View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8325_high_5 (Length: 385)
Name: NF8325_high_5
Description: NF8325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8325_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 16 - 372
Target Start/End: Original strand, 44461541 - 44461897
Alignment:
| Q |
16 |
gatttggcaattatagcactaagagttgctgctagaaatgcttctgcaatgttaaacgacgtgaaatcaatgattgatgatgctaatttagaccctgaag |
115 |
Q |
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| T |
44461541 |
gatttggcaattatagcactaagagttgctgctagaaatgcttctgcaatgttaaacgacgtgaaatcaatgattgatgatgctaatttagaccctgaag |
44461640 |
T |
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| Q |
116 |
ttcaacaaggtttggctgattgcaaagaaaatatattggatgctgagtctcaacttgaagacactattgctgctttgttggttgaatctgatgttgatag |
215 |
Q |
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| T |
44461641 |
ttcaacaaggtttggctgattgcaaagaaaatatattggatgctgagtctcaacttgaagacactattgctgctttgttggttgaatctgatgttgatag |
44461740 |
T |
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| Q |
216 |
tcagaaatggttgaaggctgctttggctgctattactacctgcgataattctattcctggaaatgatgatgttttgtctgtcaagagtagaaccttccgc |
315 |
Q |
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| T |
44461741 |
tcagaaatggttgaaggctgctttggctgctattactacctgcgataattctattcctggaaatgatgatgttttgtctgtcaagagtagaatcttccgc |
44461840 |
T |
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| Q |
316 |
agactcaccaacattgttgttcttattaccagggccttgcctaaacgtacttcttct |
372 |
Q |
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| T |
44461841 |
agactcaccaacattgttgttcttattaccagggccttgcctaaacgtactccttct |
44461897 |
T |
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