View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8324_high_4 (Length: 450)
Name: NF8324_high_4
Description: NF8324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8324_high_4 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 15 - 420
Target Start/End: Complemental strand, 3916146 - 3915727
Alignment:
| Q |
15 |
atgaacaaaaatagtaaagttaaaggtnnnnnnngtgaagcaaatattatctatcctacaaagctatgtagagaaaatacatttagagtcacgaaatcca |
114 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3916146 |
atgaacaaaaatagtaaagttaaaggtaaaaaaagtgaagcaaatattatctatcctacaaagctatgtagagaaaataaatttagagtcacgaaatcca |
3916047 |
T |
 |
| Q |
115 |
aacatcaagctttttggtcatccatatctataactatattcccgaactcttcggtcatcaatttcgatatgttggatatgagccaccttgcgccagtagt |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
3916046 |
aacatcaagctttttggtcatccatatctataactatattcccgaactcttcggtcatcaatttcgatatgttggatatgagccaccttgcgccagtact |
3915947 |
T |
 |
| Q |
215 |
ttcctgtcttgg---gatcaagtcttggaataaaaaatgggcattccttgata-----------tagagtggaaggaagcccctgttcaggcaagtaccg |
300 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || | |
|
|
| T |
3915946 |
ttcctgtcttgggccgatcaagtcttggaataaaaaatgggcattccttgatatagagttgatttagagtggaaggaagcccctgttcaggcaagcactg |
3915847 |
T |
 |
| Q |
301 |
cagcacgtcgcaacaagtgtacgaagagcattcagctgttgaaaccccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatga |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3915846 |
cagcacgtcgcaacaagtgtacgaagagcattcagctgttgaaaccccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatga |
3915747 |
T |
 |
| Q |
401 |
tgtttttgggaagtagattc |
420 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
3915746 |
tgtttttgggaagtagattc |
3915727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 168 - 433
Target Start/End: Original strand, 52651341 - 52651627
Alignment:
| Q |
168 |
gtcatcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgtcttgggatcaagtcttggaataaaaaatgggcattccttgatatag |
267 |
Q |
| |
|
|||||||||||| ||||| | ||||||||||||||||||||||| |||||| ||||||| | |||||||||| | || | |||||| ||| |||||||| |
|
|
| T |
52651341 |
gtcatcaatttctatatgaggaatatgagccaccttgcgccagtactttcctttcttgggtttaagtcttggagtcaacattgggcactccctgatatag |
52651440 |
T |
 |
| Q |
268 |
agt-----------ggaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaac----------aagtgtacgaagagcattcagctgttgaaacc |
346 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||||| || |||||||| | |
|
|
| T |
52651441 |
tgctgatttagggaggaaggaaacccctgttcaggcaagtaccgcagcacgtcacaacgatcaattgtaagtgtgcgaagagcattaagttgttgaaagc |
52651540 |
T |
 |
| Q |
347 |
ccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatgatgtttttgggaagtagattctccactggaaatg |
433 |
Q |
| |
|
||||||| |||||||||||||||||||| || ||||||||| | |||| ||| |||||| ||||||| ||||| ||| ||||||||| |
|
|
| T |
52651541 |
ccttgtcgtccagctttttgagactctttaaattgctgatgtgtagagagataatgtttctgggaagaagattttcctctggaaatg |
52651627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 122 - 433
Target Start/End: Original strand, 16035451 - 16035782
Alignment:
| Q |
122 |
agctttttggtcatccatatctataactatattcccgaactcttcggtcatcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgt |
221 |
Q |
| |
|
||||||||| |||| |||||||||| | ||||| |||||| ||| |||||||| ||||||| |||||||||||||||| ||||||| |||||||| |
|
|
| T |
16035451 |
agctttttgctcattaatatctataagaaggttcccaaactctcttgtcttcaatttctatatgttagatatgagccaccttgtgccagtactttcctgt |
16035550 |
T |
 |
| Q |
222 |
cttgggatcaagtcttggaataaaaaatgggcattccttgata-----------tagagtggaaggaagcccctgttcaggcaagtaccgcagcacgtcg |
310 |
Q |
| |
|
|||||| |||||||||||| | || | |||||||||| ||||| ||| | ||||||||||||||||| || |||||||||| ||||||| |
|
|
| T |
16035551 |
cttgggttcaagtcttggagtcaacattgggcattccctgatacatagctgatttagggaagaaggaagcccctgttctggaaagtaccgcaacacgtcg |
16035650 |
T |
 |
| Q |
311 |
caa-----------caagtgtacgaagagcattcagctgttgaaaccccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatg |
399 |
Q |
| |
|
||| ||||||||||||||||||| || |||||||||||||| || || ||||||||||||||||| ||||||||||| | |||| ||| |
|
|
| T |
16035651 |
caacgattaattttcaagtgtacgaagagcattaagttgttgaaaccccttttcgtcgagctttttgagactcttaaatttgctgat--gtagagagata |
16035748 |
T |
 |
| Q |
400 |
atgtttttgggaagtagattctccactggaaatg |
433 |
Q |
| |
|
| ||| |||||||||| |||||| ||||||||| |
|
|
| T |
16035749 |
ttctttctgggaagtaggttctcctctggaaatg |
16035782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 172 - 433
Target Start/End: Original strand, 16061608 - 16061888
Alignment:
| Q |
172 |
tcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgtcttgggatcaagtcttggaataaaaaatgggcattccttgata------- |
264 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||||| | || | |||||||||| ||||| |
|
|
| T |
16061608 |
tcaatttctatatgttgaatatgagccaccttgtgccagtactttcctgtcttgggttcaagtcttggagtcaacattgggcattccctgatacatagct |
16061707 |
T |
 |
| Q |
265 |
----tagagtggaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaa-----------caagtgtacgaagagcattcagctgttgaaacccct |
349 |
Q |
| |
|
||| | ||||||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||| | |
|
|
| T |
16061708 |
gatttagggaagaaggaagcccttgttctggcaagtaccgcaacacgtcgcaataattaattttcaagtgtacgaagagcattaagttgttgaaacccat |
16061807 |
T |
 |
| Q |
350 |
tgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatgatgtttttgggaagtagattctccactggaaatg |
433 |
Q |
| |
|
| || ||||||||||| |||||||| ||||||||||| |||| ||| |||||| | |||||||| |||||| ||||||||| |
|
|
| T |
16061808 |
tttcgtccagctttttaagactcttaaatttgctgat---tagagagataatgtttctaggaagtaggttctcctctggaaatg |
16061888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 433
Target Start/End: Original strand, 31682480 - 31682766
Alignment:
| Q |
168 |
gtcatcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgtcttgggatcaagtcttggaataaaaaatgggcattccttgatatag |
267 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||| |||||| |||||||||| ||| | |||||||||| | || | |||||| ||| |||||| | |
|
|
| T |
31682480 |
gtcatcaatttctatatgaggaatatgagccaccttgcaccagtactttcctgtctcgggtttaagtcttggagtcaacactgggcaatccctgatattg |
31682579 |
T |
 |
| Q |
268 |
agt-----------ggaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaac----------aagtgtacgaagagcattcagctgttgaaacc |
346 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||| |||||||||| |||||| | ||||||||| || |||||||| | |
|
|
| T |
31682580 |
agctgatttagggaggaaggaagcccctgttcaggcaagtactgcagaacgtcgcaacgatcaattttaagtgtgcaaagagcattaagttgttgaaagc |
31682679 |
T |
 |
| Q |
347 |
ccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatgatgtttttgggaagtagattctccactggaaatg |
433 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||||||| | |||| ||| |||||| ||||||| ||||| ||| ||||||||| |
|
|
| T |
31682680 |
ccttgtcgtccagcttcttgagactctttaaattgctgatgtgtagagagataatgtttctgggaagaagattttcctctggaaatg |
31682766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 433
Target Start/End: Complemental strand, 31895952 - 31895666
Alignment:
| Q |
168 |
gtcatcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgtcttgggatcaagtcttggaataaaaaatgggcattccttgatatag |
267 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||| |||||| |||||||||| ||| | |||||||||| | || | |||||| ||| |||||| | |
|
|
| T |
31895952 |
gtcatcaatttctatatgaggaatatgagccaccttgcaccagtactttcctgtctcgggtttaagtcttggagtcaacactgggcaatccctgatattg |
31895853 |
T |
 |
| Q |
268 |
agt-----------ggaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaac----------aagtgtacgaagagcattcagctgttgaaacc |
346 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||| |||||||||| |||||| | ||||||||| || |||||||| | |
|
|
| T |
31895852 |
agctgatttagggaggaaggaagcccctgttcaggcaagtactgcagaacgtcgcaacgatcaattttaagtgtgcaaagagcattaagttgttgaaagc |
31895753 |
T |
 |
| Q |
347 |
ccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatgatgtttttgggaagtagattctccactggaaatg |
433 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||||||| | |||| ||| |||||| ||||||| ||||| ||| ||||||||| |
|
|
| T |
31895752 |
ccttgtcgtccagcttcttgagactctttaaattgctgatgtgtagagagataatgtttctgggaagaagattttcctctggaaatg |
31895666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 433
Target Start/End: Complemental strand, 31900536 - 31900250
Alignment:
| Q |
168 |
gtcatcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgtcttgggatcaagtcttggaataaaaaatgggcattccttgatatag |
267 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||| |||||| |||||||||| ||| | |||||||||| | || | |||||| ||| |||||| | |
|
|
| T |
31900536 |
gtcatcaatttctatatgaggaatatgagccaccttgcaccagtactttcctgtctcgggtttaagtcttggagtcaacactgggcaatccctgatattg |
31900437 |
T |
 |
| Q |
268 |
agt-----------ggaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaac----------aagtgtacgaagagcattcagctgttgaaacc |
346 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||| |||||||||| |||||| | ||||||||| || |||||||| | |
|
|
| T |
31900436 |
agctgatttagggaggaaggaagcccctgttcaggcaagtactgcagaacgtcgcaacgatcaattttaagtgtgcaaagagcattaagttgttgaaagc |
31900337 |
T |
 |
| Q |
347 |
ccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatgatgtttttgggaagtagattctccactggaaatg |
433 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||||||| | |||| ||| |||||| ||||||| ||||| ||| ||||||||| |
|
|
| T |
31900336 |
ccttgtcgtccagcttcttgagactctttaaattgctgatgtgtagagagataatgtttctgggaagaagattttcctctggaaatg |
31900250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 433
Target Start/End: Complemental strand, 31916245 - 31915959
Alignment:
| Q |
168 |
gtcatcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgtcttgggatcaagtcttggaataaaaaatgggcattccttgatatag |
267 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||| |||||| |||||||||| ||| | |||||||||| | || | |||||| ||| |||||| | |
|
|
| T |
31916245 |
gtcatcaatttctatatgaggaatatgagccaccttgcaccagtactttcctgtctcgggtttaagtcttggagtcaacactgggcaatccctgatattg |
31916146 |
T |
 |
| Q |
268 |
agt-----------ggaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaac----------aagtgtacgaagagcattcagctgttgaaacc |
346 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||| |||||||||| |||||| | ||||||||| || |||||||| | |
|
|
| T |
31916145 |
agctgatttagggaggaaggaagcccctgttcaggcaagtactgcagaacgtcgcaacgatcaattttaagtgtgcaaagagcattaagttgttgaaagc |
31916046 |
T |
 |
| Q |
347 |
ccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatgatgtttttgggaagtagattctccactggaaatg |
433 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||||||| | |||| ||| |||||| ||||||| ||||| ||| ||||||||| |
|
|
| T |
31916045 |
ccttgtcgtccagcttcttgagactctttaaattgctgatgtgtagagagataatgtttctgggaagaagattttcctctggaaatg |
31915959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 168 - 433
Target Start/End: Complemental strand, 31949893 - 31949607
Alignment:
| Q |
168 |
gtcatcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgtcttgggatcaagtcttggaataaaaaatgggcattccttgatatag |
267 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||| |||||| |||||||||| ||| | |||||||||| | || | |||||| ||| |||||| | |
|
|
| T |
31949893 |
gtcatcaatttctatatgaggaatatgagccaccttgcaccagtactttcctgtctcgggtttaagtcttggagtcaacactgggcaatccctgatattg |
31949794 |
T |
 |
| Q |
268 |
agt-----------ggaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaac----------aagtgtacgaagagcattcagctgttgaaacc |
346 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||| |||||||||| |||||| | ||||||||| || |||||||| | |
|
|
| T |
31949793 |
agctgatttagggaggaaggaagcccctgttcaggcaagtactgcagaacgtcgcaacgatcaattttaagtgtgcaaagagcattaagttgttgaaagc |
31949694 |
T |
 |
| Q |
347 |
ccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatgatgtttttgggaagtagattctccactggaaatg |
433 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||||||| | |||| ||| |||||| ||||||| ||||| ||| ||||||||| |
|
|
| T |
31949693 |
ccttgtcgtccagcttcttgagactctttaaattgctgatgtgtagagagataatgtttctgggaagaagattttcctctggaaatg |
31949607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 433
Target Start/End: Original strand, 16052207 - 16052538
Alignment:
| Q |
122 |
agctttttggtcatccatatctataactatattcccgaactcttcggtcatcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgt |
221 |
Q |
| |
|
||||||||| |||| |||||||||| | ||||| |||||| ||| |||||||| ||||||||||||||| |||||||| ||||||| |||| | | |
|
|
| T |
16052207 |
agctttttgctcattaatatctataagaaggttcccaaactctcttgtcttcaatttctatatgttggatatgatccaccttgtgccagtactttcgttt |
16052306 |
T |
 |
| Q |
222 |
cttgggatcaagtcttggaataaaaaatgggcattccttgata-----------tagagtggaaggaagcccctgttcaggcaagtaccgcagcacgtcg |
310 |
Q |
| |
|
||| || |||||||||||| | || | |||||||||| ||||| ||| | ||||||||||||||||| || |||||||||| ||||||| |
|
|
| T |
16052307 |
cttaggttcaagtcttggagtcaacattgggcattccctgatacatagctgatttagggaagaaggaagcccctgttctggaaagtaccgcaacacgtcg |
16052406 |
T |
 |
| Q |
311 |
caac-----------aagtgtacgaagagcattcagctgttgaaaccccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatg |
399 |
Q |
| |
|
|||| |||||||||||||||||| || ||||||||||||| || |||||||||||||||||||| ||||||||||| | |||| ||| |
|
|
| T |
16052407 |
caacgattaattttcaagtgtacgaagagcattaagtcgttgaaaccccttttcgtccagctttttgagactcttaaatttgctgat--gtagagagata |
16052504 |
T |
 |
| Q |
400 |
atgtttttgggaagtagattctccactggaaatg |
433 |
Q |
| |
|
||||| |||||||||| |||||| || |||||| |
|
|
| T |
16052505 |
ttgtttctgggaagtaggttctcctctagaaatg |
16052538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 387
Target Start/End: Original strand, 16046093 - 16046330
Alignment:
| Q |
172 |
tcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgtcttgggatcaagtcttggaataaaaaatgggcattccttgata------- |
264 |
Q |
| |
|
|||||||| ||||||| ||||||||||| |||| ||||||| |||||||||||||| |||||||||||| | || |||||||||| ||||| |
|
|
| T |
16046093 |
tcaatttctatatgttagatatgagccatcttgtgccagtactttcctgtcttgggttcaagtcttggagtcaactttgggcattccctgatacatagct |
16046192 |
T |
 |
| Q |
265 |
----tagagtggaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaac-----------aagtgtacgaagagcattcagctgttgaaacccct |
349 |
Q |
| |
|
||| | ||||||||||||||||| || ||||||| || ||||||||||| |||||||||||||||||| || ||||||||||||| |
|
|
| T |
16046193 |
gatttagggaagaaggaagcccctgttctggaaagtacctcaacacgtcgcaacgattaattttcaagtgtacgaagagcattaagttgttgaaacccct |
16046292 |
T |
 |
| Q |
350 |
tgtcatccagctttttgagactcttcaatttgctgatg |
387 |
Q |
| |
|
| || || ||||||||||||||||| |||||||||||| |
|
|
| T |
16046293 |
tttcgtctagctttttgagactcttaaatttgctgatg |
16046330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 172 - 432
Target Start/End: Original strand, 16057462 - 16057742
Alignment:
| Q |
172 |
tcaatttcgatatgttggatatgagccaccttgcgccagtagtttcctgtcttgggatcaagtcttggaataaaaaatgggcattccttgata------- |
264 |
Q |
| |
|
|||||||| |||||||| |||| |||||||||| |||| || ||||| ||||||| |||||||||||| | || | |||||||||| ||||| |
|
|
| T |
16057462 |
tcaatttctatatgttgaatataagccaccttgagccaatacattcctatcttgggttcaagtcttggagtcaacattgggcattccctgatacatagct |
16057561 |
T |
 |
| Q |
265 |
----tagagtggaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaac-----------aagtgtacgaagagcattcagctgttgaaacccct |
349 |
Q |
| |
|
||| | |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| || ||||||||||||| |
|
|
| T |
16057562 |
gatttagggaagaaggaagcccctgttttggcaagtaccgcaacacgtcgcaacgattaattttcaagtgtacgaagagcattaagttgttgaaacccct |
16057661 |
T |
 |
| Q |
350 |
tgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatgatgtttttgggaagtagattctccactggaaat |
432 |
Q |
| |
|
|| |||||||||| || |||||| |||||||||||| | ||| ||| |||||| ||||||||| |||||| |||||||| |
|
|
| T |
16057662 |
cttcgtccagcttttagatactcttaaatttgctgatgtg--gagagataatgtttcagggaagtaggttctcctctggaaat |
16057742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 432
Target Start/End: Original strand, 16039744 - 16039860
Alignment:
| Q |
314 |
caagtgtacgaagagcattcagctgttgaaaccccttgtcatccagctttttgagactcttcaatttgctgatgcgcagagtgatgatgtttttgggaag |
413 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||| || ||||||||||||| |||||| |||||||||||| | ||| ||| |||||| ||| || |
|
|
| T |
16039744 |
caagtgtacgaagagcattaagttgttgaaacccctcttcgtccagctttttgatactcttaaatttgctgatgtg--gagagataatgtttcaggggag |
16039841 |
T |
 |
| Q |
414 |
tagattctccactggaaat |
432 |
Q |
| |
|
||| |||||| |||||||| |
|
|
| T |
16039842 |
taggttctcctctggaaat |
16039860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 16039662 - 16039704
Alignment:
| Q |
272 |
gaaggaagcccctgttcaggcaagtaccgcagcacgtcgcaac |
314 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| ||||||||||| |
|
|
| T |
16039662 |
gaaggaagcccctattctggcaagtaccgcaacacgtcgcaac |
16039704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University