View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8325_high_18 (Length: 220)

Name: NF8325_high_18
Description: NF8325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8325_high_18
NF8325_high_18
[»] chr3 (44 HSPs)
chr3 (33-208)||(54725932-54726107)
chr3 (1-89)||(54726115-54726199)
chr3 (31-89)||(1043903-1043961)
chr3 (31-89)||(34935534-34935592)
chr3 (31-88)||(22995782-22995839)
chr3 (1-90)||(22528912-22528997)
chr3 (31-82)||(43898096-43898147)
chr3 (31-89)||(1044009-1044067)
chr3 (31-89)||(19678958-19679016)
chr3 (31-89)||(32998554-32998612)
chr3 (8-85)||(5326811-5326888)
chr3 (33-89)||(12569190-12569246)
chr3 (33-89)||(13545654-13545710)
chr3 (31-83)||(22528854-22528906)
chr3 (31-83)||(42595823-42595875)
chr3 (1-79)||(52638040-52638113)
chr3 (31-89)||(50623122-50623180)
chr3 (31-69)||(52638119-52638157)
chr3 (41-89)||(28906716-28906765)
chr3 (32-85)||(49562035-49562088)
chr3 (31-83)||(26043252-26043304)
chr3 (35-90)||(7933608-7933663)
chr3 (31-90)||(24599965-24600024)
chr3 (31-89)||(25995628-25995686)
chr3 (31-85)||(32589315-32589369)
chr3 (31-82)||(43333922-43333973)
chr3 (34-89)||(46151018-46151073)
chr3 (31-89)||(7672689-7672747)
chr3 (31-89)||(17004954-17005012)
chr3 (31-89)||(17940184-17940242)
chr3 (31-89)||(19679048-19679106)
chr3 (12-83)||(29076527-29076594)
chr3 (31-89)||(34205559-34205617)
chr3 (31-89)||(46739303-46739361)
chr3 (31-89)||(51256563-51256621)
chr3 (1-83)||(18480936-18481014)
chr3 (1-89)||(42595724-42595817)
chr3 (33-82)||(51256655-51256704)
chr3 (33-89)||(5790645-5790701)
chr3 (31-83)||(7672779-7672831)
chr3 (33-89)||(8126126-8126182)
chr3 (8-73)||(8126197-8126258)
chr3 (31-83)||(32146466-32146518)
chr3 (31-82)||(51486429-51486480)
[»] chr6 (29 HSPs)
chr6 (33-211)||(5301791-5301969)
chr6 (1-89)||(5301977-5302065)
chr6 (31-89)||(27082376-27082434)
chr6 (31-89)||(2033165-2033223)
chr6 (31-89)||(2033255-2033313)
chr6 (31-91)||(19687553-19687613)
chr6 (33-80)||(11400800-11400847)
chr6 (32-82)||(17181378-17181428)
chr6 (31-89)||(17854832-17854890)
chr6 (37-83)||(18685209-18685255)
chr6 (41-82)||(256085-256126)
chr6 (1-86)||(3212240-3212321)
chr6 (1-82)||(7418878-7418955)
chr6 (5-86)||(15467637-15467714)
chr6 (31-91)||(32786202-32786262)
chr6 (34-85)||(1858277-1858328)
chr6 (5-89)||(10731537-10731617)
chr6 (31-90)||(11989228-11989287)
chr6 (31-89)||(256165-256223)
chr6 (31-89)||(2693748-2693806)
chr6 (33-90)||(3418844-3418901)
chr6 (31-89)||(7246880-7246937)
chr6 (1-70)||(29168495-29168565)
chr6 (31-89)||(31577525-31577583)
chr6 (33-78)||(31577446-31577491)
chr6 (31-90)||(5433417-5433476)
chr6 (31-70)||(6047970-6048010)
chr6 (31-79)||(19687473-19687521)
chr6 (31-90)||(29938345-29938404)
[»] chr5 (66 HSPs)
chr5 (4-89)||(9005010-9005091)
chr5 (37-89)||(17096439-17096491)
chr5 (33-83)||(11773458-11773508)
chr5 (31-89)||(20361973-20362031)
chr5 (31-87)||(3161312-3161368)
chr5 (31-89)||(12165279-12165338)
chr5 (31-89)||(14571004-14571062)
chr5 (3-79)||(22565601-22565674)
chr5 (31-81)||(22565682-22565732)
chr5 (31-88)||(9004944-9005001)
chr5 (33-89)||(6638226-6638282)
chr5 (37-89)||(7164839-7164891)
chr5 (33-73)||(14642104-14642144)
chr5 (31-82)||(14416409-14416460)
chr5 (33-72)||(30778013-30778052)
chr5 (38-89)||(30778093-30778144)
chr5 (1-89)||(35172426-35172510)
chr5 (31-90)||(35245694-35245753)
chr5 (31-89)||(14064806-14064864)
chr5 (31-89)||(23042048-23042106)
chr5 (31-89)||(29112280-29112338)
chr5 (31-89)||(34102161-34102219)
chr5 (31-89)||(43585491-43585549)
chr5 (31-80)||(1723329-1723378)
chr5 (33-78)||(11773544-11773589)
chr5 (1-83)||(14064870-14064948)
chr5 (1-83)||(15966016-15966094)
chr5 (1-82)||(7336915-7336992)
chr5 (5-82)||(7581449-7581522)
chr5 (31-83)||(12442851-12442903)
chr5 (31-79)||(16985331-16985379)
chr5 (41-89)||(16985394-16985442)
chr5 (31-79)||(22584318-22584366)
chr5 (1-90)||(26168248-26168333)
chr5 (31-79)||(29807084-29807132)
chr5 (33-89)||(29807164-29807220)
chr5 (35-90)||(10832374-10832429)
chr5 (31-78)||(14642023-14642070)
chr5 (34-89)||(29255740-29255795)
chr5 (31-90)||(34186441-34186500)
chr5 (1-89)||(37039752-37039836)
chr5 (31-82)||(43585581-43585632)
chr5 (31-89)||(13420520-13420578)
chr5 (31-89)||(18942072-18942130)
chr5 (31-89)||(19784530-19784588)
chr5 (31-89)||(19784609-19784667)
chr5 (31-89)||(20207157-20207215)
chr5 (31-89)||(24433621-24433679)
chr5 (31-89)||(29112361-29112419)
chr5 (31-89)||(32146823-32146881)
chr5 (31-89)||(33696741-33696799)
chr5 (31-89)||(34102071-34102129)
chr5 (33-79)||(35172518-35172564)
chr5 (31-89)||(35969037-35969095)
chr5 (31-73)||(39126100-39126142)
chr5 (33-82)||(7581388-7581437)
chr5 (31-80)||(20367313-20367362)
chr5 (31-76)||(35067928-35067973)
chr5 (34-83)||(36792724-36792773)
chr5 (33-82)||(39916373-39916422)
chr5 (33-82)||(43340503-43340552)
chr5 (31-83)||(9984923-9984975)
chr5 (31-83)||(15385896-15385948)
chr5 (31-83)||(15577553-15577605)
chr5 (31-79)||(20207237-20207285)
chr5 (31-91)||(35245585-35245645)
[»] chr2 (58 HSPs)
chr2 (1-89)||(37396200-37396284)
chr2 (31-89)||(9071201-9071259)
chr2 (1-83)||(4637067-4637145)
chr2 (33-82)||(40534445-40534494)
chr2 (33-89)||(9071293-9071349)
chr2 (1-89)||(4898161-4898245)
chr2 (1-89)||(4945555-4945639)
chr2 (1-89)||(32473467-32473551)
chr2 (31-82)||(40534675-40534726)
chr2 (31-89)||(15178010-15178068)
chr2 (37-89)||(4637003-4637055)
chr2 (31-83)||(5580252-5580304)
chr2 (31-86)||(2795396-2795451)
chr2 (36-83)||(9895212-9895259)
chr2 (1-89)||(10041538-10041622)
chr2 (1-89)||(10099548-10099632)
chr2 (31-90)||(25668406-25668465)
chr2 (31-82)||(28680925-28680976)
chr2 (31-82)||(32070547-32070598)
chr2 (31-90)||(34911184-34911243)
chr2 (1-89)||(37131732-37131816)
chr2 (31-78)||(37396290-37396337)
chr2 (31-82)||(38262071-38262122)
chr2 (31-90)||(42579105-42579164)
chr2 (31-89)||(324792-324850)
chr2 (31-89)||(8554667-8554725)
chr2 (31-89)||(9157970-9158028)
chr2 (31-89)||(37486085-37486143)
chr2 (33-82)||(18719304-18719353)
chr2 (1-83)||(20195291-20195369)
chr2 (31-83)||(5580336-5580388)
chr2 (31-83)||(9895268-9895320)
chr2 (31-90)||(32346072-32346132)
chr2 (31-83)||(45095518-45095569)
chr2 (31-89)||(15178087-15178148)
chr2 (31-89)||(29573810-29573868)
chr2 (31-82)||(36490565-36490616)
chr2 (49-83)||(18719366-18719400)
chr2 (31-89)||(24971201-24971259)
chr2 (31-89)||(25668497-25668555)
chr2 (31-89)||(26567632-26567690)
chr2 (35-89)||(26567726-26567780)
chr2 (35-81)||(31211739-31211785)
chr2 (31-89)||(31211799-31211856)
chr2 (31-89)||(40340555-40340613)
chr2 (31-89)||(40669049-40669107)
chr2 (35-89)||(45123791-45123845)
chr2 (33-90)||(604852-604909)
chr2 (3-89)||(19822374-19822456)
chr2 (3-89)||(19842595-19842677)
chr2 (31-90)||(4898251-4898310)
chr2 (31-90)||(4945645-4945704)
chr2 (1-82)||(5144271-5144348)
chr2 (37-89)||(26269289-26269341)
chr2 (33-89)||(26269381-26269437)
chr2 (31-83)||(40739494-40739546)
chr2 (1-89)||(42230518-42230602)
chr2 (33-89)||(45123883-45123939)
[»] chr4 (64 HSPs)
chr4 (31-89)||(40952535-40952593)
chr4 (30-85)||(48902044-48902099)
chr4 (33-89)||(24275213-24275269)
chr4 (1-89)||(54786978-54787062)
chr4 (31-89)||(21003936-21003994)
chr4 (31-89)||(23599865-23599923)
chr4 (31-89)||(54787068-54787126)
chr4 (37-90)||(20541185-20541238)
chr4 (33-89)||(40952627-40952683)
chr4 (31-89)||(46779380-46779438)
chr4 (31-89)||(50038446-50038504)
chr4 (31-89)||(50045668-50045726)
chr4 (1-83)||(20542805-20542883)
chr4 (31-83)||(22624478-22624530)
chr4 (31-78)||(23599786-23599833)
chr4 (31-82)||(34827558-34827609)
chr4 (32-83)||(55501289-55501340)
chr4 (31-90)||(56420517-56420576)
chr4 (31-89)||(9968297-9968355)
chr4 (31-89)||(21004026-21004084)
chr4 (31-89)||(39754095-39754153)
chr4 (31-89)||(39754185-39754243)
chr4 (31-89)||(44496804-44496862)
chr4 (31-89)||(44639832-44639890)
chr4 (31-89)||(51126101-51126159)
chr4 (31-81)||(51834617-51834667)
chr4 (33-90)||(9968418-9968475)
chr4 (33-82)||(24331428-24331477)
chr4 (1-83)||(26206596-26206674)
chr4 (31-84)||(26676968-26677021)
chr4 (33-89)||(38224025-38224081)
chr4 (31-83)||(15133920-15133972)
chr4 (31-91)||(23754278-23754338)
chr4 (31-79)||(44639752-44639800)
chr4 (35-70)||(22624438-22624473)
chr4 (31-82)||(30016959-30017010)
chr4 (31-82)||(41788924-41788975)
chr4 (31-82)||(42013149-42013200)
chr4 (52-91)||(48902105-48902144)
chr4 (31-82)||(50038536-50038587)
chr4 (31-82)||(50045758-50045809)
chr4 (31-89)||(55229544-55229602)
chr4 (31-73)||(17659551-17659593)
chr4 (31-89)||(20542889-20542947)
chr4 (31-89)||(24275303-24275361)
chr4 (31-89)||(25856096-25856154)
chr4 (32-74)||(27080055-27080096)
chr4 (31-89)||(34709571-34709629)
chr4 (35-89)||(38938109-38938162)
chr4 (31-89)||(43635832-43635890)
chr4 (35-89)||(48079606-48079660)
chr4 (31-89)||(51975210-51975268)
chr4 (31-89)||(53508496-53508554)
chr4 (31-89)||(56420427-56420485)
chr4 (1-79)||(5048441-5048515)
chr4 (31-91)||(24156133-24156193)
chr4 (37-89)||(44495686-44495738)
chr4 (31-79)||(49573885-49573933)
chr4 (35-83)||(23710837-23710885)
chr4 (33-89)||(34827469-34827524)
chr4 (31-79)||(37306938-37306986)
chr4 (1-53)||(43964994-43965046)
chr4 (33-89)||(55616903-55616958)
chr4 (33-89)||(55624207-55624262)
[»] scaffold0756 (2 HSPs)
scaffold0756 (1-89)||(3514-3598)
scaffold0756 (31-89)||(3604-3662)
[»] chr8 (31 HSPs)
chr8 (33-90)||(40962055-40962112)
chr8 (31-82)||(9303307-9303358)
chr8 (1-89)||(19293012-19293096)
chr8 (31-89)||(19293102-19293160)
chr8 (1-91)||(42631773-42631859)
chr8 (37-89)||(14053050-14053102)
chr8 (3-90)||(24726030-24726113)
chr8 (31-89)||(33934075-33934133)
chr8 (31-89)||(43484018-43484076)
chr8 (31-83)||(40716748-40716800)
chr8 (1-89)||(35201936-35202020)
chr8 (31-89)||(41178044-41178102)
chr8 (31-89)||(14052954-14053012)
chr8 (1-83)||(28464831-28464912)
chr8 (31-89)||(34194556-34194614)
chr8 (31-89)||(35063457-35063514)
chr8 (31-89)||(43483928-43483986)
chr8 (31-89)||(43844720-43844778)
chr8 (33-82)||(40962141-40962190)
chr8 (31-83)||(42631865-42631915)
chr8 (31-89)||(899242-899300)
chr8 (33-88)||(7256884-7256939)
chr8 (31-90)||(34194646-34194705)
chr8 (31-90)||(38883941-38884000)
chr8 (31-89)||(5419511-5419569)
chr8 (31-89)||(24726121-24726179)
chr8 (31-89)||(32480282-32480340)
chr8 (31-89)||(37922898-37922956)
chr8 (31-89)||(40802199-40802257)
chr8 (33-82)||(32484944-32484993)
chr8 (31-82)||(44838777-44838828)
[»] chr1 (52 HSPs)
chr1 (37-89)||(40960831-40960883)
chr1 (31-89)||(38190844-38190902)
chr1 (31-90)||(21909927-21909986)
chr1 (1-89)||(47011304-47011388)
chr1 (31-89)||(12030317-12030375)
chr1 (1-88)||(24478725-24478808)
chr1 (31-89)||(37255122-37255180)
chr1 (31-89)||(40328958-40329016)
chr1 (31-89)||(49979964-49980022)
chr1 (33-79)||(50144145-50144191)
chr1 (2-89)||(50144200-50144283)
chr1 (31-83)||(35049934-35049986)
chr1 (1-89)||(38847362-38847446)
chr1 (37-89)||(43384575-43384627)
chr1 (31-83)||(49979884-49979936)
chr1 (31-82)||(38190934-38190985)
chr1 (31-89)||(7230005-7230063)
chr1 (31-89)||(25378343-25378401)
chr1 (31-89)||(34061939-34061997)
chr1 (31-89)||(38824377-38824435)
chr1 (8-83)||(52253540-52253611)
chr1 (31-89)||(52253624-52253682)
chr1 (31-83)||(40328869-40328921)
chr1 (31-83)||(8751434-8751486)
chr1 (31-79)||(9380792-9380840)
chr1 (1-82)||(31909809-31909886)
chr1 (1-82)||(38824294-38824371)
chr1 (31-83)||(43020334-43020386)
chr1 (31-75)||(52879894-52879938)
chr1 (1-89)||(5852684-5852768)
chr1 (31-89)||(40341816-40341874)
chr1 (1-89)||(46518005-46518089)
chr1 (31-85)||(3141042-3141096)
chr1 (31-89)||(4838307-4838365)
chr1 (31-89)||(6763420-6763478)
chr1 (31-89)||(8751518-8751576)
chr1 (31-89)||(13219413-13219471)
chr1 (33-90)||(15013652-15013709)
chr1 (31-89)||(16426994-16427052)
chr1 (31-81)||(17988226-17988276)
chr1 (31-89)||(37255212-37255270)
chr1 (31-73)||(39181061-39181103)
chr1 (31-89)||(40341726-40341784)
chr1 (31-89)||(46812987-46813045)
chr1 (31-89)||(49363470-49363528)
chr1 (31-72)||(13219505-13219546)
chr1 (31-91)||(27146110-27146170)
chr1 (33-89)||(48376893-48376948)
chr1 (31-90)||(4974131-4974190)
chr1 (1-89)||(16426904-16426988)
chr1 (35-83)||(23392627-23392675)
chr1 (34-90)||(43020421-43020477)
[»] scaffold0542 (2 HSPs)
scaffold0542 (1-89)||(3474-3558)
scaffold0542 (31-89)||(3410-3468)
[»] chr7 (51 HSPs)
chr7 (1-89)||(31549853-31549937)
chr7 (1-89)||(39970153-39970237)
chr7 (31-82)||(40211155-40211206)
chr7 (31-89)||(32941863-32941921)
chr7 (31-83)||(1741882-1741934)
chr7 (37-89)||(3838211-3838263)
chr7 (37-89)||(40211244-40211296)
chr7 (31-83)||(45833276-45833328)
chr7 (2-89)||(3838115-3838198)
chr7 (31-89)||(5691562-5691620)
chr7 (31-89)||(31549789-31549847)
chr7 (31-89)||(46658728-46658786)
chr7 (31-89)||(46658818-46658876)
chr7 (1-83)||(3498296-3498374)
chr7 (8-91)||(32389148-32389228)
chr7 (31-83)||(41095194-41095246)
chr7 (33-77)||(47778437-47778481)
chr7 (31-82)||(20353060-20353111)
chr7 (1-89)||(28003238-28003322)
chr7 (31-90)||(37066268-37066327)
chr7 (31-89)||(7344984-7345042)
chr7 (31-89)||(20353163-20353221)
chr7 (31-89)||(32389241-32389299)
chr7 (31-69)||(47778515-47778553)
chr7 (31-89)||(48135462-48135520)
chr7 (33-89)||(16086290-16086346)
chr7 (31-79)||(43232951-43232999)
chr7 (31-83)||(45833192-45833244)
chr7 (31-83)||(46578351-46578403)
chr7 (31-82)||(13846713-13846764)
chr7 (31-82)||(18732216-18732266)
chr7 (31-82)||(27940748-27940799)
chr7 (31-82)||(36427753-36427804)
chr7 (31-89)||(37668007-37668065)
chr7 (31-90)||(46470947-46471006)
chr7 (35-90)||(46774605-46774660)
chr7 (31-89)||(3498380-3498438)
chr7 (31-89)||(24936677-24936735)
chr7 (35-89)||(28003174-28003228)
chr7 (31-73)||(33471502-33471544)
chr7 (31-89)||(33471576-33471634)
chr7 (31-89)||(36711535-36711593)
chr7 (31-89)||(39970243-39970301)
chr7 (31-84)||(19531954-19532007)
chr7 (1-83)||(46477135-46477213)
chr7 (1-83)||(48392868-48392946)
chr7 (30-82)||(1565497-1565549)
chr7 (57-89)||(25270609-25270641)
chr7 (33-89)||(31670996-31671052)
chr7 (31-83)||(33784062-33784114)
chr7 (31-83)||(38391903-38391955)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-89)||(17494-17578)
[»] scaffold0041 (1 HSPs)
scaffold0041 (31-83)||(108050-108102)
[»] scaffold0635 (1 HSPs)
scaffold0635 (1-89)||(5448-5532)
[»] scaffold0111 (4 HSPs)
scaffold0111 (31-89)||(38403-38461)
scaffold0111 (1-90)||(38002-38087)
scaffold0111 (33-89)||(38332-38388)
scaffold0111 (31-83)||(38093-38145)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-89)||(239-323)
[»] scaffold0047 (1 HSPs)
scaffold0047 (31-89)||(65916-65974)
[»] scaffold0287 (1 HSPs)
scaffold0287 (38-83)||(1837-1882)
[»] scaffold1786 (1 HSPs)
scaffold1786 (35-83)||(512-560)
[»] scaffold0280 (1 HSPs)
scaffold0280 (61-89)||(13533-13561)
[»] scaffold0136 (1 HSPs)
scaffold0136 (31-90)||(22439-22498)


Alignment Details
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 54726107 - 54725932
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaaaccataattttaatcatggtccatggagttgaattaaccata 132  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54726107 attaattgaatgaacctaaaaatcaaaatttgcttatatttaaaaacggagggagtaaaccataattttaatcatggtccatggagttgaattaaccata 54726008  T
Q  133 atttaagtcttgaattcaataataacgacaatttttacataaacgggacgtggagcgggtgtaaattgttgatgtc 208  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54726007 atttgagtcttgaattcaataataacgacaatttttacataaacgggacgtggagcgggtgtaaattgttgatgtc 54725932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 54726115 - 54726199
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||||||||||||||||| |||||    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  54726115 gtggtctatattataaatcacatatatcattaattaa----atgaatctaaaagtcaaaatttgcttatatttaaaaacggagggagta 54726199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 1043961 - 1043903
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| || |||||||||||||||||||||| |||||||||| |||||    
T  1043961 tcattaattgaatgaacctgaaagtcaaaatttgcttatattaaaaaacggagggagta 1043903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 34935592 - 34935534
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||    
T  34935592 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagagagta 34935534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 22995782 - 22995839
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagt 88  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||||| ||||    
T  22995782 tcattaattgaatgaacctaaaaagcaaaatttgcttatatttaaaaacggagggagt 22995839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22528912 - 22528997
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||| |||||| |||||| |||||| |||    ||||||||||||||||  ||||||||||||||| |||||||||| ||||||    
T  22528912 gtggtctataatataaaccacatacatcattgatt----gaatgaatctaaaagttcaaatttgcttatattaaaaaacggagggagtaa 22528997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 43898147 - 43898096
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  43898147 tcattaattgaatgaatctaaaaagtaaaatttgcttatatttaaaaacgga 43898096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 1044009 - 1044067
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||| |||||||| |||||||||||||||| |||||||||| |||||    
T  1044009 tcattaattaaatgaacctaaaagttaaaatttgcttatattaaaaaacggagggagta 1044067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 19679016 - 19678958
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| |||||||  |||||||||||||||||| |||||||| |||||    
T  19679016 tcattaattgaatgaacctaaaaggtaaaatttgcttatatttagaaacggagggagta 19678958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 32998554 - 32998612
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| |||||| | |||||||||||||||||  ||||||||||||||    
T  32998554 tcattaattgaatgaacctaaaaattaaaatttgcttatattttgaaacggagagagta 32998612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 5326811 - 5326888
Alignment:
Q  8 atattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagag 85  Q
    ||||||| ||| ||||| |||||| ||||||| |||||||||||||   |||||||||||||| |||||||| |||||    
T  5326811 atattatgaattacatacatcattaattaattaaatgaatctaaaaaataaaatttgcttataattaaaaaccgagag 5326888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 12569190 - 12569246
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||   ||||||||||||||||| ||||||||| |||||    
T  12569190 attaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagggagta 12569246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 13545654 - 13545710
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||   ||||||||||||||||| ||||||||| |||||    
T  13545654 attaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagggagta 13545710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 22528906 - 22528854
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  22528906 tcattgattgaatgaacctaaaagtctaaatttgcttatattaaaaaacggag 22528854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 42595823 - 42595875
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||||||||||   ||||||||||||||||| |||||||||    
T  42595823 tcattaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggag 42595875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 52638113 - 52638040
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||| ||| |||||||||||||   |||| |||||||||||||| |||||| |||||||||||||||||||||||||    
T  52638113 gtggtcgataatataaatcacata---catt-attaattgaatgaacctaaaa-tcaaaatttgcttatatttaaaaac 52638040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 50623122 - 50623180
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||||||||||||  |||||||| |||||    
T  50623122 tcattaattgaatgaatctaaaaaataaaatttgcttatattttgaaacggagggagta 50623180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 52638119 - 52638157
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttat 69  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  52638119 tcattaattgaatgaatctaaaagttaaaatttgcttat 52638157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 28906765 - 28906716
Alignment:
Q  41 aatgaatct-aaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  28906765 aatgaatctcaaaagtaaaaatttgcttatatttaaaaacggagggagta 28906716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 49562088 - 49562035
Alignment:
Q  32 cattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagag 85  Q
    |||||||||||| |||||||||   |||||||||||||||||||||||| ||||    
T  49562088 cattaattgaataaatctaaaaagtaaaatttgcttatatttaaaaacgaagag 49562035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 26043304 - 26043252
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||| |||||||||||||   ||||||| |||||||||||||||||||    
T  26043304 tcattaattcaatgaatctaaaaagtaaaatttacttatatttaaaaacggag 26043252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 7933608 - 7933663
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||| ||||||   |||||||||||||||||  |||||||||||||||    
T  7933608 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagagagtaa 7933663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 24599965 - 24600024
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    ||||||||||||| || ||||||   ||||||||||||||||||| ||||||| ||||||    
T  24599965 tcattaattgaataaacctaaaaagtaaaatttgcttatatttaagaacggagggagtaa 24600024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 25995628 - 25995686
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||| |||||| |||||| ||||||||||||||||||||||| |||||    
T  25995628 tcattaaatgaatgaacctaaaaagtcaaa-tttgcttatatttaaaaacggagggagta 25995686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 32589369 - 32589315
Alignment:
Q  31 tcattaattgaatgaatct-aaaagtcaaaatttgcttatatttaaaaacggagag 85  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||  ||||||||||    
T  32589369 tcattaattgaatgaatctaaaaagtc-aaatttgcttatattttgaaacggagag 32589315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 43333973 - 43333922
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   ||||||| ||||||||||||||||||    
T  43333973 tcattaattgaatgaacctaaaacgtaaaatttacttatatttaaaaacgga 43333922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 46151073 - 46151018
Alignment:
Q  34 ttaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||||||   ||||||||||||||||| |||||| || |||||    
T  46151073 ttaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacgtagggagta 46151018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 7672747 - 7672689
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   ||||||| |||||||||  |||||||| |||||    
T  7672747 tcattaattgaatgaatctaaaaagtaaaattttcttatattttgaaacggagggagta 7672689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 17005012 - 17004954
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||    || ||||||||||||||||||||||| |||||    
T  17005012 tcattaattgaatgaacctaaaaaatcaattttgcttatatttaaaaacggagggagta 17004954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 17940242 - 17940184
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||| ||||||   ||| ||||||||||||||||||||||| |||||    
T  17940242 tcattaaatgaatgaacctaaaaagtaaattttgcttatatttaaaaacggagggagta 17940184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 19679048 - 19679106
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||  |||||   |||||||||||||||||| |||||||| |||||    
T  19679048 tcattaattgaatgaacttaaaaagtaaaatttgcttatatttagaaacggagggagta 19679106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 29076594 - 29076527
Alignment:
Q  12 tataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||||||    ||||||||||| |||||||   || ||| |||||||||||||||||||    
T  29076594 tataaatcacatatatcatt----aattgaatgaacctaaaagatcaattttacttatatttaaaaacggag 29076527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 34205617 - 34205559
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  34205617 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 34205559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 46739361 - 46739303
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||| ||||||| |||||||| |||||    
T  46739361 tcattaattgaatgaacctaaaaagtaaaatttgctcatatttagaaacggagggagta 46739303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 51256621 - 51256563
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||| ||||||||| |||||||| |||||    
T  51256621 tcattaattgaatgaacctaaaaagtaaaatttgtttatatttagaaacggagggagta 51256563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18480936 - 18481014
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||| |||||||||| |||||| ||||||    ||||| || || ||||||   |||||||||||||||||||||||||||    
T  18480936 gtggtccatattataaaccacatacatcatt----aattggataaacctaaaaagtaaaatttgcttatatttaaaaacggag 18481014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42595817 - 42595724
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcat-----taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| |||||||||| |||||| |||||| ||     |||||||||||| ||||||   |||||||| |||||||| ||||||||| |||||    
T  42595817 gtggtccatattataaaccacatacatcattaatataattaattgaatgaacctaaaaagtaaaatttgtttatattttaaaacggagggagta 42595724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 51256655 - 51256704
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||| |||||||||||||||   |||||||||||||||||| |||||||    
T  51256655 attaactgaatgaatctaaaaagtaaaatttgcttatatttataaacgga 51256704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 5790701 - 5790645
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||| ||||||   ||||||||||||||| | ||||||||| |||||    
T  5790701 attaattgaatgaacctaaaaagtaaaatttgcttatatattaaaacggagggagta 5790645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 7672779 - 7672831
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||||||||||   ||||||| |||||||||  ||||||||    
T  7672779 tcattaattgaatgaatctaaaaagtaaaattttcttatattttgaaacggag 7672831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 8126182 - 8126126
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||||||||   |||||||||||||||||  |||||||| |||||    
T  8126182 attaattaaatgaatctaaaaagtaaaatttgcttatattttgaaacggagggagta 8126126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 8126197 - 8126258
Alignment:
Q  8 atattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatattt 73  Q
    |||||||||| ||||||||||||    |||||||||||| ||||||   |||||||||||||||||    
T  8126197 atattataaaccacatatatcat----taattgaatgaacctaaaaaataaaatttgcttatattt 8126258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 32146518 - 32146466
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||| ||| |||||   ||||||| |||||||||||||||||||    
T  32146518 tcattaattgaataaatttaaaaagtaaaatttacttatatttaaaaacggag 32146466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 51486480 - 51486429
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  51486480 tcattaattgaatgaacctaaaaagtcaat-tttgcttatatttaaaaacgga 51486429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 2e-82; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 5301969 - 5301791
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaaaccataattttaatcatggtccatggagttgaattaaccata 132  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5301969 attaattgaatgaacctaaaaatcaaaatttacttatatttaaaaacggagggagtaaaccataattttaatcatggtccatggagttgaattaaccata 5301870  T
Q  133 atttaagtcttgaattcaataataacgacaatttttacataaacgggacgtggagcgggtgtaaattgttgatgtccat 211  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5301869 atttgagtcttgaattcaataataatgacaatttttacataaacgggacgtggagcgggtgtaaattgttgatgtccat 5301791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5301977 - 5302065
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  5301977 gtggtctatattataaatcacatatatcattaattaattgaatgaatctaaaagtcaaaatttacttatatttaaaaacagagggagta 5302065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 27082434 - 27082376
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| ||||||| |||||    
T  27082434 tcattaattgaatgaatttaaaagtcaaaatttgcttataattaagaacggagggagta 27082376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 2033223 - 2033165
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| |||||||| ||||||||||||||||  ||||||||| |||||    
T  2033223 tcattaattgaatgaacctaaaagttaaaatttgcttatattagaaaacggagggagta 2033165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 2033255 - 2033313
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||  | |||||||||||||||||||||| |||||||||| |||||    
T  2033255 tcattaattgaatgaacttgaaagtcaaaatttgcttatattaaaaaacggagggagta 2033313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 19687553 - 19687613
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaaa 91  Q
    |||||||||||||||| ||||||   ||||||||| ||||||||||||||||| |||||||    
T  19687553 tcattaattgaatgaacctaaaaagtaaaatttgcatatatttaaaaacggagggagtaaa 19687613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 11400800 - 11400847
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacg 80  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  11400800 attaattaaatgcatctaaaattcaaaatttgcttatatttaaaaacg 11400847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 17181378 - 17181428
Alignment:
Q  32 cattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||||||||||||||||||||   |||||||| |||||||||||||||||    
T  17181378 cattaattgaatgaatctaaaaagtaaaatttgtttatatttaaaaacgga 17181428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 17854890 - 17854832
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||| ||||||||||||| |||| |||||    
T  17854890 tcattaattgaatgaatctaaaaaataaaatttgtttatatttaaaaatggagggagta 17854832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 18685209 - 18685255
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  18685209 attgaatgaatctaaaaatcaaaatttacttatattaaaaaacggag 18685255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 256126 - 256085
Alignment:
Q  41 aatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  256126 aatgaacctaaaagtcaaaatttgcttataattaaaaacgga 256085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3212321 - 3212240
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagaga 86  Q
    |||||| ||| ||||||||||||| ||||||    ||||||||||| |||||| |  || ||| ||||||||||||||||||||||    
T  3212321 gtggtccataatataaatcacatacatcatt----aattgaatgaacctaaaaattcaattttacttatatttaaaaacggagaga 3212240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7418955 - 7418878
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||| || |||||| ||||||    ||||||||||| ||||||   |||||||||||||||||| |||||||    
T  7418955 gtggtctatattatgaaccacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 7418878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 15467637 - 15467714
Alignment:
Q  5 tctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagaga 86  Q
    |||||||||||||||||||| |||||    ||||||||||||||| |||   ||| ||| |||||| |||||||||||||||    
T  15467637 tctatattataaatcacatacatcat----taattgaatgaatctgaaaaataaattttacttataattaaaaacggagaga 15467714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 32786202 - 32786262
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaaa 91  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||||    
T  32786202 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtaaa 32786262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 1858328 - 1858277
Alignment:
Q  34 ttaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagag 85  Q
    ||||||||||||||| ||||   |||||||||||||||||| ||||||||||    
T  1858328 ttaattgaatgaatccaaaaaataaaatttgcttatatttagaaacggagag 1858277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 10731537 - 10731617
Alignment:
Q  5 tctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||| |||||| |||||    |||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  10731537 tctatattataaaccacatacatcat----taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 10731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 11989228 - 11989287
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| ||||||    
T  11989228 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtaa 11989287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 256165 - 256223
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||| |||| || |||||||| |||||||||||||| ||||||| |||| |||||    
T  256165 tcattaatggaatcaacctaaaagttaaaatttgcttataattaaaaatggagggagta 256223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 2693748 - 2693806
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||| ||||||   | | |||||||||||||||||||||||||||||    
T  2693748 tcattaaatgaatgaacctaaaaagtagattttgcttatatttaaaaacggagagagta 2693806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 3418844 - 3418901
Alignment:
Q  33 attaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||| |||||| |||||  ||||||||||||||||||||||| ||||||    
T  3418844 attaattgaatgaacctaaaaagtcaat-tttgcttatatttaaaaacggagtgagtaa 3418901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 7246937 - 7246880
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||||| || |||||||||||||| ||| |||| |||||    
T  7246937 tcattaattgaatgaacctaaaagtc-aattttgcttatatttataaatggagtgagta 7246880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29168565 - 29168495
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaa-gtcaaaatttgcttata 70  Q
    ||||| |||| |||| | |||||| |||||| ||| || |||||||||||||| |||||||||||||||||    
T  29168565 gtggtatataatatagaccacatacatcatttattcatcgaatgaatctaaaaagtcaaaatttgcttata 29168495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 31577525 - 31577583
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||| ||||||||||||| |||||||| ||||||    
T  31577525 tcattaattgaatgaacctaaaaaataaattttgcttatattttaaaacggatagagta 31577583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 31577491 - 31577446
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaa 78  Q
    |||||||||||||||||||||   ||||||||||||||||| ||||    
T  31577491 attaattgaatgaatctaaaaaataaaatttgcttatattttaaaa 31577446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 5433417 - 5433476
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    ||||||||||||||||  ||||| |||||| |||||||||| |||||||||||| ||||||    
T  5433417 tcattaattgaatgaacataaaaagtcaaa-tttgcttataattaaaaacggagggagtaa 5433476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 6048010 - 6047970
Alignment:
Q  31 tcattaattgaatgaatct-aaaagtcaaaatttgcttata 70  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  6048010 tcattaattgaatgaatctaaaaagtcaaaatttgtttata 6047970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 19687521 - 19687473
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||||| ||||||   |||||||||||||||||| ||||    
T  19687521 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaac 19687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 29938404 - 29938345
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    ||||||| ||||||||||||||| |||||  |||||||||||||||||||| || ||||||    
T  29938404 tcattaaatgaatgaatctaaaaagtcaat-tttgcttatatttaaaaacgaagggagtaa 29938345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 9005010 - 9005091
Alignment:
Q  4 gtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||||||||   |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  9005010 gtctataatataaatcacata---catt-attaattgaatgaacctaaaagtcaaaatttgcttatatttaaaaacggagggagta 9005091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 17096491 - 17096439
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  17096491 attgaatgaatctaaaagtcaaaatttgcttatattaaaaaacggagggagta 17096439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 11773508 - 11773458
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  11773508 attaattgaatgaatttaaaagtcgaaatttgcttatatttaaaaacggag 11773458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 20362031 - 20361973
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||    
T  20362031 tcattaattgaatgaatctaaaaagtaaaatttgcttatatttaaaaacggagggagta 20361973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 3161312 - 3161368
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagag 87  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||||||||||||    
T  3161312 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagagag 3161368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 12165338 - 12165279
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||||||    
T  12165338 tcattaattaaatgaatctaaaaagtcaaaatttgcttataattaacaacggagagagta 12165279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 14571062 - 14571004
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||||||||||||| |||||||| |||||    
T  14571062 tcattaattgaatgaatctaaaaaataaaatttgcttatatttagaaacggagggagta 14571004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 22565674 - 22565601
Alignment:
Q  3 ggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    ||||||||||||||| |||||| |||||| |||   |||||||| |||||| |||||||||| ||||||||||||||    
T  22565674 ggtctatattataaaccacatacatcattaatt---tgaatgaacctaaaaatcaaaatttgtttatatttaaaaac 22565601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 22565682 - 22565732
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgg 81  Q
    |||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  22565682 tcattaattgaatgaacctaatagtcaaaatttgtttatatttaaaaacgg 22565732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 9005001 - 9004944
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagt 88  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||| |||||| ||||    
T  9005001 tcattaattaaatgaatctaaaagttaaaatttgtttatatttaaatacggagggagt 9004944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 6638282 - 6638226
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||| ||||||   ||||||||||||||||||||||||||| |||||    
T  6638282 attaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagggagta 6638226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 7164891 - 7164839
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||| |||||    
T  7164891 attgaatgaacctaaaaatcaaaatttgcttatattaaaaaacggagggagta 7164839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 14642104 - 14642144
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatattt 73  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  14642104 attaattgaatgaatctaaaattcaaaatttgcttatattt 14642144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 14416460 - 14416409
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||||    
T  14416460 tcattaattgaatgaatctaaaaaataaaatttgcttatattttaaaacgga 14416409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 30778052 - 30778013
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatt 72  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  30778052 attaattgaatgaatctaaaagtcaaaatttacttatatt 30778013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 30778093 - 30778144
Alignment:
Q  38 ttgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| || ||||||||||||||||||||||||| |||||||||| |||||    
T  30778093 ttgaataaacctaaaagtcaaaatttgcttatattaaaaaacggagggagta 30778144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35172510 - 35172426
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||  ||||||| ||||||    |||||||||||  ||||| ||||||||| |||||| |||||||||||| |||||    
T  35172510 gtggtctatattataggtcacatacatcatt----aattgaatgaacttaaaaatcaaaattttcttataattaaaaacggagggagta 35172426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 35245694 - 35245753
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| ||||||   ||||||||||||||||| ||||||||| ||||||    
T  35245694 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagggagtaa 35245753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 14064864 - 14064806
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||| ||||||||||||||||||| |||||    
T  14064864 tcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggagggagta 14064806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 23042048 - 23042106
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||| ||||||   ||| |||||||||||||||||||||||||||||    
T  23042048 tcattaattcaatgaacctaaaaagtaaattttgcttatatttaaaaacggagagagta 23042106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 29112338 - 29112280
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||| |||||||||||| |||||    
T  29112338 tcattaattgaatgaacctaaaaaataaaatttgcttataattaaaaacggagggagta 29112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 34102161 - 34102219
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||||||||||  ||| |||| ||||||||| |||||||| |||||    
T  34102161 tcattaattgaatgaatctaaaaggtaaattttgtttatatttagaaacggagggagta 34102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 43585549 - 43585491
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||| |||||||||||||||||| |||||    
T  43585549 tcattaattgaatgaacctaaaaagtaaaatttgtttatatttaaaaacggagggagta 43585491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 1723329 - 1723378
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacg 80  Q
    |||||||||||||||| ||||||   ||||||||||||||||||||||||    
T  1723329 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacg 1723378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 11773544 - 11773589
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaa 78  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||    
T  11773544 attaattgaatgaacttaaaagtcaaaatttgcttatagttaaaaa 11773589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14064870 - 14064948
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||| ||||||| ||||||||| |||||    |||||||||||||||||||   ||  |||||||||||||||||||||||    
T  14064870 gtggtccatattatgaatcacatacatcat----taattgaatgaatctaaaaagtaatttttgcttatatttaaaaacggag 14064948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15966016 - 15966094
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||| |||||| |||||    |||||||||||| ||||||   |||||||||||||||||  ||||||||    
T  15966016 gtggtctatattataaaccacatacatcat----taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggag 15966094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7336915 - 7336992
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||| |||||||||| |||||| |||||    |||||||||||| ||||||   |||||||||||||||||| |||||||    
T  7336915 gtggtccatattataaaccacatacatcat----taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 7336992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 7581449 - 7581522
Alignment:
Q  5 tctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||| || ||||||||||||    ||||||||| || |||||| | |||||||||||||||||| |||||||    
T  7581449 tctatattatgaaccacatatatcat----taattgaataaacctaaaaattaaaatttgcttatatttagaaacgga 7581522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 12442851 - 12442903
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||||||||| |||||||| | ||||| | ||||||||||    
T  12442851 tcattaattgaatgaatctaaaaatcaaaattagtttataataaaaaacggag 12442903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 16985379 - 16985331
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    ||||||||| |||||| ||||||||||||||||||||||| | ||||||    
T  16985379 tcattaattaaatgaacctaaaagtcaaaatttgcttataataaaaaac 16985331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 16985394 - 16985442
Alignment:
Q  41 aatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||||||||||| |||| |||||||| ||| |||||    
T  16985394 aatgaatctaaaagtcaaaatttgcgtataattaaaaacagagggagta 16985442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 22584318 - 22584366
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||||    
T  22584318 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaac 22584366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 26168248 - 26168333
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||| |||||||||| |||||| |||||    |||||||||||| ||||||   |||||||||||||||||  |||||||| ||||||    
T  26168248 gtggtccatattataaaccacatacatcat----taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtaa 26168333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 29807132 - 29807084
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||||||||||||   |||||||||||||||| ||||||    
T  29807132 tcattaattgaatgaatctaaaaagtaaaatttgcttatattaaaaaac 29807084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 29807164 - 29807220
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||   |||||||||||||||| | |||||||| |||||    
T  29807164 attaattgaatgaatctaaaaagtaaaatttgcttatattaagaaacggagggagta 29807220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 10832429 - 10832374
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||| ||||||   ||||||| ||||||||| ||||||||||||||||    
T  10832429 taattgaatgaagctaaaaagtaaaatttacttatattttaaaacggagagagtaa 10832374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 14642070 - 14642023
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaa 78  Q
    ||||||||||||| || |||||| |||||||||||| |||||||||||    
T  14642070 tcattaattgaataaacctaaaaatcaaaatttgctaatatttaaaaa 14642023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 29255740 - 29255795
Alignment:
Q  34 ttaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||| ||||||   |||||||||||||||||| |||||||| |||||    
T  29255740 ttaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 29255795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 34186441 - 34186500
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| ||||||    || ||||||||||||||||||||||| ||||||    
T  34186441 tcattaattgaatgaacctaaaaactcaattttgcttatatttaaaaacggagggagtaa 34186500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37039752 - 37039836
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||| || |||||| ||||||    || |||||||| |||||| |  || ||||||||||||||||||||||| |||||    
T  37039752 gtggtctatattatgaaccacatacatcatt----aaatgaatgaacctaaaaatttaattttgcttatatttaaaaacggagggagta 37039836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 43585581 - 43585632
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   ||| ||||||||||||||||||||||    
T  43585581 tcattaattgaatgaacctaaaaagtaaattttgcttatatttaaaaacgga 43585632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 13420520 - 13420578
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||| ||||||    |||||||||||||||||||||||||| |||||    
T  13420520 tcattaattaaatgaacctaaaaaatcaaatttgcttatatttaaaaacggagggagta 13420578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 18942072 - 18942130
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||| | |||||| |||||    
T  18942072 tcattaattgaatgaacctaaaaaataaaatttgcttatatttagatacggagggagta 18942130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 19784588 - 19784530
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  19784588 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 19784530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 19784609 - 19784667
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  19784609 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 19784667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 20207215 - 20207157
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||||  || |||||||||||||| |||| ||| |||||    
T  20207215 tcattaattgaatgaacctaaaagttcaattttgcttatatttagaaactgagggagta 20207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 24433621 - 24433679
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||| ||||||||| ||||||||| |||||    
T  24433621 tcattaattgaatgaacctaaaaaataaaatttacttatattttaaaacggagtgagta 24433679  T

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Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 29112361 - 29112419
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||||| |||||||||||||| || |||||    
T  29112361 tcattaattgaatgaacctaaaaagtaaaatttgcatatatttaaaaacgaagggagta 29112419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 32146881 - 32146823
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| | |||||| ||||||   ||| |||||||||||||||||||||||||||||    
T  32146881 tcattaaataaatgaacctaaaaagtaaattttgcttatatttaaaaacggagagagta 32146823  T

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Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 33696741 - 33696799
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  33696741 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 33696799  T

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Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 34102129 - 34102071
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||| ||||||   ||| ||||||||||||||||||||||| |||||    
T  34102129 tcattaattcaatgaacctaaaaaataaattttgcttatatttaaaaacggagggagta 34102071  T

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Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 35172518 - 35172564
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||   |||||||||||||||||||||| ||||||||    
T  35172518 attaattgaatgatcataaaagtcaaaatttgcttatagttaaaaac 35172564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 35969095 - 35969037
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||||||||||   |||||||| ||||||||| ||||||| ||||||    
T  35969095 tcattaattaaatgaatctaaaaagtaaaatttgtttatatttagaaacggatagagta 35969037  T

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Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 39126100 - 39126142
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatattt 73  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  39126100 tcattaattgaatgaatctaaaaagtaaaatttgcttatattt 39126142  T

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Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 7581437 - 7581388
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||| |||||||||||||||   |||||||||||||||||| |||||||    
T  7581437 attaaatgaatgaatctaaaaagtaaaatttgcttatatttagaaacgga 7581388  T

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Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 20367362 - 20367313
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacg 80  Q
    |||||||||||||||||||||||   |||||||| ||||||||| |||||    
T  20367362 tcattaattgaatgaatctaaaaagtaaaatttgtttatatttagaaacg 20367313  T

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Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 35067973 - 35067928
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaa 76  Q
    |||||||||||||||| ||||||   ||||||||||||||||||||    
T  35067973 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaa 35067928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 36792724 - 36792773
Alignment:
Q  34 ttaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||||||   ||||||| ||||||||| |||||||||    
T  36792724 ttaattgaatgaatctaaaaagtaaaatttacttatattttaaaacggag 36792773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 39916373 - 39916422
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||| ||||||   |||||||||||||||||| |||||||    
T  39916373 attaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 39916422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 43340503 - 43340552
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||| ||||||   ||||||||||||||||| ||||||||    
T  43340503 attaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacgga 43340552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 9984975 - 9984923
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||| |||||| ||||||   |||||||||||||| ||||||||||||    
T  9984975 tcattaattaaatgaacctaaaaaataaaatttgcttataattaaaaacggag 9984923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 15385896 - 15385948
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||  |||||   ||||||||||||||||| |||||||||    
T  15385896 tcattaattgaatgaacttaaaaagtaaaatttgcttatattttaaaacggag 15385948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 15577553 - 15577605
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||| |||||| | ||||  ||||||||| ||||||||||||||||||    
T  15577553 tcattaattaaatgaaccaaaaaagcaaaatttgtttatatttaaaaacggag 15577605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 20207237 - 20207285
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||||||||||||   ||| ||| |||||||||||||||    
T  20207237 tcattaattgaatgaatctaaaaaataaattttacttatatttaaaaac 20207285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 35245645 - 35245585
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaaa 91  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||| ||| |||||||    
T  35245645 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaactgagggagtaaa 35245585  T

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Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37396284 - 37396200
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| ||||||||| ||| ||||||    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  37396284 gtggtctataatataaatcatatacatcatt----aattgaatgaatctaaaagtcaaaatttgcttatattaaaaaacggagggagta 37396200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 9071259 - 9071201
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  9071259 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaatacggagggagta 9071201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4637067 - 4637145
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||| |||||| |||||| |||||    |||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  4637067 gtggtctataatataaaccacatacatcat----taattgaatgaatctaaaagtcaaaatttgtttatattaaaaaacggag 4637145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 40534494 - 40534445
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  40534494 attaattgaatgaacttaaaagtcaaaatttgcttatatttaaaaacgga 40534445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 9071293 - 9071349
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||    
T  9071293 attaattgaatgaacttaaaagtcaaaatttgcttatatttaaatacggagggagta 9071349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4898245 - 4898161
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| ||||||||||||||||| ||||||    ||||||||||| ||||||   |||||||||||||||||| |||||||| |||||    
T  4898245 gtggtccatattataaatcacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 4898161  T

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Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4945639 - 4945555
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| ||||||||||||||||| ||||||    ||||||||||| ||||||   |||||||||||||||||| |||||||| |||||    
T  4945639 gtggtccatattataaatcacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 4945555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32473551 - 32473467
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||| || |||||| ||||||    ||||||||||||||||||   |||||||||||||||||||||| |||| |||||    
T  32473551 gtggtctatattatgaaccacatacatcatt----aattgaatgaatctaaaaaataaaatttgcttatatttaaaaatggagggagta 32473467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 40534675 - 40534726
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  40534675 tcattaattgaatgaatctaaaagttaaaatttacttatattttaaaacgga 40534726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 15178068 - 15178010
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||  |||||||||||||||||||||| | |||||||||| |||||    
T  15178068 tcattaattgaatgaacttaaaagtcaaaatttgcttataataaaaaacggagggagta 15178010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 4637055 - 4637003
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| ||||||||||||||||||||||||| |||||| ||| |||||    
T  4637055 attgaatgaacctaaaagtcaaaatttgcttatattaaaaaacagagggagta 4637003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 5580304 - 5580252
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||||||||||  |||||||||||||| | ||||||||||    
T  5580304 tcattaattgaatgaatctaaaagctaaaatttgcttataataaaaaacggag 5580252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 2795396 - 2795451
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagaga 86  Q
    |||||||||||||||| ||||||   ||||||||||||||||| ||||||||||||    
T  2795396 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagaga 2795451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 9895259 - 9895212
Alignment:
Q  36 aattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||    
T  9895259 aattgaatgaatttaaaagtcaaaatttgcttataataaaaaacggag 9895212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10041622 - 10041538
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| |||||| |||||| |||||    ||||||||||||   ||||||| |||||||||| |||||||| |||||    
T  10041622 gtggtctatattataaaccacatacatcattaattaa----atgaatctaaaatgtaaaattttcttatatttagaaacggagggagta 10041538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10099632 - 10099548
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| |||||| |||||| |||||    ||||| ||||||   |||||||||||||||||| |||||||| |||||    
T  10099632 gtggtctatattataaaccacatacatcattaattaa----atgaacctaaaatgtaaaatttgcttatatttagaaacggagggagta 10099548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 25668465 - 25668406
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| ||||||  ||||||||| ||||||||| |||||||| ||||||    
T  25668465 tcattaattgaatgaacctaaaaagcaaaatttgtttatatttagaaacggagggagtaa 25668406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 28680925 - 28680976
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||||||||||   |||||||| |||||||||||||||||    
T  28680925 tcattaattgaatgaatctaaaaagaaaaatttgtttatatttaaaaacgga 28680976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 32070547 - 32070598
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  32070547 tcattaattgaatgaacctaaaatgtaaaatttgcttatatttaaaaacgga 32070598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 34911184 - 34911243
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| ||||||   ||||||||||||||||| ||||| ||||||||||    
T  34911184 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacagagagagtaa 34911243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37131732 - 37131816
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| ||||||||||||||||| |||||    ||||||||||||| |||||   |||||||||||||||||  ||||||| ||||||    
T  37131732 gtggtccatattataaatcacataaatcat----taattgaatgaatataaaacgtaaaatttgcttatattttgaaacggatagagta 37131816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 37396290 - 37396337
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaa 78  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  37396290 tcattgattgaatgaacctaaaagtcaaaatttgcttatattaaaaaa 37396337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 38262071 - 38262122
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  38262071 tcattaattgaatgaacctaaaaaataaaatttgcttatatttaaaaacgga 38262122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 42579105 - 42579164
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||||||||||   ||||||| |||||||||||||| |||| ||||||    
T  42579105 tcattaattgaatgaatctaaaaagtaaaatttacttatatttaaaaatggagggagtaa 42579164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 324850 - 324792
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||  |||||   |||||||||||||||||| ||||||||||||||    
T  324850 tcattaattgaatgaacttaaaaagtaaaatttgcttatatttagaaacggagagagta 324792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 8554725 - 8554667
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||||||||||   |||||||||||||||| |||||||||| |||||    
T  8554725 tcattaattaaatgaatctaaaaagtaaaatttgcttatattaaaaaacggagggagta 8554667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 9158028 - 9157970
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||| ||||||||||   |||||||||||||||||| |||||||| |||||    
T  9158028 tcattaattgaaagaatctaaaaagtaaaatttgcttatatttagaaacggagggagta 9157970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 37486085 - 37486143
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||| |||||||| |||||    
T  37486085 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 37486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 18719353 - 18719304
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||| |||||||| |||| ||||||||||||| |||||||    
T  18719353 attaattgaatgaacctaaaagttaaaaattgcttatatttataaacgga 18719304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20195369 - 20195291
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||| ||||||| ||||||||| ||||||    ||||||||||||||||||   ||||||| ||||||||| |||||||||    
T  20195369 gtggtccatattatgaatcacatacatcatt----aattgaatgaatctaaaaagtaaaatttacttatattttaaaacggag 20195291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 5580336 - 5580388
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||  | |||||||||||||||||||| | ||||||||||    
T  5580336 tcattaattgaatgaactttaaagtcaaaatttgcttataataaaaaacggag 5580388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 9895268 - 9895320
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||| ||| ||||||||||||||| |||||| | ||||||||||    
T  9895268 tcattaattgaataaatttaaaagtcaaaatttacttataataaaaaacggag 9895320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 32346132 - 32346072
Alignment:
Q  31 tcattaattgaatgaatct-aaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    ||||||||||||||||||| |||||||||  |||  ||||||||||||||||||| |||||    
T  32346132 tcattaattgaatgaatctaaaaagtcaatttttttttatatttaaaaacggagaaagtaa 32346072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 45095569 - 45095518
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| |||||| | |||||||| ||||||||||||||||||    
T  45095569 tcattaattgaatgaacctaaaaat-aaaatttgtttatatttaaaaacggag 45095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 15178087 - 15178148
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgctta---tatttaaaaacggagagagta 89  Q
    ||||||||||||| ||| ||||||| ||||||||||||   ||||||||||||||| |||||    
T  15178087 tcattaattgaataaatttaaaagttaaaatttgcttatactatttaaaaacggagggagta 15178148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 29573868 - 29573810
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| ||||||||||||| |||||  ||||||||||||||||||||||| |||||    
T  29573868 tcattaatttaatgaatctaaaaagtcaat-tttgcttatatttaaaaacggagggagta 29573810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 36490565 - 36490616
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   |||||||||||||||||| |||||||    
T  36490565 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 36490616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 18719366 - 18719400
Alignment:
Q  49 taaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||| |||||||||||||||||||||||||||||    
T  18719366 taaaaatcaaaatttgcttatatttaaaaacggag 18719400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 24971259 - 24971201
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| ||||||||||||||||   |||||||||||||||||  |||||||| |||||    
T  24971259 tcattagttgaatgaatctaaaaagtaaaatttgcttatattttgaaacggagggagta 24971201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 25668497 - 25668555
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||| ||||||   |||||||||||||||||| |||||||| |||||    
T  25668497 tcattaattaaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 25668555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 26567690 - 26567632
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  26567690 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 26567632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 26567726 - 26567780
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||| ||||||   ||||||||||||||||| ||||||||| |||||    
T  26567726 taattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagggagta 26567780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 31211785 - 31211739
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgg 81  Q
    |||||||||||||||||||   |||||||||||||||||| ||||||    
T  31211785 taattgaatgaatctaaaaagtaaaatttgcttatatttagaaacgg 31211739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 31211799 - 31211856
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||| |||||||||||||| | |||||||| |||||||||| ||||||| |||||    
T  31211799 tcattaatggaatgaatctaaaaat-aaaatttgtttatatttaagaacggagggagta 31211856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 40340555 - 40340613
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  40340555 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 40340613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 40669049 - 40669107
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||||||||||   ||| |||||||||||||| |||||||| |||||    
T  40669049 tcattaaatgaatgaatctaaaaagtaaattttgcttatatttagaaacggagggagta 40669107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 45123845 - 45123791
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| || ||||||   ||||||||||||||||||||||||||| |||||    
T  45123845 taattgaatcaacctaaaaagtaaaatttgcttatatttaaaaacggagggagta 45123791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 604909 - 604852
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||||||||   |||||||||||||| ||| |||| ||| ||||||    
T  604909 attaattgaatgaatctaaaaaataaaatttgcttataattagaaacagagtgagtaa 604852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 19822456 - 19822374
Alignment:
Q  3 ggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||  |||||| |||||||||    |||| ||||||||||  ||||||| ||||||| |||||||| |||||||||| |||||    
T  19822456 ggtctattatataaaccacatatat----cattgattgaatgaacttaaaagttaaaatttacttatattaaaaaacggagggagta 19822374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 19842677 - 19842595
Alignment:
Q  3 ggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||  |||||| |||||||||    |||| ||||||||||  ||||||| ||||||| |||||||| |||||||||| |||||    
T  19842677 ggtctattatataaaccacatatat----cattgattgaatgaacttaaaagttaaaatttacttatattaaaaaacggagggagta 19842595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 4898251 - 4898310
Alignment:
Q  31 tcattaattgaatgaatct-aaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| || |||||| |||||||| ||||||||| |||||||| ||||||    
T  4898251 tcattaattgaatgaacctcaaaagt-aaaatttgtttatatttagaaacggagggagtaa 4898310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 4945645 - 4945704
Alignment:
Q  31 tcattaattgaatgaatct-aaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| || |||||| |||||||| ||||||||| |||||||| ||||||    
T  4945645 tcattaattgaatgaacctcaaaagt-aaaatttgtttatatttagaaacggagggagtaa 4945704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5144348 - 5144271
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||| |||||||||| |||||| ||||||    ||||||||||| ||||||   ||||||||||||| ||| ||||||||    
T  5144348 gtggtccatattataaaccacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttatgttttaaaacgga 5144271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 26269341 - 26269289
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| ||| ||  |||||||||||||||||||||||| ||| |||||    
T  26269341 attgaatgaacctagaaagcaaaatttgcttatatttaaaaacagagggagta 26269289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 26269381 - 26269437
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||||||||   |||||||||||||||||| ||| |||| |||||    
T  26269381 attaattaaatgaatctaaaatataaaatttgcttatatttagaaatggagggagta 26269437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 40739546 - 40739494
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| ||||||   ||||||||||||||||| | |||||||    
T  40739546 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttagaacggag 40739494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42230602 - 42230518
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| |||||||||| |||||| ||||||    || ||||||||||||||| |||||  |||||||||||||||| |||||| |||||    
T  42230602 gtggtccatattataaaccacatacatcatt----aaatgaatgaatctaaaaagtcaat-tttgcttatatttaaagacggagggagta 42230518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 45123883 - 45123939
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||| ||||||   ||||||| |||||||||| |||||||| |||||    
T  45123883 attaattgaatgaacctaaaaagtaaaatttacttatatttagaaacggagggagta 45123939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 40952593 - 40952535
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  40952593 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaatacggagggagta 40952535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 48902099 - 48902044
Alignment:
Q  30 ttcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagag 85  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  48902099 ttcattaattgaatgaatctagaagttaaaatttgcttatatttaaaaacggagag 48902044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 24275269 - 24275213
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||    
T  24275269 attaattgaatgaatctaaaagttaaaatttgcttatatttaaaaaccgagggagta 24275213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 54787062 - 54786978
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| |||||| |||||| |||||| |||    ||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  54787062 gtggtctataatataaaccacatacatcattgatt----gaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagggagta 54786978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 21003994 - 21003936
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||    
T  21003994 tcattaattgaatgaacttaaaagtcaaaatttgcttatatttaagaacggagggagta 21003936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 23599865 - 23599923
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||||| |||||    
T  23599865 tcattaattgaatgaatttaaaaatcaaaatttgcttataattaaaaacggagggagta 23599923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 54787068 - 54787126
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||||    
T  54787068 tcattgattgaatgaatctaaatgtcaaaatttgcttatattaaaaaacggagggagta 54787126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 20541185 - 20541238
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  20541185 attgaatgaatctaaaagtcaaaatttgtttatattaaaaaacggagggagtaa 20541238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 40952627 - 40952683
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||    
T  40952627 attaattgaatgaacttaaaagtcaaaatttgcttatatttaaatacggagggagta 40952683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 46779380 - 46779438
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||||||||||   ||||||||||||||||||||||||||| |||||    
T  46779380 tcattaattaaatgaatctaaaaaataaaatttgcttatatttaaaaacggagggagta 46779438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 50038504 - 50038446
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||||||||||||| |||||||| |||||    
T  50038504 tcattaattgaatgaatctaaaaagtaaaatttgcttatatttagaaacggagggagta 50038446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 50045726 - 50045668
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||||||||||||| |||||||| |||||    
T  50045726 tcattaattgaatgaatctaaaaagtaaaatttgcttatatttagaaacggagggagta 50045668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20542883 - 20542805
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||  |||||| ||||||    |||||||||||||||||| ||||||||| |||||| ||||||| ||||    
T  20542883 gtggtctatattataacccacatacatcatt----aattgaatgaatctaaaaatcaaaatttacttataattaaaaatggag 20542805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 22624478 - 22624530
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||| ||||    
T  22624478 tcattaattgaatgaacctaaaagtcaaaatttgcttataataaaaaagggag 22624530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 23599833 - 23599786
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaa 78  Q
    ||||||||||||| || ||||||||||||||||||||||| |||||||    
T  23599833 tcattaattgaataaacctaaaagtcaaaatttgcttataattaaaaa 23599786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 34827558 - 34827609
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||||||||||   |||| |||||||||||||||||||||    
T  34827558 tcattaattgaatgaatctaaaaaataaaacttgcttatatttaaaaacgga 34827609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 55501289 - 55501340
Alignment:
Q  32 cattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  55501289 cattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggag 55501340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 56420517 - 56420576
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| ||||||   |||||||||||||||||| |||||||| ||||||    
T  56420517 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagtaa 56420576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 9968355 - 9968297
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||| ||||||||||||||||||| |||||    
T  9968355 tcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggagggagta 9968297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 21004026 - 21004084
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||| ||||||||||||||||||| | |||||| ||| |||||    
T  21004026 tcattaattgaatgaacctacaagtcaaaatttgcttataataaaaaactgagggagta 21004084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 39754153 - 39754095
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||| || ||||||   |||||||||||||||||| ||||||||||||||    
T  39754153 tcattaattgaataaacctaaaaagtaaaatttgcttatatttagaaacggagagagta 39754095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 39754185 - 39754243
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||| ||||||   |||||||||||||||||||||||||| ||||||    
T  39754185 tcattaattaaatgaacctaaaaaataaaatttgcttatatttaaaaacggaaagagta 39754243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 44496862 - 44496804
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||| |||| |||||    
T  44496862 tcattaattgaatgaacctaaaaaataaaatttgcttatatttaaaaatggagggagta 44496804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 44639832 - 44639890
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||    |||||||||||||||||| ||||||| |||||    
T  44639832 tcattaattgaatgaatctaaaaagtgaaatttgcttatatttaagaacggagggagta 44639890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 51126159 - 51126101
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||||||||||||| ||||||||| |||||    
T  51126159 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagggagta 51126101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 51834617 - 51834667
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgg 81  Q
    |||| ||||||||||||||||||| ||||||||||||||| | ||||||||    
T  51834617 tcatcaattgaatgaatctaaaagccaaaatttgcttataataaaaaacgg 51834667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 9968418 - 9968475
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    ||||||||||||||  |||||   ||||||||||||||||||||||||||| ||||||    
T  9968418 attaattgaatgaacataaaaaataaaatttgcttatatttaaaaacggagggagtaa 9968475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 24331477 - 24331428
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||||||||   |||||||||||||||||| |||||||    
T  24331477 attaattgaatgaatctaaaaaataaaatttgcttatatttagaaacgga 24331428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26206674 - 26206596
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||| ||||||| || |||||||||||||    |||||||| |||||||||   ||||||| |||||||||||||||||||    
T  26206674 gtggtccatattatgaaccacatatatcatt----aattgaataaatctaaaaagtaaaatttacttatatttaaaaacggag 26206596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 26677021 - 26676968
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggaga 84  Q
    |||||||||||||||| ||||||||  || |||| |||||||||||||||||||    
T  26677021 tcattaattgaatgaacctaaaagtataattttgtttatatttaaaaacggaga 26676968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 38224025 - 38224081
Alignment:
Q  33 attaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  38224025 attaaatgaatgaatctaaaaagtcaat-tttgcttatatttaaaaacggagagagta 38224081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 15133920 - 15133972
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||| |||||   ||||||||||||||||| |||||||||    
T  15133920 tcattaattgaatgaatttaaaaagtaaaatttgcttatattttaaaacggag 15133972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 23754278 - 23754338
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaaa 91  Q
    |||||||||||||||| ||||||   ||||||||||||||||| |||| |||| |||||||    
T  23754278 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaatggagggagtaaa 23754338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 44639800 - 44639752
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||||    
T  44639800 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaac 44639752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 70
Target Start/End: Complemental strand, 22624473 - 22624438
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttata 70  Q
    |||||||||||| |||||||||||||||||||||||    
T  22624473 taattgaatgaacctaaaagtcaaaatttgcttata 22624438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 30016959 - 30017010
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||||||||||   |||| ||||||||||||| |||||||    
T  30016959 tcattaattgaatgaatctaaaaactaaaaattgcttatatttagaaacgga 30017010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 41788975 - 41788924
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   |||||||||||||||||| |||||||    
T  41788975 tcattaattgaatgaacctaaaaaataaaatttgcttatatttagaaacgga 41788924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 42013200 - 42013149
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||||||||||||||| |||||   ||||||| ||||||||||||||||||    
T  42013200 tcattaattgaatgaatttaaaaagtaaaatttacttatatttaaaaacgga 42013149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 48902105 - 48902144
Alignment:
Q  52 aagtcaaaatttgcttatatttaaaaacggagagagtaaa 91  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  48902105 aagttaaaatttgcttatatttaaaaacggagggagtaaa 48902144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 50038536 - 50038587
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   ||||||| ||||||||||||||||||    
T  50038536 tcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacgga 50038587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 50045758 - 50045809
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   ||||||| ||||||||||||||||||    
T  50045758 tcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacgga 50045809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 55229602 - 55229544
Alignment:
Q  31 tcattaattgaatgaatct-aaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||||||||||||||||||||    
T  55229602 tcattaaatgaatgaatctgaaaagtgaat-tttgcttatatttaaaaacggagagagta 55229544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 17659551 - 17659593
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatattt 73  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  17659551 tcattaattgaatgaatctaaaaagtaaaatttgcttatattt 17659593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 20542889 - 20542947
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||  ||||||| |||||||| ||||| |||||||| ||| |||||    
T  20542889 tcattaattgaatgaacttaaaagttaaaatttgattataattaaaaacagagggagta 20542947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 24275303 - 24275361
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| ||||| | ||||||| |||||| | ||||| ||||||||||    
T  24275303 tcattaattgaatgaatttaaaaattaaaatttacttataataaaaaatggagagagta 24275361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 25856096 - 25856154
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  25856096 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 25856154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 27080096 - 27080055
Alignment:
Q  32 cattaattgaatgaatctaaaagtcaaaatttgcttatattta 74  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  27080096 cattaattgaatgaatctaaaaat-aaaatttgcttatattta 27080055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 34709629 - 34709571
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||||||||||   ||| |||||||||||||||| |||||| |||||    
T  34709629 tcattaaatgaatgaatctaaaaagtaaattttgcttatatttaaatacggagggagta 34709571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 38938109 - 38938162
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||| |||| |||||    
T  38938109 taattgaatgaatctaaaagtc-aaatttgcttataattagaaatggagggagta 38938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 43635890 - 43635832
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   ||||||| |||||||||  |||||||| |||||    
T  43635890 tcattaattgaatgaatctaaaaagtaaaattttcttatattttgaaacggagggagta 43635832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 48079606 - 48079660
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||| ||||||   ||||||||||||||||| ||||||||| |||||    
T  48079606 taattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagggagta 48079660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 51975210 - 51975268
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||  |||||   ||||||||||||||||| ||||||||| |||||    
T  51975210 tcattaattgaatgaacttaaaaagtaaaatttgcttatattttaaaacggagggagta 51975268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 53508554 - 53508496
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||  ||||||   |||||||||||||||||| |||||||| |||||    
T  53508554 tcattaattgaatgagcctaaaaagtaaaatttgcttatatttagaaacggagggagta 53508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 56420485 - 56420427
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||| |||| ||||||   |||||||| |||||||||||||||||| |||||    
T  56420485 tcattaattgagtgaacctaaaaagtaaaatttgtttatatttaaaaacggagggagta 56420427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5048515 - 5048441
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||| ||||||||||  |||||||||||| |||||    ||||||||||||   |||||||| ||||||||||||||    
T  5048515 gtggtccatattataaactacatatatcattaattaa----atgaatctaaaaaataaaatttgtttatatttaaaaac 5048441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 24156193 - 24156133
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagtaaa 91  Q
    ||||||| |||||||| |||||| |||||  ||||||||||||||||||||||| |||||||    
T  24156193 tcattaaatgaatgaacctaaaaagtcaat-tttgcttatatttaaaaacggagggagtaaa 24156133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 44495738 - 44495686
Alignment:
Q  37 attgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||||| |||||    
T  44495738 attgaatgaacctaaaaagtcaaa-tttgcttatatttaaaaacggagggagta 44495686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 49573933 - 49573885
Alignment:
Q  31 tcattaattgaatgaatcta-aaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  49573933 tcattaattgaatgaatctataaagt-aaaatttgcttatatttagaaac 49573885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 23710885 - 23710837
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||| ||||||   ||||||||||||||||| |||||||||    
T  23710885 taattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggag 23710837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 34827524 - 34827469
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||| |||||||| ||||||| |||||||||| ||||| || |||||    
T  34827524 attaattgaatgaacctaaaagt-aaaatttacttatatttagaaacgaagggagta 34827469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 37306938 - 37306986
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    ||||||||||||||||| |||||   ||||||| |||||||||||||||    
T  37306938 tcattaattgaatgaatttaaaaagtaaaatttacttatatttaaaaac 37306986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43965046 - 43964994
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaa 53  Q
    |||||||||| ||| || |||||| |||||| |||||||||||||| ||||||    
T  43965046 gtggtctataatatgaaccacatacatcattaattaattgaatgaacctaaaa 43964994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 55616903 - 55616958
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| | |||| |||||    
T  55616903 attaaatgaatgaatctaaaagt-aaattttgcttatatttaaagatggagggagta 55616958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 55624207 - 55624262
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| | |||| |||||    
T  55624207 attaaatgaatgaatctaaaagt-aaattttgcttatatttaaagatggagggagta 55624262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3598 - 3514
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| |||||| |||||| |||||| |||    ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  3598 gtggtctataatataaaccacatacatcattgatt----gaatgaatctaaaagtcaaaatttgcttatattaaaaaacggagggagta 3514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 3604 - 3662
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  3604 tcattgattgaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagggagta 3662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 40962112 - 40962055
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||    
T  40962112 attaattgaatgaacctaaaagtcaaaatttgtttatatttaaaaacggagggagtaa 40962055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 9303358 - 9303307
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  9303358 tcattaattgaatgaacctaaaagtcaaaatttgcttataattaaaaacgga 9303307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19293096 - 19293012
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| |||||| |||||| |||||| |||    ||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  19293096 gtggtctataatataaaccacatacatcattgatt----gaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagggagta 19293012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 19293102 - 19293160
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||||    
T  19293102 tcattgattgaatgaatctaaatgtcaaaatttgcttatattaaaaaacggagggagta 19293160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42631859 - 42631773
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaaa 91  Q
    |||||| |||||||||| |||||| ||||||    ||||||||||||||||||   |||||||||||||||||| |||||||| |||||||    
T  42631859 gtggtccatattataaaccacatacatcatt----aattgaatgaatctaaaaagtaaaatttgcttatatttagaaacggagggagtaaa 42631773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 14053050 - 14053102
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  14053050 attgaatgaatctaaaagtcaaaatttgtttatattaaaaaacggagggagta 14053102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 24726113 - 24726030
Alignment:
Q  3 ggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||| |||||||||| |||||||||||||    ||||||| ||| ||||||   ||||||||||||||||||||||||||| ||||||    
T  24726113 ggtccatattataaaccacatatatcatt----aattgaacgaacctaaaaagtaaaatttgcttatatttaaaaacggagggagtaa 24726030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 33934133 - 33934075
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| |||||||||| |||||| |||||||||||||||||| |||||||||| |||||    
T  33934133 tcattgattgaatgaacctaaaaatcaaaatttgcttatattaaaaaacggagggagta 33934075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 43484018 - 43484076
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||||||||||||||||||||||| |||||    
T  43484018 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagggagta 43484076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 40716800 - 40716748
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||||||||||   |||||||||||||||||| ||||||||    
T  40716800 tcattaattgaatgaatctaaaaagtaaaatttgcttatatttagaaacggag 40716748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35201936 - 35202020
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| ||||||| ||||||||||||||||    || |||||||| |||||| |  || ||||||||||||||||||||||| |||||    
T  35201936 gtggtccatattatgaatcacatatatcatt----aaatgaatgaacctaaaaattcaattttgcttatatttaaaaacggagggagta 35202020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 41178044 - 41178102
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||||||||    
T  41178044 tcattaattgaatgaatctaaaaagtcaaa-tttgtttatatttagaaacggagagagta 41178102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 14053012 - 14052954
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| |||||||||| |||||| |||||||||||||||||| |||||| ||| |||||    
T  14053012 tcattgattgaatgaacctaaaaatcaaaatttgcttatattaaaaaacagagggagta 14052954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28464831 - 28464912
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||| |||||||||| | |||| ||||| ||||||||||||||| ||||||   |||||||||||||||||  ||||||||    
T  28464831 gtggtccatattataaaccgcataaatcat-cattaattgaatgaacctaaaaaataaaatttgcttatattttgaaacggag 28464912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 34194614 - 34194556
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||||||||||||  |||||||| |||||    
T  34194614 tcattaattgaatgaatctaaaaagtaaaatttgcttatattttgaaacggagggagta 34194556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 35063514 - 35063457
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| | |||||||||  ||||||||||||||||||||||| |||||    
T  35063514 tcattaattgaatgaaccaaaaagtcaat-tttgcttatatttaaaaacggagggagta 35063457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 43483986 - 43483928
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||    |||||||||||||||||| ||||||| |||||    
T  43483986 tcattaattgaatgaatctaaaaagtgaaatttgcttatatttaagaacggagggagta 43483928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 43844778 - 43844720
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| ||||||||||||||||  | || ||||||||||||||||||||||| |||||    
T  43844778 tcattagttgaatgaatctaaaaaaccaattttgcttatatttaaaaacggagggagta 43844720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 40962141 - 40962190
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||| |||||||| |||||||| ||||||||||| |||||    
T  40962141 attaattgaatgaacctaaaagttaaaatttgtttatatttaaatacgga 40962190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 42631865 - 42631915
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  42631865 tcattaattgaatgaacctaaa-gt-aaaatttgcttatatttaaaaacggag 42631915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 899300 - 899242
Alignment:
Q  31 tcattaattgaatgaatctaaa-agtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||| ||| ||| ||||||||||||||||||| |||||||||    
T  899300 tcattaattgaatgaacctaaatagt-aaattttgcttatatttaaaaacagagagagta 899242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 7256939 - 7256884
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagt 88  Q
    |||||||||||||||||||||   |||||||| |||||||| ||||||||| ||||    
T  7256939 attaattgaatgaatctaaaaagtaaaatttgtttatatttcaaaacggagggagt 7256884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 34194646 - 34194705
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| ||||||    
T  34194646 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtaa 34194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 38884000 - 38883941
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| ||||||    
T  38884000 tcattaattgaatgaacctaaaaaataaaatttgcttatattttgaaacggagggagtaa 38883941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 5419569 - 5419511
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| |||||||||| ||||||   |||||||||||||||||||||||| || |||||    
T  5419569 tcattgattgaatgaacctaaaaaataaaatttgcttatatttaaaaacgaagggagta 5419511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 24726121 - 24726179
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   || ||||||||||||||| ||||||| ||||||    
T  24726121 tcattaattgaatgaacctaaaaagtaatatttgcttatatttagaaacggatagagta 24726179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 32480282 - 32480340
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  32480282 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 32480340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 37922898 - 37922956
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  37922898 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 37922956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 40802257 - 40802199
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||  |||||   |||||||||||||||||| |||||||| |||||    
T  40802257 tcattaattgaatgaacttaaaaagtaaaatttgcttatatttagaaacggagggagta 40802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 32484993 - 32484944
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||||||||   |||||||||||||||||  |||||||    
T  32484993 attaattgaatgaatctaaaaagtaaaatttgcttatattttgaaacgga 32484944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 44838828 - 44838777
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||||||||||| ||||||||| |||||  ||||||||||||||||||||||    
T  44838828 tcattaattgaataaatctaaaaagtcaat-tttgcttatatttaaaaacgga 44838777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 8e-17; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 40960831 - 40960883
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  40960831 attgaatgaatctaaaagtcaaaatttgcttatattaaaaaacggagggagta 40960883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 38190902 - 38190844
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||||| |||||||||||||||||||||| |||||||||| |||||    
T  38190902 tcattgattgaatgaatctgaaagtcaaaatttgcttatattaaaaaacggagggagta 38190844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 21909927 - 21909986
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    ||||||||||||| |||||||||   ||||||||||||||||||||||||||| ||||||    
T  21909927 tcattaattgaataaatctaaaaagtaaaatttgcttatatttaaaaacggagggagtaa 21909986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47011304 - 47011388
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| ||||||||||||||||| |||||    |||||||||||| ||||||   |||||||||||||||||||||| |||| |||||    
T  47011304 gtggtccatattataaatcacatacatcat----taattgaatgaacctaaaaagtaaaatttgcttatatttaaaaatggagggagta 47011388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 12030317 - 12030375
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| |||||||||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  12030317 tcattgattgaatgaacctaaaagtcaaaatttgtttatattaaaaaacggagggagta 12030375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24478725 - 24478808
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagt 88  Q
    ||||||||||||||||| |||||| |||||| |||||    |||||  |||||   ||||||||||||||||||||||||||||||||    
T  24478725 gtggtctatattataaaccacatacatcattaattaa----atgaacttaaaaagtaaaatttgcttatatttaaaaacggagagagt 24478808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 37255180 - 37255122
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||||| |||||    
T  37255180 tcattaattgaatgaatctaaaaagtaaaatttgcttatattaaaaaacggagggagta 37255122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 40328958 - 40329016
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||| |||||||||||||||||| |||||    
T  40328958 tcattaattgaatgaatctaaaaagtaaaatttgtttatatttaaaaacggagggagta 40329016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 49979964 - 49980022
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||||||||||||||||||||||||| || ||||| |||| |||||    
T  49979964 tcattgattgaatgaatctaaaagtcaaaatttgcttatgttaaaaaatggagggagta 49980022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 50144191 - 50144145
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  50144191 attaattgaatgaaactaaaagtcaaaatttgcttatattaaaaaac 50144145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 50144200 - 50144283
Alignment:
Q  2 tggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||||| ||| |||||    ||||| |||||||| |||||||||||||||| ||||| |||| |||||    
T  50144200 tggtctatattataaaccacatatattattaattaa----atgaacctaaaagttaaaatttgcttatattaaaaaatggagggagta 50144283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 35049986 - 35049934
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| |||||||||||||||| |||||| || |||||||||    
T  35049986 tcattaattgaatgaacctaaaagtcaaaatttacttataattgaaaacggag 35049934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38847362 - 38847446
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| |||||| ||||||    || |||||||| |||||| |||||  |||||||||||||||||||||||||||||    
T  38847362 gtggtctatattataaaccacatacatcatt----aaatgaatgaacctaaaaagtcaat-tttgcttatatttaaaaacggagagagta 38847446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 43384575 - 43384627
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||| |||||    
T  43384575 attgaatgaatctaaaagataaaatttgcttatattaaaaaacggagggagta 43384627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 49979936 - 49979884
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  49979936 tcattgattgaatgaatctaaaagttaaaatttacttatattaaaaaacggag 49979884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 38190934 - 38190985
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||| |||||||||| |||||| |||||||||||||||||| |||||||||    
T  38190934 tcattgattgaatgaacctaaaattcaaaatttgcttatattaaaaaacgga 38190985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 7230063 - 7230005
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||    || ||||||||||||||||||||||| |||||    
T  7230063 tcattaattgaatgaatctaaaaagttaattttgcttatatttaaaaacggagggagta 7230005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 25378343 - 25378401
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||||||||||||| ||||||||| |||||    
T  25378343 tcattaattgaatgaacctaaaaaataaaatttgcttatattttaaaacggagggagta 25378401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 34061997 - 34061939
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||| |||||||||||||||||| |||||    
T  34061997 tcattaattgaatgaacctaaaaagtaaaatttgtttatatttaaaaacggagggagta 34061939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 38824377 - 38824435
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||| ||||||||| |||||||| |||||    
T  38824377 tcattaattgaatgaatctaaaacgtaaaatttgtttatatttagaaacggagggagta 38824435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 52253611 - 52253540
Alignment:
Q  8 atattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||| ||||||    |||||||||||| |||||   |||||||||||||||||| ||||||||    
T  52253611 atattataaatcacatacatcatt----aattgaatgaatataaaaagtaaaatttgcttatatttagaaacggag 52253540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 52253624 - 52253682
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| |||||   ||||||| ||||||||||||||||||| |||||    
T  52253624 tcattaattgaatgaatttaaaaaataaaatttacttatatttaaaaacggagggagta 52253682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 40328921 - 40328869
Alignment:
Q  31 tcattaattgaatgaatcta-aaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  40328921 tcattaattgaatgaacctataaagt-aaaatttgcttatatttaaaaacggag 40328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 8751486 - 8751434
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| ||||||   ||||||||||||||||| |||||||||    
T  8751486 tcattaattgaatgaacctaaaaaataaaatttgcttatattttaaaacggag 8751434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 9380840 - 9380792
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||||| ||||||| | ||||||||||||| ||||||||    
T  9380840 tcattaattgaatgaacctaaaagccgaaatttgcttataattaaaaac 9380792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31909809 - 31909886
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||||||||||||||| |||||| |||||    |||||||||||| ||||||   |||||||||||||||||  |||||||    
T  31909809 gtggtctatattataaaccacatacatcat----taattgaatgaacctaaaaaataaaatttgcttatattttgaaacgga 31909886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38824371 - 38824294
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||| || |||||| ||||||    |||||||||||  |||||   ||||||||||||||||||||||||||    
T  38824371 gtggtctatattatgaaccacatacatcatt----aattgaatgaacataaaaaataaaatttgcttatatttaaaaacgga 38824294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 43020386 - 43020334
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||| |||| |||||| |||||| |||||||||||||||| ||||||||||||    
T  43020386 tcataaatttaatgaacctaaaaatcaaaatttgcttataattaaaaacggag 43020334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 52879938 - 52879894
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaa 75  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  52879938 tcattaattgaatgaatctaaaaaactaaatttgcttatatttaa 52879894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5852768 - 5852684
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| |||||||||| |||||| ||||||    ||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  5852768 gtggtccatattataaaccacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 5852684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 40341816 - 40341874
Alignment:
Q  31 tcattaattgaatgaatcta-aaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| |||||||||| ||||| |||||||| |||||||||||||||||| |||||    
T  40341816 tcattaattaaatgaatctataaagt-aaaatttgtttatatttaaaaacggagggagta 40341874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46518005 - 46518089
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| |||||||||| |||||| |||||    |||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  46518005 gtggtccatattataaaccacatacatcat----taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 46518089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 3141042 - 3141096
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagag 85  Q
    ||||||||| ||| || |||| || ||||||||| ||||||||||||||||||||    
T  3141042 tcattaattaaataaacctaatagacaaaatttgtttatatttaaaaacggagag 3141096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 4838365 - 4838307
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||| ||||||||| |||||||| |||||    
T  4838365 tcattaattgaatgaacctaaaaagtaaaatttgtttatatttagaaacggagggagta 4838307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 6763420 - 6763478
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  6763420 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 6763478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 8751518 - 8751576
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||||||||||||| |||| |||| |||||    
T  8751518 tcattaattgaatgaacctaaaaaataaaatttgcttatattttaaaatggagggagta 8751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 13219471 - 13219413
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||  ||||||| |||||||||||||||| |||||| ||| |||||    
T  13219471 tcattgattgaatgaacttaaaagttaaaatttgcttatattaaaaaacagagggagta 13219413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 15013709 - 15013652
Alignment:
Q  33 attaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    ||||||||||||||||||||| |||||| ||| |||||| || ||||||||||||||||    
T  15013709 attaattgaatgaatctaaaaagtcaaa-tttacttataattgaaaacggagagagtaa 15013652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 16426994 - 16427052
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||||||||||    || ||||||||||||||||||||||| |||||    
T  16426994 tcattaaatgaatgaatctaaaaaatcaattttgcttatatttaaaaacggagggagta 16427052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 17988276 - 17988226
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgg 81  Q
    |||||||||||||||| ||||||   ||||||||||||||||| |||||||    
T  17988276 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacgg 17988226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 37255212 - 37255270
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   || ||||||||||||||| |||||||| |||||    
T  37255212 tcattaattgaatgaacctaaaaagtaatatttgcttatatttagaaacggagggagta 37255270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 39181103 - 39181061
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatattt 73  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  39181103 tcattaattgaatgaatctaaaaagtaaaatttgcttatattt 39181061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 40341784 - 40341726
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||| ||||||||| |||||||| |||||    
T  40341784 tcattaattgaatgaacctaaaatgtaaaatttgtttatatttagaaacggagggagta 40341726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 46812987 - 46813045
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| |||||   |||||||| ||||||||| |||||||| |||||    
T  46812987 tcattaattgaatgaatttaaaaaataaaatttgtttatatttacaaacggagggagta 46813045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 49363470 - 49363528
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||| ||||||||||| ||||||   ||||||||||||||||| ||||||||| |||||    
T  49363470 tcatcaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagggagta 49363528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 13219505 - 13219546
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatt 72  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||    
T  13219505 tcattgattgaataaatttaaaagtcaaaatttgcttatatt 13219546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 27146110 - 27146170
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagtaaa 91  Q
    ||||||| |||||||| |||||| |||||  ||||||||||||||||||||||| |||||||    
T  27146110 tcattaaatgaatgaacctaaaaagtcaat-tttgcttatatttaaaaacggagggagtaaa 27146170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 48376893 - 48376948
Alignment:
Q  33 attaattgaatgaatct-aaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||||    
T  48376893 attaattgaatgaatctaaaaagtc-aaatttgcttatatttagaaac-gagagagta 48376948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 4974131 - 4974190
Alignment:
Q  31 tcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    ||||||| ||||||||||||||| |||||  |||||||||||| |||||||||| ||||||    
T  4974131 tcattaaatgaatgaatctaaaaagtcaat-tttgcttatattaaaaaacggagggagtaa 4974190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16426988 - 16426904
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| ||||||| ||||||||| ||||||    || ||||||||||||||| |||||  |||||||||||||| |||||||| |||||    
T  16426988 gtggtccatattattaatcacatacatcatt----aaatgaatgaatctaaaaagtcaat-tttgcttatatttagaaacggagggagta 16426904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 23392627 - 23392675
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||| |||||||||||||   |||||||||||||| ||||||||||||    
T  23392627 taattaaatgaatctaaaaagtaaaatttgcttataattaaaaacggag 23392675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 43020421 - 43020477
Alignment:
Q  34 ttaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||  ||||||| ||||||| |||||| ||||||| |||| ||||||    
T  43020421 ttaattgaatgaacttaaaagttaaaatttacttataattaaaaaaggagggagtaa 43020477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3474 - 3558
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| |||||| |||||| |||||| |||    ||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  3474 gtggtctataatataaaccacatacatcattgatt----gaatgaatctaaaagtcaaaatttgcttatattaaaaaacagagggagta 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 3468 - 3410
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  3468 tcattgattgaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagggagta 3410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31549853 - 31549937
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||| |||||| |||||| |||    ||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  31549853 gtggtttatattataaaccacatacatcattgatt----gaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagggagta 31549937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39970237 - 39970153
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| |||||| |||||| |||||| |||    ||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  39970237 gtggtctataatataaaccacatacatcattgatt----gaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagggagta 39970153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 40211206 - 40211155
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  40211206 tcattgattgaatgaatctaaaagtcaaaatttgcttatattaaaaaacgga 40211155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 32941863 - 32941921
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  32941863 tcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagggagta 32941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 1741934 - 1741882
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  1741934 tcattaattgaatgaacctaaaagtcaaaatttgcttataattaacaacggag 1741882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 3838211 - 3838263
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  3838211 attgaatgaatctaaaagtcaaaatttgtttatattaaaaaacggagggagta 3838263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 40211244 - 40211296
Alignment:
Q  37 attgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  40211244 attgaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagggagta 40211296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 45833276 - 45833328
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  45833276 tcattaattgaatgaatctaaaaagtaaaatttgcttatatttaaaaacggag 45833328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 3838198 - 3838115
Alignment:
Q  2 tggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||| ||||||||||||| |||||| |||    ||||||| |||||||| |||||||||||||||| ||||| |||| |||||    
T  3838198 tggtctataatataaatcacatacatcattgatt----gaatgaacctaaaagttaaaatttgcttatattaaaaaatggagggagta 3838115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 5691562 - 5691620
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| |||||   ||||||||||||||||||||||||||| |||||    
T  5691562 tcattaattgaatgaatttaaaatgtaaaatttgcttatatttaaaaacggagtgagta 5691620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 31549847 - 31549789
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||| |||| |||||    
T  31549847 tcattgattgaatgaacctaaaagtcaaaatttgcttatattaaaaaatggagggagta 31549789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 46658786 - 46658728
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||||||||||||| |||||||||||||||    
T  46658786 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagagagta 46658728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 46658818 - 46658876
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||||| |||||    
T  46658818 tcattaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagggagta 46658876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3498374 - 3498296
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||| |||||||||| |||||| ||||||    ||||||||||||||||||   ||||||||||||||||| |||||||||    
T  3498374 gtggtccatattataaaccacatacatcatt----aattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggag 3498296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 32389228 - 32389148
Alignment:
Q  8 atattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaaa 91  Q
    |||||||||| |||||| |||||| |||||   |||||| ||||||   |||||||||||||||||||||||||| ||||||||    
T  32389228 atattataaaccacatacatcattaattaa---aatgaacctaaaatataaaatttgcttatatttaaaaacggaaagagtaaa 32389148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 41095246 - 41095194
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||| |||||||||||||||||||||| || |||| ||||    
T  41095246 tcattaattgaatgaatttaaaagtcaaaatttgcttataatttaaaatggag 41095194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 47778481 - 47778437
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaa 77  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  47778481 attaattgaatgaacctaaaagtcaaaatttgtttatatttaaaa 47778437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 20353111 - 20353060
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  20353111 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacgga 20353060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28003238 - 28003322
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| ||||||||||||||||| |||||    |||||||||||| ||||||   |||||||||||||||||  |||||||| |||||    
T  28003238 gtggtccatattataaatcacatacatcat----taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 28003322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 37066268 - 37066327
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||| ||||||   ||||||||||||||||| ||||||||| ||||||    
T  37066268 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagggagtaa 37066327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 7344984 - 7345042
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   |||||||||||||||||| |||||||| |||||    
T  7344984 tcattaattgaatgaaactaaaaagtaaaatttgcttatatttagaaacggagggagta 7345042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 20353163 - 20353221
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||   |||||||| ||||||||| |||||||| |||||    
T  20353163 tcattaattgaatgaatctaaaaagtaaaatttgattatatttagaaacggagggagta 20353221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 32389241 - 32389299
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||| |||||  |||||||| |||||||||||||||||| ||||||    
T  32389241 tcatttattgaatgaatttaaaaagcaaaatttacttatatttaaaaacggaaagagta 32389299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 47778515 - 47778553
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttat 69  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  47778515 tcattaattgaatgaatttaaaagtcaaaatttgcttat 47778553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 48135520 - 48135462
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  48135520 tcattaaatgaatgaatctaaaaagtaaaatttgcttatatttaaatacggagggagta 48135462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 16086290 - 16086346
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||| ||||||   ||||||||||||||||| || ||||||||||||    
T  16086290 attaattgaatgaacctaaaaaataaaatttgcttatattttaagacggagagagta 16086346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 43232951 - 43232999
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaac 79  Q
    |||||||||||||||| ||||||   |||||||||||||||||||||||    
T  43232951 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaac 43232999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 45833244 - 45833192
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| ||||||   |||||||| ||||||||||||||||||    
T  45833244 tcattaattgaatgaacctaaaaagtaaaatttgtttatatttaaaaacggag 45833192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 46578351 - 46578403
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| ||||||   ||||||||||||||||| |||||||||    
T  46578351 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggag 46578403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 13846764 - 13846713
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   ||||||| ||||||||||||||||||    
T  13846764 tcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacgga 13846713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 18732266 - 18732216
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| |||||||| |||||||  |||||||||||||||||    
T  18732266 tcattaattgaatgaacctaaaagt-aaaatttatttatatttaaaaacgga 18732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 27940799 - 27940748
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||||| ||||||   ||||||||||||||||| ||||||||    
T  27940799 tcattaattgaatgaacctaaaaaataaaatttgcttatattttaaaacgga 27940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 36427753 - 36427804
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    |||||||||||||| |||||||| | |||||||| ||||| |||||||||||    
T  36427753 tcattaattgaatgtatctaaaaattaaaatttgtttataattaaaaacgga 36427804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 37668007 - 37668065
Alignment:
Q  31 tcattaattgaatgaatctaa-aagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| ||| |||| ||||||| |||||||||||||||||| ||||||    
T  37668007 tcattaattgaatgaatttaagaagt-aaaatttacttatatttaaaaacggatagagta 37668065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 46471006 - 46470947
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||||||||||||   |||||||| ||||||||  |||||||| ||||||    
T  46471006 tcattaattgaatgaatctaaaacctaaaatttgtttatattttgaaacggagggagtaa 46470947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 46774605 - 46774660
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||| |||||||  ||||||| |||||||||| |||||||| ||||||    
T  46774605 taattgaatgaacctaaaaggtaaaatttacttatatttagaaacggagggagtaa 46774660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 3498380 - 3498438
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||| ||||||||| ||||| |||||||||    
T  3498380 tcattaattgaatgaacctaaaaagtaaaatttacttatattttaaaacagagagagta 3498438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 24936735 - 24936677
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| | |||||||||||||    || |||||||||||||||||||||||||||||    
T  24936735 tcattaaataaatgaatctaaaaaatcaattttgcttatatttaaaaacggagagagta 24936677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 28003228 - 28003174
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||| ||||||   ||||||||||||||||| ||||||||| |||||    
T  28003228 taattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagggagta 28003174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 33471544 - 33471502
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatattt 73  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  33471544 tcattaattgaatgaatctaaaaaataaaatttgcttatattt 33471502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 33471576 - 33471634
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| ||||||   ||||||| |||||||||  ||||||||||||||    
T  33471576 tcattaattgaatgaacctaaaaaataaaatttacttatattttgaaacggagagagta 33471634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 36711593 - 36711535
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||| | ||||   |||||||||||||||||||||| |||| |||||    
T  36711593 tcattaattgaatgaaccgaaaaagtaaaatttgcttatatttaaaaatggagggagta 36711535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 39970243 - 39970301
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||| ||||||||||| ||||| | |||||||| ||||||| |||||||||| |||||    
T  39970243 tcattgattgaatgaatttaaaaattaaaatttgtttatattaaaaaacggagggagta 39970301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 19532007 - 19531954
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggaga 84  Q
    |||||||||||||||| ||||||   |||||||||||||||||  |||||||||    
T  19532007 tcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggaga 19531954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 46477213 - 46477135
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||| |||||||||| |||||| ||||||    ||||||||||| ||||||   ||||||||||||||||| |||| ||||    
T  46477213 gtggtccatattataaaccacatacatcatt----aattgaatgaacctaaaaagtaaaatttgcttatattttaaaatggag 46477135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 48392946 - 48392868
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||| |||||||| ||||||||| |||| | |||||    ||||||||||||   |||||||||||||| ||||||||||||    
T  48392946 gtggtatatattatgaatcacatacatcactaattaa----atgaatctaaaaagtaaaatttgcttataattaaaaacggag 48392868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 1565497 - 1565549
Alignment:
Q  30 ttcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacgga 82  Q
    ||||||||||||||||| ||||||   ||| |||||||||||||| |||||||    
T  1565497 ttcattaattgaatgaacctaaaaaataaattttgcttatatttataaacgga 1565549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 25270609 - 25270641
Alignment:
Q  57 aaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||||||||||||| |||||    
T  25270609 aaaatttgcttatatttaaaaacggagggagta 25270641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 31671052 - 31670996
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||  |||||   ||||||| ||||||||||||||||||| |||||    
T  31671052 attaattgaatgaacataaaaagtaaaatttacttatatttaaaaacggagggagta 31670996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 33784114 - 33784062
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||| |||||   ||||||| ||||||||| |||||||||    
T  33784114 tcattaattgaatgaatttaaaaagtaaaatttacttatattttaaaacggag 33784062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 38391903 - 38391955
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||| |||||| ||||||   |||||||||||||||||| ||||||||    
T  38391903 tcattaattaaatgaacctaaaatgtaaaatttgcttatatttagaaacggag 38391955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17494 - 17578
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaa-gtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| |||||| ||||||    || |||||||| |||||| |||||  |||||||||||||||||||||||||||||    
T  17494 gtggtctatattataaaccacatacatcatt----aaatgaatgaacctaaaaagtcaat-tttgcttatatttaaaaacggagagagta 17578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 108050 - 108102
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||| |||||||||||||||||||||| || |||| ||||    
T  108050 tcattaattgaatgaatttaaaagtcaaaatttgcttataatttaaaatggag 108102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5448 - 5532
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| |||||| |||||| |||||    ||||||||||||   ||||||| |||||||||| |||||||| |||||    
T  5448 gtggtctatattataaaccacatacatcattaattaa----atgaatctaaaatgtaaaattttcttatatttagaaacggagggagta 5532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.00000000008; HSPs: 4)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 38403 - 38461
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||||||||||||| ||||||| ||| |||||||||||| |||||| ||| |||||    
T  38403 tcattaattgaatgaatttaaaagttaaattttgcttatattaaaaaacagagggagta 38461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38087 - 38002
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    |||||||||||||| || |||||| ||||||    | ||||||||| |||| |   ||||||||||||||||||||||||||| ||||||    
T  38087 gtggtctatattatgaaccacatacatcatt----agttgaatgaacctaacaaataaaatttgcttatatttaaaaacggagggagtaa 38002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 38388 - 38332
Alignment:
Q  33 attaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||| |||||||| |||||||||||||| | ||||| |||| |||||    
T  38388 attaattgaatgaacctaaaagtgaaaatttgcttatagtaaaaaatggagggagta 38332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 38093 - 38145
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    |||||||||||||||| ||||||   |||||||||||||||||| ||| ||||    
T  38093 tcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaatggag 38145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 239 - 323
Alignment:
Q  1 gtggtctatattataaatcacatatatcattcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    |||||| |||||||||| |||||| |||||    |||||||||||| ||||||   |||||||||||||||||  ||| ||||||||||    
T  239 gtggtccatattataaaccacatacatcat----taattgaatgaacctaaaaagtaaaatttgcttatattttgaaatggagagagta 323  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 65974 - 65916
Alignment:
Q  31 tcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggagagagta 89  Q
    ||||||| |||||||||||||||   ||| |||||||||||||||| |||||| |||||    
T  65974 tcattaaatgaatgaatctaaaaagtaaattttgcttatatttaaatacggagggagta 65916  T

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Target: scaffold0287 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 1882 - 1837
Alignment:
Q  38 ttgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||||||||||||||   ||||||||||||||||| |||||||||    
T  1882 ttgaatgaatctaaaaagtaaaatttgcttatattttaaaacggag 1837  T

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Target: scaffold1786 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 560 - 512
Alignment:
Q  35 taattgaatgaatctaaaagtcaaaatttgcttatatttaaaaacggag 83  Q
    ||||| |||||||||||||   |||||||||||||| ||||||||||||    
T  560 taattaaatgaatctaaaaagtaaaatttgcttataattaaaaacggag 512  T

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Target: scaffold0280 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 89
Target Start/End: Complemental strand, 13561 - 13533
Alignment:
Q  61 tttgcttatatttaaaaacggagagagta 89  Q
    |||||||||||||||||||||||||||||    
T  13561 tttgcttatatttaaaaacggagagagta 13533  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 22498 - 22439
Alignment:
Q  31 tcattaattgaatgaatcta-aaagtcaaaatttgcttatatttaaaaacggagagagtaa 90  Q
    ||||||| |||||||| ||| ||||||||  ||||||||||||||||||||||| ||||||    
T  22498 tcattaagtgaatgaacctacaaagtcaat-tttgcttatatttaaaaacggagggagtaa 22439  T

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