View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8329_high_7 (Length: 246)
Name: NF8329_high_7
Description: NF8329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8329_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 35317870 - 35317779
Alignment:
| Q |
139 |
tcccttcccagttcccaaaaaccagtaactgtggaaattcccaagacccaaaaaacatacgactggtcacacaaatcacaaagtcacagaag |
230 |
Q |
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| T |
35317870 |
tcccttcccagttcccaaaaaccagtaactgtggaaattcccaagacccaaaaaacatacgactggtcacacaaatcacaaagtcacagaag |
35317779 |
T |
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Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 35317993 - 35317917
Alignment:
| Q |
21 |
tctcattctcatttcttacctatttcattaaaaaattaatacaaaaattcttagaccaaaatctcattctcattcct |
97 |
Q |
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| T |
35317993 |
tctcattctcatttcttacctatttcattaaaaaattaatacaaaaattcttagaccaaaatctcattctcattcct |
35317917 |
T |
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