View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8325_low_20 (Length: 218)

Name: NF8325_low_20
Description: NF8325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8325_low_20
NF8325_low_20
[»] chr5 (12 HSPs)
chr5 (33-200)||(40548363-40548526)
chr5 (27-109)||(40544224-40544306)
chr5 (15-101)||(31788602-31788688)
chr5 (28-96)||(37511995-37512063)
chr5 (30-101)||(32031957-32032028)
chr5 (26-109)||(32642007-32642090)
chr5 (26-109)||(42782259-42782342)
chr5 (36-97)||(39725456-39725517)
chr5 (36-109)||(42405814-42405887)
chr5 (36-102)||(21698716-21698782)
chr5 (26-101)||(27174382-27174457)
chr5 (35-101)||(42841497-42841563)
[»] chr6 (7 HSPs)
chr6 (24-111)||(29144357-29144444)
chr6 (21-100)||(32745771-32745850)
chr6 (13-109)||(21379346-21379442)
chr6 (36-96)||(29123229-29123289)
chr6 (35-100)||(29149780-29149845)
chr6 (36-97)||(29152995-29153056)
chr6 (36-97)||(34279430-34279491)
[»] chr4 (7 HSPs)
chr4 (36-98)||(9603473-9603535)
chr4 (36-100)||(54295970-54296034)
chr4 (43-97)||(37894946-37895000)
chr4 (36-109)||(9568307-9568380)
chr4 (36-97)||(9594671-9594732)
chr4 (37-101)||(20425719-20425783)
chr4 (43-97)||(9573461-9573515)
[»] chr1 (1 HSPs)
chr1 (33-109)||(51875573-51875649)
[»] scaffold0068 (1 HSPs)
scaffold0068 (36-102)||(15128-15194)
[»] chr7 (1 HSPs)
chr7 (27-97)||(42445400-42445470)
[»] chr2 (3 HSPs)
chr2 (43-96)||(7524999-7525052)
chr2 (51-96)||(7436173-7436218)
chr2 (37-109)||(44919392-44919464)
[»] scaffold0134 (1 HSPs)
scaffold0134 (6-100)||(17166-17260)
[»] scaffold0129 (1 HSPs)
scaffold0129 (28-85)||(18046-18103)


Alignment Details
Target: chr5 (Bit Score: 131; Significance: 4e-68; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 33 - 200
Target Start/End: Original strand, 40548363 - 40548526
Alignment:
Q  33 cacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatctttgaatgtgtcacctatctgaa 132  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | |    | |||||||||||||    
T  40548363 cacgatgatattgccttttccattctataaaaacttcctgttaaatctttgaagcgatttgaatgcataagtaaatcatgg----tctcacctatctgaa 40548458  T
Q  133 gactctcagttcatgaccatgtatggcaacaatttcttgtccaacactccttcttacgacggtgatac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40548459 gactctcagttcatgaccatgtatggcaacaatttcttgtccaacactccttcttacgacggtgatac 40548526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 40544224 - 40544306
Alignment:
Q  27 tatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatc 109  Q
    ||||||||||||||| ||||||| || |||||||||||||| ||| ||||||||||||| ||||||||||||||||| |||||    
T  40544224 tatattcacgatgatgttgccttctctattctatcaaaactccctattaaatctttgaaacgatttgaatgcgtaagaaaatc 40544306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 31788602 - 31788688
Alignment:
Q  15 aaggtaaccaactatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgta 101  Q
    |||||||| | || ||||||||||||||||||||| || |||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  31788602 aaggtaactagctttattcacgatgatattgccttctctattctatcaaaactccccattaaatctttgaaacgatttgaatgcgta 31788688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 37511995 - 37512063
Alignment:
Q  28 atattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaat 96  Q
    ||||||||||||| |||||||| |||||| |||||||||| ||| | ||||||||||| ||||||||||    
T  37511995 atattcacgatgacattgccttctccattttatcaaaactgcctctcaaatctttgaaacgatttgaat 37512063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 32031957 - 32032028
Alignment:
Q  30 attcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgta 101  Q
    |||||||| ||||||||||| || ||||||| |||||| ||  ||||||||||||| |||||||||||||||    
T  32031957 attcacgaagatattgccttctctattctattaaaactccccattaaatctttgaaacgatttgaatgcgta 32032028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 32642007 - 32642090
Alignment:
Q  26 ctatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatc 109  Q
    |||||| |||||||||||| ||||||| |||||||||||| | ||| ||||||||||| ||| ||||||||  ||| |||||||    
T  32642007 ctatatacacgatgatattaccttttcaattctatcaaaattacctcttaaatctttgtagcaatttgaatatgtacgtaaatc 32642090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 42782259 - 42782342
Alignment:
Q  26 ctatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatc 109  Q
    |||||| || ||||||||| |||| || |||||||||||| | ||  ||||||||||||||||||||| ||||||| |||||||    
T  42782259 ctatatacatgatgatattaccttctcaattctatcaaaattaccgattaaatctttgaagcgatttggatgcgtacgtaaatc 42782342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 39725517 - 39725456
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatg 97  Q
    |||||||||| ||| || ||||| |||||||||||| | |||||||||||||||||||||||    
T  39725517 gatgatattgtcttctctattctgtcaaaacttcctttcaaatctttgaagcgatttgaatg 39725456  T

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Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 42405814 - 42405887
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatc 109  Q
    |||||||||||||| || ||| | || ||||| |||||||||||||| |||||||||||| ||||| |||||||    
T  42405814 gatgatattgccttatctattatgtcgaaactgcctgttaaatctttaaagcgatttgaaagcgtacgtaaatc 42405887  T

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Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 21698716 - 21698782
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaa 102  Q
    |||||||||||| |||  ||||| || |||||| || ||||||||||||||||||||||||| ||||    
T  21698716 gatgatattgccgtttttattctttccaaactttcttttaaatctttgaagcgatttgaatgtgtaa 21698782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 27174457 - 27174382
Alignment:
Q  26 ctatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgta 101  Q
    |||||| || ||||||||| |||| || | |||||||||| | ||| | ||||||||||||||||||| |||||||    
T  27174457 ctatatacatgatgatattaccttctcaaatctatcaaaattacctctgaaatctttgaagcgatttggatgcgta 27174382  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 42841563 - 42841497
Alignment:
Q  35 cgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgta 101  Q
    ||||||||||| ||| |  ||||| |||||||| ||| || |||||||||||| |||||||||||||    
T  42841563 cgatgatattgtcttctatattctctcaaaactccctattgaatctttgaagccatttgaatgcgta 42841497  T

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Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 29144357 - 29144444
Alignment:
Q  24 aactatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatctt 111  Q
    |||||||| | ||||||||||||||| ||||||||||| ||| | ||| ||||||||||||||||||||| ||||||  |||||||||    
T  29144357 aactatatactcgatgatattgccttatccattctatcgaaattgcctcttaaatctttgaagcgatttggatgcgttcgtaaatctt 29144444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 32745850 - 32745771
Alignment:
Q  21 accaactatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgt 100  Q
    ||||||||||| |  |||||||||||||| ||||| ||||||||||| ||| |||||||||| || ||||||||||||||    
T  32745850 accaactatatacctgatgatattgccttctccatcctatcaaaactacctcttaaatcttttaaacgatttgaatgcgt 32745771  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 21379442 - 21379346
Alignment:
Q  13 aaaaggtaaccaactatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatc 109  Q
    ||||||||| ||||||| | || |||||||| | ||| || |||||||| ||  | ||| ||||||||||||||||||||| ||||||  |||||||    
T  21379442 aaaaggtaaacaactatttacatgatgatatagtcttctctattctatcgaagttacctcttaaatctttgaagcgatttggatgcgtccgtaaatc 21379346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 29123229 - 29123289
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaat 96  Q
    |||||||||||||| ||||||||||||||| | ||| |||||||||| || ||| ||||||    
T  29123229 gatgatattgccttctccattctatcaaaattgcctcttaaatcttttaaacgagttgaat 29123289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 29149845 - 29149780
Alignment:
Q  35 cgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgt 100  Q
    ||||||||| ||||| |||||||| |||||| | ||| |||||||||| ||  |||||||||||||    
T  29149845 cgatgatatagccttctccattctctcaaaattgcctcttaaatcttttaactgatttgaatgcgt 29149780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 29153056 - 29152995
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatg 97  Q
    |||||||||||||| |||||||| |||||| | ||| |||||||||| ||||  ||||||||    
T  29153056 gatgatattgccttctccattctctcaaaattgcctcttaaatctttcaagcattttgaatg 29152995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 34279491 - 34279430
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatg 97  Q
    |||||||||||||| |||||||| |||||| | ||| |||||||||| ||| | ||||||||    
T  34279491 gatgatattgccttctccattctttcaaaattacctcttaaatctttcaagagttttgaatg 34279430  T

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Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 9603535 - 9603473
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgc 98  Q
    |||||||||||||| ||||||||||| ||| | ||| |||||||||| |||||||||||||||    
T  9603535 gatgatattgccttctccattctatccaaattgcctcttaaatcttttaagcgatttgaatgc 9603473  T

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Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 54296034 - 54295970
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgt 100  Q
    ||||||||| |||| |||||| |||||||||| ||| |||||||||| || ||||||||||||||    
T  54296034 gatgatatttccttctccattttatcaaaactgcctcttaaatcttttaaacgatttgaatgcgt 54295970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 37894946 - 37895000
Alignment:
Q  43 ttgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatg 97  Q
    ||||||| ||||||||||| ||||| ||| | |||||||||||||||||||||||    
T  37894946 ttgccttctccattctatccaaactccctctcaaatctttgaagcgatttgaatg 37895000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 9568307 - 9568380
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatc 109  Q
    |||||||||||||| || |||||||| ||| | ||| |||||||| | |||||||||||||||||  |||||||    
T  9568307 gatgatattgccttctctattctatccaaattgccttttaaatctattaagcgatttgaatgcgttcgtaaatc 9568380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 9594732 - 9594671
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatg 97  Q
    ||||||||| |||| ||||||||||| ||| | ||| |||||||||| ||||||||||||||    
T  9594732 gatgatatttccttctccattctatctaaattacctattaaatcttttaagcgatttgaatg 9594671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 20425719 - 20425783
Alignment:
Q  37 atgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgta 101  Q
    |||||||| | || || ||||| |||||||||||| | ||||||||||| |||||||||||||||    
T  20425719 atgatatttcattctctattctgtcaaaacttcctttaaaatctttgaaacgatttgaatgcgta 20425783  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 9573461 - 9573515
Alignment:
Q  43 ttgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatg 97  Q
    ||||||| ||||||||||| ||| | ||| |||||||||| ||||||||||||||    
T  9573461 ttgccttctccattctatccaaattgcctattaaatcttttaagcgatttgaatg 9573515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 51875649 - 51875573
Alignment:
Q  33 cacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatc 109  Q
    ||||||||||||| ||| || |||||||||||||| ||| || ||||||| |||||||||| ||| ||| |||||||    
T  51875649 cacgatgatattgtcttctcgattctatcaaaactacctcttcaatctttaaagcgatttggatgtgtatgtaaatc 51875573  T

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Target: scaffold0068 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 15194 - 15128
Alignment:
Q  36 gatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaa 102  Q
    |||||||||||| |||  ||||| || |||||| || ||||||||||||||||||||||||| ||||    
T  15194 gatgatattgccgtttttattctttccaaactttcttttaaatctttgaagcgatttgaatgtgtaa 15128  T

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Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 42445400 - 42445470
Alignment:
Q  27 tatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatg 97  Q
    |||||||||||||||||  | || |||||| |||||||| | ||| |||||||||| ||||||||||||||    
T  42445400 tatattcacgatgatataacattctccattatatcaaaattacctcttaaatcttttaagcgatttgaatg 42445470  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 7525052 - 7524999
Alignment:
Q  43 ttgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaat 96  Q
    |||| |||||||||||||||||| | ||| ||||||||||| ||||||||||||    
T  7525052 ttgcattttccattctatcaaaattgcctcttaaatctttgcagcgatttgaat 7524999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 7436218 - 7436173
Alignment:
Q  51 tccattctatcaaaacttcctgttaaatctttgaagcgatttgaat 96  Q
    ||||||||||||||  | ||| ||||||||||||||||||||||||    
T  7436218 tccattctatcaaatttgcctcttaaatctttgaagcgatttgaat 7436173  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 44919464 - 44919392
Alignment:
Q  37 atgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgtaagtaaatc 109  Q
    ||||| |||| || || ||||| |||||||||||| | |||||||| |||| ||||||||| ||| |||||||    
T  44919464 atgatcttgcattctctattctgtcaaaacttcctttaaaatcttttaagccatttgaatgtgtacgtaaatc 44919392  T

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Target: scaffold0134 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 17260 - 17166
Alignment:
Q  6 acaaataaaaaggtaaccaactatattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaagcgatttgaatgcgt 100  Q
    |||||||||||||| |  |||| ||| |  || ||||||  ||| ||||||||||||||  | ||| |||||||||||||| |||||||||||||    
T  17260 acaaataaaaaggtgagaaactttatacctgacgatattagcttatccattctatcaaagttgcctcttaaatctttgaagagatttgaatgcgt 17166  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 18103 - 18046
Alignment:
Q  28 atattcacgatgatattgccttttccattctatcaaaacttcctgttaaatctttgaa 85  Q
    ||||||| |||||| |||| ||||||||||| || ||||| ||| |||||||||||||    
T  18103 atattcatgatgatcttgcattttccattctgtccaaactgcctcttaaatctttgaa 18046  T

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