View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8325_low_2 (Length: 517)

Name: NF8325_low_2
Description: NF8325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8325_low_2
NF8325_low_2
[»] chr3 (18 HSPs)
chr3 (10-219)||(35221235-35221440)
chr3 (401-456)||(35222332-35222387)
chr3 (317-363)||(35221533-35221579)
chr3 (345-394)||(19012558-19012607)
chr3 (341-394)||(49053220-49053273)
chr3 (339-394)||(20127169-20127224)
chr3 (347-394)||(27437833-27437880)
chr3 (467-497)||(35222405-35222435)
chr3 (345-394)||(8036799-8036848)
chr3 (341-394)||(12974007-12974060)
chr3 (269-298)||(35221493-35221522)
chr3 (341-394)||(36185721-36185774)
chr3 (345-394)||(36185901-36185950)
chr3 (345-394)||(38345279-38345328)
chr3 (345-394)||(49053422-49053471)
chr3 (345-394)||(50416479-50416528)
chr3 (345-394)||(50416560-50416609)
chr3 (340-388)||(19384375-19384423)
[»] chr7 (12 HSPs)
chr7 (340-394)||(44426795-44426849)
chr7 (345-394)||(5728876-5728925)
chr7 (349-394)||(32604724-32604769)
chr7 (341-394)||(41065763-41065816)
chr7 (345-391)||(34227875-34227921)
chr7 (345-394)||(46004531-46004580)
chr7 (337-388)||(45478516-45478567)
chr7 (345-394)||(924496-924545)
chr7 (345-394)||(26945513-26945562)
chr7 (345-394)||(26945710-26945759)
chr7 (341-394)||(34227671-34227724)
chr7 (345-394)||(44426597-44426646)
[»] chr1 (20 HSPs)
chr1 (340-394)||(18928951-18929005)
chr1 (340-394)||(32595098-32595152)
chr1 (340-394)||(42134129-42134183)
chr1 (345-390)||(12070610-12070655)
chr1 (345-394)||(14229357-14229406)
chr1 (345-394)||(17893269-17893318)
chr1 (342-394)||(17811279-17811331)
chr1 (346-394)||(49992714-49992762)
chr1 (345-388)||(23174401-23174444)
chr1 (339-394)||(33156985-33157040)
chr1 (340-394)||(9041047-9041101)
chr1 (345-391)||(10974632-10974678)
chr1 (345-391)||(14229171-14229217)
chr1 (340-394)||(46590552-46590606)
chr1 (345-394)||(1395347-1395396)
chr1 (343-388)||(9628601-9628646)
chr1 (341-394)||(17893067-17893120)
chr1 (341-394)||(29945412-29945465)
chr1 (341-394)||(45849103-45849156)
chr1 (339-391)||(31763768-31763820)
[»] chr8 (10 HSPs)
chr8 (345-394)||(34343447-34343496)
chr8 (340-394)||(15808879-15808933)
chr8 (345-394)||(34343248-34343297)
chr8 (346-394)||(23567639-23567687)
chr8 (345-394)||(10586057-10586106)
chr8 (345-394)||(15809836-15809885)
chr8 (345-394)||(17792888-17792937)
chr8 (345-394)||(23347717-23347766)
chr8 (345-394)||(35448606-35448655)
chr8 (346-394)||(24473240-24473288)
[»] chr6 (9 HSPs)
chr6 (337-394)||(19281274-19281331)
chr6 (341-394)||(20522664-20522717)
chr6 (345-394)||(25119105-25119154)
chr6 (345-394)||(7371094-7371143)
chr6 (345-394)||(22857487-22857536)
chr6 (345-394)||(22857673-22857722)
chr6 (345-391)||(10588952-10588998)
chr6 (345-394)||(21384788-21384837)
chr6 (341-394)||(25066204-25066257)
[»] chr5 (14 HSPs)
chr5 (345-394)||(39086516-39086565)
chr5 (340-394)||(7286747-7286801)
chr5 (345-394)||(5411752-5411801)
chr5 (345-394)||(39166336-39166385)
chr5 (347-394)||(23155526-23155573)
chr5 (341-388)||(35662235-35662282)
chr5 (343-394)||(42746839-42746890)
chr5 (345-394)||(3340589-3340638)
chr5 (345-394)||(11660792-11660841)
chr5 (345-394)||(15559048-15559097)
chr5 (345-394)||(16552246-16552295)
chr5 (341-394)||(36864264-36864317)
chr5 (345-394)||(39861776-39861825)
chr5 (346-394)||(11660978-11661026)
[»] chr4 (22 HSPs)
chr4 (345-394)||(9813141-9813190)
chr4 (339-394)||(12722934-12722989)
chr4 (339-394)||(25715723-25715778)
chr4 (341-388)||(36309619-36309666)
chr4 (341-391)||(2124339-2124389)
chr4 (345-394)||(2124541-2124590)
chr4 (345-394)||(6841820-6841869)
chr4 (345-394)||(31763104-31763153)
chr4 (341-394)||(53865239-53865292)
chr4 (345-394)||(54895403-54895452)
chr4 (345-375)||(9967885-9967915)
chr4 (344-394)||(31762927-31762977)
chr4 (342-388)||(33819687-33819733)
chr4 (340-394)||(37059911-37059965)
chr4 (345-394)||(562774-562823)
chr4 (345-394)||(8165761-8165810)
chr4 (345-394)||(33883293-33883342)
chr4 (341-394)||(37059706-37059759)
chr4 (341-394)||(41025056-41025109)
chr4 (345-394)||(43375517-43375566)
chr4 (345-390)||(53526452-53526497)
chr4 (346-394)||(38010706-38010754)
[»] chr2 (18 HSPs)
chr2 (341-394)||(16111701-16111754)
chr2 (345-394)||(42364491-42364540)
chr2 (339-394)||(37867351-37867406)
chr2 (345-394)||(15150287-15150336)
chr2 (341-394)||(30777290-30777343)
chr2 (345-394)||(34726792-34726841)
chr2 (349-389)||(16111516-16111556)
chr2 (339-394)||(19246655-19246710)
chr2 (345-392)||(24183595-24183642)
chr2 (339-394)||(44915487-44915542)
chr2 (345-394)||(12449053-12449102)
chr2 (345-394)||(12449239-12449288)
chr2 (345-394)||(25575322-25575371)
chr2 (345-394)||(31783792-31783841)
chr2 (345-394)||(37867153-37867202)
chr2 (341-394)||(42364689-42364742)
chr2 (345-394)||(44915290-44915339)
chr2 (346-394)||(20661591-20661639)
[»] scaffold0129 (1 HSPs)
scaffold0129 (345-394)||(20116-20165)
[»] scaffold0031 (1 HSPs)
scaffold0031 (345-394)||(80863-80912)
[»] scaffold0664 (1 HSPs)
scaffold0664 (340-394)||(3150-3204)
[»] scaffold0102 (1 HSPs)
scaffold0102 (338-388)||(33608-33658)
[»] scaffold0516 (1 HSPs)
scaffold0516 (345-394)||(1244-1293)
[»] scaffold0249 (1 HSPs)
scaffold0249 (345-394)||(23543-23592)
[»] scaffold0004 (1 HSPs)
scaffold0004 (348-388)||(96001-96041)


Alignment Details
Target: chr3 (Bit Score: 161; Significance: 1e-85; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 10 - 219
Target Start/End: Original strand, 35221235 - 35221440
Alignment:
Q  10 tacattattcttagtattatagaaaaataatataatcggtaatattaagtgatatttacatcaactaattggattcaggtggttaatgaattaatttcat 109  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    ||||    
T  35221235 tacattattcttagtattatagaaaaataatataatcagtaatattaagtgatatttacatcaactaattggatttaggtggttaatgaatt----tcat 35221330  T
Q  110 caaaaatgaactgtttaggaaaacgttcaatatttgaataagataattattggtgaaactttagttcctctgaaaacctaatgaataataactaatgtaa 209  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||    
T  35221331 caaaaatgaaccgtttaggaaaacgttcaatatttgaataaaataattattgatcaaactttagttcctctaaaaacctaatgaataataactaatgcaa 35221430  T
Q  210 ttggtttcct 219  Q
    ||||||||||    
T  35221431 ttggtttcct 35221440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 401 - 456
Target Start/End: Original strand, 35222332 - 35222387
Alignment:
Q  401 cctgtaaggaagtggtaggagttcgatcccttgttatcgcacatggaagaaagaaa 456  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  35222332 cctgtaagtgagtggtaggagttcgatcccttgttatcgcacatggaagaaagaaa 35222387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 363
Target Start/End: Original strand, 35221533 - 35221579
Alignment:
Q  317 atataagcttgttcattaagtgaggggcgcggttatggtgcataaga 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35221533 atataagcttgttcattaagtgaggggcgcggttatggtgcataaga 35221579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 19012607 - 19012558
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||| |||||| |||||||||||| |||||    
T  19012607 gcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaa 19012558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 49053220 - 49053273
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||| ||||||||||||||| ||||| |||||| ||| ||||||||||||||    
T  49053220 gggcgcagttatggtgcataaggaaattcttatgcacccggcataaattcagaa 49053273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 394
Target Start/End: Complemental strand, 20127224 - 20127169
Alignment:
Q  339 aggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||| |||| |||| |||||||||||||  |||||| ||||||||||||||||||    
T  20127224 aggggtgcggctatgatgcataagaaaatccttatgcaccctgcataaattcagaa 20127169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 394
Target Start/End: Original strand, 27437833 - 27437880
Alignment:
Q  347 ggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||| ||||| |||||||||||| || |||||||||||||||    
T  27437833 ggttatggtgtataaggaaatttttatgcaccatgcataaattcagaa 27437880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 497
Target Start/End: Original strand, 35222405 - 35222435
Alignment:
Q  467 caattgcaagggaaaatctaaccttgtcggt 497  Q
    |||||||||||||||||||||||||||||||    
T  35222405 caattgcaagggaaaatctaaccttgtcggt 35222435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 8036799 - 8036848
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  8036799 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 8036848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 12974007 - 12974060
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||| ||||  |||||| |||||| ||||| |||||    
T  12974007 gggcgcggttatggtgcataaggaaatccttatgcaccctgcctaaatccagaa 12974060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 298
Target Start/End: Original strand, 35221493 - 35221522
Alignment:
Q  269 ctcaagtaataataatttaggccttctccc 298  Q
    ||||||||||||||||||||||||||||||    
T  35221493 ctcaagtaataataatttaggccttctccc 35221522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 36185721 - 36185774
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||| ||||  ||||||  ||||||||||| |||||    
T  36185721 gggcgcggttatggtgcataaggaaatccttatgcatcctgcataaatccagaa 36185774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 36185950 - 36185901
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  36185950 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 36185901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 38345279 - 38345328
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||  |||| ||||||| |||||||||||| |||||    
T  38345279 gcggttatggtgcataaagaaatctttatgcaccctgcataaatccagaa 38345328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 49053471 - 49053422
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| |||| ||||| | |||||||||||| |||||    
T  49053471 gcggttatggtgcataaggaaatctttatccaccctgcataaatccagaa 49053422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 50416479 - 50416528
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  50416479 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 50416528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 50416609 - 50416560
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  50416609 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 50416560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 19384375 - 19384423
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaat 388  Q
    |||| |||||||||||||||||| ||||| |||||| || |||||||||    
T  19384375 ggggagcggttatggtgcataaggaaattcttatgcaccgtgcataaat 19384423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 44426849 - 44426795
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||    
T  44426849 ggggcgcggttatggtgcataaggaaatctttatgcaccctgcataaatccagaa 44426795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 5728925 - 5728876
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  5728925 gcggttatggtgcataagaaaattcttatgcaccctgcataaatccagaa 5728876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 394
Target Start/End: Original strand, 32604724 - 32604769
Alignment:
Q  349 ttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  32604724 ttatggtgcataagaaaatctttatgcaccctgcataaattcagaa 32604769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 41065763 - 41065816
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||| ||||    
T  41065763 gggcgcggttatggtgcataagaaaatctttatgcatcctgcataaatttagaa 41065816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 34227921 - 34227875
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattca 391  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||    
T  34227921 gcggttatggtgcataaggaaattcttatgcaccctgcataaattca 34227875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 46004580 - 46004531
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  46004580 gcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaa 46004531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Complemental strand, 45478567 - 45478516
Alignment:
Q  337 tgaggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaat 388  Q
    |||||||||||||||||||||||||||||||  ||||||  | |||||||||    
T  45478567 tgaggggcgcggttatggtgcataagaaaatccttatgcatcttgcataaat 45478516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 924496 - 924545
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| |||| ||||| | || |||||||||||||||    
T  924496 gcggttatggtgcataaggaaatctttatacaccttgcataaattcagaa 924545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 26945513 - 26945562
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||| |||||| ||||||||| || |||||    
T  26945513 gcggttatggtgcataaggaaattcttatgcaccctgcatatatccagaa 26945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 26945759 - 26945710
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  26945759 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 26945710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 34227671 - 34227724
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||| ||||  ||||||  ||||||||||| |||||    
T  34227671 gggcgcggttatggtgcataaggaaatccttatgcaacctgcataaatccagaa 34227724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 44426597 - 44426646
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  44426597 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 44426646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 18929005 - 18928951
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||    
T  18929005 ggggcgcggttatggtgcataaggaaatctttatgcaccctgcataaatccagaa 18928951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 394
Target Start/End: Original strand, 32595098 - 32595152
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||| |||||||||||||||||| ||||| |||||| |||||||||||| |||||    
T  32595098 ggggtgcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaa 32595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 42134183 - 42134129
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  42134183 ggggcgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 42134129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 12070655 - 12070610
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattc 390  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||    
T  12070655 gcggttatggtgcataaggaaattcttatgcaccctgcataaattc 12070610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 14229406 - 14229357
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| |||| ||||||| |||||||||||| |||||    
T  14229406 gcggttatggtgcataaggaaatctttatgcaccctgcataaatccagaa 14229357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 17893318 - 17893269
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  17893318 gcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaa 17893269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 17811331 - 17811279
Alignment:
Q  342 ggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||||||| ||||  |||||| ||||| ||||||||||||    
T  17811331 ggcgcggttatggtgcataaggaaatccttatgcaccctgtataaattcagaa 17811279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 49992762 - 49992714
Alignment:
Q  346 cggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||| |||||| ||||||| |||||| ||||||||||||||||||    
T  49992762 cggttatgatgcatatgaaaattcttatgcaccctgcataaattcagaa 49992714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 388
Target Start/End: Original strand, 23174401 - 23174444
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaat 388  Q
    |||||||||||||||||||||||| |||||| || |||||||||    
T  23174401 gcggttatggtgcataagaaaattcttatgcaccgtgcataaat 23174444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 394
Target Start/End: Original strand, 33156985 - 33157040
Alignment:
Q  339 aggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||| |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  33156985 aggggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 33157040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 9041101 - 9041047
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||| |||||||||||||||||| ||||  |||||| |||||||||| |||||||    
T  9041101 ggggtgcggttatggtgcataaggaaatccttatgcaccctgcataatttcagaa 9041047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 10974632 - 10974678
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattca 391  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||    
T  10974632 gcggttatggtgcataaggaaatccttatgcaccctgcataaattca 10974678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 14229171 - 14229217
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattca 391  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||    
T  14229171 gcggttatggtgcataaggaaatccttatgcaccctgcataaattca 14229217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 394
Target Start/End: Original strand, 46590552 - 46590606
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||| |||||||||||||||||||| ||||||  ||||||| ||| |||||    
T  46590552 ggggcgcgattatggtgcataagaaaattcttatgcatcctgcattaatccagaa 46590606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 1395396 - 1395347
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| || |||||||||||||||    
T  1395396 gcggttatggtgcataaggaaatccttatgcaccatgcataaattcagaa 1395347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 9628646 - 9628601
Alignment:
Q  343 gcgcggttatggtgcataagaaaatttttatgcgccctgcataaat 388  Q
    |||||||||||||||||||| ||||  |||||| ||||||||||||    
T  9628646 gcgcggttatggtgcataaggaaatccttatgcaccctgcataaat 9628601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 17893067 - 17893120
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||| |||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  17893067 gggcgtggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 17893120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 29945465 - 29945412
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||| ||||  |||||| | ||||||||||| ||||    
T  29945465 gggcgcggttatggtgcataaggaaatccttatgcactctgcataaatttagaa 29945412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 45849103 - 45849156
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||| |||||||||||||| ||||  |||||| |||||||||||| |||||    
T  45849103 gggcgcgattatggtgcataaggaaatccttatgcaccctgcataaatccagaa 45849156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 391
Target Start/End: Original strand, 31763768 - 31763820
Alignment:
Q  339 aggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattca 391  Q
    ||||| |||||||||||||||||| ||||  |||| | |||||||||||||||    
T  31763768 aggggtgcggttatggtgcataaggaaatccttatacaccctgcataaattca 31763820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 34343496 - 34343447
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  34343496 gcggttatggtgcataaggaaattattatgcaccctgcataaattcagaa 34343447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 394
Target Start/End: Original strand, 15808879 - 15808933
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||| |||||||||||||||||||||||  |||||| |||||||||||| |||||    
T  15808879 ggggtgcggttatggtgcataagaaaatccttatgcaccctgcataaatccagaa 15808933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 34343248 - 34343297
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| |||| ||||||| |||| |||||||||||||    
T  34343248 gcggttatggtgcataaggaaatctttatgcaccctacataaattcagaa 34343297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 23567687 - 23567639
Alignment:
Q  346 cggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||| ||||| |||||| |||||||||||| |||||    
T  23567687 cggttatggtgcataaggaaattcttatgcaccctgcataaatccagaa 23567639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 10586106 - 10586057
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||| |||||||| ||||  |||||| ||||||||||||||||||    
T  10586106 gcggttatgatgcataaggaaatccttatgcaccctgcataaattcagaa 10586057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 15809885 - 15809836
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||| |||||||||||||    
T  15809885 gcggttatggtgcataaggaaatccttatgcaccctccataaattcagaa 15809836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 17792937 - 17792888
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  17792937 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 17792888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 23347766 - 23347717
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||  |||||  |||||||||||| |||||    
T  23347766 gcggttatggtgcataagaaaatccttatgaaccctgcataaatccagaa 23347717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 35448655 - 35448606
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  35448655 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 35448606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 24473288 - 24473240
Alignment:
Q  346 cggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||| ||||  |||||| ||||| ||||||||||||    
T  24473288 cggttatggtgcataaggaaatccttatgcaccctgtataaattcagaa 24473240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 19281274 - 19281331
Alignment:
Q  337 tgaggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||||| ||||  || ||| ||||||||||||||||||    
T  19281274 tgaggggcgcggttatggtgcataaggaaatccttgtgcaccctgcataaattcagaa 19281331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 20522664 - 20522717
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  20522664 gggcgtggttatggtgcataaggaaatatttatgcaccctgcataaattcagaa 20522717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 25119105 - 25119154
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  25119105 gcggttatggtgcataaggaaattcttatgcaccctgcataaattcagaa 25119154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 7371143 - 7371094
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| |||||    
T  7371143 gcggttatggtgcataagaaaatctttatgcaccctgcttaaatccagaa 7371094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 22857487 - 22857536
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  22857487 gcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaa 22857536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 22857722 - 22857673
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||  |||||| |||||||||||| |||||    
T  22857722 gcggttatggtgcataagaaaatccttatgcaccctgcataaatccagaa 22857673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 10588998 - 10588952
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattca 391  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||    
T  10588998 gcggttatggtgcataaggaaatccttatgcaccctgcataaattca 10588952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 21384788 - 21384837
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||| ||||||  ||||||||||| |||||    
T  21384788 gcggttatggtgcataaggaaattcttatgcatcctgcataaatccagaa 21384837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 25066204 - 25066257
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||  ||||| ||||| |||||| ||||||||||||| ||||    
T  25066204 gggcgcggttatggtatataaggaaattcttatgcaccctgcataaatttagaa 25066257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 39086516 - 39086565
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  39086516 gcggttatggtgcataagaaaatccttatgcaccctgcataaattcagaa 39086565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 394
Target Start/End: Original strand, 7286747 - 7286801
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||| |||||||||||| ||||| |||| ||||||| ||||||||||||||||||    
T  7286747 ggggtgcggttatggtgtataaggaaatctttatgcaccctgcataaattcagaa 7286801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 5411801 - 5411752
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||| |||||| |||| |||||||||||||    
T  5411801 gcggttatggtgcataaggaaattcttatgcacccttcataaattcagaa 5411752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 39166385 - 39166336
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||  |||||| ||||||||||||| ||||    
T  39166385 gcggttatggtgcataagaaaatccttatgcaccctgcataaatttagaa 39166336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 394
Target Start/End: Original strand, 23155526 - 23155573
Alignment:
Q  347 ggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  23155526 ggttatggtgcataaggaaatccttatgcaccctgcataaattcagaa 23155573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 388
Target Start/End: Complemental strand, 35662282 - 35662235
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaat 388  Q
    |||||||||||||||||||||| ||||  |||||| ||||||||||||    
T  35662282 gggcgcggttatggtgcataaggaaatacttatgcaccctgcataaat 35662235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 42746890 - 42746839
Alignment:
Q  343 gcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||| || ||||| |||| ||||||| ||||||||||||||||||    
T  42746890 gcgcggttatgatgtataaggaaatctttatgcaccctgcataaattcagaa 42746839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 3340589 - 3340638
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||| ||||    
T  3340589 gcggttatggtgcataaggaaatccttatgcaccctgcataaatttagaa 3340638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 11660792 - 11660841
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||| |||||||||||||    
T  11660792 gcggttatggtgcataaggaaatccttatgcaccctacataaattcagaa 11660841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 15559048 - 15559097
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| || |||||||||||||||    
T  15559048 gcggttatggtgcataaggaaatccttatgcaccatgcataaattcagaa 15559097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 16552246 - 16552295
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||   ||||| ||||||||||||||||||    
T  16552246 gcggttatggtgcataaggaaatccgtatgcaccctgcataaattcagaa 16552295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 36864317 - 36864264
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||| ||||| ||||  |||||| | ||||||||||||||||    
T  36864317 gggcgcggttatggtgtataaggaaatccttatgcactctgcataaattcagaa 36864264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 39861825 - 39861776
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  39861825 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 39861776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 11661026 - 11660978
Alignment:
Q  346 cggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  11661026 cggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 11660978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 9813190 - 9813141
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  9813190 gcggttatggtgcataaggaaatctttatgcaccctgcataaattcagaa 9813141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 394
Target Start/End: Complemental strand, 12722989 - 12722934
Alignment:
Q  339 aggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||||||| |||||    
T  12722989 aggggtgcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaa 12722934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 394
Target Start/End: Complemental strand, 25715778 - 25715723
Alignment:
Q  339 aggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||| |||||||||||||||||||||||  |||||| |||||||||||| |||||    
T  25715778 aggggtgcggttatggtgcataagaaaatccttatgcaccctgcataaatccagaa 25715723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 388
Target Start/End: Complemental strand, 36309666 - 36309619
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaat 388  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||||    
T  36309666 gggcgcggttatggtgcataagaaaatccttatgcaccctgcataaat 36309619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 2124339 - 2124389
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattca 391  Q
    |||||||||||||||||||||| ||||  |||||| |||||||||||||||    
T  2124339 gggcgcggttatggtgcataaggaaatccttatgcaccctgcataaattca 2124389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 2124590 - 2124541
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||| |||||| |||||||||||| |||||    
T  2124590 gcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaa 2124541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 6841820 - 6841869
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  6841820 gcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaa 6841869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 31763153 - 31763104
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  31763153 gcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaa 31763104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 53865292 - 53865239
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  53865292 gggcgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 53865239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 54895403 - 54895452
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||  |||||| |||||||||||| |||||    
T  54895403 gcggttatggtgcataagaaaatccttatgcaccctgcataaatccagaa 54895452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 375
Target Start/End: Complemental strand, 9967915 - 9967885
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgc 375  Q
    |||||||||||||||||||||||||||||||    
T  9967915 gcggttatggtgcataagaaaatttttatgc 9967885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 344 - 394
Target Start/End: Original strand, 31762927 - 31762977
Alignment:
Q  344 cgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||||| ||||  ||||||  |||||||||||||||||    
T  31762927 cgcggttatggtgcataaggaaatccttatgcatcctgcataaattcagaa 31762977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 388
Target Start/End: Original strand, 33819687 - 33819733
Alignment:
Q  342 ggcgcggttatggtgcataagaaaatttttatgcgccctgcataaat 388  Q
    ||||||||||||||||||||| ||||  |||||| ||||||||||||    
T  33819687 ggcgcggttatggtgcataaggaaatccttatgcaccctgcataaat 33819733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 37059965 - 37059911
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||| ||| ||||||| |||||||||||  |||||| ||||||||||||||||||    
T  37059965 ggggtgcgattatggtacataagaaaatccttatgcaccctgcataaattcagaa 37059911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 562774 - 562823
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||   ||||| ||||||||||||||||||    
T  562774 gcggttatggtgcataaggaaatccctatgcaccctgcataaattcagaa 562823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 8165761 - 8165810
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  8165761 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 8165810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 33883293 - 33883342
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| ||||| ||||||||||||    
T  33883293 gcggttatggtgcataaggaaatccttatgcaccctgtataaattcagaa 33883342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 37059706 - 37059759
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||| ||||  |||||| || ||||||||| |||||    
T  37059706 gggcgcggttatggtgcataaggaaatccttatgcaccttgcataaatccagaa 37059759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 41025056 - 41025109
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||| |||||  ||||  |||||| ||||||||||||||||||    
T  41025056 gggcgcggttatggtacataatgaaatccttatgcaccctgcataaattcagaa 41025109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 43375566 - 43375517
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||| | ||||  |||||| ||||||||||||||||||    
T  43375566 gcggttatggtgcatacggaaatccttatgcaccctgcataaattcagaa 43375517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 53526497 - 53526452
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattc 390  Q
    |||||||||||||||||| ||||| |||||  ||||||||||||||    
T  53526497 gcggttatggtgcataaggaaattcttatgtaccctgcataaattc 53526452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 38010754 - 38010706
Alignment:
Q  346 cggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||| | ||||  |||||| ||||||||||||||||||    
T  38010754 cggttatggtgcatacggaaatccttatgcaccctgcataaattcagaa 38010706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 16111754 - 16111701
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||||| |||||    
T  16111754 gggcgcggttatggtgcataaggaaatctttatgcaccctgcataaatccagaa 16111701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 42364491 - 42364540
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  42364491 gcggttatggtgcataagaaaatccttatgcaccctgcataaattcagaa 42364540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 394
Target Start/End: Complemental strand, 37867406 - 37867351
Alignment:
Q  339 aggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||| |||||||||| ||||  |||||| ||||||||||||||||||    
T  37867406 aggggcgcggttacggtgcataaggaaatccttatgcaccctgcataaattcagaa 37867351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 15150336 - 15150287
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||  ||||||  |||||||||||||||||    
T  15150336 gcggttatggtgcataagaaaatccttatgcatcctgcataaattcagaa 15150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 30777290 - 30777343
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||||||| |||||  |||||| |||||||||||| |||||    
T  30777290 gggcgcggttatggtgcataaaaaaatccttatgcaccctgcataaatccagaa 30777343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 34726841 - 34726792
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||| |||||| |||||||||||| |||||    
T  34726841 gcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaa 34726792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 16111516 - 16111556
Alignment:
Q  349 ttatggtgcataagaaaatttttatgcgccctgcataaatt 389  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  16111516 ttatggtgcataagaaaattcttatgcaccctgcataaatt 16111556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 394
Target Start/End: Original strand, 19246655 - 19246710
Alignment:
Q  339 aggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||| || ||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  19246655 aggggtgcagttatggtgcataaggaaatccttatgcaccctgcataaattcagaa 19246710  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 24183642 - 24183595
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcag 392  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  24183642 gcggttatggtgcataaggaaatccttatgcaccctgcataaattcag 24183595  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 394
Target Start/End: Complemental strand, 44915542 - 44915487
Alignment:
Q  339 aggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||| |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  44915542 aggggtgcggttatggtgcataaggaaatgcttatgcaccctgcataaatccagaa 44915487  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 12449053 - 12449102
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| | ||||||||||||||||    
T  12449053 gcggttatggtgcataaggaaatccttatgcacactgcataaattcagaa 12449102  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 12449288 - 12449239
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| |||| ||||||| || |||||||||| ||||    
T  12449288 gcggttatggtgcataaggaaatctttatgcaccttgcataaatttagaa 12449239  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 25575322 - 25575371
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  ||||||  |||||||||||||||||    
T  25575322 gcggttatggtgcataaggaaatccttatgcatcctgcataaattcagaa 25575371  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 31783792 - 31783841
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  31783792 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 31783841  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 37867153 - 37867202
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||| | ||||||||||||||||||    
T  37867153 gcggttatggtgcataaggaaatccttatccaccctgcataaattcagaa 37867202  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 394
Target Start/End: Complemental strand, 42364742 - 42364689
Alignment:
Q  341 gggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||| ||||  |||||| |||||||||||| |||||    
T  42364742 gggcgcggttatggtgcaaaaggaaatccttatgcaccctgcataaatccagaa 42364689  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 44915290 - 44915339
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| |||| |||||||  |||||||||||| ||||    
T  44915290 gcggttatggtgcataaggaaatctttatgcagcctgcataaatttagaa 44915339  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 20661639 - 20661591
Alignment:
Q  346 cggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  20661639 cggttatggtgcataaggaaatcattatgcaccctgcataaatccagaa 20661591  T

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Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 20165 - 20116
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  20165 gcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaa 20116  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 80912 - 80863
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||||||||  |||||| ||||||| ||||||||||    
T  80912 gcggttatggtgcataagaaaatccttatgcaccctgcaaaaattcagaa 80863  T

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Target: scaffold0664 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 3204 - 3150
Alignment:
Q  340 ggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    ||||||| ||||| ||||||||| |||| ||||||| |||||||||||| |||||    
T  3204 ggggcgctgttatcgtgcataaggaaatctttatgcaccctgcataaatccagaa 3150  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 33608 - 33658
Alignment:
Q  338 gaggggcgcggttatggtgcataagaaaatttttatgcgccctgcataaat 388  Q
    |||||| |||||||||||||||||| ||||  |||||| ||||||||||||    
T  33608 gaggggtgcggttatggtgcataaggaaatccttatgcaccctgcataaat 33658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 1293 - 1244
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  1293 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 1244  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 23543 - 23592
Alignment:
Q  345 gcggttatggtgcataagaaaatttttatgcgccctgcataaattcagaa 394  Q
    |||||||||||||||||| ||||  |||||| |||||||||||| |||||    
T  23543 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaa 23592  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 96001 - 96041
Alignment:
Q  348 gttatggtgcataagaaaatttttatgcgccctgcataaat 388  Q
    ||||||||||||||||||||  |||||| ||||||||||||    
T  96001 gttatggtgcataagaaaatccttatgcaccctgcataaat 96041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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