View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8333_low_8 (Length: 361)

Name: NF8333_low_8
Description: NF8333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8333_low_8
NF8333_low_8
[»] chr8 (67 HSPs)
chr8 (133-361)||(42560182-42560410)
chr8 (164-361)||(21579861-21580058)
chr8 (164-361)||(29763523-29763719)
chr8 (144-361)||(18760515-18760732)
chr8 (193-295)||(32807294-32807396)
chr8 (164-359)||(41680792-41680974)
chr8 (144-304)||(27472391-27472550)
chr8 (19-138)||(42560492-42560611)
chr8 (144-305)||(1327119-1327279)
chr8 (144-304)||(38550086-38550245)
chr8 (1-138)||(21328832-21328970)
chr8 (19-138)||(16197698-16197818)
chr8 (172-265)||(39936813-39936906)
chr8 (144-276)||(20982747-20982879)
chr8 (144-234)||(6102532-6102622)
chr8 (1-137)||(22005469-22005607)
chr8 (1-138)||(21980471-21980610)
chr8 (1-138)||(21985454-21985593)
chr8 (1-138)||(22000490-22000628)
chr8 (236-361)||(3273212-3273336)
chr8 (1-78)||(11774631-11774708)
chr8 (1-138)||(8414649-8414787)
chr8 (135-314)||(39833842-39834023)
chr8 (164-268)||(21415211-21415314)
chr8 (1-138)||(44493864-44494002)
chr8 (172-222)||(19128110-19128160)
chr8 (1-78)||(44493991-44494068)
chr8 (19-138)||(11251829-11251949)
chr8 (19-78)||(21328783-21328843)
chr8 (1-77)||(44493959-44494035)
chr8 (19-78)||(21328817-21328876)
chr8 (19-78)||(21967793-21967852)
chr8 (19-78)||(21980633-21980692)
chr8 (19-78)||(21985616-21985675)
chr8 (19-78)||(22008997-22009056)
chr8 (20-138)||(34950370-34950489)
chr8 (19-77)||(21980567-21980625)
chr8 (1-78)||(21980599-21980677)
chr8 (1-78)||(21985582-21985660)
chr8 (19-77)||(22000585-22000643)
chr8 (1-79)||(34950286-34950364)
chr8 (1-77)||(11774664-11774740)
chr8 (19-138)||(11774715-11774835)
chr8 (25-77)||(22005564-22005616)
chr8 (19-78)||(8414743-8414802)
chr8 (19-77)||(21328749-21328808)
chr8 (19-77)||(8414777-8414835)
chr8 (19-77)||(11774583-11774641)
chr8 (19-77)||(11774616-11774674)
chr8 (19-77)||(21985550-21985608)
chr8 (19-77)||(44494025-44494083)
chr8 (20-78)||(21980700-21980760)
chr8 (20-78)||(21985683-21985743)
chr8 (20-78)||(22000651-22000711)
chr8 (25-133)||(22352677-22352785)
chr8 (18-79)||(42560617-42560677)
chr8 (19-78)||(16197665-16197724)
chr8 (217-265)||(19139966-19140014)
chr8 (19-78)||(21967826-21967886)
chr8 (19-78)||(21980666-21980726)
chr8 (19-78)||(21985649-21985709)
chr8 (19-78)||(22000617-22000677)
chr8 (19-78)||(22009030-22009090)
chr8 (329-361)||(23450822-23450854)
chr8 (329-361)||(24495934-24495966)
chr8 (329-361)||(34301900-34301932)
chr8 (25-77)||(34950277-34950329)
[»] chr7 (58 HSPs)
chr7 (133-361)||(15213668-15213896)
chr7 (178-361)||(11085013-11085196)
chr7 (194-361)||(11092767-11092934)
chr7 (164-358)||(30820914-30821108)
chr7 (164-358)||(36685908-36686102)
chr7 (193-322)||(9320423-9320552)
chr7 (164-303)||(38480237-38480376)
chr7 (144-357)||(37727585-37727799)
chr7 (144-305)||(8468294-8468454)
chr7 (144-305)||(14270138-14270298)
chr7 (144-304)||(45847735-45847894)
chr7 (137-266)||(9389829-9389958)
chr7 (1-138)||(13892399-13892536)
chr7 (144-305)||(17232488-17232648)
chr7 (209-355)||(15439330-15439477)
chr7 (20-138)||(15213468-15213586)
chr7 (25-138)||(29003819-29003932)
chr7 (172-265)||(12371434-12371527)
chr7 (19-138)||(34957163-34957282)
chr7 (172-274)||(8851959-8852061)
chr7 (172-265)||(13148275-13148368)
chr7 (185-323)||(11391870-11392009)
chr7 (172-265)||(11066624-11066717)
chr7 (1-78)||(41283913-41283990)
chr7 (172-265)||(12127967-12128060)
chr7 (144-272)||(18302035-18302163)
chr7 (172-262)||(32434396-32434485)
chr7 (1-73)||(11394449-11394521)
chr7 (172-227)||(59232-59287)
chr7 (50-134)||(833543-833627)
chr7 (50-134)||(837539-837623)
chr7 (50-134)||(1198723-1198807)
chr7 (50-134)||(1202719-1202803)
chr7 (1-77)||(16185758-16185834)
chr7 (19-78)||(16251709-16251768)
chr7 (19-77)||(11394680-11394738)
chr7 (19-77)||(16185743-16185801)
chr7 (1-79)||(16251675-16251753)
chr7 (1-78)||(16251742-16251819)
chr7 (1-78)||(41283946-41284023)
chr7 (20-77)||(41283998-41284055)
chr7 (19-79)||(16251774-16251834)
chr7 (1-128)||(41284012-41284140)
chr7 (1-76)||(11394615-11394690)
chr7 (19-78)||(16251610-16251669)
chr7 (1-75)||(11394649-11394723)
chr7 (25-134)||(14416439-14416548)
chr7 (1-78)||(16251643-16251720)
chr7 (19-77)||(41283865-41283923)
chr7 (19-77)||(41283898-41283956)
chr7 (213-242)||(39267712-39267741)
chr7 (20-80)||(9320738-9320797)
chr7 (20-76)||(12556688-12556743)
chr7 (20-80)||(15116237-15116297)
chr7 (19-79)||(15213296-15213359)
chr7 (19-71)||(16251519-16251571)
chr7 (1-77)||(16251578-16251654)
chr7 (27-78)||(16251808-16251860)
[»] chr5 (32 HSPs)
chr5 (133-361)||(36460139-36460367)
chr5 (164-361)||(12122176-12122373)
chr5 (172-358)||(21557703-21557889)
chr5 (164-354)||(21555041-21555231)
chr5 (193-361)||(30615785-30615952)
chr5 (164-352)||(31455690-31455881)
chr5 (193-322)||(24212397-24212526)
chr5 (193-322)||(35852652-35852781)
chr5 (133-277)||(21741653-21741798)
chr5 (164-338)||(31455077-31455254)
chr5 (20-138)||(36459940-36460057)
chr5 (144-305)||(5889269-5889429)
chr5 (144-305)||(29915167-29915327)
chr5 (193-355)||(5889072-5889235)
chr5 (193-276)||(17875243-17875326)
chr5 (19-138)||(43243448-43243567)
chr5 (188-272)||(21871687-21871771)
chr5 (188-272)||(21875967-21876051)
chr5 (20-134)||(23538252-23538366)
chr5 (50-134)||(10816256-10816340)
chr5 (19-138)||(33473503-33473623)
chr5 (53-129)||(19076272-19076349)
chr5 (1-77)||(43243542-43243617)
chr5 (20-77)||(31252979-31253036)
chr5 (20-79)||(43243572-43243631)
chr5 (19-78)||(43243606-43243665)
chr5 (19-77)||(33473598-33473656)
chr5 (213-242)||(21871593-21871622)
chr5 (213-242)||(21875873-21875902)
chr5 (213-242)||(22120217-22120246)
chr5 (1-77)||(31252947-31253022)
chr5 (19-78)||(31253044-31253104)
[»] chr3 (62 HSPs)
chr3 (133-361)||(11912890-11913118)
chr3 (164-358)||(31224612-31224806)
chr3 (164-358)||(15447658-15447849)
chr3 (144-305)||(49969963-49970124)
chr3 (164-303)||(31415404-31415543)
chr3 (193-318)||(6808166-6808291)
chr3 (198-357)||(1988890-1989050)
chr3 (133-277)||(1465531-1465676)
chr3 (144-305)||(20630191-20630351)
chr3 (172-278)||(30175304-30175410)
chr3 (172-274)||(40811994-40812096)
chr3 (144-295)||(49389772-49389924)
chr3 (20-137)||(13436104-13436222)
chr3 (25-138)||(16839848-16839961)
chr3 (172-265)||(40807152-40807245)
chr3 (178-295)||(5841943-5842061)
chr3 (144-305)||(18439941-18440101)
chr3 (172-265)||(22307386-22307479)
chr3 (150-274)||(12269443-12269567)
chr3 (172-265)||(17538263-17538356)
chr3 (1-77)||(41469-41545)
chr3 (19-138)||(14647893-14648012)
chr3 (20-134)||(8928612-8928727)
chr3 (1-138)||(41502-41640)
chr3 (1-138)||(2248891-2249029)
chr3 (1-78)||(16325607-16325685)
chr3 (144-272)||(12852484-12852613)
chr3 (1-73)||(5841602-5841674)
chr3 (144-268)||(45797046-45797169)
chr3 (214-355)||(12269653-12269793)
chr3 (144-252)||(14501001-14501109)
chr3 (20-78)||(16840005-16840064)
chr3 (25-134)||(13520718-13520828)
chr3 (89-138)||(11912759-11912808)
chr3 (1-77)||(16325641-16325718)
chr3 (1-77)||(14647987-14648062)
chr3 (19-138)||(16325480-16325600)
chr3 (1-77)||(16325575-16325651)
chr3 (2-101)||(45220476-45220576)
chr3 (19-78)||(16839972-16840031)
chr3 (19-77)||(2248986-2249044)
chr3 (19-77)||(5841385-5841443)
chr3 (20-78)||(14648084-14648142)
chr3 (1-78)||(14648051-14648128)
chr3 (1-77)||(41436-41512)
chr3 (19-78)||(2249018-2249076)
chr3 (1-76)||(5841433-5841508)
chr3 (20-79)||(14648017-14648076)
chr3 (19-78)||(14648117-14648176)
chr3 (19-78)||(16325674-16325733)
chr3 (1-75)||(5841400-5841474)
chr3 (19-77)||(16325708-16325766)
chr3 (19-76)||(16325809-16325867)
chr3 (164-254)||(18439845-18439935)
chr3 (20-78)||(45220533-45220591)
chr3 (20-78)||(45220730-45220788)
chr3 (19-77)||(45220764-45220822)
chr3 (19-79)||(2249049-2249110)
chr3 (213-242)||(12852390-12852419)
chr3 (53-129)||(17691999-17692076)
chr3 (53-101)||(52466525-52466574)
chr3 (329-361)||(12158633-12158665)
[»] scaffold0599 (4 HSPs)
scaffold0599 (133-361)||(166-394)
scaffold0599 (133-340)||(4584-4791)
scaffold0599 (89-138)||(35-84)
scaffold0599 (89-138)||(4453-4502)
[»] chr6 (34 HSPs)
chr6 (134-361)||(34296924-34297151)
chr6 (164-359)||(20734104-20734299)
chr6 (209-359)||(27851246-27851397)
chr6 (193-322)||(2201148-2201277)
chr6 (193-320)||(22420996-22421123)
chr6 (144-301)||(19399738-19399895)
chr6 (164-353)||(25956519-25956709)
chr6 (19-138)||(34297234-34297353)
chr6 (172-295)||(18927832-18927954)
chr6 (144-305)||(25956715-25956875)
chr6 (144-305)||(27851035-27851195)
chr6 (144-304)||(31630622-31630781)
chr6 (172-265)||(18708656-18708749)
chr6 (172-265)||(23151069-23151162)
chr6 (183-265)||(27322221-27322303)
chr6 (178-295)||(28708636-28708754)
chr6 (1-78)||(23955738-23955815)
chr6 (25-134)||(25738208-25738318)
chr6 (1-138)||(7429648-7429785)
chr6 (20-138)||(14594415-14594533)
chr6 (25-134)||(29417087-29417196)
chr6 (1-73)||(28708295-28708367)
chr6 (20-138)||(9622588-9622706)
chr6 (1-138)||(23955837-23955975)
chr6 (1-77)||(23955771-23955847)
chr6 (20-78)||(7429634-7429692)
chr6 (19-77)||(23955822-23955880)
chr6 (19-77)||(28708078-28708136)
chr6 (19-78)||(7429600-7429659)
chr6 (1-76)||(28708126-28708201)
chr6 (20-78)||(9622681-9622739)
chr6 (19-77)||(14594509-14594567)
chr6 (19-77)||(23955723-23955781)
chr6 (1-75)||(28708093-28708167)
[»] scaffold0737 (1 HSPs)
scaffold0737 (172-361)||(6333-6522)
[»] chr4 (36 HSPs)
chr4 (195-361)||(33186133-33186299)
chr4 (193-322)||(15880726-15880855)
chr4 (164-361)||(35812145-35812341)
chr4 (133-277)||(15099204-15099349)
chr4 (144-304)||(362113-362272)
chr4 (172-295)||(9923305-9923427)
chr4 (150-305)||(46642707-46642861)
chr4 (172-295)||(11479432-11479554)
chr4 (164-349)||(13844572-13844758)
chr4 (144-305)||(15868794-15868953)
chr4 (186-305)||(52873251-52873369)
chr4 (144-305)||(13844406-13844566)
chr4 (144-272)||(630890-631018)
chr4 (172-265)||(19609480-19609573)
chr4 (164-355)||(46642867-46643058)
chr4 (143-361)||(21189678-21189896)
chr4 (1-78)||(28385119-28385196)
chr4 (144-268)||(32851253-32851377)
chr4 (20-134)||(4831718-4831832)
chr4 (20-134)||(4835013-4835127)
chr4 (256-350)||(14185252-14185346)
chr4 (1-138)||(28385218-28385356)
chr4 (19-77)||(28385203-28385261)
chr4 (50-132)||(30146255-30146337)
chr4 (1-78)||(28385152-28385229)
chr4 (213-242)||(630796-630825)
chr4 (213-242)||(13812831-13812860)
chr4 (193-254)||(15190367-15190428)
chr4 (213-242)||(15868731-15868760)
chr4 (53-129)||(37838876-37838953)
chr4 (19-80)||(37838991-37839051)
chr4 (19-79)||(37839024-37839085)
chr4 (53-129)||(42597605-42597682)
chr4 (19-80)||(42597720-42597780)
chr4 (19-79)||(42597753-42597814)
chr4 (25-77)||(28385110-28385162)
[»] scaffold0071 (1 HSPs)
scaffold0071 (164-358)||(14340-14534)
[»] chr1 (39 HSPs)
chr1 (198-361)||(12328510-12328673)
chr1 (193-314)||(51274290-51274411)
chr1 (214-322)||(8885447-8885555)
chr1 (133-277)||(35981808-35981953)
chr1 (133-266)||(20636704-20636837)
chr1 (144-305)||(43542977-43543137)
chr1 (213-361)||(51326892-51327027)
chr1 (144-305)||(28194543-28194703)
chr1 (164-355)||(28194345-28194537)
chr1 (173-274)||(48301020-48301121)
chr1 (144-305)||(43697240-43697400)
chr1 (193-353)||(43697435-43697596)
chr1 (144-304)||(46382652-46382809)
chr1 (1-78)||(636340-636417)
chr1 (19-138)||(20031831-20031950)
chr1 (172-265)||(41227507-41227600)
chr1 (50-134)||(29534402-29534486)
chr1 (53-138)||(11945378-11945464)
chr1 (1-78)||(20031924-20032000)
chr1 (20-78)||(11945247-11945305)
chr1 (20-78)||(43630761-43630819)
chr1 (1-74)||(11809687-11809759)
chr1 (1-78)||(20031989-20032066)
chr1 (209-254)||(49261407-49261452)
chr1 (19-79)||(11809714-11809774)
chr1 (20-79)||(20031955-20032014)
chr1 (19-74)||(20032026-20032081)
chr1 (1-75)||(636310-636384)
chr1 (19-77)||(636374-636432)
chr1 (19-77)||(636407-636465)
chr1 (172-254)||(20636879-20636961)
chr1 (20-101)||(43630443-43630525)
chr1 (25-129)||(25263124-25263228)
chr1 (25-78)||(43630563-43630616)
chr1 (19-78)||(11809748-11809808)
chr1 (19-78)||(11945179-11945239)
chr1 (1-77)||(11945261-11945337)
chr1 (19-78)||(20032055-20032115)
chr1 (1-77)||(43630729-43630805)
[»] chr2 (21 HSPs)
chr2 (219-361)||(2524384-2524526)
chr2 (144-361)||(6576354-6576571)
chr2 (172-334)||(24865452-24865614)
chr2 (193-323)||(22501018-22501148)
chr2 (193-323)||(22508952-22509082)
chr2 (194-334)||(7672240-7672374)
chr2 (173-276)||(24883610-24883713)
chr2 (172-295)||(24436200-24436321)
chr2 (172-265)||(5032127-5032220)
chr2 (173-265)||(24781643-24781735)
chr2 (209-276)||(22501128-22501195)
chr2 (209-276)||(22509062-22509129)
chr2 (19-132)||(22702921-22703034)
chr2 (144-210)||(21367986-21368053)
chr2 (25-93)||(23707605-23707674)
chr2 (25-93)||(24681152-24681220)
chr2 (20-73)||(24917808-24917860)
chr2 (19-79)||(37379221-37379282)
chr2 (19-80)||(37379255-37379315)
chr2 (53-129)||(37379353-37379430)
chr2 (20-80)||(18359196-18359256)
[»] scaffold0080 (3 HSPs)
scaffold0080 (172-361)||(59261-59449)
scaffold0080 (20-138)||(28724-28842)
scaffold0080 (20-138)||(34189-34307)
[»] scaffold1351 (1 HSPs)
scaffold1351 (164-334)||(1566-1736)
[»] scaffold0371 (1 HSPs)
scaffold0371 (173-361)||(3073-3260)
[»] scaffold0395 (1 HSPs)
scaffold0395 (172-322)||(10903-11053)
[»] scaffold0815 (4 HSPs)
scaffold0815 (1-279)||(310-599)
scaffold0815 (20-77)||(263-320)
scaffold0815 (20-77)||(296-353)
scaffold0815 (19-78)||(195-255)
[»] scaffold0434 (2 HSPs)
scaffold0434 (174-306)||(6769-6901)
scaffold0434 (20-129)||(7222-7331)
[»] scaffold1137 (1 HSPs)
scaffold1137 (133-266)||(2424-2557)
[»] scaffold0009 (1 HSPs)
scaffold0009 (150-305)||(85121-85275)
[»] scaffold0116 (3 HSPs)
scaffold0116 (164-353)||(43682-43872)
scaffold0116 (164-353)||(47602-47792)
scaffold0116 (144-305)||(43878-44038)
[»] scaffold0061 (2 HSPs)
scaffold0061 (150-324)||(15419-15592)
scaffold0061 (150-324)||(24477-24650)
[»] scaffold0810 (2 HSPs)
scaffold0810 (144-277)||(2912-3045)
scaffold0810 (266-355)||(3066-3156)
[»] scaffold0004 (1 HSPs)
scaffold0004 (144-305)||(362872-363032)
[»] scaffold0134 (1 HSPs)
scaffold0134 (172-265)||(10029-10122)
[»] scaffold0100 (1 HSPs)
scaffold0100 (188-305)||(36142-36258)
[»] scaffold0802 (1 HSPs)
scaffold0802 (172-295)||(5478-5600)
[»] scaffold0375 (1 HSPs)
scaffold0375 (173-264)||(9106-9197)
[»] scaffold0335 (1 HSPs)
scaffold0335 (172-295)||(813-935)
[»] scaffold0513 (1 HSPs)
scaffold0513 (175-305)||(10963-11092)
[»] scaffold0384 (1 HSPs)
scaffold0384 (172-265)||(8189-8282)
[»] scaffold0001 (15 HSPs)
scaffold0001 (1-138)||(163277-163413)
scaffold0001 (172-295)||(76898-77019)
scaffold0001 (1-78)||(175668-175745)
scaffold0001 (50-137)||(153153-153240)
scaffold0001 (1-138)||(168413-168551)
scaffold0001 (1-138)||(175767-175905)
scaffold0001 (19-79)||(153314-153374)
scaffold0001 (2-78)||(163369-163445)
scaffold0001 (1-77)||(175701-175777)
scaffold0001 (25-79)||(153480-153534)
scaffold0001 (19-77)||(175752-175810)
scaffold0001 (19-79)||(153546-153606)
scaffold0001 (1-78)||(153282-153359)
scaffold0001 (19-77)||(175653-175711)
scaffold0001 (19-75)||(153384-153440)
[»] scaffold0679 (5 HSPs)
scaffold0679 (178-295)||(2449-2567)
scaffold0679 (1-73)||(2836-2908)
scaffold0679 (19-77)||(3067-3125)
scaffold0679 (1-76)||(3002-3077)
scaffold0679 (1-75)||(3036-3110)
[»] scaffold0075 (1 HSPs)
scaffold0075 (144-305)||(8379-8538)
[»] scaffold0124 (2 HSPs)
scaffold0124 (144-272)||(24770-24898)
scaffold0124 (213-242)||(24676-24705)
[»] scaffold0016 (5 HSPs)
scaffold0016 (1-138)||(172802-172941)
scaffold0016 (19-77)||(172898-172956)
scaffold0016 (1-78)||(172930-173008)
scaffold0016 (1-78)||(172964-173041)
scaffold0016 (19-78)||(172997-173056)
[»] scaffold0586 (1 HSPs)
scaffold0586 (164-268)||(1887-1990)
[»] scaffold0509 (1 HSPs)
scaffold0509 (181-265)||(9561-9645)
[»] scaffold0301 (1 HSPs)
scaffold0301 (19-138)||(14332-14452)
[»] scaffold0066 (1 HSPs)
scaffold0066 (19-134)||(48150-48265)
[»] scaffold0021 (1 HSPs)
scaffold0021 (20-134)||(146009-146123)
[»] scaffold0235 (1 HSPs)
scaffold0235 (144-252)||(13441-13549)
[»] scaffold0142 (2 HSPs)
scaffold0142 (144-272)||(7764-7893)
scaffold0142 (213-242)||(7670-7699)
[»] scaffold0098 (1 HSPs)
scaffold0098 (19-78)||(34227-34286)
[»] scaffold0015 (2 HSPs)
scaffold0015 (19-78)||(208761-208820)
scaffold0015 (19-78)||(208727-208787)
[»] scaffold1792 (1 HSPs)
scaffold1792 (144-250)||(309-414)
[»] scaffold0230 (1 HSPs)
scaffold0230 (144-250)||(23486-23591)
[»] scaffold0261 (1 HSPs)
scaffold0261 (178-266)||(18458-18546)
[»] scaffold0003 (1 HSPs)
scaffold0003 (310-361)||(95631-95683)
[»] scaffold0104 (1 HSPs)
scaffold0104 (25-80)||(13904-13959)
[»] scaffold0192 (1 HSPs)
scaffold0192 (213-242)||(9926-9955)
[»] scaffold1783 (1 HSPs)
scaffold1783 (20-80)||(64-123)


Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-109; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 133 - 361
Target Start/End: Complemental strand, 42560410 - 42560182
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42560410 accaacattagatcttcatgatattaatacgtcacaaccgcaaggtaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 42560311  T
Q  233 acaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctct 332  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  42560310 acaattacaatttcatatcaacgtatttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattattaatcatcttattcatcctct 42560211  T
Q  333 ctgaacctcattataatcattaacaactt 361  Q
    |||||||||||||||||||||||||||||    
T  42560210 ctgaacctcattataatcattaacaactt 42560182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 21580058 - 21579861
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  21580058 tcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataattatcatatataacaattacaacttcatatcaacgtctttcac 21579959  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    |||||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21579958 aatatataaatattttcacatttaatcatcaaagtaaatcattaatattaatcatcttattcatcctctctgaacctcattataatcattaacaactt 21579861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 29763719 - 29763523
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| || || |||| ||  ||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29763719 tcacaacagcaagacatcatcatttaaacatatgcagcaa-tcaccatcgataataatcatcatatataacaattacaacttcatatcaacgtctttcac 29763621  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    |||||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29763620 aatatataaatattttcacatttaatcatcaaagtaaatcattaatattaatcatcttattcatcctctctgaacctcattataatcattaacaactt 29763523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 144 - 361
Target Start/End: Original strand, 18760515 - 18760732
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| ||     
T  18760515 atcttaatgatattaatacatcacaatagcaaggcatcaccattaaataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattataac 18760614  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcat 343  Q
    ||||||||||| ||||||||||||||||||| |||| |||||| |||||| |  |||| |  || ||||||||||||||||||  |||||||||||||||    
T  18760615 ttcatatcaacatctttcacaatatataaatcttttcacatttaatcatctacttaaacccacaatattaatcatcttattcatactctctgaacctcat 18760714  T
Q  344 tataatcattaacaactt 361  Q
    ||||||||||||||||||    
T  18760715 tataatcattaacaactt 18760732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 193 - 295
Target Start/End: Original strand, 32807294 - 32807396
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  32807294 atatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 32807393  T
Q  293 caa 295  Q
    |||    
T  32807394 caa 32807396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 164 - 359
Target Start/End: Complemental strand, 41680974 - 41680792
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    |||||||  |||| || ||||||| ||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  41680974 tcacaacaacaagacatcaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttgatatcaatatctttcac 41680875  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaac 359  Q
    |||||||||||||||| ||||||             |||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  41680874 aatatataaatattttcacattt-------------aatcatcaatataaatcatcttattcatcctctttgaacctcattataatcattaacaac 41680792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 27472550 - 27472391
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||||||     
T  27472550 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaac 27472451  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatca 304  Q
    ||||||||||| |||||||||||||||||||||| | ||| || |||||||||||||||||    
T  27472450 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 27472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 42560611 - 42560492
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    ||||| |||||||  ||||||||||| | || |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  42560611 agtaagagtacacaacctcttataaaaacgacaagtaagagtaaaccacctcttataaaacacctgacataaacaatcaccaacgatggctacaactacg 42560512  T
Q  119 acatcaacaacaacaccaac 138  Q
    ||||||||||||||||||||    
T  42560511 acatcaacaacaacaccaac 42560492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 1327279 - 1327119
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||||||     
T  1327279 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaac 1327180  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| || ||||||||||||||||||| | ||| || ||||||||||||||||||    
T  1327179 ttcatatcaacatcgttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcat 1327119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 38550245 - 38550086
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||| ||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||||||     
T  38550245 atcttaatgatattaatacatcacatcagcaagacaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaac 38550146  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatca 304  Q
    ||||||||||| |||||||||||||||||||||| | ||| || |||||||||||||||||    
T  38550145 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 38550086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21328832 - 21328970
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaacacctgacataaacaaccacc 99  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || ||||||||||||| | ||||||||||||| ||||||||||||||| ||||    
T  21328832 cctcttataaaaacgacaagtaagagtacaccacctcttataaaaacgacaaagtaagagtacacaacctcttataaaatacctgacataaacaatcacc 21328931  T
Q  100 aacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||| | ||||| ||||||||| |||||||||||||||||    
T  21328932 aacaacggctacaactacgacttcaacaacaacaccaac 21328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 16197698 - 16197818
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactac 117  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||| | ||||    
T  16197698 agtaagagtacaccacctcttataaaaacgacaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacagctac 16197797  T
Q  118 gacatcaacaacaacaccaac 138  Q
    ||| |||||||| ||||||||    
T  16197798 gacttcaacaacgacaccaac 16197818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 39936906 - 39936813
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  39936906 gcaaggcagcaccattaaataatatgcagcaagtcaacattaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 39936813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 276
Target Start/End: Complemental strand, 20982879 - 20982747
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| ||||||| | |||||| |||||||||| ||||||||||  ||| ||| |||||||     
T  20982879 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaaatcaacatcaacaataatcatctaatacaaccattacaac 20982780  T
Q  244 ttcatatcaacgtctttcacaatatataaatat 276  Q
    ||||||||||  |||||||||||||||| ||||    
T  20982779 ttcatatcaatatctttcacaatatatatatat 20982747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 6102622 - 6102532
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataac 234  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||| |||||||    
T  6102622 atcttaatgatattaatacatcacaacagcaaggcaacaccattaaataatatggagcaagtcaacatcaacaacaatcatcaaatataac 6102532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 22005607 - 22005469
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa-cacctgacataaacaaccac 98  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || ||||||||||||| ||||||||||||||| || || |||||||||| |||    
T  22005607 cctcttataaaaacgacaagtaagagtacaccacctcttataaagacgacaaagtaagagtacaccacctcttataaaaacatctaacataaacaatcac 22005508  T
Q  99 caacgatggctaaaactacgacatcaacaacaacaccaa 137  Q
    |||| | || || ||||||||| ||||||||||||||||    
T  22005507 caacaacggatacaactacgacttcaacaacaacaccaa 22005469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21980610 - 21980471
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa-cacctgacataaacaaccac 98  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||  || ||||||||||||| ||||||||||||||| || || |||||||||| |||    
T  21980610 cctcttataaaaacgacaagtaagagtacaccacctcttataaagccgacaaagtaagagtacaccacctcttataaaaacatctaacataaacaatcac 21980511  T
Q  99 caacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    |||| | || || ||||||||| |||||||||||||||||    
T  21980510 caacaacggatacaactacgacttcaacaacaacaccaac 21980471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21985593 - 21985454
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa-cacctgacataaacaaccac 98  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||  || ||||||||||||| ||||||||||||||| || || |||||||||| |||    
T  21985593 cctcttataaaaatgacaagtaagagtacacctcctcttataaagccgacaaagtaagagtacaccacctcttataaaaacatctaacataaacaatcac 21985494  T
Q  99 caacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    |||| | || || ||||||||| |||||||||||||||||    
T  21985493 caacaacggatacaactacgacttcaacaacaacaccaac 21985454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 22000628 - 22000490
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttat-aaaacacctgacataaacaaccac 98  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || ||||||||||||| ||||||||||| |||||| || |||||||||| |||    
T  22000628 cctcttataaaaacgacaagtaagagtacaccacctcttataaagacgacaaagtaagagtacaccacctcttataaaaacatctaacataaacaatcac 22000529  T
Q  99 caacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    |||| | || | |||||||||| |||||||||||||||||    
T  22000528 caacaacggat-aaactacgacttcaacaacaacaccaac 22000490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 3273212 - 3273336
Alignment:
Q  236 attacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctg 335  Q
    ||||||| |||||| |||| | ||||||||||||||||| |||  |||||| ||||||||  ||||||   |  |||||||||||||||||  |||||||    
T  3273212 attacaacttcataccaacatttttcacaatatataaatctttc-acatttaatcatcaacttaaatccataacattaatcatcttattcatactctctg 3273310  T
Q  336 aacctcattataatcattaacaactt 361  Q
    ||||||||||||||||||||||||||    
T  3273311 aacctcattataatcattaacaactt 3273336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11774631 - 11774708
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||| || |||||||||||| |||||||||||||||    
T  11774631 cctcttataaagacaacgagtaagagtacaccacctcttataaagacgacaagtaagagtacaccacctcttataaaa 11774708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 8414787 - 8414649
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccacc 99  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||| | || |||||||||||| || ||||||||| ||||| || || | | ||| |||     
T  8414787 cctcttataaagacaacgagtaagagtacaccacctcttataaaaacgacaagtaagagtacaccccctcttatagaaacatctaacctgatcaatcact 8414688  T
Q  100 aacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||| | || || ||||||||| |||||||||||||||||    
T  8414687 aacaacggatacaactacgacttcaacaacaacaccaac 8414649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 314
Target Start/End: Original strand, 39833842 - 39834023
Alignment:
Q  135 caacattcgatcttcatgatattaatatgtcacaaccgcaaggcaa-caccattaaataatatgcagcaagtcaacatcaataataatcatcatatataa 233  Q
    ||||||| |||||||||||||||||||  ||||| | ||||||||| || |||| ||  |||| |||| ||| | |||||||||||||| ||||||||||    
T  39833842 caacattagatcttcatgatattaatacatcacatcagcaaggcaatcatcatttaaacatatacagcgagtaaccatcaataataatcttcatatataa 39833941  T
Q  234 -caattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaa 314  Q
     || || ||| |||||||||||  | |||||  |||||| || |||| |||||| |||||||| |||||||| || ||||||    
T  39833942 ccatttgcaacttcatatcaacaacattcacgttatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaa 39834023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 21415314 - 21415211
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||||||| ||||| || ||  |||||||||| |||||||     
T  21415314 tcacaacagcaaggcaacatcatataataataagcagcaagtcaacaacaataataatcatcatatacaacaagtataa-ctcatatcaacatctttcat 21415216  T
Q  264 aatat 268  Q
    |||||    
T  21415215 aatat 21415211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 44494002 - 44493864
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctctta-taaaacacctgacataaacaaccacc 99  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | |||||||||| ||||||||||  |||||| ||||||| | ||| ||||    
T  44494002 cctcttataaaaacgacaagtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttacaaaaacatctgacatgatcaatcacc 44493903  T
Q  100 aacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||| | ||  | ||||||||| |||||||||||||||||    
T  44493902 aacaacggacacaactacgacttcaacaacaacaccaac 44493864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 19128110 - 19128160
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatc 222  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  19128110 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatc 19128160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44494068 - 44493991
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | |||||||||| |||||||||||||||    
T  44494068 cctcttataaaaacgacaagtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaaa 44493991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 11251949 - 11251829
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa-cacctgacataaacaaccaccaacgatggctaaaactac 117  Q
    ||||| |||||| | ||||||||||| | || |||||||||||| ||||||||||||||| || || || | | ||| ||||||| | || ||  |||||    
T  11251949 agtaagagtacatcacctcttataaaaacgacaagtaagagtacaccacctcttataaaaacatctaacctgatcaatcaccaacaacggatactactac 11251850  T
Q  118 gacatcaacaacaacaccaac 138  Q
    ||| |||||||||||||||||    
T  11251849 gacttcaacaacaacaccaac 11251829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 21328783 - 21328843
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||| |||||||||||||||    
T  21328783 agtaagagtacaccacctcttataaagacgacaaagtaagagtacaccacctcttataaaa 21328843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44494035 - 44493959
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||||||||  ||  |||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  44494035 cctcttataaagacgacacgtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 44493959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 21328817 - 21328876
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  21328817 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaa 21328876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 21967852 - 21967793
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  21967852 agtaagagtacacctcctcttataaaaacgacaagtaagagtacaccacctcttataaaa 21967793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 21980692 - 21980633
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  21980692 agtaagagtacacctcctcttataaaaacgacaagtaagagtacaccacctcttataaaa 21980633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 21985675 - 21985616
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  21985675 agtaagagtacacctcctcttataaaaacgacaagtaagagtacaccacctcttataaaa 21985616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 22009056 - 22008997
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  22009056 agtaagagtacacctcctcttataaaaacgacaagtaagagtacaccacctcttataaaa 22008997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 34950370 - 34950489
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttat-aaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    |||| |||||||| | ||||||||| | || | |||||||||| ||||||||||| |||||| || |||| | ||| ||||||| | || || |||||||    
T  34950370 gtaagagtacaccacatcttataaaaacgacacgtaagagtacaccacctcttataaaaacatctaacatgatcaatcaccaacaacggatacaactacg 34950469  T
Q  119 acatcaacaacaacaccaac 138  Q
    |  |||||||||||||||||    
T  34950470 aattcaacaacaacaccaac 34950489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 21980625 - 21980567
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  21980625 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 21980567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21980677 - 21980599
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || ||||||||||||| |||||||||||||||    
T  21980677 cctcttataaaaacgacaagtaagagtacaccacctcttataaaaacgataaagtaagagtacaccacctcttataaaa 21980599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21985660 - 21985582
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || ||||||||||||| |||||||||||||||    
T  21985660 cctcttataaaaacgacaagtaagagtacaccacctcttataaaaacgataaagtaagagtacaccacctcttataaaa 21985582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 22000643 - 22000585
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  22000643 agtaagagtacacctcctcttataaaaacgacaagtaagagtacaccacctcttataaa 22000585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34950286 - 34950364
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    ||||||||||| |  || ||||| ||| |||| ||||||||||||| || | |||||||||| ||||||||||||||||    
T  34950286 cctcttataaaaacgacaagtaagagtgcaccacctcttataaagacgacacgtaagagtacaccacctcttataaaac 34950364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11774664 - 11774740
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||||||||  || ||||| |||||||| |||||||||||   || ||||||||||||  |||||||||||||    
T  11774664 cctcttataaagacgacaagtaagagtacaccacctcttataaaagcgacaagtaagagtacatcacctcttataaa 11774740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 11774715 - 11774835
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccaccaacgatggctaaaactac 117  Q
    ||||| |||||| | ||||||||||||| || | |||||||||| |||||||||||| ||||| || |||| | ||| || |||| |  | || ||||||    
T  11774715 agtaagagtacatcacctcttataaagacgacacgtaagagtacaccacctcttatagaaacatctaacatgatcaatcatcaacaacagatacaactac 11774814  T
Q  118 gacatcaacaacaacaccaac 138  Q
     || |||||||||||||||||    
T  11774815 aacttcaacaacaacaccaac 11774835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 22005616 - 22005564
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  22005616 agtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 22005564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 8414802 - 8414743
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| |||||||||||||  |  ||||||||||| |||||||||||||||    
T  8414802 agtaagagtacaccacctcttataaagacaacgagtaagagtacaccacctcttataaaa 8414743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 21328749 - 21328808
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||| ||||||||||||||    
T  21328749 agtaagagtacaccacctcttataaaaacgacaaagtaagagtacaccacctcttataaa 21328808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 8414835 - 8414777
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||  | || |||||||||||| ||||||||||||||    
T  8414835 agtaagagtacaccacctcttataacaacgacaagtaagagtacaccacctcttataaa 8414777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 11774583 - 11774641
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||  | || |||||||||||| ||||||||||||||    
T  11774583 agtaagagtacaccacctcttataacaacgacaagtaagagtacaccacctcttataaa 11774641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 11774616 - 11774674
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| |||||||||||||  |  ||||||||||| ||||||||||||||    
T  11774616 agtaagagtacaccacctcttataaagacaacgagtaagagtacaccacctcttataaa 11774674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 21985608 - 21985550
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| || |||||||||||    
T  21985608 agtaagagtacaccacctcttataaaaatgacaagtaagagtacacctcctcttataaa 21985550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 44494083 - 44494025
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||  ||||||||||| | || |||||||||||| ||||||||||||||    
T  44494083 agtaagagtacacgacctcttataaaaacgacaagtaagagtacaccacctcttataaa 44494025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 21980760 - 21980700
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaa--aagtaagagtacgccacctcttataaaa 78  Q
    |||| |||||||| ||||||||||| || ||  |||||||||||| |||||||||||||||    
T  21980760 gtaagagtacaccacctcttataaacaacaacaaagtaagagtacaccacctcttataaaa 21980700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 21985743 - 21985683
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaa--aagtaagagtacgccacctcttataaaa 78  Q
    |||| |||||||| ||||||||||| || ||  |||||||||||| |||||||||||||||    
T  21985743 gtaagagtacaccacctcttataaacaacaacaaagtaagagtacaccacctcttataaaa 21985683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 22000711 - 22000651
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaa--aagtaagagtacgccacctcttataaaa 78  Q
    |||| |||||||| ||||||||||| || ||  |||||||||||| |||||||||||||||    
T  22000711 gtaagagtacaccacctcttataaacaacaacaaagtaagagtacaccacctcttataaaa 22000651  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 22352677 - 22352785
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctga-cataaacaaccaccaacgatggctaaaactacgacatc 123  Q
    |||||||| ||||||||||| || ||  |||||| ||| ||| ||||||||||||| |||| ||||||||  ||||||| |  |||  ||||||||| ||    
T  22352677 agtacaccacctcttataaacaacaac-gtaagactacaccatctcttataaaacaactgaacataaacagtcaccaacaacagcttcaactacgacttc 22352775  T
Q  124 aacaacaaca 133  Q
    ||||||||||    
T  22352776 aacaacaaca 22352785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 42560677 - 42560617
Alignment:
Q  18 gagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    |||||| |||||||| ||||||||||| || ||  |||||||||| ||||||||||||||||    
T  42560677 gagtaagagtacaccacctcttataaacaacaac-gtaagagtacaccacctcttataaaac 42560617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 16197665 - 16197724
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||| |||||||||||||||    
T  16197665 agtaagagtacaccacctcttataaa-acgacaaagtaagagtacaccacctcttataaaa 16197724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 19139966 - 19140014
Alignment:
Q  217 ataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  19139966 ataatcatccaatataaccattacaacttcatatcaacatctttcacaa 19140014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 21967886 - 21967826
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||| || ||||||||||||    
T  21967886 agtaagagtacaccacctcttataaaaacgataaagtaagagtacacctcctcttataaaa 21967826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 21980726 - 21980666
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||| || ||||||||||||    
T  21980726 agtaagagtacaccacctcttataaaaacgataaagtaagagtacacctcctcttataaaa 21980666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 21985709 - 21985649
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||| || ||||||||||||    
T  21985709 agtaagagtacaccacctcttataaaaacgataaagtaagagtacacctcctcttataaaa 21985649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 22000677 - 22000617
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||| || ||||||||||||    
T  22000677 agtaagagtacaccacctcttataaaaacgataaagtaagagtacacctcctcttataaaa 22000617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 22009090 - 22009030
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||| || ||||||||||||    
T  22009090 agtaagagtacaccacctcttataaaaacgataaagtaagagtacacctcctcttataaaa 22009030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 23450822 - 23450854
Alignment:
Q  329 ctctctgaacctcattataatcattaacaactt 361  Q
    |||||| ||||||||||||||||||||||||||    
T  23450822 ctctctcaacctcattataatcattaacaactt 23450854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 24495934 - 24495966
Alignment:
Q  329 ctctctgaacctcattataatcattaacaactt 361  Q
    |||||| ||||||||||||||||||||||||||    
T  24495934 ctctctcaacctcattataatcattaacaactt 24495966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 34301900 - 34301932
Alignment:
Q  329 ctctctgaacctcattataatcattaacaactt 361  Q
    |||||| ||||||||||||||||||||||||||    
T  34301900 ctctctcaacctcattataatcattaacaactt 34301932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 34950277 - 34950329
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||| ||||||||||| | || |||||||||| | ||||||||||||||    
T  34950277 agtacaccacctcttataaaaacgacaagtaagagtgcaccacctcttataaa 34950329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 133 - 361
Target Start/End: Original strand, 15213668 - 15213896
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15213668 accaacattagatcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 15213767  T
Q  233 acaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctct 332  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  15213768 acaattacaatttcatatcaatgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattattaatcatcttattcatcctct 15213867  T
Q  333 ctgaacctcattataatcattaacaactt 361  Q
    || ||||||||||||||||||||||||||    
T  15213868 ctaaacctcattataatcattaacaactt 15213896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 178 - 361
Target Start/End: Original strand, 11085013 - 11085196
Alignment:
Q  178 caacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatt 277  Q
    |||||||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11085013 caacaccatttaatcgtatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatagt 11085112  T
Q  278 tttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    || |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  11085113 ttcacatttaatcatcaaagtaaatcatcaatattaatcatcttattcatcctctctgaacctcattataatcattaataactt 11085196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 194 - 361
Target Start/End: Original strand, 11092767 - 11092934
Alignment:
Q  194 tatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatc 293  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  11092767 tatgcaacaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacatctttcacaatatataaatattttcacatttaatcatc 11092866  T
Q  294 aaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  11092867 aaagtaaatcatcaatattaatcatcttattcacactctctgaacctcattataatcattaataactt 11092934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 164 - 358
Target Start/End: Complemental strand, 30821108 - 30820914
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    |||||||  |||| ||||| |||| ||  ||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  30821108 tcacaacaacaagacaacatcatttaaacatatgcagcaagttaccatcaataataatcatcatatataacaattacaacttcatatcaacgtatttcac 30821009  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaa 358  Q
    |||||||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30821008 aatatataaatattttcacatttaatcatcaaagtaaaacatcaatattaatcatcttattcatcctctctgaacctcattataatcattaacaa 30820914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 164 - 358
Target Start/End: Complemental strand, 36686102 - 36685908
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  36686102 tcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattaaaacttcatatcagcgtctttcac 36686003  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaa 358  Q
    |||||||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  36686002 aatatataaatattttcacatttaatcatcaaagtaaaacatcaatattaatcatcttattcatcctctgtgaacctcattataatcattaacaa 36685908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 193 - 322
Target Start/End: Complemental strand, 9320552 - 9320423
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  9320552 atatgcaacaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 9320453  T
Q  293 caaagtaaatcatcattattaatcatctta 322  Q
    |||| |||||||||| ||||||||||||||    
T  9320452 caaaataaatcatcaatattaatcatctta 9320423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 38480237 - 38480376
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38480237 tcacaacagcaagacaacatcatttaaatatatgcagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcac 38480336  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatc 303  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  38480337 aatatataaatattttcacatttaatcatcaaagtaaatc 38480376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 144 - 357
Target Start/End: Complemental strand, 37727799 - 37727585
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||| ||| ||| |||||||     
T  37727799 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatcaaatacaaccattacaac 37727700  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattatt-aatcatcttattcaccctctctgaacctca 342  Q
    |||||||| ||  |||||||| |||||| || |||| |||||| |||||||| ||||| || || |||| |||||||||| ||| |||||||||||||||    
T  37727699 ttcatatctacaactttcacattatatagatcttttcacatttaatcatcaacgtaaagcaacaatattaaatcatcttaatcatcctctctgaacctca 37727600  T
Q  343 ttataatcattaaca 357  Q
    |||||||||||||||    
T  37727599 ttataatcattaaca 37727585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 8468294 - 8468454
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||||||     
T  8468294 atcttaatgatattaatacatcacatcagcaaggcaacaccattaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaac 8468393  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| |||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  8468394 ttcatatcaacatctttcacaatatataaatattatcaca-ttaatcatcaaagtaaatcat 8468454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 14270298 - 14270138
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||||||     
T  14270298 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaac 14270199  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| |||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  14270198 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcat 14270138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 45847894 - 45847735
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||||||     
T  45847894 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaac 45847795  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatca 304  Q
    ||||||||||| |||||||||||||||||||||| | ||| || |||||||||||||||||    
T  45847794 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 45847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 9389958 - 9389829
Alignment:
Q  137 acattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaa 236  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||| ||| |    
T  9389958 acattagatcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataatatgtagcaagtcaacatcaacaataatcgtcaaatacaacca 9389859  T
Q  237 ttacaatttcatatcaacgtctttcacaat 266  Q
    |||| | ||||||| | | |||||||||||    
T  9389858 ttacgacttcatataagcatctttcacaat 9389829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 13892399 - 13892536
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccacca 100  Q
    ||||||||||| |  || ||||| ||| |||| ||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13892399 cctcttataaaaacgacaagtaagagtccaccacctcttataaaaacgacaagtaagagtacgccacctcttataaaacacctgacataaacaatcacca 13892498  T
Q  101 acgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    || | ||||| ||||||||| |||||||||||||||||    
T  13892499 acaacggctacaactacgacttcaacaacaacaccaac 13892536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 17232488 - 17232648
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| ||||||||| ||||||||||||| ||| ||||||||||  ||| ||| ||| |||     
T  17232488 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatatacagcaagtcaacagcaacaataatcatctaatacaaccattccaac 17232587  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| |||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  17232588 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcat 17232648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 209 - 355
Target Start/End: Original strand, 15439330 - 15439477
Alignment:
Q  209 catcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcat 308  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||   |||| || |||| |||||| |||||||| |||||||| ||     
T  15439330 catcaataataatcttcatatataacaattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaa 15439429  T
Q  309 tatt-aatcatcttattcaccctctctgaacctcattataatcattaa 355  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  15439430 tattaaatcatcttagtcatcctctctgaacctcattataatcattaa 15439477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 15213468 - 15213586
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||| | ||||||||||| | || |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  15213468 gtaagagtacatcacctcttataaaaacgacaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacgatggctaccactacga 15213567  T
Q  120 catcaacaacaacaccaac 138  Q
    ||| |||||||||||||||    
T  15213568 cataaacaacaacaccaac 15213586  T

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Target: chr7; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 25 - 138
Target Start/End: Original strand, 29003819 - 29003932
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatca 124  Q
    |||||||| ||||||||||| | || |||||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||| |||    
T  29003819 agtacaccacctcttataaacaggacaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacgacttca 29003918  T
Q  125 acaacaacaccaac 138  Q
    ||||||||||||||    
T  29003919 acaacaacaccaac 29003932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 12371434 - 12371527
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  12371434 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 12371527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 34957163 - 34957282
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    ||||| |||||||| ||||||||||  | || |||||||||||| ||||||||||||||||||||||||||||||| ||||||| | || || |||||||    
T  34957163 agtaagagtacaccacctcttataacaacgacaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggttacaactacg 34957262  T
Q  119 acatcaacaacaacaccaac 138  Q
    || |||||||||||||||||    
T  34957263 acttcaacaacaacaccaac 34957282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 172 - 274
Target Start/End: Complemental strand, 8852061 - 8851959
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||||| ||||||| || |||||||  ||||||||||||||||    
T  8852061 gcaaggcaacaccattaaataatatgcagtaagtcaacatcaacaataatcatcccatataaccattacaactttatatcaaaatctttcacaatatata 8851962  T
Q  272 aat 274  Q
    |||    
T  8851961 aat 8851959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 13148368 - 13148275
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  13148368 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatctaatataaccattacaacttcatatcaacatctttcacaa 13148275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 323
Target Start/End: Complemental strand, 11392009 - 11391870
Alignment:
Q  185 attaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattt-ttaca 283  Q
    |||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||| ||| | | ||||||||||||||||||| |||  ||||    
T  11392009 attaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctttcgtaca 11391910  T
Q  284 ttttatcatcaaagtaaatcatcattattaatcatcttat 323  Q
    ||| ||||||||  ||||||  ||  ||||||||||||||    
T  11391909 tttaatcatcaatttaaatccacaacattaatcatcttat 11391870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 11066624 - 11066717
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| |||||||||||||||||||||||||||||| ||| ||| ||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  11066624 gcaaggcagcaccattaaataatatgcagcaagtcaacaacaacaatgatcatccaatataactattacaacttcatatcaacatctttcacaa 11066717  T

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Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41283913 - 41283990
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||| || |||||||||||| |||||||||||||||    
T  41283913 cctcttataaagacaacgagtaagagtacaccacctcttataaagacgacaagtaagagtacaccacctcttataaaa 41283990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 12128060 - 12127967
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| ||||||||| |||||||||| ||||||||||||| ||||||| ||  ||||| | ||||||| ||||||| ||| ||||||||||    
T  12128060 gcaaggcagcaccattaactaatatgcagtaagtcaacatcaacaataatcgtccaatatatccattacaacttcatataaacatctttcacaa 12127967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 18302035 - 18302163
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||| ||| ||||||| | || |||| ||||||||| ||||||||||| ||| ||  |||||||     
T  18302035 atcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacaacaagccaacatcaacaataatcatcaaatacaatcattacaac 18302134  T
Q  244 ttcatatcaacgtctttcacaatatataa 272  Q
    ||||||||| | || | ||||||||||||    
T  18302135 ttcatatcatcttcatccacaatatataa 18302163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 262
Target Start/End: Complemental strand, 32434485 - 32434396
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttca 262  Q
    |||||||| ||||||||||||| || ||| ||||||||||||  ||||||||||  ||||||| ||||||| ||||||||||| |||||||    
T  32434485 gcaaggcagcaccattaaataaaatccag-aagtcaacatcagcaataatcatccaatataaccattacaacttcatatcaacatctttca 32434396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11394521 - 11394449
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctctta 73  Q
    ||||||| ||||| ||||||||| |||||||| ||| ||||||||| || |||||||||||| ||||||||||    
T  11394521 cctcttagaaagacaacgagtaagagtacaccacctattataaagacgacaagtaagagtacaccacctctta 11394449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 59287 - 59232
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcat 227  Q
    ||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||    
T  59287 gcaaggcaacaacattaaataatatggagcaagtcaacatcaacaataaacatcat 59232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 833627 - 833543
Alignment:
Q  50 aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatcaacaacaacac 134  Q
    ||||||||||||| |||||||||| | |||||||||||||| ||  ||||||| |   ||| ||||||||| |||||||||||||    
T  833627 aaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacaactacaactacgacttcaacaacaacac 833543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 837623 - 837539
Alignment:
Q  50 aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatcaacaacaacac 134  Q
    ||||||||||||| |||||||||| |||||||||| ||||| ||  ||||||| |   ||| ||||||||| |||||||||||||    
T  837623 aaagtaagagtacaccacctcttacaaaacacctgccataatcattcaccaacaacaactacaactacgacttcaacaacaacac 837539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 1198807 - 1198723
Alignment:
Q  50 aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatcaacaacaacac 134  Q
    ||||||||||||| |||||||||| | |||||||||||||| ||  ||||||| |   ||| ||||||||| |||||||||||||    
T  1198807 aaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacaactacaactacgacttcaacaacaacac 1198723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 1202803 - 1202719
Alignment:
Q  50 aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatcaacaacaacac 134  Q
    ||||||||||||| |||||||||| |||||||||| ||||| ||  ||||||| |   ||| ||||||||| |||||||||||||    
T  1202803 aaagtaagagtacaccacctcttacaaaacacctgccataatcattcaccaacaacaactacaactacgacttcaacaacaacac 1202719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16185758 - 16185834
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | |||||||||| ||||||||||||||    
T  16185758 cctcttataaaaacgacaagtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaa 16185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 16251768 - 16251709
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  16251768 agtaagagtacaccacctcttataaaaatgacaagtaagagtacaccacctcttataaaa 16251709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 11394738 - 11394680
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  11394738 agtaagagtacaccacctcttataaaaatgacaagtaagagtacaccacctcttataaa 11394680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 16185743 - 16185801
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  16185743 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 16185801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16251753 - 16251675
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| |  | |||||||||||| ||||||||||||||||    
T  16251753 cctcttataaaaatgacaagtaagagtacaccacctcttataaaaataacaagtaagagtacaccacctcttataaaac 16251675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16251819 - 16251742
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| | ||| ||||| |||||||| ||||||||||| | || ||||||||||||| |||||||||||||||    
T  16251819 cctcttataaaaacaacaagtaagagtacaccacctcttataaa-acgacaaagtaagagtacaccacctcttataaaa 16251742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41283946 - 41284023
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||||||||||||  || ||||| |||||||| |||||||||||   || | |||||||||| |||||||||||||||    
T  41283946 cctcttataaagacgacaagtaagagtacaccacctcttataaaagcgacatgtaagagtacaccacctcttataaaa 41284023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 41283998 - 41284055
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  41283998 gtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 41284055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 16251834 - 16251774
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    ||||| |||||||| ||||||||||| |  | |||||||||||| ||||||||||||||||    
T  16251834 agtaagagtacaccacctcttataaaaacaacaagtaagagtacaccacctcttataaaac 16251774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 41284012 - 41284140
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccacc 99  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | ||||||||||  ||||||||||| ||||| || || | | ||| ||||    
T  41284012 cctcttataaaaacgacaagtaagagtacaccacctcttataaagatgacacgtaagagtacatcacctcttatagaaacatctaacctgatcaatcacc 41284111  T
Q  100 aacgatggctaaaactacgacatcaacaa 128  Q
    ||| | || || ||||||||| |||||||    
T  41284112 aacaacggatacaactacgacttcaacaa 41284140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11394690 - 11394615
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataa 76  Q
    |||||||||||||  ||  |||| |||||||| ||||||||| | | || |||||||||||| |||||||||||||    
T  11394690 cctcttataaagacgacacgtaagagtacaccgcctcttatagacacgacaagtaagagtacaccacctcttataa 11394615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 16251669 - 16251610
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||| | ||||||||||| | || |||||||||||| |||||||||||||||    
T  16251669 agtaagagtacatcacctcttataaaaatgacaagtaagagtacaccacctcttataaaa 16251610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11394723 - 11394649
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata 75  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | |||||||||| || |||||||||    
T  11394723 cctcttataaaaatgacaagtaagagtacaccacctcttataaagacgacacgtaagagtacaccgcctcttata 11394649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 14416548 - 14416439
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaacgatggctaaaactacgacatc 123  Q
    |||||||| |||||||||||  |  || |||||||||| |||||||||| ||| |||||| |||||||||  ||||||| |  |||  ||||||||| ||    
T  14416548 agtacaccacctcttataaaacaacaacgtaagagtacaccacctcttacaaa-cacctggacataaacagtcaccaacaacagcttcaactacgacttc 14416450  T
Q  124 aacaacaacac 134  Q
    |||||||||||    
T  14416449 aacaacaacac 14416439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16251720 - 16251643
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| | ||| ||||| |||||||| ||||||||||| | || |||||||||||||  ||||||||||||||    
T  16251720 cctcttataaaaataacaagtaagagtacaccacctcttataaa-acgacaaagtaagagtacatcacctcttataaaa 16251643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 41283865 - 41283923
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||  | || |||||||||||| ||||||||||||||    
T  41283865 agtaagagtacaccacctcttataacaacgacaagtaagagtacaccacctcttataaa 41283923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 41283898 - 41283956
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| |||||||||||||  |  ||||||||||| ||||||||||||||    
T  41283898 agtaagagtacaccacctcttataaagacaacgagtaagagtacaccacctcttataaa 41283956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 39267741 - 39267712
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  39267741 aataataatcatcatatataacaattacaa 39267712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 9320797 - 9320738
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaaca 80  Q
    |||| |||||||| ||||||||||| || ||  |||||||||| |||||||||||||||||    
T  9320797 gtaagagtacaccacctcttataaacaataac-gtaagagtacaccacctcttataaaaca 9320738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 12556688 - 12556743
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataa 76  Q
    ||||||||||||| ||||||||||| ||  || |||||||||| |||||||||||||    
T  12556688 gtaatagtacaccacctcttataaacaa-caacgtaagagtacaccacctcttataa 12556743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 15116237 - 15116297
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaaca 80  Q
    |||| |||||||| |||||||||||  |  || |||||||||| |||||||||||||||||    
T  15116237 gtaagagtacaccacctcttataaaacaacaacgtaagagtacaccacctcttataaaaca 15116297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 15213296 - 15213359
Alignment:
Q  19 agtaatagtacaccccctcttataaagaa--ga-aaagtaagagtacgccacctcttataaaac 79  Q
    ||||| |||||||| ||||||||||| ||  || ||||||||||||| ||||||||||||||||    
T  15213296 agtaagagtacaccacctcttataaaaaaacgacaaagtaagagtacaccacctcttataaaac 15213359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 16251571 - 16251519
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctct 71  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||    
T  16251571 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctct 16251519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16251654 - 16251578
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || |||||||||||| ||  ||||||||||    
T  16251654 cctcttataaaaatgacaagtaagagtacaccacctcttataaaaacgacaagtaagagtacaccgtctcttataaa 16251578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 16251860 - 16251808
Alignment:
Q  27 tacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    |||||| ||||||||||| | || ||||||||||||| |||||||||||||||    
T  16251860 tacaccacctcttataaaaacgacaaagtaagagtacaccacctcttataaaa 16251808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 201; Significance: 1e-109; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 133 - 361
Target Start/End: Original strand, 36460139 - 36460367
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36460139 accaacattagatcttcatgatattaatatgtcacaaccgcaagacaacaccattaaataatatgcagcaagtcaacattaataataatcatcatatata 36460238  T
Q  233 acaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctct 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  36460239 acaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattattaatcatcttgttcatcctct 36460338  T
Q  333 ctgaacctcattataatcattaacaactt 361  Q
    |||||||||||||||||||||||||||||    
T  36460339 ctgaacctcattataatcattaacaactt 36460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 12122373 - 12122176
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| || || |||| ||  |||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12122373 tcacaacagcaagacatcatcatttaaacatatgccgcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcac 12122274  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    |||||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12122273 aatatataaatattttcacatttaatcatcaaagtaaatcattaatattaatcatcttattcatcctctctgaacctcattataatcattaacaactt 12122176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 172 - 358
Target Start/End: Complemental strand, 21557889 - 21557703
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    ||||| ||||| |||| ||  |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21557889 gcaagacaacatcatttaaacatatgcagcaagtcactatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcacaatatata 21557790  T
Q  272 aatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaa 358  Q
    |||||||| |||||| ||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21557789 aatattttcacatttaatcatcaaactaaaacatcaatattaatcatcttattcatcctctctgaacctcattataatcattaacaa 21557703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 164 - 354
Target Start/End: Complemental strand, 21555231 - 21555041
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  21555231 tcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaactttatgtcaacgtctttcac 21555132  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcatta 354  Q
    |||||||||||||||| |||||| ||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  21555131 aatatataaatattttcacatttaatcatcaaactaaaacatcaatattaatcatcttattcatcctctctgaacctcattatcatcatta 21555041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 193 - 361
Target Start/End: Original strand, 30615785 - 30615952
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||||||||||||| ||||| ||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||    
T  30615785 atatgcagcaagtcaccatcattaataatcatcaattataacaattacaacttcatatcaacgtctttcacaatatataa-tattttcacatttaatcat 30615883  T
Q  293 caaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
     ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  30615884 aaaagtaaattatcaatattaatcatcttattcatcctctctgaacctcattataatccttaacaactt 30615952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 164 - 352
Target Start/End: Original strand, 31455690 - 31455881
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatca---tcatatataacaattacaatttcatatcaacgtcttt 260  Q
    ||||||| ||||| ||||| |||| ||  ||||||||||||||| |||||||||||||||   |||| |||||| ||||||| ||||||||||||| |||    
T  31455690 tcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcaatatcatttataacgattacaacttcatatcaacgttttt 31455789  T
Q  261 cacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcat 352  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  31455790 cacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatattaatcatcttattcatcctctccgaacctcattataatcat 31455881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 193 - 322
Target Start/End: Original strand, 24212397 - 24212526
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  24212397 atatgcagcaagtcaccatcaatattaatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 24212496  T
Q  293 caaagtaaatcatcattattaatcatctta 322  Q
    ||||||||||||||| ||||||||||||||    
T  24212497 caaagtaaatcatcaatattaatcatctta 24212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 193 - 322
Target Start/End: Original strand, 35852652 - 35852781
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  35852652 atatgcagcaagccaccatcaataataatcatcgtatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 35852751  T
Q  293 caaagtaaatcatcattattaatcatctta 322  Q
    ||||||||||||||| ||||||||||||||    
T  35852752 caaagtaaatcatcaatattaatcatctta 35852781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 133 - 277
Target Start/End: Complemental strand, 21741798 - 21741653
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| |    
T  21741798 accaacattagatcttcatgatattaatacgtcacaaccgtaaggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcgtcaaataca 21741699  T
Q  233 acaattacaatttcatatcaacgtctttcacaa-tatataaatatt 277  Q
    || ||||| ||||||||| | | |||||||||| ||||||||||||    
T  21741698 accattacgatttcatataagcatctttcacaattatataaatatt 21741653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 164 - 338
Target Start/End: Original strand, 31455077 - 31455254
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatca---tcatatataacaattacaatttcatatcaacgtcttt 260  Q
    ||||||| ||||| ||||| |||| ||  ||||||| ||||||| |||||||||||||||   |||| |||||| ||||||| || |||||||||| |||    
T  31455077 tcacaacagcaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcaatatcatttataacgattacaacttaatatcaacgttttt 31455176  T
Q  261 cacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaac 338  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||| |||||| ||||    
T  31455177 cacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatattaatcatcttattcatcctctccgaac 31455254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 36459940 - 36460057
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||||| ||||||||||| || ||  |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  36459940 gtaagagtacaccacctcttataaacaacaat-gtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacgatggctacaactacga 36460038  T
Q  120 catcaacaacaacaccaac 138  Q
    |||||||||||||||||||    
T  36460039 catcaacaacaacaccaac 36460057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 5889429 - 5889269
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| ||||||| | |||||||||| |||||| ||||||||||| ||| ||| |||||||     
T  5889429 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcatcatcaacaataatcatcaaatacaaccattacaac 5889330  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||| | |||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  5889329 ttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcat 5889269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 29915327 - 29915167
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | |||||||||| ||||| |||||| | ||||||||||||||||| ||||||||||  ||| ||| |||||||     
T  29915327 atcttaatgatattaatacatcacatcagcaaggcaacgccattcaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaac 29915228  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| |||||||||||||||||||||| | ||| || |||||||||||| |||||    
T  29915227 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtagatcat 29915167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 193 - 355
Target Start/End: Complemental strand, 5889235 - 5889072
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    |||| |||||||| | |||||||||||||| |||| |||||||||| ||| | |||||||||  |||||||| |||||| || |||| |||||| |||||    
T  5889235 atatacagcaagtaaccatcaataataatcttcatgtataacaattgcaactacatatcaacaactttcacattatatagatcttttcacatttaatcat 5889136  T
Q  293 caaagtaaatcatcattatt-aatcatcttattcaccctctctgaacctcattataatcattaa 355  Q
    ||| |||||||| || |||| ||||||| || ||| |||||||||||||||||| |||||||||    
T  5889135 caacgtaaatcaacaatattaaatcatcataatcatcctctctgaacctcattagaatcattaa 5889072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 17875243 - 17875326
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatat 276  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||  || |||||||||||    
T  17875243 atatgcagcaagtcaccatcaataataatcatcatatataacaattagaacttcatatcaacgtctttatcattatataaatat 17875326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 43243567 - 43243448
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    ||||| |||||||| ||||||||||||| || | |||||||||| ||||||||||||||||| || |||| | ||| ||||||| | || || ||||||     
T  43243567 agtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactact 43243468  T
Q  119 acatcaacaacaacaccaac 138  Q
    || |||||||||||||||||    
T  43243467 acttcaacaacaacaccaac 43243448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 21871771 - 21871687
Alignment:
Q  188 aaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 272  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||| ||  ||||||| ||||||||| | || ||||||||||||||    
T  21871771 aaataatttgcagcaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatcatcatcattcacaatatataa 21871687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 21876051 - 21875967
Alignment:
Q  188 aaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 272  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||| ||  ||||||| ||||||||| | || ||||||||||||||    
T  21876051 aaataatttgcagcaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatcatcatcattcacaatatataa 21875967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 23538252 - 23538366
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||||| ||||||||||   |  || |||||||||| |||||||||| | |||||||||||||| ||  ||||||| | ||||| ||||||||    
T  23538252 gtaagagtacaccacctcttataacacaacaacgtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacga 23538351  T
Q  120 catcaacaacaacac 134  Q
    | |||||||||||||    
T  23538352 cttcaacaacaacac 23538366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 10816256 - 10816340
Alignment:
Q  50 aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatcaacaacaacac 134  Q
    ||||||||||||| |||||||||| | |||||||||||||| ||  ||||||| |  |||| ||||||||| |||||||||||||    
T  10816256 aaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacagctacaactacgacttcaacaacaacac 10816340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 33473623 - 33473503
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccaccaacgatggctaaaactac 117  Q
    ||||| |||||||| ||||||||||||| || |||||||||||| |||||||||||| ||||| || |||| | ||| || |||| |  | || ||||||    
T  33473623 agtaagagtacaccacctcttataaagacgacaagtaagagtacaccacctcttatagaaacatctaacatgatcaatcatcaacaacagatacaactac 33473524  T
Q  118 gacatcaacaacaacaccaac 138  Q
     || |||||||||||||||||    
T  33473523 aacttcaacaacaacaccaac 33473503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 19076272 - 19076349
Alignment:
Q  53 gtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaacgatggctaaaactacgacatcaacaac 129  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||||| |  |||  ||||||||| ||||||||    
T  19076272 gtaagagtacaccacctcttataaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 19076349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 43243617 - 43243542
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||||||||| | ||| ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  43243617 cctcttataaaaacaacaagtaagagtacaccacctcttataaa-acgacaagtaagagtacaccacctcttataaa 43243542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 31253036 - 31252979
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||| |||||||| ||||||||||||| || | |||||||||| ||||||||||||||    
T  31253036 gtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaa 31252979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 43243631 - 43243572
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    |||| |||||||| ||||||||||| |  | |||||||||||| ||||||||||||||||    
T  43243631 gtaagagtacaccacctcttataaaaacaacaagtaagagtacaccacctcttataaaac 43243572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 43243665 - 43243606
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || | |||||||||| |||||||||||||||    
T  43243665 agtaagagtacaccacctcttataaaaacgacacgtaagagtacaccacctcttataaaa 43243606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 33473656 - 33473598
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||  | || |||||||||||| ||||||||||||||    
T  33473656 agtaagagtacaccacctcttataacaacgacaagtaagagtacaccacctcttataaa 33473598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 21871622 - 21871593
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  21871622 aataataatcatcatatataacaattacaa 21871593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 21875902 - 21875873
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  21875902 aataataatcatcatatataacaattacaa 21875873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 22120246 - 22120217
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  22120246 aataataatcatcatatataacaattacaa 22120217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31253022 - 31252947
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||||||||  ||  |||| |||||||| ||||||||||| || ||  |||||||||| ||||||||||||||    
T  31253022 cctcttataaagacgacacgtaagagtacaccacctcttataaacaacaac-gtaagagtacaccacctcttataaa 31252947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 31253104 - 31253044
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||| ||| | || ||||||||||||| |||||||||||||||    
T  31253104 agtaagagtacaccacctcttagaaaaacgataaagtaagagtacaccacctcttataaaa 31253044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 133 - 361
Target Start/End: Original strand, 11912890 - 11913118
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  11912890 accaacattagatcttcatgaaattaatatgtcacaaccgcaaggcaacaccattaaataatatgcatcaagtcaacatcaataataataatcatatata 11912989  T
Q  233 acaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctct 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  11912990 acaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattattaatcatcttattcatcctct 11913089  T
Q  333 ctgaacctcattataatcattaacaactt 361  Q
    |||||||| ||||||||||||||||||||    
T  11913090 ctgaacctaattataatcattaacaactt 11913118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 164 - 358
Target Start/End: Complemental strand, 31224806 - 31224612
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31224806 tcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcac 31224707  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaa 358  Q
    | |||||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31224706 attatataaatattttcacatttaatcatcaaagtaaaacatcaatattaatcatcttattcatcctctctgaacctcattataatcattaacaa 31224612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 164 - 358
Target Start/End: Complemental strand, 15447849 - 15447658
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  ||||||| ||||||| ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||    
T  15447849 tcacaacagcaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcat---atataacaattacaacttcatatcaacgtctttcac 15447753  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaa 358  Q
    | ||||| |||||||| |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15447752 attatatgaatattttcacatttaatcatcaaagtaaatcatcaatattaatcatcttattcatcctctctgaacctcattataatcattaacaa 15447658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 49970124 - 49969963
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| |||||| |||||  ||||||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||     
T  49970124 atcttaatgataataatacatcacaacagcaaggcagtaccattaaataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaac 49970025  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  49970024 ttcatatcaacatctttcacaatatataaatattttcacatttaatcatcaaagtaaatcat 49969963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 31415404 - 31415543
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31415404 tcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcac 31415503  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatc 303  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  31415504 aatatataaatattttcacatttaatcatcaaagtaaatc 31415543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 193 - 318
Target Start/End: Original strand, 6808166 - 6808291
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||| || |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6808166 atatgaaggaagtcaccatcaataataatcattatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 6808265  T
Q  293 caaagtaaatcatcattattaatcat 318  Q
    ||||||||||||||| ||||||||||    
T  6808266 caaagtaaatcatcaatattaatcat 6808291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 198 - 357
Target Start/End: Complemental strand, 1989050 - 1988890
Alignment:
Q  198 cagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaag 297  Q
    ||||||||||||||||| ||||||||||| ||| ||| ||||||| |||||||||||  |||||||| |||||| || |||| |||||| |||||||| |    
T  1989050 cagcaagtcaacatcaacaataatcatcaaatacaaccattacaacttcatatcaacaactttcacattatatagatcttttcacatttaatcatcaacg 1988951  T
Q  298 taaatcatcattatt-aatcatcttattcaccctctctgaacctcattataatcattaaca 357  Q
    | ||||| || |||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  1988950 tgaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaaca 1988890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 277
Target Start/End: Complemental strand, 1465676 - 1465531
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||  |    
T  1465676 accaacattagatcttcatgatattaatacgccacaaccacaaggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcgtcaaatcca 1465577  T
Q  233 acaattacaatttcatatcaacgtctttcacaa-tatataaatatt 277  Q
    || ||||| | ||||||| | | |||||||||| ||||||||||||    
T  1465576 accattacgacttcatataagcatctttcacaattatataaatatt 1465531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 20630351 - 20630191
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||| ||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||||||     
T  20630351 atcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaac 20630252  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| |||||||||||||||||||||| | ||| || ||| ||||||||||||||    
T  20630251 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcgtcaaagtaaatcat 20630191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 30175410 - 30175304
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||| | ||||||| ||||||||||| ||||||||| ||||||    
T  30175410 gcaaggcaacaccattaaataatatgaagcaagtcaacatcaacaataatcatcccatatatccattacaacttcatatcaacatctttcacagtatata 30175311  T
Q  272 aatattt 278  Q
    |||||||    
T  30175310 aatattt 30175304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 274
Target Start/End: Original strand, 40811994 - 40812096
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||||||||    
T  40811994 gcaaagcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatcccatataaccattacaacttcatatcaacatctttcacaatatata 40812093  T
Q  272 aat 274  Q
    |||    
T  40812094 aat 40812096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 144 - 295
Target Start/End: Complemental strand, 49389924 - 49389772
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| |||||||||| |  ||||| | ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||     
T  49389924 atcttaatgatattaacacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatcaaatataacaattacaac 49389825  T
Q  244 ttcatatcaacgtctttcacaatata--taaatatttttacattttatcatcaa 295  Q
    |||||||||||  | |||||||||||  |||||||||| |||||| ||||||||    
T  49389824 ttcatatcaacaac-ttcacaatatatctaaatattttcacatttaatcatcaa 49389772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 13436104 - 13436222
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaa-gtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    |||| |||||||| ||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||| |||||||    
T  13436104 gtaagagtacaccacctcttataaaaacgaaaaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacaacggctacaactacg 13436203  T
Q  119 acatcaacaacaacaccaa 137  Q
    || |||||||| |||||||    
T  13436204 acttcaacaacgacaccaa 13436222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 16839961 - 16839848
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatca 124  Q
    |||||||| ||||||||||| | || |||||||||||| ||||||||||||||||||||||||||||| | ||||||| |  |||| ||||||||| |||    
T  16839961 agtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaacacctgacataaactatcaccaacaacagctacaactacgacttca 16839862  T
Q  125 acaacaacaccaac 138  Q
    ||||||||||||||    
T  16839861 acaacaacaccaac 16839848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 40807152 - 40807245
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  40807152 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 40807245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 295
Target Start/End: Original strand, 5841943 - 5842061
Alignment:
Q  178 caacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatt 277  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||| ||| | | ||||||||||||||||||| ||    
T  5841943 caacactattaaataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcttatgagcatctttcacaatatataaatctt 5842042  T
Q  278 t-ttacattttatcatcaa 295  Q
    |  ||||||| ||||||||    
T  5842043 tcgtacatttaatcatcaa 5842061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 18440101 - 18439941
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||  | ||||| ||||||||| ||||||| | ||||| |||| |||||| ||||||||||| ||| ||| |||||||     
T  18440101 atcttaatgatattaatacatcacctcagcaagacaacaccatcaaataatttacagcaggtcatcatcaacaataatcatcaaatacaaccattacaac 18440002  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||| | |||||||||||||||| ||||| | ||| || ||||||||||||||||||    
T  18440001 ttcatatcatcatctttcacaatatatagatattctcaca-ttaatcatcaaagtaaatcat 18439941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 22307479 - 22307386
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||  ||||||| ||||||||||| ||||||||||    
T  22307479 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataatcattacaacttcatatcaacatctttcacaa 22307386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 150 - 274
Target Start/End: Original strand, 12269443 - 12269567
Alignment:
Q  150 atgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcata 249  Q
    ||||||||||||   ||| || |||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||| ||||||  ||||||| ||||||    
T  12269443 atgatattaatagaccacgactgcaaggcaacactattaactaatatgcagcacgtcaacatcaacaataatcatcaaatataatcattacaacttcata 12269542  T
Q  250 tcaacgtctttcacaatatataaat 274  Q
    |||||||| |||| ||| |||||||    
T  12269543 tcaacgtccttcaaaatttataaat 12269567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 17538263 - 17538356
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||  | ||||| ||||||||||| ||||||||||    
T  17538263 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataatcaatacaacttcatatcaacatctttcacaa 17538356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41469 - 41545
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||| || |||||||||||| ||||||||||||||    
T  41469 cctcttataaagacaacgagtaagagtacaccacctcttataaagacgacaagtaagagtacaccacctcttataaa 41545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 14648012 - 14647893
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    ||||| |||||||| ||||||||||||| || | |||||||||| ||||||||||||||||| || |||| | ||| ||||||| | || || ||||||     
T  14648012 agtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactact 14647913  T
Q  119 acatcaacaacaacaccaac 138  Q
    || |||||||||||||||||    
T  14647912 acttcaacaacaacaccaac 14647893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 8928727 - 8928612
Alignment:
Q  20 gtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    |||| |||||||| ||||||||||| |  | ||||||||||||| |||||||||| | |||||||||||||| ||  ||||||| | ||||| |||||||    
T  8928727 gtaagagtacaccacctcttataaaaacaacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacg 8928628  T
Q  119 acatcaacaacaacac 134  Q
    || |||||||||||||    
T  8928627 acttcaacaacaacac 8928612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 41502 - 41640
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttat-aaaacacctgacataaacaaccacc 99  Q
    |||||||||||||  || ||||| |||||||| ||||||||||||| || | |||||||||| ||||||||||| |||||| || || | | ||| ||||    
T  41502 cctcttataaagacgacaagtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaaaacatctaacctgatcaatcacc 41601  T
Q  100 aacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||| | || || ||||||||| | |||||||||||||||    
T  41602 aacaacggatacaactacgactttaacaacaacaccaac 41640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 2249029 - 2248891
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccacc 99  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | |||||||||| |||||||||||| ||||| || || | | ||| ||||    
T  2249029 cctcttataaaaacgacaagtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttatagaaacatctaacctgatcaatcacc 2248930  T
Q  100 aacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||| | || || ||||||||| |||||||||||||||||    
T  2248929 aacaacggatacaactacgacttcaacaacaacaccaac 2248891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16325685 - 16325607
Alignment:
Q  1 cctcttataaa-gaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| || ||||||||| |||||||| ||||||||||||| || |||||||||||| |||||||||||||||    
T  16325685 cctcttataaaagacaacgagtaagagtacaccacctcttataaagacgacaagtaagagtacaccacctcttataaaa 16325607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 12852613 - 12852484
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattac-aa 242  Q
    ||||| ||||||||||||  ||||| | ||||||||||| ||| ||||||| | ||||||||||||||||| ||||||||||| ||| ||  ||||| ||    
T  12852613 atcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacagcaagtcaacatcaacaataatcatcaaatacaatcattacaaa 12852514  T
Q  243 tttcatatcaacgtctttcacaatatataa 272  Q
     ||||||||| | || | ||||||||||||    
T  12852513 cttcatatcatcatcatccacaatatataa 12852484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5841602 - 5841674
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctctta 73  Q
    ||||||| ||||| ||||||||| |||||||| ||||||||||||| || |||||||||||| ||||||||||    
T  5841602 cctcttagaaagacaacgagtaagagtacaccacctcttataaagacgacaagtaagagtacaccacctctta 5841674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 45797046 - 45797169
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||| ||||| | ||||||||||| ||| | ||||| |||| |||||||||||||| ||||||||||| ||| |   |||||||     
T  45797046 atcttaatgatattaatatatcacatcagcaaggcaacaacatcatataat-tgcaacaagtcaacatcaacaataatcatcaaatacattcattacaac 45797144  T
Q  244 ttcatatcaacgtctttcacaatat 268  Q
    ||||||||| | || ||||||||||    
T  45797145 ttcatatcatcatcattcacaatat 45797169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 355
Target Start/End: Original strand, 12269653 - 12269793
Alignment:
Q  214 ataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattatt- 312  Q
    |||||| || |||||| ||| || ||||| |||||||||||  |||||||||||||||||| ||||| || || ||||||||  | || || || ||||     
T  12269653 ataatattcttcatatgtaaaaaatacaacttcatatcaacaactttcacaatatataaatcttttt-ca-ttaatcatcaactttaaacaacaatatta 12269750  T
Q  313 aatcatcttattcaccctctctgaacctcattataatcattaa 355  Q
    |||||||||| ||| |||||||||||||||||| |||||||||    
T  12269751 aatcatcttagtcatcctctctgaacctcattacaatcattaa 12269793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 14501001 - 14501109
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||| |||||   ||||||||||| ||| | ||||| |||| |||||||||||||| ||||||||||| ||| |   |||||||     
T  14501001 atcttaatgatattaatatatcacattagcaaggcaacaacatcatataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaac 14501100  T
Q  244 ttcatatca 252  Q
    |||||||||    
T  14501101 ttcatatca 14501109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 16840064 - 16840005
Alignment:
Q  20 gtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||    
T  16840064 gtaatagtacaccacctcttataaagacgacaaagtaagagtacaccacctcttataaaa 16840005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 13520828 - 13520718
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaacgatggctaaaactacgacatc 123  Q
    |||||||| |||||||||||  |  || |||||||||| |||||||||| |||||||||| |||||||||  ||||||| |  |||  ||||||||| ||    
T  13520828 agtacaccacctcttataaaacaacaatgtaagagtacaccacctcttacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttc 13520729  T
Q  124 aacaacaacac 134  Q
    |||||||||||    
T  13520728 aacaacaacac 13520718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 11912759 - 11912808
Alignment:
Q  89 aaacaaccaccaacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    |||||| |||| |||||||||| |||||||||||||||||||||||||||    
T  11912759 aaacaatcacccacgatggctacaactacgacatcaacaacaacaccaac 11912808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16325718 - 16325641
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttat-aaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||||||||||| ||||||||| |||||||| |||||||| |||||  |  ||||||||||| ||||||||||||||    
T  16325718 cctcttataaagacaacgagtaagagtacaccacctcttataaaagacaacgagtaagagtacaccacctcttataaa 16325641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14648062 - 14647987
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||||||||| | ||| ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  14648062 cctcttataaaaacaacaagtaagagtacaccacctcttataaa-acgacaagtaagagtacaccacctcttataaa 14647987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 16325600 - 16325480
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccaccaacgatggctaaaactac 117  Q
    ||||| ||||| || |||||||||||||  | | |||||||||| |||||||||||| ||||| || || | | ||| ||||||| | || || ||||||    
T  16325600 agtaagagtactccacctcttataaagacaacacgtaagagtacaccacctcttatagaaacatctaacctgatcaatcaccaacaacggatacaactac 16325501  T
Q  118 gacatcaacaacaacaccaac 138  Q
    ||| |||||||||||||||||    
T  16325500 gacttcaacaacaacaccaac 16325480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16325651 - 16325575
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||||||||  || ||||| |||||||| |||||||||||   || |||||||||||| ||||||||||||||    
T  16325651 cctcttataaagacgacaagtaagagtacaccacctcttataaaagcgacaagtaagagtactccacctcttataaa 16325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 45220576 - 45220476
Alignment:
Q  2 ctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacct-gacataaacaaccacca 100  Q
    ||||||||||||  ||  |||| |||||||| ||||||||||| ||   | |||||||||| ||||||||||||||||||||  |||||||||| |||||    
T  45220576 ctcttataaagacgacacgtaagagtacaccacctcttataaaaaaacgacgtaagagtacaccacctcttataaaacacctaaacataaacaatcacca 45220477  T
Q  101 a 101  Q
    |    
T  45220476 a 45220476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 16840031 - 16839972
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  16840031 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaa 16839972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 2249044 - 2248986
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  2249044 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 2248986  T

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Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 5841385 - 5841443
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  5841385 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 5841443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 14648142 - 14648084
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  14648142 gtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaa 14648084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14648128 - 14648051
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || | |||||||||| |||||||||||||||    
T  14648128 cctcttataaaaacgacaagtaagagtacaccacctcttataaaaacgacacgtaagagtacaccacctcttataaaa 14648051  T

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Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41436 - 41512
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||||||||  | ||| ||||| |||||||| |||||||||||||  |  ||||||||||| ||||||||||||||    
T  41436 cctcttataacaacaacaagtaagagtacaccacctcttataaagacaacgagtaagagtacaccacctcttataaa 41512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 2249076 - 2249018
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  2249076 agtaagagtacaccacctcttataaa-acgacaagtaagagtacaccacctcttataaaa 2249018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 5841433 - 5841508
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataa 76  Q
    |||||||||||||  ||  |||| |||||||| ||||||||| | | || |||||||||||| |||||||||||||    
T  5841433 cctcttataaagacgacacgtaagagtacaccgcctcttatagacacgacaagtaagagtacaccacctcttataa 5841508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 14648076 - 14648017
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    |||| |||||||| ||||||||||| |  | |||||||||||| ||||||||||||||||    
T  14648076 gtaagagtacaccacctcttataaaaacaacaagtaagagtacaccacctcttataaaac 14648017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 14648176 - 14648117
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || | |||||||||| |||||||||||||||    
T  14648176 agtaagagtacaccacctcttataaaaacgacacgtaagagtacaccacctcttataaaa 14648117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 16325733 - 16325674
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| |||||||||||||  |  ||||||||||| |||||||||||||||    
T  16325733 agtaagagtacaccacctcttataaagacaacgagtaagagtacaccacctcttataaaa 16325674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5841400 - 5841474
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata 75  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | |||||||||| || |||||||||    
T  5841400 cctcttataaaaacgacaagtaagagtacaccacctcttataaagacgacacgtaagagtacaccgcctcttata 5841474  T

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Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 16325766 - 16325708
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||  | || |||||||||||| ||||||||||||||    
T  16325766 agtaagagtacaccacctcttataacaacgacaagtaagagtacaccacctcttataaa 16325708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 16325867 - 16325809
Alignment:
Q  19 agtaatagtacaccccctcttataaaga-agaaaagtaagagtacgccacctcttataa 76  Q
    ||||| |||||||| ||||||| ||||| || ||||||||||||| |||||||||||||    
T  16325867 agtaagagtacaccacctcttagaaagacagtaaagtaagagtacaccacctcttataa 16325809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 254
Target Start/End: Complemental strand, 18439935 - 18439845
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaac 254  Q
    ||||||| ||||| ||||| |||| ||  |||| || ||||| | |||||||||||||| |||||||||||| || ||| | |||||||||    
T  18439935 tcacaacagcaagacaacatcatttaaacatatacaacaagtaaccatcaataataatcttcatatataacatttgcaactacatatcaac 18439845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 45220591 - 45220533
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||| ||||||||  |||||||||||| || | |||||||||| |||||||||||||||    
T  45220591 gtaagagtacaccatctcttataaagacgacacgtaagagtacaccacctcttataaaa 45220533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 45220788 - 45220730
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||| |||||||| ||||||||||||| || |  ||||||||| |||||||||||||||    
T  45220788 gtaagagtacaccacctcttataaagacgacacctaagagtacaccacctcttataaaa 45220730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 45220822 - 45220764
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||||||||| |||||||||||  |  || |||||||||| ||||||||||||||    
T  45220822 agtaatagtacaccacctcttataaaataacaacgtaagagtacaccacctcttataaa 45220764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 2249110 - 2249049
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaac 79  Q
    ||||| |||||||| ||||||| ||| | || ||||||||||||| ||||||||||||||||    
T  2249110 agtaagagtacaccacctcttagaaaaacgataaagtaagagtacaccacctcttataaaac 2249049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 12852419 - 12852390
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  12852419 aataataatcatcatatataacaattacaa 12852390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 17692076 - 17691999
Alignment:
Q  53 gtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaacgatggctaaaactacgacatcaacaac 129  Q
    |||||||||| |||||||| | |||||||||| |||||||||| ||||||| |  |||  ||||||||| ||||||||    
T  17692076 gtaagagtacaccacctctcacaaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 17691999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 52466574 - 52466525
Alignment:
Q  53 gtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaa 101  Q
    |||||||||| |||||||||| |||||||||| |||||||||| ||||||    
T  52466574 gtaagagtacaccacctcttacaaaacacctgaacataaacaatcaccaa 52466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 12158633 - 12158665
Alignment:
Q  329 ctctctgaacctcattataatcattaacaactt 361  Q
    |||||| ||||||||||||||||||||||||||    
T  12158633 ctctctcaacctcattataatcattaacaactt 12158665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 193; Significance: 1e-105; HSPs: 4)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 133 - 361
Target Start/End: Original strand, 166 - 394
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  166 accaacattagatcttcatgaaattaatatgtcacaaccgcaaggcaacaccattaaataatatgcatcaagtcaacatcaataataataatcatatata 265  T
Q  233 acaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctct 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||||    
T  266 acaattacaatttcatatcaacgtctttcacaatatataaatattttcacatataatcatcaaagtaaatcatcattattaatcatcttattcatcctct 365  T
Q  333 ctgaacctcattataatcattaacaactt 361  Q
    |||||||| ||||||||||||||||||||    
T  366 ctgaacctaattataatcattaacaactt 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 133 - 340
Target Start/End: Original strand, 4584 - 4791
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  4584 accaacattagatcttcatgaaattaatatgtcacaaccgcaaggcaacaccattaaataatatgcatcaagtcaacatcaataataataatcatatata 4683  T
Q  233 acaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctct 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  4684 acaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattattaatcatcttattcatcctct 4783  T
Q  333 ctgaacct 340  Q
    ||||||||    
T  4784 ctgaacct 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 35 - 84
Alignment:
Q  89 aaacaaccaccaacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    |||||| |||| |||||||||| |||||||||||||||||||||||||||    
T  35 aaacaatcacccacgatggctacaactacgacatcaacaacaacaccaac 84  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 4453 - 4502
Alignment:
Q  89 aaacaaccaccaacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    |||||| |||| |||||||||| |||||||||||||||||||||||||||    
T  4453 aaacaatcacccacgatggctacaactacgacatcaacaacaacaccaac 4502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 134 - 361
Target Start/End: Complemental strand, 34297151 - 34296924
Alignment:
Q  134 ccaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataa 233  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34297151 ccaacattagatcttcatgatattaatacgtcacaaccgcaaggaaacaccattaaataatatgcagcaagtcaacattaataataatcatcatatataa 34297052  T
Q  234 caattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctc 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||||     
T  34297051 caattacaatttcatatcaacgtctttcacaatatataaatattttcacatctaatcatcaaagtaaatcatcattattaatcatcttattcatcctctt 34296952  T
Q  334 tgaacctcattataatcattaacaactt 361  Q
    ||||||||||||||||||||||||||||    
T  34296951 tgaacctcattataatcattaacaactt 34296924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 164 - 359
Target Start/End: Complemental strand, 20734299 - 20734104
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| |||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20734299 tcacaacagcaagacaacaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 20734200  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaac 359  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||||||||||||||    
T  20734199 aatatataaatattttcacatttaatcatcaaagtaaatcatcaatataaatcattttattcatcctctctgaacctcattataatcattaacaac 20734104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 209 - 359
Target Start/End: Original strand, 27851246 - 27851397
Alignment:
Q  209 catcaataataatcatcatatataacaa-ttacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatca 307  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  27851246 catcaataataatcttcatatataacaaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaggtaaatcatca 27851345  T
Q  308 ttattaatcatcttattcaccctctctgaacctcattataatcattaacaac 359  Q
     ||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  27851346 atataaatcatcttattcatcctctctgaacctcattataatcattaacaac 27851397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 193 - 322
Target Start/End: Original strand, 2201148 - 2201277
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||    
T  2201148 atatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcatatttaatcat 2201247  T
Q  293 caaagtaaatcatcattattaatcatctta 322  Q
    ||||||||||||||| ||||||||||||||    
T  2201248 caaagtaaatcatcaatattaatcatctta 2201277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 193 - 320
Target Start/End: Original strand, 22420996 - 22421123
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  22420996 atatgcaacaagtcactatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 22421095  T
Q  293 caaagtaaatcatcattattaatcatct 320  Q
    ||||||||||||||| ||||||||||||    
T  22421096 caaagtaaatcatcaatattaatcatct 22421123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 144 - 301
Target Start/End: Original strand, 19399738 - 19399895
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| |||||| |||||  ||||||  ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||     
T  19399738 atcttaatgataataatacatcacaaaagcaaggcagaaccattaaataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaac 19399837  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaa 301  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||    
T  19399838 ttcatatcaacatctttcacaatatataaatattttcacatttaatcatcaaagtaaa 19399895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 164 - 353
Target Start/End: Complemental strand, 25956709 - 25956519
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  |||| |||||||| | |||||||||||||| |||||||||||| || ||| | |||||||||  |||||||    
T  25956709 tcacaacagcaagacaacatcatttaaacatatacagcaagtaaccatcaataataatcttcatatataacatttgcaactccatatcaacaactttcac 25956610  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattatt-aatcatcttattcaccctctctgaacctcattataatcatt 353  Q
    | |||||| || |||| |||||| |||||||| |||||||| || |||| |||||||||| ||| ||||||||||||||||||||||||||    
T  25956609 attatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcatt 25956519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 34297353 - 34297234
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaa-aagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactac 117  Q
    ||||| |||||||| ||||||||||| | ||  |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  34297353 agtaagagtacaccacctcttataaa-acgaccaagtaagagtacaccacctcttataaaacacctgacataaacaatcaccaacgatggctacaactac 34297255  T
Q  118 gacatcaacaacaacaccaac 138  Q
    |||||||||||||||||||||    
T  34297254 gacatcaacaacaacaccaac 34297234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 18927832 - 18927954
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||||||||    
T  18927832 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatata 18927931  T
Q  272 aatatttttacattttatcatcaa 295  Q
    |||  ||| |||||| ||||||||    
T  18927932 aat-ctttcacatttaatcatcaa 18927954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 25956875 - 25956715
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||| ||| ||||||| | |||||||||| |||||| ||||||||||| ||| ||| |||||||     
T  25956875 atcttaatgatattaatacatcacatcagcaaggcaacatcatcaaataatttacagcaagtcatcatcaacaataatcatcaaatacaaccattacaac 25956776  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||| | |||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  25956775 ttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcat 25956715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 27851035 - 27851195
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | | ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||| ||| ||| | |||||     
T  27851035 atcttaatgatattaatacatcacatcagtaaggcaacaccatcaaataatttgcagcaagtcaacatcgacaataatcatcaaatacaaccaatacaac 27851134  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||| | |||||||||||||||||||||| | ||| || | ||||||||||||||||    
T  27851135 ttcatatcagcatctttcacaatatataaatattctcaca-ttaagcatcaaagtaaatcat 27851195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 31630781 - 31630622
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| |  |||| ||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||| ||     
T  31630781 atcttaatgatattaatacatcacatcaacaagacaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattataac 31630682  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatca 304  Q
    ||||||||||| |||||||||||||||||||||| | ||| || |||||||||||||||||    
T  31630681 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 31630622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 18708656 - 18708749
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  18708656 gcaaggcatcaccattaaataatatgcagcaagtcaacataaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 18708749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 23151162 - 23151069
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  23151162 gcaaggcagcaccattaaataatatgcagcaagtcaacattaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 23151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 27322303 - 27322221
Alignment:
Q  183 ccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  27322303 ccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 27322221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 295
Target Start/End: Original strand, 28708636 - 28708754
Alignment:
Q  178 caacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatt 277  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||| ||| | | ||||||||||||||||||| ||    
T  28708636 caacactattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctt 28708735  T
Q  278 t-ttacattttatcatcaa 295  Q
    |  ||||||| ||||||||    
T  28708736 tcgtacatttaatcatcaa 28708754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23955738 - 23955815
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||| || |||||||||||| |||||||||||||||    
T  23955738 cctcttataaagacaacgagtaagagtacaccacctcttataaagacgacaagtaagagtacaccacctcttataaaa 23955815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 25738208 - 25738318
Alignment:
Q  25 agtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatc 123  Q
    |||||||| ||||||||||| | || ||||||||||||| ||||||| || ||||||||||||| |||||| ||||||| | ||||| ||||||||| ||    
T  25738208 agtacaccacctcttataaaaacgacaaagtaagagtacaccacctcctacaaaacacctgacagaaacaatcaccaacaacggctacaactacgacctc 25738307  T
Q  124 aacaacaacac 134  Q
    ||| |||||||    
T  25738308 aacgacaacac 25738318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 7429648 - 7429785
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccacca 100  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || | |||||||||| ||||||||||||||||| || |||| | ||| |||||    
T  7429648 cctcttataaaaacgacaagtaagagtacaccacctcttataaaaacgacacgtaagagtacaccacctcttataaaacatctaacatgatcaatcacca 7429747  T
Q  101 acgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    || | || || |||||| || |||||||||||||||||    
T  7429748 acaacggatacaactactacttcaacaacaacaccaac 7429785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 14594533 - 14594415
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||||| ||||||||||||| || | ||||||||||  |||||||||||||||| || |||| | ||| ||||||| | || || |||||| |    
T  14594533 gtaagagtacaccacctcttataaagacgacacgtaagagtacatcacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactacta 14594434  T
Q  120 catcaacaacaacaccaac 138  Q
    | |||||||||||||||||    
T  14594433 cttcaacaacaacaccaac 14594415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 29417196 - 29417087
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatca 124  Q
    |||||||| ||||||||||   |  ||||||||||||| |||||||||| | |||||||||||||| ||  ||||||| | ||||| ||||||||| |||    
T  29417196 agtacaccacctcttataacacaacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacgacttca 29417097  T
Q  125 acaacaacac 134  Q
    ||||||||||    
T  29417096 acaacaacac 29417087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28708295 - 28708367
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctctta 73  Q
    ||||||| ||||| ||||||||| |||||||  ||||||||||||| || |||||||||||| ||||||||||    
T  28708295 cctcttagaaagacaacgagtaagagtacactacctcttataaagacgacaagtaagagtacaccacctctta 28708367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 9622706 - 9622588
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||||| ||||||||||| |  | |||||||||||| ||||||||||||||||| || |||| | ||| ||||||| | || || ||||||||    
T  9622706 gtaagagtacaccacctcttataaaaacaacaagtaagagtacaccacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactacga 9622607  T
Q  120 catcaacaacaacaccaac 138  Q
      ||||| |||| ||||||    
T  9622606 attcaaccacaaaaccaac 9622588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 23955837 - 23955975
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccacc 99  Q
    |||||||||||||  ||  |||| |||||||| ||||||||||||| || | |||||||||| |||||||||||| ||||| || |||| | ||| || |    
T  23955837 cctcttataaagacgacacgtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttatagaaacatctaacatgatcaatcatc 23955936  T
Q  100 aacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||| |  | || |||||| || |||||||||||||||||    
T  23955937 aacaacagatacaactacaacttcaacaacaacaccaac 23955975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23955771 - 23955847
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||||||||  || ||||| |||||||| |||||||||||   || |||||||||||| ||||||||||||||    
T  23955771 cctcttataaagacgacaagtaagagtacaccacctcttataaaagcgacaagtaagagtacaccacctcttataaa 23955847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 7429634 - 7429692
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  7429634 gtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaa 7429692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 23955822 - 23955880
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||||| || | |||||||||| ||||||||||||||    
T  23955822 agtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaa 23955880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 28708078 - 28708136
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  28708078 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 28708136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 7429600 - 7429659
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || | |||||||||| |||||||||||||||    
T  7429600 agtaagagtacaccacctcttataaaaacgacacgtaagagtacaccacctcttataaaa 7429659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28708126 - 28708201
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataa 76  Q
    |||||||||||||  ||  |||| |||||||| ||||||||| | | || |||||||||||| |||||||||||||    
T  28708126 cctcttataaagacgacacgtaagagtacaccgcctcttatagacacgacaagtaagagtacaccacctcttataa 28708201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 9622739 - 9622681
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||| |||||||| ||||||||||| | || | |||||||||| |||||||||||||||    
T  9622739 gtaaaagtacaccacctcttataaaaacgacacgtaagagtacaccacctcttataaaa 9622681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 14594567 - 14594509
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || | |||||||||| ||||||||||||||    
T  14594567 agtaagagtacaccacctcttataaaaacgacacgtaagagtacaccacctcttataaa 14594509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 23955723 - 23955781
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| |||||||||||||  |  ||||||||||| ||||||||||||||    
T  23955723 agtaagagtacaccacctcttataaagacaacgagtaagagtacaccacctcttataaa 23955781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28708093 - 28708167
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata 75  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | |||||||||| || |||||||||    
T  28708093 cctcttataaaaacgacaagtaagagtacaccacctcttataaagacgacacgtaagagtacaccgcctcttata 28708167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 172 - 361
Target Start/End: Complemental strand, 6522 - 6333
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    ||||| |||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6522 gcaagacaacaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 6423  T
Q  272 aatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6422 aatattttcacatttaatcatcaaagtaaatcattattattaatcatcttattcatcctctctgaacctcattataatcattaacaactt 6333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 3e-70; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 195 - 361
Target Start/End: Original strand, 33186133 - 33186299
Alignment:
Q  195 atgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatca 294  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||    
T  33186133 atgcagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcataatatataaatattttcacatttaatcatca 33186232  T
Q  295 aagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33186233 aagtaaatcattaatattaatcatcttattcatcctctctgaacctcattataatcattaacaactt 33186299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 193 - 322
Target Start/End: Original strand, 15880726 - 15880855
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||    
T  15880726 atatgtagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaataat 15880825  T
Q  293 caaagtaaatcatcattattaatcatctta 322  Q
    ||||||||||||||| |||| |||||||||    
T  15880826 caaagtaaatcatcaatattgatcatctta 15880855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 35812341 - 35812145
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||    
T  35812341 tcacaacagcaagacaacatcattagataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcac 35812242  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    |||||||||||  ||  |||||| ||||||||  ||||||  ||  ||||||||||||||| |  |||||||||| |||||||||||||||| |||||    
T  35812241 aatatataaat-cttccacatttaatcatcaacttaaatccacaacattaatcatcttatttatactctctgaacttcattataatcattaaaaactt 35812145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 133 - 277
Target Start/End: Original strand, 15099204 - 15099349
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||| |    
T  15099204 accaacattagatcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaatagtatgcagcaagtcaacatcaacaataatcgtcaaataca 15099303  T
Q  233 acaattacaatttcatatcaacgtctttcacaa-tatataaatatt 277  Q
    || ||||| | ||||||| | | |||||||||| ||||||||||||    
T  15099304 accattacgacttcatataagcatctttcacaattatataaatatt 15099349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 144 - 304
Target Start/End: Original strand, 362113 - 362272
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||| ||     
T  362113 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattataac 362212  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatca 304  Q
    |||||||||||||||||||||||||||||||||| | ||| || |||||||||||||||||    
T  362213 ttcatatcaacgtctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 362272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 9923305 - 9923427
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||||||||    
T  9923305 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatata 9923404  T
Q  272 aatatttttacattttatcatcaa 295  Q
    |||  ||| |||||| ||||||||    
T  9923405 aat-ctttcacatttaatcatcaa 9923427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 46642707 - 46642861
Alignment:
Q  150 atgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcata 249  Q
    ||||||||||||   ||| || |||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  46642707 atgatattaatacaccacgacggcaaggcaacactattaactaatatgcagcacgtcaacatcaacaataatcatcaaatataaccattacaacttcata 46642806  T
Q  250 tcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||||||| | ||||||| || | ||| || ||||||||| ||||||||    
T  46642807 tcaacgtctttcacagtttataaatcttctcaca-ttaatcatcaaattaaatcat 46642861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 11479554 - 11479432
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    |||||||| | ||||||| |||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||||||||    
T  11479554 gcaaggcagcgccattaagtaatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatata 11479455  T
Q  272 aatatttttacattttatcatcaa 295  Q
    |||  ||| |||||| ||||||||    
T  11479454 aat-ctttcacatttaatcatcaa 11479432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 349
Target Start/End: Original strand, 13844572 - 13844758
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| | ||| ||||| |||| ||  |||| || ||||| | |||||||||||||| |||||||||||| || ||| | |||||||||  |||||||    
T  13844572 tcacaacagtaagacaacatcatttaaacatatacaacaagtaaccatcaataataatcttcatatataacatttgcaactccatatcaacaactttcac 13844671  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattatt-aatcatcttattcaccctctctgaacctcattataat 349  Q
    | |||||| ||||||| |||||| |||||||| ||||||||  | |||| |||||||||| ||| ||||||||||||||||||||||    
T  13844672 attatatagatattttcacatttaatcatcaacgtaaatcaataatattaaatcatcttaatcatcctctctgaacctcattataat 13844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 15868953 - 15868794
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||| ||||||  |||||||     
T  15868953 atcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttgcagcaagtcaacatcaacaataatcatcagatataatcattacaac 15868854  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||| | || |||||||||||||| |||| |  ||||  ||||||||||||||||||    
T  15868853 ttcatatcatcatcattcacaatatataa-tattctctcatta-atcatcaaagtaaatcat 15868794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 186 - 305
Target Start/End: Complemental strand, 52873369 - 52873251
Alignment:
Q  186 ttaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacatt 285  Q
    ||||||||| | ||||||||||||||||| ||||||||||  ||| ||| ||||||| ||||||||||| |||||||||||||||||||||| | ||| |    
T  52873369 ttaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-t 52873271  T
Q  286 ttatcatcaaagtaaatcat 305  Q
    | ||||||||||||||||||    
T  52873270 taatcatcaaagtaaatcat 52873251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 13844406 - 13844566
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| |  |||||||||||||| ||||||| |  ||||||||| |||||| |||||| |||| ||| ||| |||||||     
T  13844406 atcttaatgatattaatacatcacatcaacaaggcaacaccatcaaataatttatagcaagtcatcatcaacaataataatcaaatacaaccattacaac 13844505  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||| | |||||||||||||||||||||| | ||| || || |||||||||||||||    
T  13844506 ttcatatcagcatctttcacaatatataaatattctcaca-ttaataatcaaagtaaatcat 13844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 631018 - 630890
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | |||||||||||  || ||||||| ||||||||||||||||||||||||||||||| ||| ||  |||||||     
T  631018 atcttaatgatattaatacatcacatcagcaaggcaacaaaatcaaataatttgcagcaagtcaacatcaataataatcatcaaatacaatcattacaac 630919  T
Q  244 ttcatatcaacgtctttcacaatatataa 272  Q
    ||||||||| | || ||||||||||||||    
T  630918 ttcatatcatcatcattcacaatatataa 630890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 19609480 - 19609573
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  19609480 gcaaggcagcaccattaaataatatgtaacaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 19609573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 355
Target Start/End: Original strand, 46642867 - 46643058
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| |||||||| || |||| ||  |||| || ||||| | || |||||||| || |||||| |||||||||||| ||||||| |||  |||||||    
T  46642867 tcacaacagcaaggcagcatcatttaaacatatacaacaagtaaccaccaataatattcttcatatgtaacaattacaacttcatattaacaactttcac 46642966  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattatt-aatcatcttattcaccctctctgaacctcattataatcattaa 355  Q
    ||||||||||| ||||  || || ||||||||  | || || || |||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  46642967 aatatataaatcttttcgca-ttaatcatcaactttaaacaacaatattaaatcatcttagtcatcctctctgaacctcattataatcattaa 46643058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 143 - 361
Target Start/End: Complemental strand, 21189896 - 21189678
Alignment:
Q  143 gatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaa 242  Q
    |||||| |||| |||||||  | |||||  ||||||||||  | | ||||||| ||||||||||| || ||||||||||||||||||| ||||| || ||    
T  21189896 gatcttaatgacattaatactttacaacaacaaggcaacattagttaataataagcagcaagtcaccaacaataataatcatcatatacaacaagtataa 21189797  T
Q  243 tttcatatcaacgtctttcacaatatataaatatttttacatttta-tcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctc 341  Q
      | |||||||| ||||||| || ||||||||||||  || ||| | || ||||  ||||||| ||| |||| ||||| ||||||  |||||||||||||    
T  21189796 -ctgatatcaacatctttcataacatataaatatttccacttttaattcgtcaacttaaatcaacatcattagtcatcatattcattctctctgaacctc 21189698  T
Q  342 attataatcattaacaactt 361  Q
      |||||||||||| |||||    
T  21189697 tgtataatcattaataactt 21189678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28385119 - 28385196
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||| || |||||||||||| || ||||||||||||    
T  28385119 cctcttataaagacaacgagtaagagtacaccacctcttataaagacgacaagtaagagtacaccgcctcttataaaa 28385196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 32851253 - 32851377
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||| ||||| | ||||||||||| ||| | ||||| |||| |||||||||||||| ||||||||||| ||| |   |||||||     
T  32851253 atcttaatgatattaatatatcacatcagcaaggcaacaacatcatataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaac 32851352  T
Q  244 ttcatatcaacgtctttcacaatat 268  Q
    ||||||||| | || ||||||||||    
T  32851353 ttcatatcatcatcattcacaatat 32851377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 4831832 - 4831718
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||||| ||||||||||   |  ||||||||||||| |||||||||| | |||||||||||||| ||  ||||||| | ||||| ||||||||    
T  4831832 gtaagagtacaccacctcttataacacaacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacga 4831733  T
Q  120 catcaacaacaacac 134  Q
    | |||||||||||||    
T  4831732 cttcaacaacaacac 4831718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 4835127 - 4835013
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||||| ||||||||||   |  ||||||||||||| |||||||||| | |||||||||||||| ||  ||||||| | ||||| ||||||||    
T  4835127 gtaagagtacaccacctcttataacacaacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacga 4835028  T
Q  120 catcaacaacaacac 134  Q
    | |||||||||||||    
T  4835027 cttcaacaacaacac 4835013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 350
Target Start/End: Original strand, 14185252 - 14185346
Alignment:
Q  256 tctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatc 350  Q
    |||||||||||||||||||||||| |||||| | ||||||  |||| || ||   ||||||||||||||||  ||||||||||||||||||||||    
T  14185252 tctttcacaatatataaatattttcacatttaaccatcaacttaaaacaacaacgttaatcatcttattcatactctctgaacctcattataatc 14185346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 28385218 - 28385356
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccacc 99  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | |||||||||| |||||||||||| ||||| || || | | ||| ||||    
T  28385218 cctcttataaaaacgacaagtaagagtacaccacctcttataaagatgacacgtaagagtacaccacctcttatagaaacatctaacctgatcaatcacc 28385317  T
Q  100 aacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||| | || || ||||||||| |||||||||||||||||    
T  28385318 aacaacggatacaactacgacttcaacaacaacaccaac 28385356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 28385203 - 28385261
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||||||||||||||| | || |||||||||||| ||||||||||||||    
T  28385203 agtaagagtacaccccctcttataaaaacgacaagtaagagtacaccacctcttataaa 28385261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 132
Target Start/End: Original strand, 30146255 - 30146337
Alignment:
Q  50 aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatcaacaacaac 132  Q
    ||||||||||||| | |||||||| | ||||| |||||||| ||  ||||||| | ||||| ||||||||| |||||||||||    
T  30146255 aaagtaagagtacactacctcttacacaacacttgacataatcattcaccaacaacggctacaactacgacttcaacaacaac 30146337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28385152 - 28385229
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||||||||||||  || ||||| |||||||| |||||||||||   || |||||||||||| || ||||||||||||    
T  28385152 cctcttataaagacgacaagtaagagtacaccgcctcttataaaagcgacaagtaagagtacaccccctcttataaaa 28385229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 630825 - 630796
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  630825 aataataatcatcatatataacaattacaa 630796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 13812860 - 13812831
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  13812860 aataataatcatcatatataacaattacaa 13812831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 15190367 - 15190428
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaac 254  Q
    |||| |||||||| | ||||| |||||||| |||| |||||||||| ||| |||||||||||    
T  15190367 atatacagcaagtaaccatcattaataatcttcatgtataacaatttcaacttcatatcaac 15190428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 15868760 - 15868731
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  15868760 aataataatcatcatatataacaattacaa 15868731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 37838953 - 37838876
Alignment:
Q  53 gtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaacgatggctaaaactacgacatcaacaac 129  Q
    |||||||||| | |||||||| |||||||||| |||||||||| ||||||| |  |||  ||||||||| ||||||||    
T  37838953 gtaagagtacactacctcttagaaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 37838876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 37839051 - 37838991
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaaca 80  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||| ||||    
T  37839051 agtaagagtacaccacctcttataaa-acgacaagtaagagtacaccacctcttatagaaca 37838991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 37839085 - 37839024
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaac 79  Q
    ||||| |||||||| ||||||| ||| | || ||||||||||||| ||||||||||||||||    
T  37839085 agtaagagtacaccacctcttagaaaaacgataaagtaagagtacaccacctcttataaaac 37839024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 42597682 - 42597605
Alignment:
Q  53 gtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaacgatggctaaaactacgacatcaacaac 129  Q
    |||||||||| | |||||||| |||||||||| |||||||||| ||||||| |  |||  ||||||||| ||||||||    
T  42597682 gtaagagtacactacctcttagaaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 42597605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 42597780 - 42597720
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaaca 80  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||| ||||    
T  42597780 agtaagagtacaccacctcttataaa-acgacaagtaagagtacaccacctcttatagaaca 42597720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 42597814 - 42597753
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaac 79  Q
    ||||| |||||||| ||||||| ||| | || ||||||||||||| ||||||||||||||||    
T  42597814 agtaagagtacaccacctcttagaaaaacgataaagtaagagtacaccacctcttataaaac 42597753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 28385110 - 28385162
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||| |||||||||||||  |  ||||||||||| ||||||||||||||    
T  28385110 agtacaccacctcttataaagacaacgagtaagagtacaccacctcttataaa 28385162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 131; Significance: 7e-68; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 164 - 358
Target Start/End: Original strand, 14340 - 14534
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  ||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  14340 tcacaacagcaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaattacaacttcatatcaacgtctttcac 14439  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaa 358  Q
    | ||||| |||||||| |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14440 attatatgaatattttcacatttaatcatcaaagtaaatcatcaatattaatcatcttattcatcctctctgaacctcattataatcattaacaa 14534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 198 - 361
Target Start/End: Complemental strand, 12328673 - 12328510
Alignment:
Q  198 cagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaag 297  Q
    |||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  12328673 cagcaagtcaccatcaataataatcatcatatataacaattacatcttcatatcaacgtctttcacaatatataaatattttcaaatttaatcatcaaag 12328574  T
Q  298 taaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    |||||||||| |||||||||||||||||| |||||| | |||||||||||||| ||||||||||    
T  12328573 taaatcatcaatattaatcatcttattcatcctctcagcacctcattataatctttaacaactt 12328510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 193 - 314
Target Start/End: Complemental strand, 51274411 - 51274290
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  51274411 atatgcatcaagtcaccatcaataataatcatcttatataacaattacaacttcatatcaacatctttcacaatatataaatattttcacatttaatcat 51274312  T
Q  293 caaagtaaatcatcattattaa 314  Q
    ||||||||||||||| ||||||    
T  51274311 caaagtaaatcatcaatattaa 51274290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 214 - 322
Target Start/End: Original strand, 8885447 - 8885555
Alignment:
Q  214 ataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattatta 313  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  8885447 ataacaatcatcatatattacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatta 8885546  T
Q  314 atcatctta 322  Q
    |||||||||    
T  8885547 atcatctta 8885555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 133 - 277
Target Start/End: Complemental strand, 35981953 - 35981808
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| ||| |    
T  35981953 accaacattagatcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataatatgcaacaagtcaacatcaacaataatcgtcaaataca 35981854  T
Q  233 acaattacaatttcatatcaacgtctttcacaa-tatataaatatt 277  Q
    || ||||| | ||||||| | | |||||||||| ||||||||||||    
T  35981853 accattacgacttcatataagcatctttcacaattatataaatatt 35981808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 133 - 266
Target Start/End: Original strand, 20636704 - 20636837
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| |||||||||||||||||||  |||||||  || ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| |    
T  20636704 accaacattagatcttcatgatattaatacatcacaacaacagggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcgtcaaataca 20636803  T
Q  233 acaattacaatttcatatcaacgtctttcacaat 266  Q
    || ||||| | ||||||| ||| |||||||||||    
T  20636804 accattacgacttcatataaacatctttcacaat 20636837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 43542977 - 43543137
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  | ||| | ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||  |||||||     
T  43542977 atcttaatgatattaatacatgacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaatcattacaac 43543076  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| |||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  43543077 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcat 43543137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 361
Target Start/End: Original strand, 51326892 - 51327027
Alignment:
Q  213 aataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattatt 312  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||| || ||||||             |||||||| ||||    
T  51326892 aataataatcaacatatataacaattacaacttcatatcaacgtctttcataatatataaatatgttcacattt-------------aatcatcaatatt 51326978  T
Q  313 aatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  51326979 aatcatcttattcatcctctttgaacctcattataatcattaacaactt 51327027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 28194703 - 28194543
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||  | ||||||||||||||| ||||||| | ||||| || | |||||| ||||||||||| ||| ||| |||||||     
T  28194703 atcttaatgatattaatacatcacctcagcaaggcaacaccatcaaataatttacagcaggttatcatcaacaataatcatcaaatacaaccattacaac 28194604  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| |||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  28194603 ttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcat 28194543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 164 - 355
Target Start/End: Complemental strand, 28194537 - 28194345
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  |||| |||||||| | |||||||||||||| |||||||||||| || ||| | |||||||||  |||||||    
T  28194537 tcacaacagcaagacaacatcatttaaacatatacagcaagtaaccatcaataataatcttcatatataacatttgcaactacatatcaacaactttcac 28194438  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattatt-aatcatcttattcaccctctctgaacctcattataatcattaa 355  Q
    | |||||| || |||| |||||| |||||||| |||||||| || |||| ||||||| || ||| | |||||||||||||||| |||||||||    
T  28194437 attatatagattttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcctaatcatcttctctgaacctcattagaatcattaa 28194345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 274
Target Start/End: Original strand, 48301020 - 48301121
Alignment:
Q  173 caaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 272  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||| |||  || |||| ||||||| ||||||||||| |||||||||||||||||    
T  48301020 caagacaacaccattaaataatatgcagcaagtcaacatcaacaataataatctcatgtaaccattacaacttcatatcaacatctttcacaatatataa 48301119  T
Q  273 at 274  Q
    ||    
T  48301120 at 48301121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 43697240 - 43697400
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| |  ||||| |||||||| ||||||| | |||||||||| |||||| ||||||||||| ||| ||| |||||||     
T  43697240 atcttaatgatattaatacatcacatcaacaaggtaacaccatcaaataatttacagcaagtcatcatcaacaataatcatcaaataaaaccattacaac 43697339  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||| | ||||||||||||||| |||| | | ||| || ||||||||||||||||||    
T  43697340 ttcatatcagcatctttcacaatatatcaataatctcaca-ttaatcatcaaagtaaatcat 43697400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 353
Target Start/End: Original strand, 43697435 - 43697596
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    |||| |||||||| | || ||||||||||| |||||||||||| || ||| | |||||||||  |||||||| |||||| || |||| |||||| |||||    
T  43697435 atatacagcaagtaaccaacaataataatcttcatatataacatttgcaactccatatcaacaactttcacactatatagatcttttcacatttaatcat 43697534  T
Q  293 caaagtaaatcatcattatt-aatcatcttattcaccctctctgaacctcattataatcatt 353  Q
    |||  ||||||| || |||| |||||||||| ||| |||||||||||||||||| |||||||    
T  43697535 caacttaaatcaacaatattaaatcatcttaatcatcctctctgaacctcattaaaatcatt 43697596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 46382809 - 46382652
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  | ||| | ||| ||||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| |||||||     
T  46382809 atcttaatgatattaatacattacatcagcatggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaataaaaccattacaac 46382710  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatca 304  Q
    ||||||||||| ||||||||||  |||||||||| | ||| || |||||||||||||||||    
T  46382709 ttcatatcaacatctttcacaa--tataaatattctcaca-ttaatcatcaaagtaaatca 46382652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 636417 - 636340
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||| || |||||||||||| |||||||||||||||    
T  636417 cctcttataaagacaacgagtaagagtacaccacctcttataaagacgacaagtaagagtacaccacctcttataaaa 636340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 20031950 - 20031831
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    ||||| |||||||| ||||||||||| | || | |||||||||| ||||||||||||||||| || |||| | ||| ||||||| | || || |||||||    
T  20031950 agtaagagtacaccacctcttataaaaacgacacgtaagagtacaccacctcttataaaacatctaacatgatcaatcaccaacaacggatacaactacg 20031851  T
Q  119 acatcaacaacaacaccaac 138  Q
    || |||||||||||||||||    
T  20031850 acttcaacaacaacaccaac 20031831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 41227600 - 41227507
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| ||| |||||||| |||||||||||||||||| || ||||||||||  ||||||| |||| || ||||||| ||| ||||||||||    
T  41227600 gcaaggcagcacaattaaatattatgcagcaagtcaacattaacaataatcatccaatataaccattaaaacttcatataaacatctttcacaa 41227507  T

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Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 29534402 - 29534486
Alignment:
Q  50 aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatcaacaacaacac 134  Q
    ||||||||||||| | |||||||| | |||||||||||||| ||  ||||||| ||||||| ||||||||| |||||||||||||    
T  29534402 aaagtaagagtacactacctcttacacaacacctgacataatcattcaccaacaatggctacaactacgacttcaacaacaacac 29534486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 11945378 - 11945464
Alignment:
Q  53 gtaagagtacgccacctcttataaaacacctga-cataaacaaccaccaacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||||||||||  |||||||||||||||| |||| ||||||||| ||||||| |  |||| ||||||||| |||||||||||||||||    
T  11945378 gtaagagtacatcacctcttataaaacatctgaacataaacaatcaccaacaacagctacaactacgacttcaacaacaacaccaac 11945464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20032000 - 20031924
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| | ||| ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  20032000 cctcttataaaaacaacaagtaagagtacaccacctcttataaa-acgacaagtaagagtacaccacctcttataaaa 20031924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 11945247 - 11945305
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||| |||||||| ||||||||||||| || | |||||||||| |||||||||||||||    
T  11945247 gtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaaa 11945305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 43630819 - 43630761
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||| |||||||| ||||||||||||| || | |||||||||| |||||||||||||||    
T  43630819 gtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaaa 43630761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11809759 - 11809687
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttat 74  Q
    ||||||||||| | ||| ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||    
T  11809759 cctcttataaaaacaacaagtaagagtacaccacctcttataaa-acgacaagtaagagtacaccacctcttat 11809687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20032066 - 20031989
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| |  || ||||| |||||||| |||||||| |||| || | |||||||||| |||||||||||||||    
T  20032066 cctcttataaaaacgacaagtaagagtacaccacctcttatcaagacgacacgtaagagtacaccacctcttataaaa 20031989  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 49261407 - 49261452
Alignment:
Q  209 catcaataataatcatcatatataacaattacaatttcatatcaac 254  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||    
T  49261407 catcaataataatcttcatgtataacaattacaacttcatatcaac 49261452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 11809774 - 11809714
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    ||||| |||||||| ||||||||||| |  | |||||||||||| ||||||||||||||||    
T  11809774 agtaagagtacaccacctcttataaaaacaacaagtaagagtacaccacctcttataaaac 11809714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 20032014 - 20031955
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    |||| |||||||| ||||||||||| |  | |||||||||||| ||||||||||||||||    
T  20032014 gtaagagtacaccacctcttataaaaacaacaagtaagagtacaccacctcttataaaac 20031955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 20032081 - 20032026
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttat 74  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||    
T  20032081 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttat 20032026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 636384 - 636310
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata 75  Q
    |||||||||||||  || ||||| |||||||| |||||||||||   || | |||||||||| ||||||||||||    
T  636384 cctcttataaagacgacaagtaagagtacaccacctcttataaaagcgacacgtaagagtacaccacctcttata 636310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 636432 - 636374
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| |||||||||||||  |  ||||||||||| ||||||||||||||    
T  636432 agtaagagtacaccacctcttataaagacaacgagtaagagtacaccacctcttataaa 636374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 636465 - 636407
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||  | || |||||||||||| ||||||||||||||    
T  636465 agtaagagtacaccacctcttataacaacgacaagtaagagtacaccacctcttataaa 636407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 20636879 - 20636961
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaac 254  Q
    ||||| ||||| |||| ||  |||| |||||||| | |||||||||||||  |||| |||||||||||||| ||||| |||||    
T  20636879 gcaagacaacatcatttaaacatatacagcaagtaaccatcaataataatattcatgtataacaattacaacttcatgtcaac 20636961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 43630525 - 43630443
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacct-gacataaacaaccaccaa 101  Q
    |||| |||||||| ||||||||| |  |  || |||||||||| ||||||||||||||||||||  |||||||||| ||||||    
T  43630525 gtaagagtacaccacctcttatacaacaacaacgtaagagtacaccacctcttataaaacacctaaacataaacaatcaccaa 43630443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 25263228 - 25263124
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaacgatggctaaaactacgacatc 123  Q
    |||||||| | ||||||||| || || | ||||||||| |||||||||| |||||||||| |||||||||  ||||||| |  |||  ||||||||| ||    
T  25263228 agtacaccacatcttataaacaacaaca-taagagtacaccacctcttacaaaacacctgaacataaacagtcaccaacaacagcttcaactacgacttc 25263130  T
Q  124 aacaac 129  Q
    ||||||    
T  25263129 aacaac 25263124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 43630616 - 43630563
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||||||| |||| |||||||| || | |||||||||| |||||||||||||||    
T  43630616 agtacaccacctcctataaagacgacacgtaagagtacaccacctcttataaaa 43630563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 11809808 - 11809748
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||| ||| | || ||||||||||||| |||||||||||||||    
T  11809808 agtaagagtacaccacctcttagaaaaacgataaagtaagagtacaccacctcttataaaa 11809748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 11945179 - 11945239
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||| ||| | || ||||||||||||| |||||||||||||||    
T  11945179 agtaagagtacaccacctcttagaaaaacgataaagtaagagtacaccacctcttataaaa 11945239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11945261 - 11945337
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||||||||  ||  |||| |||||||| ||||||||||| ||   | |||||||||| ||||||||||||||    
T  11945261 cctcttataaagacgacacgtaagagtacaccacctcttataaaaaaacgacgtaagagtacaccacctcttataaa 11945337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 20032115 - 20032055
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||| ||| | || ||||||||||||| |||||||||||||||    
T  20032115 agtaagagtacaccacctcttagaaaaacgataaagtaagagtacaccacctcttataaaa 20032055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 43630805 - 43630729
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||||||||  ||  |||| |||||||| ||||||||||| ||   | |||||||||| ||||||||||||||    
T  43630805 cctcttataaagacgacacgtaagagtacaccacctcttataaaaaaacgacgtaagagtacaccacctcttataaa 43630729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 219 - 361
Target Start/End: Complemental strand, 2524526 - 2524384
Alignment:
Q  219 aatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcat 318  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  2524526 aatcatcatatgtaacaattacaatttgatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatattaatcat 2524427  T
Q  319 cttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  2524426 cttattcatactctctgaacctcattataatcattaacaactt 2524384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 144 - 361
Target Start/End: Original strand, 6576354 - 6576571
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||| ||  ||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||     
T  6576354 atcttaatgatattattacatcacaatagcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaac 6576453  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcat 343  Q
    ||||||||||| ||||||||||||||||||| |||| || ||| ||||||||  ||||||  ||  |||||||||||||||||  ||||| |||| ||||    
T  6576454 ttcatatcaacatctttcacaatatataaattttttcacttttaatcatcaacttaaatccacaacattaatcatcttattcatactctccgaacttcat 6576553  T
Q  344 tataatcattaacaactt 361  Q
    ||||||||||||||||||    
T  6576554 tataatcattaacaactt 6576571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 172 - 334
Target Start/End: Complemental strand, 24865614 - 24865452
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    ||||| ||||| |||| ||  ||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||    
T  24865614 gcaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaattacaacttcatatcaacatctttcacaatatata 24865515  T
Q  272 aatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctct 334  Q
    |||||||| |||||| |||||||||||||||||||| |||||||||||||||||| |||||||    
T  24865514 aatattttcacatttaatcatcaaagtaaatcatcaatattaatcatcttattcatcctctct 24865452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 193 - 323
Target Start/End: Original strand, 22501018 - 22501148
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||||||||||| | |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  22501018 atatgcagcaagttaccatcaatattaatcatcttatataacaattacaacttcatatcaacgtctttcacattatataaatattttcacatttaatcat 22501117  T
Q  293 caaagtaaatcatcattattaatcatcttat 323  Q
    ||||||||||||||| |||||||||||||||    
T  22501118 caaagtaaatcatcaatattaatcatcttat 22501148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 193 - 323
Target Start/End: Original strand, 22508952 - 22509082
Alignment:
Q  193 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcat 292  Q
    ||||||||||||| | |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  22508952 atatgcagcaagttaccatcaatattaatcatcttatataacaattacaacttcatatcaacgtctttcacattatataaatattttcacatttaatcat 22509051  T
Q  293 caaagtaaatcatcattattaatcatcttat 323  Q
    ||||||||||||||| |||||||||||||||    
T  22509052 caaagtaaatcatcaatattaatcatcttat 22509082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 194 - 334
Target Start/End: Complemental strand, 7672374 - 7672240
Alignment:
Q  194 tatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacattttatcatc 293  Q
    |||||| ||||||| ||||||||||||||||| |||||||||| |      ||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  7672374 tatgcatcaagtcaccatcaataataatcatcttatataacaact------tcatatcaacgtctttcacaatatataaatattttcacatttaatcatc 7672281  T
Q  294 aaagtaaatcatcattattaatcatcttattcaccctctct 334  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  7672280 aaagtaaatcatcaatattaatcatcttattcatcctctct 7672240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 24883610 - 24883713
Alignment:
Q  173 caaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 272  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| |||||||||||||||||    
T  24883610 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataa 24883709  T
Q  273 atat 276  Q
    ||||    
T  24883710 atat 24883713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 24436200 - 24436321
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    |||||||| |||||||||||||||||||||||||||||||||| || |||||||  || |||| ||||||||||||||||||| ||||||||||||||||    
T  24436200 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaa-aatcatccaatgtaaccattacaatttcatatcaacatctttcacaatatata 24436298  T
Q  272 aatatttttacattttatcatcaa 295  Q
    |||  ||| |||||| ||||||||    
T  24436299 aat-ctttcacatttaatcatcaa 24436321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 5032220 - 5032127
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||| |||| || ||||||||||| | ||||||||    
T  5032220 gcaaggcaacaacattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattataacttcatatcaacatttttcacaa 5032127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 24781735 - 24781643
Alignment:
Q  173 caaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| |||||||||||  |||||||||    
T  24781735 caaggcagcatcattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacaactttcacaa 24781643  T

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Target: chr2; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 22501128 - 22501195
Alignment:
Q  209 catcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatat 276  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22501128 catcaatattaatcatcttatataacaattacaacttcatatcaacgtctttcacattatataaatat 22501195  T

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Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 22509062 - 22509129
Alignment:
Q  209 catcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatat 276  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22509062 catcaatattaatcatcttatataacaattacaacttcatatcaacgtctttcacattatataaatat 22509129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 22702921 - 22703034
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    ||||| |||||||| ||||||||||   |  ||||||||||||| |||||||||| | |||||||||||||| ||  ||||||| | ||||| |||||||    
T  22702921 agtaagagtacaccacctcttataacacaacaaagtaagagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacg 22703020  T
Q  119 acatcaacaacaac 132  Q
    || |||||||||||    
T  22703021 acttcaacaacaac 22703034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 21367986 - 21368053
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgca-aggcaacaccattaaataatatgcagcaagtcaaca 210  Q
    ||||| ||||||||||||  ||||||||||| ||||| || |||||||||| ||||| ||||||||||    
T  21367986 atcttaatgatattaataaatcacaaccgcagaggcagcaacattaaataacatgcaacaagtcaaca 21368053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 23707674 - 23707605
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctg-acataaaca 93  Q
    |||||||| ||||||||| | ||  || |||||||||| |||||||||| |||||||||| |||||||||    
T  23707674 agtacaccacctcttatagaaaaacaacgtaagagtacaccacctcttacaaaacacctgaacataaaca 23707605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 24681152 - 24681220
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctg-acataaaca 93  Q
    |||||||| ||||||||||| || ||  |||||||||| |||||||||| |||||||||| |||||||||    
T  24681152 agtacaccacctcttataaacaacaac-gtaagagtacaccacctcttacaaaacacctgaacataaaca 24681220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 24917808 - 24917860
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctctta 73  Q
    |||| |||||||| |||||||||||||| ||| |||||||||| ||||||||||    
T  24917808 gtaagagtacaccacctcttataaagaa-aaacgtaagagtacaccacctctta 24917860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 37379221 - 37379282
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaac 79  Q
    ||||| |||||||| ||||||| ||| | || ||||||||||||| ||||||||||||||||    
T  37379221 agtaagagtacaccacctcttagaaaaacgataaagtaagagtacaccacctcttataaaac 37379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 37379255 - 37379315
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaaca 80  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||| ||||    
T  37379255 agtaagagtacaccacctcttataaa-acgacaagtaagagtacaccacctcttatagaaca 37379315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 37379353 - 37379430
Alignment:
Q  53 gtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaacgatggctaaaactacgacatcaacaac 129  Q
    |||||||||| | |||||||| |||||||||| |||||||||| ||||||| |  |||  ||||||||| ||||||||    
T  37379353 gtaagagtacactacctcttagaaaacacctgaacataaacaatcaccaacaacagcttcaactacgacttcaacaac 37379430  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 18359256 - 18359196
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaaca 80  Q
    |||| |||||||| ||||||||| |  |  ||||||||||||| |||||||||||||||||    
T  18359256 gtaagagtacaccacctcttatagaacaacaaagtaagagtacaccacctcttataaaaca 18359196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 172 - 361
Target Start/End: Complemental strand, 59449 - 59261
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||    
T  59449 gcaaggcaacaccattaaaaaatatgcagcaagtcaacatcaacaataatcatccaatataacaattacaacttcatatcaacatctttcacaatatata 59350  T
Q  272 aatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    |||  ||| |||||| ||||||||  ||||||  ||  |||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  59349 aat-ctttcacatttaatcatcaacttaaatccacaacattaatcatcttattcatacactctgaacctcattataatcattaacaactt 59261  T

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Target: scaffold0080; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 28724 - 28842
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||||| |||||||||||  |  ||||||||||||| |||||||||||||| ||||||||||||||||  |||||| | ||||| |||||||     
T  28724 gtaaaagtacaccacctcttataaaacaacaaagtaagagtacaccacctcttataaagcacctgacataaacaataaccaacaacggctacaactacgg 28823  T
Q  120 catcaacaacaacaccaac 138  Q
    | |||||||||||||||||    
T  28824 cttcaacaacaacaccaac 28842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 34189 - 34307
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||||| |||||||||||  |  ||||||||||||| |||||||||||||| ||||||||||||||||  |||||| | ||||| |||||||     
T  34189 gtaaaagtacaccacctcttataaaacaacaaagtaagagtacaccacctcttataaagcacctgacataaacaataaccaacaacggctacaactacgg 34288  T
Q  120 catcaacaacaacaccaac 138  Q
    | |||||||||||||||||    
T  34289 cttcaacaacaacaccaac 34307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 164 - 334
Target Start/End: Original strand, 1566 - 1736
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    |||||||  |||| ||||| |||| ||  ||||||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  1566 tcacaacaacaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaattacaacttcatatcaacgtctttcac 1665  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctct 334  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| | |||||||    
T  1666 aatatataaatattttcacatttaatcatcaaagtaaatcatcaatattaatcatcttattaatcctctct 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 173 - 361
Target Start/End: Original strand, 3073 - 3260
Alignment:
Q  173 caaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 272  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| | |||||| ||||||||    
T  3073 caaggcaacaacattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatttttcacgatatataa 3172  T
Q  273 atatttttacattttatcatcaaagtaaatcatcattattaatcatcttattcaccctctctgaacctcattataatcattaacaactt 361  Q
    ||  ||| |||||| ||||||||  ||||||  ||  |||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  3173 at-ctttcacatttaatcatcaacttaaatccacaacattaatcatcttattcatactctctgaacctcattataatcattaacaactt 3260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 172 - 322
Target Start/End: Original strand, 10903 - 11053
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    ||||| ||||| |||| ||  |||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  10903 gcaagacaacatcatttaaacatatgcagcaagtcacaatcaataataatcatcatatataacaattaaaaattcatatcaacgtctttcacaatatata 11002  T
Q  272 aatatttttacattttatcatcaaagtaaatcatcattattaatcatctta 322  Q
    |||||||| |||||| ||||||| ||||||||||||  |||||||||||||    
T  11003 aatattttcacatttaatcatcatagtaaatcatcaacattaatcatctta 11053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 93; Significance: 3e-45; HSPs: 4)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 310 - 599
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctga-cataaacaaccacc 99  Q
    |||||||||||||  ||  |||| |||||||| ||||||||||||| || | |||||||||| |||||||||| ||||||||||| ||||||||  ||||    
T  310 cctcttataaagacgacacgtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttacaaaacacctgaacataaacagtcacc 409  T
Q  100 aacgatggctaaaactacgacatcaacaac------aacaccaaca--ttcga--tcttcatgatattaatatgtcacaaccgcaaggcaacaccattaa 189  Q
    ||| |   ||  ||||||||| ||||||||      ||||  ||||  || ||  |||| |||||||||||   ||||||| ||||| ||||| ||||      
T  410 aacaactacttcaactacgacttcaacaacttagacaacattaacaacttagacatcttaatgatattaattcatcacaacagcaagacaacatcatttt 509  T
Q  190 ataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttt 279  Q
    |  ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  510 aacatatgcagcaagtcaccatcaataataatcatcatatataacaattataatttcatatcaacgtctttcacaatatataaatatttt 599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 263 - 320
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||| |||||||| ||||||||||||| || | |||||||||| ||||||||||||||    
T  263 gtaagagtacaccacctcttataaagacgatacgtaagagtacaccacctcttataaa 320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 296 - 353
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||| |||||||| ||||||||||||| || | |||||||||| ||||||||||||||    
T  296 gtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaa 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 195 - 255
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||| ||| | || ||||||||||||| |||||||||||||||    
T  195 agtaagagtacaccacctcttagaaaaacgataaagtaagagtacaccacctcttataaaa 255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 174 - 306
Target Start/End: Complemental strand, 6901 - 6769
Alignment:
Q  174 aaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaa 273  Q
    |||||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||  ||||||| | ||||||||||||||||||||||||||||    
T  6901 aaggcagcaccattaaataatatgcagcaagtcaacatgaacaataatcatcaaatataatcattacaactccatatcaacgtctttcacaatatataaa 6802  T
Q  274 tatttttacattttatcatcaaagtaaatcatc 306  Q
    |||||| |||||| |||||||||||||||||||    
T  6801 tattttcacatttaatcatcaaagtaaatcatc 6769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 7331 - 7222
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctg-acataaacaaccaccaacgatggctaaaactacg 118  Q
    |||| |||||||| ||||||||||| || ||  |||||||||| |||||||| | |||||||||| |||||||||  ||||||| |  |||  |||||||    
T  7331 gtaagagtacaccacctcttataaacaacaac-gtaagagtacaccacctctcacaaaacacctgaacataaacagtcaccaacaacagcttcaactacg 7233  T
Q  119 acatcaacaac 129  Q
    || ||||||||    
T  7232 acttcaacaac 7222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 133 - 266
Target Start/End: Complemental strand, 2557 - 2424
Alignment:
Q  133 accaacattcgatcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatata 232  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||| |    
T  2557 accaacattagatcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataaaatgcagcaagtcaacatcaacaataatcgtcaaataca 2458  T
Q  233 acaattacaatttcatatcaacgtctttcacaat 266  Q
    || ||||| | ||||||| ||| |||||||||||    
T  2457 accattacgacttcatataaacatctttcacaat 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 85121 - 85275
Alignment:
Q  150 atgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcata 249  Q
    ||||||||||||  ||| | | ||||||||||||||| || |||| ||||||||||||||||||| ||||||||||| ||| ||| ||||||| ||||||    
T  85121 atgatattaatacatcaaatcagcaaggcaacaccatcaattaatttgcagcaagtcaacatcaacaataatcatcaaatacaactattacaacttcata 85220  T
Q  250 tcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||| |||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  85221 tcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcat 85275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 79; Significance: 7e-37; HSPs: 3)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 164 - 353
Target Start/End: Complemental strand, 43872 - 43682
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  |||| |||||||| | |||||||||||||| |||||||||||| || ||| | |||||||||  |||||||    
T  43872 tcacaacagcaagacaacatcatttaaacatatacagcaagtaaccatcaataataatcttcatatataacatttgcaactccatatcaacaactttcac 43773  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattatt-aatcatcttattcaccctctctgaacctcattataatcatt 353  Q
    | |||||| || |||| |||||| |||||||| |||||||| || |||| |||||||||| ||| ||||||||||||||||||||||||||    
T  43772 attatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcatt 43682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 353
Target Start/End: Complemental strand, 47792 - 47602
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||| ||||| |||| ||  |||| || ||||| | |||||||||||||| |||||||||||| || ||| | |||||||||  |||||||    
T  47792 tcacaacagcaagacaacatcatttaaacatatacaacaagtaaccatcaataataatcttcatatataacatttgcaactacatatcaacaactttcac 47693  T
Q  264 aatatataaatatttttacattttatcatcaaagtaaatcatcattatt-aatcatcttattcaccctctctgaacctcattataatcatt 353  Q
    | |||||| || |||| |||||| |||||||| |||||||| || |||| |||||||||| ||| ||||||||||||||||||||||||||    
T  47692 attatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcatt 47602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 44038 - 43878
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||| ||| ||||||| | |||||||||| |||||| ||||||||||| ||| ||| |||||||     
T  44038 atcttaatgatattaatacatcacatcagcaaggcaacatcatcaaataatttacagcaagtcatcatcaacaataatcatcaaatacaaccattacaac 43939  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||| | |||||||||||||||||||||| | ||| || ||||||||||||||||||    
T  43938 ttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcat 43878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 150 - 324
Target Start/End: Complemental strand, 15592 - 15419
Alignment:
Q  150 atgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcata 249  Q
    |||||||||||   |||||||  ||||||| || ||||||||| |||||||||| ||||||||||| |||||||||  ||||||||||  ||| ||||||    
T  15592 atgatattaatgcatcacaacaacaaggcatcaacattaaata-tatgcagcaaatcaacatcaatgataatcatcgaatataacaatcgcaacttcata 15494  T
Q  250 tcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttatt 324  Q
    ||||| | |||||||||||||||||||||| |||||| ||||||||  ||||||| ||  |||||||||||||||    
T  15493 tcaacatttttcacaatatataaatattttcacatttaatcatcaacttaaatcaacaacattaatcatcttatt 15419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 150 - 324
Target Start/End: Complemental strand, 24650 - 24477
Alignment:
Q  150 atgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcata 249  Q
    |||||||||||   |||||||  ||||||| || ||||||||| |||||||||| ||||||||||| |||||||||  ||||||||||  ||| ||||||    
T  24650 atgatattaatgcatcacaacaacaaggcatcaacattaaata-tatgcagcaaatcaacatcaatgataatcatcgaatataacaatcgcaacttcata 24552  T
Q  250 tcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcatcattattaatcatcttatt 324  Q
    ||||| | |||||||||||||||||||||| |||||| ||||||||  ||||||| ||  |||||||||||||||    
T  24551 tcaacatttttcacaatatataaatattttcacatttaatcatcaacttaaatcaacaacattaatcatcttatt 24477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 144 - 277
Target Start/End: Original strand, 2912 - 3045
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| | ||||| | |||||||||| |||||| ||||||||||| ||| ||| |||||||     
T  2912 atcttaatgatattaatacatcacatcagcaaggcaacaccatcatataatttacagcaagtcatcatcaacaataatcatcaaatacaaccattacaac 3011  T
Q  244 ttcatatcaacgtctttcacaatatataaatatt 277  Q
    ||||||||||| ||||||||||||||||||||||    
T  3012 ttcatatcaacatctttcacaatatataaatatt 3045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 3066 - 3156
Alignment:
Q  266 tatataaatatttttacattttatcatcaaagtaaatcatcattattaa-tcatcttattcaccctctctgaacctcattataatcattaa 355  Q
    |||||| || |||| |||||| |||||||| |||||||| || |||||| |||||||| ||| |||||||||||||| |||||||||||||    
T  3066 tatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctgaacctcgttataatcattaa 3156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 362872 - 363032
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||||||| || |||| | ||||||||||||||||| ||||||||||  ||| ||  |||||||     
T  362872 atcttaatgatattaatacatcacatcagcaaggcaacaccatcaattaatttacagcaagtcaacatcaacaataatcatctaatacaatcattacaac 362971  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||||| ||||||| |||||||||||||| | ||| || ||||||||||||||||||    
T  362972 ttcatatcaacatctttcaaaatatataaatattctcaca-ttaatcatcaaagtaaatcat 363032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 10122 - 10029
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  10122 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 10029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 188 - 305
Target Start/End: Complemental strand, 36258 - 36142
Alignment:
Q  188 aaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatttttacatttt 287  Q
    ||||||| | ||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| |||||||||||||||||||||| | ||| ||     
T  36258 aaataatttacagcaagtcaacatcaacaataatcatctaatataaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-tta 36160  T
Q  288 atcatcaaagtaaatcat 305  Q
    ||||||||||||||||||    
T  36159 atcatcaaagtaaatcat 36142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 5600 - 5478
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||  ||||||  ||||||| |||||||||||  |||||||||||||||    
T  5600 gcaaggcagcaccattaaataatatgcagcaagttaacatcaacaataatcatccaatataaacattacaacttcatatcaacacctttcacaatatata 5501  T
Q  272 aatatttttacattttatcatcaa 295  Q
    |||  ||| |||||| ||||||||    
T  5500 aat-ctttcacatttaatcatcaa 5478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 9197 - 9106
Alignment:
Q  173 caaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcaca 264  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| |||||||||    
T  9197 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcaca 9106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 813 - 935
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    |||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||||| |||||||||||||||     
T  813 gcaaggcagcacgattagataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatatt 912  T
Q  272 aatatttttacattttatcatcaa 295  Q
    |||  ||| |||||| ||||||||    
T  913 aat-ctttcacatttaatcatcaa 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 305
Target Start/End: Complemental strand, 11092 - 10963
Alignment:
Q  175 aggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaat 274  Q
    |||||||||||| ||||||| | ||||||||||||||||| ||||||||||  ||| ||| ||||||| ||||||||||| ||||| |||||||||||||    
T  11092 aggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatcttttacaatatataaat 10993  T
Q  275 atttttacattttatcatcaaagtaaatcat 305  Q
    ||| | ||| |  ||||||||||||||||||    
T  10992 attctcaca-taaatcatcaaagtaaatcat 10963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 8282 - 8189
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    |||||||| |||||||||||||||||||||||||||||||||| || |||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  8282 gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaacaatcatccaatataaccattacaacttcatatcaacatctttcacaa 8189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 1e-26; HSPs: 15)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 163413 - 163277
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccacca 100  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  163413 cctcttataaaaacgacaagtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaacaactgacataaacaatcacca 163314  T
Q  101 acgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    || | | | | ||||||||| |||||||||||||||||    
T  163313 acaacgac-acaactacgacttcaacaacaacaccaac 163277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 76898 - 77019
Alignment:
Q  172 gcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatata 271  Q
    |||||||| ||||||||||||||||| ||||| |||| ||||| ||||||||||  ||||||| ||||||| |||||||| || ||||||||||||||||    
T  76898 gcaaggcagcaccattaaataatatgtagcaaatcaaaatcaacaataatcatccaatataaccattacaacttcatatccacatctttcacaatatata 76997  T
Q  272 aatatttttacattttatcatcaa 295  Q
    |  ||||| |||||| ||||||||    
T  76998 a--attttcacatttaatcatcaa 77019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 175668 - 175745
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||| || |||||||||||| |||||||||||||||    
T  175668 cctcttataaagacaacgagtaagagtacaccacctcttataaagacgacaagtaagagtacaccacctcttataaaa 175745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 153240 - 153153
Alignment:
Q  50 aaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacgacatcaacaacaacaccaa 137  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||| ||||||| | ||||| ||||||||| ||||||| ||||||||    
T  153240 aaagtaagagtataccacctcgtataaaacacctgacataaacaatcaccaacaacggctacaactacgacttcaacaataacaccaa 153153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 168413 - 168551
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccacc 99  Q
    ||||||||||| |  || ||||  |||||||| ||||||||||||| || | |||||||||| |||||||||||| ||||| || || | | ||| ||||    
T  168413 cctcttataaaaatgacaagtacgagtacaccacctcttataaagacgacacgtaagagtacaccacctcttatagaaacatctaacctgatcaatcacc 168512  T
Q  100 aacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||  | || || ||||||||| |||||||||||||||||    
T  168513 aaaaacggatacaactacgacttcaacaacaacaccaac 168551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 175767 - 175905
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata-aaacacctgacataaacaaccacc 99  Q
    |||||||||||||  ||  |||| |||||||| ||||||||||||| || | |||||||||| |||||||||||| ||||| || |||| | ||| || |    
T  175767 cctcttataaagacgacacgtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttatagaaacatctaacatgatcaatcatc 175866  T
Q  100 aacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    ||| |  | || |||||| || |||||||||||||||||    
T  175867 aacaacagatacaactacaacttcaacaacaacaccaac 175905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 153374 - 153314
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||||    
T  153374 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaac 153314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 163445 - 163369
Alignment:
Q  2 ctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    |||||||||| |  || ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  163445 ctcttataaaaacgacaagtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaa 163369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 175701 - 175777
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    |||||||||||||  || ||||| |||||||| |||||||||||   || |||||||||||| ||||||||||||||    
T  175701 cctcttataaagacgacaagtaagagtacaccacctcttataaaagcgacaagtaagagtacaccacctcttataaa 175777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 153534 - 153480
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    |||||||| ||||||||||| | || |||||||||||| ||||||||||||||||    
T  153534 agtacaccacctcttataaaaatgacaagtaagagtacaccacctcttataaaac 153480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 175752 - 175810
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||||| || | |||||||||| ||||||||||||||    
T  175752 agtaagagtacaccacctcttataaagacgacacgtaagagtacaccacctcttataaa 175810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 153606 - 153546
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaac 79  Q
    ||||| |||||||| || |||||||| | || |||||||||||| ||||||||||||||||    
T  153606 agtaagagtacaccaccccttataaaaacgacaagtaagagtacaccacctcttataaaac 153546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 153359 - 153282
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || ||||||||||||| |||||||||||||||    
T  153359 cctcttataaaaacgacaagtaagagtacaccacctcttataaa-acgacaaagtaagagtacaccacctcttataaaa 153282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 175653 - 175711
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| |||||||||||||  |  ||||||||||| ||||||||||||||    
T  175653 agtaagagtacaccacctcttataaagacaacgagtaagagtacaccacctcttataaa 175711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 153440 - 153384
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata 75  Q
    ||||| ||| |||| ||||||||||| | || |||||||||||| ||||||||||||    
T  153440 agtaagagtgcaccacctcttataaaaacgacaagtaagagtacaccacctcttata 153384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 59; Significance: 6e-25; HSPs: 5)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 295
Target Start/End: Complemental strand, 2567 - 2449
Alignment:
Q  178 caacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatt 277  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||| ||| | | ||||||||||||||||||| ||    
T  2567 caacactattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctt 2468  T
Q  278 t-ttacattttatcatcaa 295  Q
    |  ||||||| ||||||||    
T  2467 tcgtacatttaatcatcaa 2449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2908 - 2836
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctctta 73  Q
    ||||||| ||||| ||||||||| |||||||  ||||||||||||| || |||||||||||| ||||||||||    
T  2908 cctcttagaaagacaacgagtaagagtacactacctcttataaagacgacaagtaagagtacaccacctctta 2836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 3125 - 3067
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  3125 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 3067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3077 - 3002
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataa 76  Q
    |||||||||||||  ||  |||| |||||||| ||||||||| | | || |||||||||||| |||||||||||||    
T  3077 cctcttataaagacgacacgtaagagtacaccgcctcttatagacacgacaagtaagagtacaccacctcttataa 3002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3110 - 3036
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttata 75  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||| || | |||||||||| || |||||||||    
T  3110 cctcttataaaaacgacaagtaagagtacaccacctcttataaagacgacacgtaagagtacaccgcctcttata 3036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 8538 - 8379
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||| ||| ||||||| |||| |||||||||||||| ||||||||||| ||| ||  |||||||     
T  8538 atcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttgcaacaagtcaacatcaacaataatcatcaaatacaatcattacaac 8439  T
Q  244 ttcatatcaacgtctttcacaatatataaatatttttacattttatcatcaaagtaaatcat 305  Q
    ||||||||| | || |||||||||||||| |||| |  ||||  ||||||||||||||||||    
T  8438 ttcatatcatcatcattcacaatatataa-tattctctcatta-atcatcaaagtaaatcat 8379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 24898 - 24770
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||||||||||| ||| ||||||| | ||||||||||||||||| ||||||||||| ||| ||  |||||||     
T  24898 atcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacagcaagtcaacatcaacaataatcatcaaatacaatcattacaac 24799  T
Q  244 ttcatatcaacgtctttcacaatatataa 272  Q
    ||||||||| | || | ||||||||||||    
T  24798 ttcatatcatcatcatccacaatatataa 24770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 24705 - 24676
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  24705 aataataatcatcatatataacaattacaa 24676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 9e-21; HSPs: 5)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 172941 - 172802
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa-cacctgacataaacaaccac 98  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||||  || ||||||||||||| ||||||||||||||| || || |||| ||||| |||    
T  172941 cctcttataaaaacgacaagtaagagtacaccacctcttataaagccgacaaagtaagagtacaccacctcttataaaaacatctaacatgaacaatcac 172842  T
Q  99 caacgatggctaaaactacgacatcaacaacaacaccaac 138  Q
    |||| | || || ||||||||| |||||||||||||||||    
T  172841 caacaacggatacaactacgacttcaacaacaacaccaac 172802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 172956 - 172898
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaa 77  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| ||||||||||||||    
T  172956 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaa 172898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 173008 - 172930
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || ||||||||||||| |||||||||||||||    
T  173008 cctcttataaaaacgacaagtaagagtacaccgcctcttataaaaatgataaagtaagagtacaccacctcttataaaa 172930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 173041 - 172964
Alignment:
Q  1 cctcttataaagaaaacgagtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||||||||| |  || ||||| |||||||| ||||||||||| | || |||||||||||| || ||||||||||||    
T  173041 cctcttataaaaacgacaagtaagagtacacctcctcttataaaaacgacaagtaagagtacaccgcctcttataaaa 172964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 173056 - 172997
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| || ||||||||||||    
T  173056 agtaagagtacaccacctcttataaaaacgacaagtaagagtacacctcctcttataaaa 172997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 1887 - 1990
Alignment:
Q  164 tcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcac 263  Q
    ||||||| ||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||||||| ||||| || ||  |||||||||| |||||||     
T  1887 tcacaacagcaaggcaacatcatctaataataagcagcaagtcaacaacaataataatcatcatatacaacaagtataa-ctcatatcaacatctttcat 1985  T
Q  264 aatat 268  Q
    |||||    
T  1986 aatat 1990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 9645 - 9561
Alignment:
Q  181 caccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaa 265  Q
    ||||||||||||||||||||||||||||||||||   ||||||||  ||||||| ||||||| ||||||| ||| ||||||||||    
T  9645 caccattaaataatatgcagcaagtcaacatcaacggtaatcatccaatataaccattacaacttcatattaacatctttcacaa 9561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 14452 - 14332
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttat-aaaacacctgacataaacaaccaccaacgatggctaaaactac 117  Q
    ||||| |||||||| ||||||||||| |  | |||||||||||| ||||||||||| |||||| || |||| | ||| ||||||| | || || ||||||    
T  14452 agtaagagtacaccacctcttataaaaacaacaagtaagagtacaccacctcttataaaaacatctaacatgatcaatcaccaacaacggatacaactac 14353  T
Q  118 gacatcaacaacaacaccaac 138  Q
    ||| |||||||||||||||||    
T  14352 gacttcaacaacaacaccaac 14332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 48150 - 48265
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacg 118  Q
    ||||| |||||||| ||||||||||   |  ||||||| ||||| |||||||||| | |||||||||||||| ||  ||||||| | ||||| |||||||    
T  48150 agtaagagtacaccacctcttataacacaacaaagtaaaagtacaccacctcttacacaacacctgacataatcattcaccaacaacggctacaactacg 48249  T
Q  119 acatcaacaacaacac 134  Q
    || |||||||||||||    
T  48250 acttcaacaacaacac 48265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 146009 - 146123
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaacacctgacataaacaaccaccaacgatggctaaaactacga 119  Q
    |||| |||||||| ||||||||||   |  ||||||||||||| ||||| |||| | |||||||||||||| ||  ||||||| | ||||| ||||||||    
T  146009 gtaagagtacaccacctcttataacacaacaaagtaagagtacaccaccacttacacaacacctgacataatcattcaccaacaacggctacaactacga 146108  T
Q  120 catcaacaacaacac 134  Q
    | |||||||||||||    
T  146109 cttcaacaacaacac 146123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 13441 - 13549
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||| ||| | | ||||||||||| ||| | ||||| |||| |||||||||||||| ||||||||||| ||| |   |||||||     
T  13441 atcttaatgatattaatatatcagatcagcaaggcaacaacatcatataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaac 13540  T
Q  244 ttcatatca 252  Q
    |||||||||    
T  13541 ttcatatca 13549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 7893 - 7764
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattac-aa 242  Q
    ||||| ||||||||||||  ||||| | ||||||||||| ||| |||||||   |||||||||||| |||| ||||||||||| ||| ||  ||||| ||    
T  7893 atcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataattcacagcaagtcaacgtcaacaataatcatcaaatacaatcattacaaa 7794  T
Q  243 tttcatatcaacgtctttcacaatatataa 272  Q
     ||||||||| | || | ||||||||||||    
T  7793 cttcatatcatcatcatccacaatatataa 7764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Complemental strand, 7699 - 7670
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  7699 aataataatcatcatatataacaattacaa 7670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 34227 - 34286
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  34227 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaa 34286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 208761 - 208820
Alignment:
Q  19 agtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || |||||||||||| |||||||||||||||    
T  208761 agtaagagtacaccacctcttataaaaacgacaagtaagagtacaccacctcttataaaa 208820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 208727 - 208787
Alignment:
Q  19 agtaatagtacaccccctcttataaagaaga-aaagtaagagtacgccacctcttataaaa 78  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||| |||||||||||||||    
T  208727 agtaagagtacaccacctcttataaaaacgataaagtaagagtacaccacctcttataaaa 208787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 309 - 414
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||| |||||||||||  |||||| | || |||||||||||||| ||||||||||| ||||||  |||| ||     
T  309 atcttaatgatattaatacatcacatcagca-ggcaacaccatcgaataatttacaacaagtcaacatcaacaataatcatcaaatataatcattataac 407  T
Q  244 ttcatat 250  Q
    |||||||    
T  408 ttcatat 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 23591 - 23486
Alignment:
Q  144 atcttcatgatattaatatgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaat 243  Q
    ||||| ||||||||||||  ||||| | ||| |||||||||||  |||||| | || |||||||||||||| ||||||||||| ||||||  |||| ||     
T  23591 atcttaatgatattaatacatcacatcagca-ggcaacaccatcgaataatttacaacaagtcaacatcaacaataatcatcaaatataatcattataac 23493  T
Q  244 ttcatat 250  Q
    |||||||    
T  23492 ttcatat 23486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 18546 - 18458
Alignment:
Q  178 caacaccattaaataatatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaat 266  Q
    ||||| ||| ||||||| |||| |||||||||||||| ||||||||||| ||| |   ||||||| ||||||||| | || ||||||||    
T  18546 caacaacatcaaataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaacttcatatcatcatcattcacaat 18458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 95631 - 95683
Alignment:
Q  310 attaatcatctta-ttcaccctctctgaacctcattataatcattaacaactt 361  Q
    ||||||||||||| ||||| |||||||||||||||||||||| | ||||||||    
T  95631 attaatcatcttaattcacgctctctgaacctcattataatcttaaacaactt 95683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 13904 - 13959
Alignment:
Q  25 agtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaaca 80  Q
    |||||||| |||||||||||  | ||| |||||||||| |||||||||||||||||    
T  13904 agtacaccacctcttataaaacaaaaacgtaagagtacaccacctcttataaaaca 13959  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 9926 - 9955
Alignment:
Q  213 aataataatcatcatatataacaattacaa 242  Q
    ||||||||||||||||||||||||||||||    
T  9926 aataataatcatcatatataacaattacaa 9955  T

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Target: scaffold1783 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 64 - 123
Alignment:
Q  20 gtaatagtacaccccctcttataaagaagaaaagtaagagtacgccacctcttataaaaca 80  Q
    |||| |||||||| ||||||||||| || || | ||||||||| |||||||||||||||||    
T  64 gtaagagtacaccacctcttataaacaacaaca-taagagtacaccacctcttataaaaca 123  T

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