 - 389
Target Start/End: Original strand, 13612059 - 13612439
Alignment:
Q  24 acatcaaataacatggactgaattcaaatagataaggcaacaataataagaagtaacacgcatgaataacaaaggttaaggtacacagcaacagcacaag 123  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13612059 acatcaaataacaaggactgaattcaaatagataaggcaacaataataagaagtaacactcatgaataacaaaggttaaggtacacagcaacagcacaag 13612158  T
Q  124 aactaatattcaataaatcggagccttcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcatggattcagagattataat 223  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13612159 aactaatattcaataaatcggagccatcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcatggattcagagattataat 13612258  T
Q  224 atacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctccaattctcaaaaataaaac 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||    
T  13612259 atacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctccaattatcaaaaactaaac 13612358  T
Q  324 c---------------acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |               ||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||    
T  13612359 ctacaacatgttaaatacaattatcagaattacagacttaggagaattgattgttagtcccacccttacattaacaatgaa 13612439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 14978597 - 14978542
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| ||||||||||||  ||||| |||||||||||||||||||||||    
T  14978597 aattatcagaatcacaggcttaagaagattgaatgttagtcccacccttaccttaa 14978542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 23527350 - 23527299
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  23527350 atcagaattacaggcttaagaaaattgaatgctagtcccacccttaccttaa 23527299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 25618954 - 25618899
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| ||||||||||||  ||||| |||||||||||||||||||||||    
T  25618954 aattatcagaatcacaggcttaagaagattgaatgttagtcccacccttaccttaa 25618899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 19363365 - 19363419
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||| | |||||||||| |||||| |||||||| |||||||||||||||||    
T  19363365 atcagaatcataggcttaagaaaattgaatgttagtctcacccttaccttaacaa 19363419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 389
Target Start/End: Complemental strand, 20556068 - 20556026
Alignment:
Q  347 taagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  20556068 taagaaaattgaatgttagtcccacccttaccttaacaatgaa 20556026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 385
Target Start/End: Original strand, 20224878 - 20224919
Alignment:
Q  344 gcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  20224878 gcttaagagaattgaatgttagtctcacccttaccttaacaa 20224919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 385
Target Start/End: Original strand, 22118862 - 22118903
Alignment:
Q  344 gcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  22118862 gcttaagagaattgaatgttagtctcacccttaccttaacaa 22118903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 18697372 - 18697408
Alignment:
Q  285 tcacttttaacctaattctccaattctcaaaaataaa 321  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18697372 tcacttttaacctaattctccaattctcaaaactaaa 18697408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 18707123 - 18707159
Alignment:
Q  285 tcacttttaacctaattctccaattctcaaaaataaa 321  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18707123 tcacttttaacctaattctccaattctcaaaactaaa 18707159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 18697428 - 18697483
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| | ||||||||||  ||||| || ||||||||||||||||||||    
T  18697428 aattatcagaatcataggcttaagaagattgaatgctagtcccacccttaccttaa 18697483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 389
Target Start/End: Original strand, 23415914 - 23415961
Alignment:
Q  342 aggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    ||||||||||  ||||| ||||||||||||||||||||||| ||||||    
T  23415914 aggcttaagaagattgaatgttagtcccacccttaccttaagaatgaa 23415961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 33443964 - 33444015
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||   ||||||||||||||| |||||||| ||||||||||||||    
T  33443964 atcagaattatcagcttaagagaattgaatgttagtctcacccttaccttaa 33444015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 17229118 - 17229064
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||| ||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  17229118 aattattagaatcataggcttaagaagattgaatgttagtcccacccttacctta 17229064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 18454125 - 18454179
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||||| | | ||||||||  ||||| ||||||||||||||||||||||    
T  18454125 aattatcagaatcatatgcttaagaagattgaatgttagtcccacccttacctta 18454179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 20137572 - 20137626
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||||| | ||||||||||  ||||| |||||||||||||||| |||||    
T  20137572 aattatcagaatcataggcttaagaagattgaatgttagtcccaccctttcctta 20137626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 22195297 - 22195243
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||||| | ||||||||||  ||||| |||||||||||||||| |||||    
T  22195297 aattatcagaatcataggcttaagaagattgaatgttagtcccaccctttcctta 22195243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 8226789 - 8226740
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  8226789 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 8226740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 17201129 - 17201080
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  17201129 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 17201080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 19024297 - 19024350
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaaca 384  Q
    ||||||||||||| ||||| |||||||| ||  |||| ||||||||||||||||    
T  19024297 atcagaattacagacttaatagaattgaatgcaagtctcacccttaccttaaca 19024350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 23531945 - 23531896
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  23531945 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 23531896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 23993015 - 23993072
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||| ||||||||| || || ||||  ||||| |||||||||||||||||||||||    
T  23993015 acaattttcagaattatagactcaagattattgaatgttagtcccacccttaccttaa 23993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 18895525 - 18895485
Alignment:
Q  342 aggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||| |||||| |||||||| ||||||||||||||    
T  18895525 aggcttaagaaaattgaatgttagtctcacccttaccttaa 18895485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 19005934 - 19005998
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||||| | || || ||||  ||||| |||||||| |||||||||||||||||||||    
T  19005934 acaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaacaatgaa 19005998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 287; Significance: 1e-161; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 24 - 381
Target Start/End: Original strand, 14048668 - 14049040
Alignment:
Q  24 acatcaaataacatggactgaattcaaatagataaggcaacaataataagaagtaacacgcatgaataacaaaggttaaggtacacagcaacagcacaag 123  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14048668 acatcaaataacaaggactgaattcaaatggataaggcaacaataataagtagtaacacgcatgaataacaaaggttagggtacacagcaacagcacaag 14048767  T
Q  124 aactaatattcaataaatcggagccttcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcatggattcagagattataat 223  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14048768 aactaatattcaataaatcggagccatcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcatggattcagagattataat 14048867  T
Q  224 atacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctccaattctcaaaaataaaac 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||    
T  14048868 atacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctccaattttcaaaaactaaac 14048967  T
Q  324 c---------------acaattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |               |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14048968 ctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttaatcccacccttacctta 14049040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 24 - 381
Target Start/End: Complemental strand, 41095181 - 41094818
Alignment:
Q  24 acatcaaataacatggactgaattcaaatagataaggcaacaataataagaagtaacacgcatgaataacaaaggttaaggtacacagcaacagcacaag 123  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  41095181 acatcaaataacaaggactgaattcaaatagataaggcaacaataataagaagtaacactcatgaataacaaaggttaaggtacacagcaacaacacaag 41095082  T
Q  124 aactaatattcaataaatcggagccttcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcatggattcagagattataat 223  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||         | ||||||||||| ||||||||||||    
T  41095081 aactaatattcaataaatcggagccatcatcgatagacacattaactataatttaaacacggatt---------aaaatcatggatttagagattataat 41094991  T
Q  224 atacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctccaattctcaaaaataaaac 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||    
T  41094990 atacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcatttttaacctaattctccaattctcaaaaactaaac 41094891  T
Q  324 c---------------acaattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |               ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41094890 ctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttagtctcacccttacctta 41094818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 26739847 - 26739793
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  26739847 atcagaattacagacttaagagaattgaatgttagtctcacccttaccttaacaa 26739793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 22413083 - 22413145
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||||||||| | |||||||| |  ||||| ||||||||||||||||||||||||||||||    
T  22413083 aattatcagaatcataggcttaaaaagattgaatgttagtcccacccttaccttaacaatgaa 22413145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 15797337 - 15797394
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||| ||||||||||| |||||||||| |||||| || ||||||||||||||||||||    
T  15797337 acaactatcagaattagaggcttaagaaaattgagtgctagtcccacccttaccttaa 15797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 27988155 - 27988105
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| |||||||| |||||||||||||    
T  27988155 atcagaattacagacttaatagaattgaatgttagtctcacccttacctta 27988105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 376
Target Start/End: Complemental strand, 26732034 - 26731989
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccaccctta 376  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||    
T  26732034 atcagaattacagacttaagagaattgaatgttagtctcaccctta 26731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 2154008 - 2153944
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||||| | || || ||||  ||||| ||||||||||||||||||||||||||||||    
T  2154008 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaa 2153944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 354 - 389
Target Start/End: Complemental strand, 20901353 - 20901318
Alignment:
Q  354 attgattgttagtcccacccttaccttaacaatgaa 389  Q
    ||||| ||||||||||||||||||||||||||||||    
T  20901353 attgaatgttagtcccacccttaccttaacaatgaa 20901318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 40723514 - 40723459
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||| ||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  40723514 aattatcaaaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 40723459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 21327473 - 21327419
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||||| || ||||||| |||||| |||||||| ||| |||||||||||||    
T  21327473 atcagaattatagacttaagaaaattgaatgttagtctcactcttaccttaacaa 21327419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 36315446 - 36315496
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  36315446 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 36315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 41860635 - 41860581
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||| ||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  41860635 aattatcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 41860581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 40726683 - 40726732
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  40726683 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 40726732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 31062185 - 31062221
Alignment:
Q  285 tcacttttaacctaattctccaattctcaaaaataaa 321  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  31062185 tcacttttaacctaattcttcaattctcaaaactaaa 31062221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 331 - 389
Target Start/End: Original strand, 7577 - 7635
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    ||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||    
T  7577 atcagaattacagacttaatagaattgaatgttagtctcacccttaccttaacaatgaa 7635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 13046 - 13108
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||||||||| | ||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  13046 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaacaatgaa 13108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 42293 - 42355
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||||||||| | ||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  42293 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaacaatgaa 42355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 32402232 - 32402182
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  32402232 atcagaattacaagcttaagagaattgaatgttagtcccacccttacctta 32402182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 50243809 - 50243871
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||| ||||||||||||  ||||| |||||||| |||||||||||||||||||||    
T  50243809 aattatgagaatcacaggcttaagaagattgaatgttagtctcacccttaccttaacaatgaa 50243871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 16644958 - 16645013
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||  ||||||||||||  ||||| |||||||||||||||||||||||    
T  16644958 aattatcagaaacacaggcttaagaagattgaatgttagtcccacccttaccttaa 16645013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 385
Target Start/End: Complemental strand, 23317974 - 23317933
Alignment:
Q  344 gcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  23317974 gcttaagagaattgaatgttagtctcacccttaccttaacaa 23317933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 53300881 - 53300820
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaat 386  Q
    ||||| ||||||||||||| ||||| |||||||| || ||||| ||| ||||||||||||||    
T  53300881 acaatcatcagaattacagacttaatagaattgaatgctagtctcactcttaccttaacaat 53300820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 325076 - 325131
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| | ||||||||||  ||||| || ||||||||||||||||||||    
T  325076 aattatcagaatcataggcttaagaagattgaatgctagtcccacccttaccttaa 325131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 9578547 - 9578598
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  9578547 atcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 9578598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 13919770 - 13919821
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||   ||||||||||||||| |||||||| ||||||||||||||    
T  13919770 atcagaattatcagcttaagagaattgaatgttagtctcacccttaccttaa 13919821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 24152440 - 24152385
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| | ||||||| ||  ||||| |||||||||||||||||||||||    
T  24152440 aattatcagaatcataggcttaggaagattgaatgttagtcccacccttaccttaa 24152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 320172 - 320210
Alignment:
Q  344 gcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  320172 gcttaagagaattgaatgttagtctcacccttaccttaa 320210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 5224325 - 5224375
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  5224325 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 5224375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 15207837 - 15207891
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||||| | | |||||| |||||| |||||||| |||||||||||||||||    
T  15207837 atcagaattataagtttaagaaaattgaatgttagtctcacccttaccttaacaa 15207891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 17738182 - 17738232
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  17738182 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 17738232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 19039502 - 19039552
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  19039502 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 19039552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 23275566 - 23275616
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  23275566 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 23275616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 22146817 - 22146768
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  22146817 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 22146768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 37641553 - 37641504
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  37641553 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 37641504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 44495482 - 44495514
Alignment:
Q  289 ttttaacctaattctccaattctcaaaaataaa 321  Q
    |||||||||||||||||||||||||||| ||||    
T  44495482 ttttaacctaattctccaattctcaaaactaaa 44495514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 26393324 - 26393378
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  26393324 atcagaattacagacttaagagaattgaatgttagtctcacccttaccttaacaa 26393378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 27845559 - 27845614
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaat 386  Q
    |||||||||| || ||||||| |||||| |||||||| ||||||||||||||||||    
T  27845559 atcagaattatagacttaagaaaattgaatgttagtctcacccttaccttaacaat 27845614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 22173033 - 22172971
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||||| ||| | ||||||||||  ||||| |||||||| |||||||||||||||||||||    
T  22173033 aattatcataatcataggcttaagaagattgaatgttagtctcacccttaccttaacaatgaa 22172971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 7187422 - 7187477
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| | ||||||||||  ||||| |||||||| ||||||||||||||    
T  7187422 aattatcagaatcataggcttaagaagattgaatgttagtctcacccttaccttaa 7187477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 23079912 - 23079873
Alignment:
Q  343 ggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  23079912 ggcttaagaaaattgaatgttagtcccacccttaccttaa 23079873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 25109790 - 25109841
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||||| ||||| |||||||| || ||||| ||||||||||||||    
T  25109790 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttaa 25109841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 18546193 - 18546139
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||||| || ||||||| ||||||  ||||||| |||||||||||||||||    
T  18546193 atcagaattatagacttaagaaaattgaacgttagtctcacccttaccttaacaa 18546139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 19672770 - 19672820
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  19672770 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 19672820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 24682222 - 24682279
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||| ||||||| | || |||||||  ||||| |||||||||||||||||||||||    
T  24682222 acaattttcagaatcatagacttaagattattgaatgttagtcccacccttaccttaa 24682279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 24528923 - 24528859
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||||| | || || ||||  ||||| |||||||| |||||||||||||||||||||    
T  24528923 acaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaacaatgaa 24528859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 13880592 - 13880537
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| ||||||||||||  ||||| |||||||||||||||||||||||    
T  13880592 aattatcagaatcacaggcttaagaagattgaatgttagtcccacccttaccttaa 13880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 48521409 - 48521464
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| ||||||||||||  ||||| |||||||||||||||||||||||    
T  48521409 aattatcagaatcacaggcttaagaagattgaatgttagtcccacccttaccttaa 48521464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 21342993 - 21343046
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaaca 384  Q
    ||||||||||||| ||||| |||||||| || ||||||||||||||||||||||    
T  21342993 atcagaattacagacttaatagaattgaatgctagtcccacccttaccttaaca 21343046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 21347858 - 21347911
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaaca 384  Q
    ||||||||||||| ||||| |||||||| || ||||||||||||||||||||||    
T  21347858 atcagaattacagacttaatagaattgaatgctagtcccacccttaccttaaca 21347911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 14801387 - 14801442
Alignment:
Q  326 caattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||||||||||  ||||| ||||||||||||| ||||||||    
T  14801387 caattatcagaatcacaggcttaagaagattgaatgttagtcccacctttacctta 14801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 14810261 - 14810316
Alignment:
Q  326 caattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||||||||||  ||||| ||||||||||||| ||||||||    
T  14810261 caattatcagaatcacaggcttaagaagattgaatgttagtcccacctttacctta 14810316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 21683898 - 21683952
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||||| || ||||||| |||||| |||||||| |||||||||||||||||    
T  21683898 atcagaattatagacttaagaaaattgaatgttagtctcacccttaccttaacaa 21683952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 47191503 - 47191557
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||| | |||||||||| || ||| ||||||||||||||||||||||||||    
T  47191503 atcagaatcataggcttaagaaaactgaatgttagtcccacccttaccttaacaa 47191557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 382
Target Start/End: Original strand, 16382041 - 16382088
Alignment:
Q  335 gaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||| ||||| |||||||| || ||||||||||||||||||||    
T  16382041 gaattacagacttaatagaattgaatgctagtcccacccttaccttaa 16382088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 20453690 - 20453631
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaat 386  Q
    |||||||| ||| | ||||||||||  ||||| |||||||| ||||||||||||||||||    
T  20453690 aattatcaaaatcataggcttaagaagattgaatgttagtctcacccttaccttaacaat 20453631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 14294778 - 14294728
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  14294778 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 14294728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 20959031 - 20959081
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  20959031 atcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 20959081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 21042559 - 21042505
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||| ||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  21042559 aattatcataatcataggcttaagaagattgaatgttagtcccacccttacctta 21042505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 22130075 - 22130025
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  22130075 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 22130025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 27652442 - 27652392
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  27652442 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 27652392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 51131458 - 51131508
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  51131458 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 51131508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 361 - 389
Target Start/End: Original strand, 21708181 - 21708209
Alignment:
Q  361 gttagtcccacccttaccttaacaatgaa 389  Q
    |||||||||||||||||||||||||||||    
T  21708181 gttagtcccacccttaccttaacaatgaa 21708209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 361 - 389
Target Start/End: Original strand, 21712724 - 21712752
Alignment:
Q  361 gttagtcccacccttaccttaacaatgaa 389  Q
    |||||||||||||||||||||||||||||    
T  21712724 gttagtcccacccttaccttaacaatgaa 21712752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 48521353 - 48521389
Alignment:
Q  285 tcacttttaacctaattctccaattctcaaaaataaa 321  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  48521353 tcactcttaacctaattctccaattctcaaaactaaa 48521389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 23178 - 23116
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||||||||| | ||||||||||  ||||| |||||||| |||||||||||||||||||||    
T  23178 aattatcagaatcataggcttaagaagattgaatgttagtcacacccttaccttaacaatgaa 23116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 11768140 - 11768086
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||    
T  11768140 atcagaattataggcttaagaagattgaatgttagtcccacccttaccttaacaa 11768086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 9176889 - 9176834
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||||||||| ||||| | |||||| || ||||| ||||||||||||||    
T  9176889 aattatcagaattacagacttaataaaattgaatgctagtctcacccttaccttaa 9176834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 385
Target Start/End: Complemental strand, 11524846 - 11524795
Alignment:
Q  334 agaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    ||||||| | |||||||| |||||| |||||||| |||||||||||||||||    
T  11524846 agaattataagcttaagaaaattgaatgttagtctcacccttaccttaacaa 11524795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 14037119 - 14037170
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||||| ||||| |||||||| || ||||| ||||||||||||||    
T  14037119 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttaa 14037170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 14347149 - 14347200
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||||| ||||| |||||||| || ||||| ||||||||||||||    
T  14347149 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttaa 14347200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 16997094 - 16997145
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  16997094 atcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 16997145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 18455644 - 18455589
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| | | ||||||||  ||||| |||||||||||||||||||||||    
T  18455644 aattatcagaatcatatgcttaagaagattgaatgttagtcccacccttaccttaa 18455589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 37793442 - 37793391
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||  |||||||||  ||||| |||||||||||||||||||||||    
T  37793442 atcagaattaacggcttaagaagattgaatgttagtcccacccttaccttaa 37793391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 378
Target Start/End: Original strand, 38519681 - 38519732
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacc 378  Q
    |||||||||||| | ||||||||||  ||||| |||||||||||||||||||    
T  38519681 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttacc 38519732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 17016647 - 17016593
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    ||||||||||   ||||||||||||||| || ||||| |||||||||||||||||    
T  17016647 atcagaattatcagcttaagagaattgaatgctagtctcacccttaccttaacaa 17016593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 42462873 - 42462923
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  42462873 atcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 42462923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 1856450 - 1856401
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  1856450 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 1856401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 13648284 - 13648333
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  13648284 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 13648333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 13917622 - 13917573
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  13917622 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 13917573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 19486022 - 19485973
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  19486022 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 19485973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 42374354 - 42374305
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  42374354 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 42374305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 380
Target Start/End: Complemental strand, 25926349 - 25926301
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctt 380  Q
    ||||||| | ||||||||||  ||||| |||||||||||||||||||||    
T  25926349 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctt 25926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 15792696 - 15792750
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||| | |||||||||| |||||| ||||||||||||||||||||||||||    
T  15792696 atcagaatcataggcttaagaaaattgaatgttagtcccacccttaccttaacaa 15792750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 12841506 - 12841542
Alignment:
Q  285 tcacttttaacctaattctccaattctcaaaaataaa 321  Q
    |||||||||||||||||||||||||||||||| ||||    
T  12841506 tcacttttaacctaattctccaattctcaaaactaaa 12841542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 14970083 - 14970019
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||||| |||| || ||||  ||||| |||||||| |||||||||||||||||||||    
T  14970083 acaattttcagaatcacagactcaagattattgaatgttagtctcacccttaccttaacaatgaa 14970019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 19617451 - 19617387
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||||| | || || ||||  ||||| ||||||||||||||||||||||||||||||    
T  19617451 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaa 19617387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 12611907 - 12611962
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| | ||||||||||  ||||| |||||||| ||||||||||||||    
T  12611907 aattatcagaatcataggcttaagaagattgaatgttagtctcacccttaccttaa 12611962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 12841562 - 12841617
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| |  |||||||||  ||||| |||||||||||||||||||||||    
T  12841562 aattatcagaatcatgggcttaagaagattgaatgttagtcccacccttaccttaa 12841617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 14852074 - 14852023
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||| ||||||||||  ||||| ||||||||| |||||||||||||    
T  14852074 atcagaattaaaggcttaagaagattgaatgttagtccaacccttaccttaa 14852023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 23802460 - 23802406
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||||| | ||||||||||  ||||| |||||||| |||||||||||||    
T  23802460 aattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 23802406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 22354671 - 22354720
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  22354671 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 22354720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 32306191 - 32306151
Alignment:
Q  342 aggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  32306191 aggcttaagaagattgaatgttagtcccacccttaccttaa 32306151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 10332 - 10387
Alignment:
Q  326 caattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  10332 caattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 10387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 1070 - 1125
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  1070 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 28746 - 28695
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||| ||||||||||  ||||| |||||||||||||||||||||||    
T  28746 atcagaattaaaggcttaagaagattgaatgttagtcccacccttaccttaa 28695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 17460262 - 17460207
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  17460262 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 17460207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 22245291 - 22245237
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  22245291 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 22245237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 22252369 - 22252315
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  22252369 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 22252315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 1326501 - 1326437
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||||| | || || ||||  ||||| ||||||||||||||||||||||||||||||    
T  1326501 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaa 1326437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 19936290 - 19936239
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||||| ||||| |||||||| || ||||| ||||||||||||||    
T  19936290 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttaa 19936239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 20501280 - 20501229
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  20501280 atcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 20501229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 14396960 - 14396910
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  14396960 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 14396910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 22385131 - 22385077
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||||| | ||||||||||  ||||| ||||||||||||| ||||||||    
T  22385131 aattatcagaatcataggcttaagaagattgaatgttagtcccaccattacctta 22385077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 28398490 - 28398540
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||| | |||||||||| |||||| |||||||| |||||||||||||    
T  28398490 atcagaatcataggcttaagaaaattgaatgttagtctcacccttacctta 28398540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 22418637 - 22418588
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctt 380  Q
    ||||||||||   ||||||||||||||| |||||||| ||||||||||||    
T  22418637 atcagaattatcagcttaagagaattgaatgttagtctcacccttacctt 22418588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 386
Target Start/End: Complemental strand, 45289797 - 45289756
Alignment:
Q  345 cttaagagaattgattgttagtcccacccttaccttaacaat 386  Q
    |||||||  ||||| |||||||||||||||||||||||||||    
T  45289797 cttaagattattgaatgttagtcccacccttaccttaacaat 45289756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 25483491 - 25483439
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttaccttaaca 384  Q
    ||||||| | ||||||||||  ||||| ||||||||||||||||| |||||||    
T  25483491 tcagaatcataggcttaagaagattgaatgttagtcccacccttaacttaaca 25483439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 191852 - 191798
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||||| | ||||||||||  ||||| ||||||||||||||||||||||    
T  191852 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 191798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 447415 - 447469
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||| | ||||||||||  ||||| ||||||||||||||||||||||||||    
T  447415 atcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaacaa 447469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 72427 - 72484
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaaca 384  Q
    ||||||||||||   ||||||||||  ||||| |||||||||||||||||||||||||    
T  72427 aattatcagaatcgtaggcttaagaagattgaatgttagtcccacccttaccttaaca 72484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 3606 - 3670
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||||| | || || ||||  ||||| ||||||||||||||||||||||||||||||    
T  3606 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaa 3670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 34282 - 34346
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||||| | || || ||||  ||||| ||||||||||||||||||||||||||||||    
T  34282 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaa 34346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 209 - 260
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||| ||||||||||  ||||| |||||||| ||||||||||||||    
T  209 atcagaattaaaggcttaagaagattgaatgttagtcgcacccttaccttaa 260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 2082 - 2027
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||||||| | | ||||||||  ||||| |||||||||||||||||||||||    
T  2082 aattatcagaatcataagcttaagaagattgaatgttagtcccacccttaccttaa 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 1101 - 1050
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  1101 atcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 1050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 13602 - 13551
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||  |||||||||  ||||| |||||||||||||||||||||||    
T  13602 atcagaattaacggcttaagaagattgaatgttagtcccacccttaccttaa 13551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 220384 - 220333
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  220384 atcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 220333  T

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Target: scaffold0914 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 2646 - 2700
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||||| || |||||||  ||||| |||||||| |||||||||||||||||    
T  2646 atcagaattatagacttaagaagattgaatgttagtctcacccttaccttaacaa 2700  T

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Target: scaffold0347 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 9803 - 9857
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaa 385  Q
    |||||||| | ||||||||||  ||||| |||||||| |||||||||||||||||    
T  9803 atcagaatcataggcttaagaagattgaatgttagtctcacccttaccttaacaa 9857  T

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Target: scaffold0200 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 18596 - 18646
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  18596 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 18646  T

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Target: scaffold0145 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 10739 - 10789
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||  |||||||||  ||||| ||||||||||||||||||||||    
T  10739 atcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 10789  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 7780 - 7726
Alignment:
Q  335 gaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||| |||||||||| |||||||   ||||||| |||||||||||||||||||||    
T  7780 gaatcacaggcttaatagaattgcaagttagtctcacccttaccttaacaatgaa 7726  T

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Target: scaffold0117 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 42674 - 42724
Alignment:
Q  332 tcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  42674 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaa 42724  T

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Target: scaffold0117; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 40258 - 40218
Alignment:
Q  342 aggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  40258 aggcttaagaagattgaatgttagtcccacccttaccttaa 40218  T

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Target: scaffold0114 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 46292 - 46242
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  46292 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 46242  T

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Target: scaffold0081 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 4041 - 4003
Alignment:
Q  344 gcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  4041 gcttaagagaattgaatgttagtctcacccttaccttaa 4003  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 81192 - 81242
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    ||||||||||||| ||||| |||||||| || ||||| |||||||||||||    
T  81192 atcagaattacagccttaatagaattgaatgctagtctcacccttacctta 81242  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 333239 - 333289
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctta 381  Q
    |||||||||| || ||||||| |||||| |||||||| |||||||||||||    
T  333239 atcagaattatagacttaagaaaattgaatgttagtctcacccttacctta 333289  T

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Target: scaffold0494 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 92 - 35
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    |||||| ||||||| |||| || ||||  ||||| |||||||||||||||||||||||    
T  92 acaattttcagaatcacagactcaagattattgaatgttagtcccacccttaccttaa 35  T

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Target: scaffold0162 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 25531 - 25474
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaa 382  Q
    ||||| ||||||||||||| ||||| |||||||   ||||||| ||||||||||||||    
T  25531 acaatcatcagaattacagacttaatagaattgtaagttagtctcacccttaccttaa 25474  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 376
Target Start/End: Original strand, 14258 - 14307
Alignment:
Q  327 aattatcagaattacaggcttaagagaattgattgttagtcccaccctta 376  Q
    |||||||||||| | ||||||||||  ||||| |||||||||||||||||    
T  14258 aattatcagaatcataggcttaagaagattgaatgttagtcccaccctta 14307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 7211 - 7260
Alignment:
Q  331 atcagaattacaggcttaagagaattgattgttagtcccacccttacctt 380  Q
    |||||||| | ||||||||||  ||||| |||||||||||||||||||||    
T  7211 atcagaatcataggcttaagaagattgaatgttagtcccacccttacctt 7260  T

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Target: scaffold0535 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 7570 - 7634
Alignment:
Q  325 acaattatcagaattacaggcttaagagaattgattgttagtcccacccttaccttaacaatgaa 389  Q
    |||||| ||||||| | || || ||||  ||||| |||||||| |||||||||||||||||||||    
T  7570 acaattctcagaatcatagactcaagattattgaatgttagtctcacccttaccttaacaatgaa 7634  T

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Target: scaffold0500 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 317
Target Start/End: Original strand, 8336 - 8368
Alignment:
Q  285 tcacttttaacctaattctccaattctcaaaaa 317  Q
    |||||||||||||||||||| ||||||||||||    
T  8336 tcacttttaacctaattctcaaattctcaaaaa 8368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 118864 - 118828
Alignment:
Q  285 tcacttttaacctaattctccaattctcaaaaataaa 321  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  118864 tcacttttaacctagttctccaattctcaaaactaaa 118828  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 163666 - 163630
Alignment:
Q  285 tcacttttaacctaattctccaattctcaaaaataaa 321  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  163666 tcacttttaacctaattcttcaattctcaaaactaaa 163630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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