View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8328_high_3 (Length: 262)
Name: NF8328_high_3
Description: NF8328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8328_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 36172033 - 36171793
Alignment:
| Q |
7 |
gacatcatcacactcacacaatcaagaaaattgatttcccatatttaggaacttgtacttccacaattcacgccgcaaattattttaagcaaagtacttn |
106 |
Q |
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| T |
36172033 |
gacatcatcacactcacacaatcaagaaaattgatttcccatatttaggaacttgtacttccacaattcacgccgcaaattattttaagcaaagtactta |
36171934 |
T |
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| Q |
107 |
nnnnnnccagagaaaacaaacataagggtaatgtaaattatataatgatgtatgattaatgatcattctatgctcttatcttaaaaagttcacgagcaac |
206 |
Q |
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| T |
36171933 |
aaaaaaccagagaaaacaaacataagggtaatgtaaattatataatgatgtatgattaatgatcattctatgctcttatcttaaaaagttcacgagcaac |
36171834 |
T |
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| Q |
207 |
aagcatgtggacaaacgtcatgtttacaatcttgatgaatg |
247 |
Q |
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| T |
36171833 |
aagcatgtggacaaacgtcatgtttacaatcttgatgaatg |
36171793 |
T |
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