View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8335_high_1 (Length: 846)
Name: NF8335_high_1
Description: NF8335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8335_high_1 |
 |  |
|
| [»] scaffold0014 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 339; Significance: 0; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 469 - 827
Target Start/End: Complemental strand, 33049978 - 33049621
Alignment:
| Q |
469 |
cacatattcaccttcctccatattcagcatctcgtattgttttcttaatgcttgaagcctcactttcttcaatttttcatatccataatacaatctctca |
568 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
33049978 |
cacatattcaccatcctccatattca-catctcgtattgttttcttaatgcttgaagcctcactttcttcaattttttatatccataatacaatctctca |
33049880 |
T |
 |
| Q |
569 |
agtgtatctcaagtttctttcgcattttcacaacgcataatcttctcaaaaatatcactattcacacactagtgaatgagaaacattgcatttccatgtt |
668 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33049879 |
agtgtatctcaagtttctttcgcattttcacaacgcataatcttctcaaaaatatcactattcacacactagtgaatgagaaacattgcatttccatgtt |
33049780 |
T |
 |
| Q |
669 |
tcttcttcgtatctttgtttgcagtttgttgaacctcagttgtgtttcttgcaagtgttggtataatatcgttcacaacatcaagaacatattggtatat |
768 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33049779 |
tcttcttcgtatctttgtttgcagtttgttgaacctcagttgcgtttcttgcaagtgttggtataatatcgttcacaacatcaagaacatattggtatat |
33049680 |
T |
 |
| Q |
769 |
gaagattaccttcatcttcacgatccattcatcatagctcttgccattgaacactgata |
827 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33049679 |
gaagattaccttcatcttcacgatccattcatcatagctcttgccattgaacactgata |
33049621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 37 - 343
Target Start/End: Complemental strand, 33050290 - 33049975
Alignment:
| Q |
37 |
ccttggaactttcttggacttgcattcagatacataatgcccccattttttaagattatatcattgaatctcattctttctcgaagctttctttattttt |
136 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
33050290 |
ccttggaactttcttggacttgaattcagatacataatgcccccattttttaagattatatcattgaatctccttctttctcgaagctttctttattt-- |
33050193 |
T |
 |
| Q |
137 |
acttgaaccttcatcattcttggaagcattatcattccaataattctttcctttcttgtatttccttttatttgtatattgagcttgcaaagcttgatct |
236 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33050192 |
-----aaccttaatcattcttggaagctttatcattccaataattctttcctttcttgcatttccttttatttgtatattgagcttgcaaagcttgatct |
33050098 |
T |
 |
| Q |
237 |
aatgcaaaacctttggatttttctttgttcctatc----------------agtgcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaat |
320 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33050097 |
aatgcagaacctttggatttttctttgttcctatcggttaacctcaattcatgtgcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaat |
33049998 |
T |
 |
| Q |
321 |
ctttggattcttctaagaccaca |
343 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
33049997 |
ctttggattcttctaagaccaca |
33049975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 273 - 618
Target Start/End: Complemental strand, 9504581 - 9504236
Alignment:
| Q |
273 |
gtgcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaatctttggattcttctaagaccacaacaatatgatcaaatcttggtgtcaaaat |
372 |
Q |
| |
|
|||||||||| ||| | || ||||| || |||||||| ||| || ||||| ||||| |||| | |||| ||||| ||||||||||||| ||| || | |
|
|
| T |
9504581 |
gtgcttcaagactttcctgcagttcctctatcttcatagaatctaagtctttagattcctctagggccactacaatgtgatcaaatcttgatgttaaggt |
9504482 |
T |
 |
| Q |
373 |
tctgagaaccttttctaacttcatcaattcagtgattgtatcattatttcttatcatctgatttgctagattcaccagtttatcaaagtattgactcaca |
472 |
Q |
| |
|
| ||||||||||||| | |||||||| ||||||| || ||| ||| ||| |||||||||||| ||||| | || ||||||||||||||||| ||| |
|
|
| T |
9504481 |
tttgagaaccttttccaccttcatcacatcagtgacagtttcaccattccttgtcatctgatttgtaagattgatcaccttatcaaagtattgactaaca |
9504382 |
T |
 |
| Q |
473 |
tattcaccttcctccatattcagcatctcgtattgttttcttaatgcttgaagcctcactttcttcaatttttcatatccataatacaatctctcaagtg |
572 |
Q |
| |
|
|||| |||| ||||| ||| || || || ||| |||| || | |||||| ||||| |||||||| || ||| |||||||||||| |||| | || |
|
|
| T |
9504381 |
gattcttcttcttccattgtcaacacttcatactgtcttctcaaaggttgaagtctcaccttcttcaacttaccatcaccataatacaatttctctaatg |
9504282 |
T |
 |
| Q |
573 |
tatctcaagtttctttcgcattttcacaacgcataatcttctcaaa |
618 |
Q |
| |
|
|||| || || || ||| | ||||| || |||| ||||||||||| |
|
|
| T |
9504281 |
tatcccatgtctccttcacgctttcataatgcatgatcttctcaaa |
9504236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 275 - 815
Target Start/End: Original strand, 28452125 - 28452669
Alignment:
| Q |
275 |
gcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaatctttggattcttctaagaccacaacaatatgatcaaatcttggtgtcaaaattc |
374 |
Q |
| |
|
|||||||| ||||| || | |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| |
|
|
| T |
28452125 |
gcttcaagacttgcctgcaattcttcaatcttgatcacatccaaatctttggattcttctaagactacaacaatatgatcaaaccttggtgtcaaggttc |
28452224 |
T |
 |
| Q |
375 |
tgagaaccttttctaa----cttcatcaattcagtgattgtatcattatttcttatcatctgatttgctagattcaccagtttatcaaagtattgactca |
470 |
Q |
| |
|
||| ||||| |||| ||||||||| ||| || | || ||| ||| | || ||||||| ||||| | ||| |||| ||| || | |||| |
|
|
| T |
28452225 |
tgattaccttctctatatatcttcatcaaatcaacaatgatgtctcaattcctttttatttgatttgtaagatttatcagattattaaaatacttactcg |
28452324 |
T |
 |
| Q |
471 |
catattcaccttcctccatattcagcatctcgtattgttttcttaatgcttgaagcctcactttcttcaatttttcatatccataatacaatctctcaag |
570 |
Q |
| |
|
| |||||||||| |||| || || | |||||| | |||||||||||||| | ||| |||||||| ||| ||| |||| ||||||| |||| || |
|
|
| T |
28452325 |
ctgattcaccttctgccatggacaacaatttttattgtctccttaatgcttgaagtcccaccttcttcaactttccatctccagaatacaacctcttaat |
28452424 |
T |
 |
| Q |
571 |
tgtatctcaagtttctttcgcattttcacaacgcataatcttctcaaaaatatcactattcacacactagtgaatgagaaacattgcatttccatgtttc |
670 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||| |||||||| ||||| ||| ||| |||| ||||||||||||||||||| || |||| ||| |
|
|
| T |
28452425 |
agtatctcaagtttccttcgcattttcacagtgcatgatcttctccaaaatctcatcattaacaccatagtgaatgagaaacattgatttcccatctttt |
28452524 |
T |
 |
| Q |
671 |
ttcttcgtatctttgtttgcagtttgttgaacctcagttgtgtttcttgcaagtgttggtataatatcgttcacaacatcaagaacatattggtatatga |
770 |
Q |
| |
|
||||||| |||||| | | || ||||||||||||| ||||||||||||||||| |||||| | ||| ||| || |||||||||||| ||| || || |
|
|
| T |
28452525 |
ttcttcgcatctttatgtccaatttgttgaacctctgttgtgtttcttgcaagcattggtagaccatccttcgcagcatcaagaacatcttgataccgga |
28452624 |
T |
 |
| Q |
771 |
agattaccttcatcttcacgatccattcatcatagctcttgccat |
815 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
28452625 |
atattaccttcatcttcacgatccattgatcataaatcttgccat |
28452669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 28451893 - 28451933
Alignment:
| Q |
39 |
ttggaactttcttggacttgcattcagatacataatgcccc |
79 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
28451893 |
ttggaactttcttagacttgcattcagatgcataatgcccc |
28451933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 64; Significance: 2e-27; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 273 - 540
Target Start/End: Original strand, 45503996 - 45504263
Alignment:
| Q |
273 |
gtgcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaatctttggattcttctaagaccacaacaatatgatcaaatcttggtgtcaaaat |
372 |
Q |
| |
|
|||||||||| ||||| || ||||| || |||||||| ||| || ||||| ||||| |||| | |||| ||||| ||||||||||||| ||| || | |
|
|
| T |
45503996 |
gtgcttcaagacttgcctgcagttcctctatcttcatagaatctaagtctttagattcctctagggccactacaatgtgatcaaatcttgatgttaaggt |
45504095 |
T |
 |
| Q |
373 |
tctgagaaccttttctaacttcatcaattcagtgattgtatcattatttcttatcatctgatttgctagattcaccagtttatcaaagtattgactcaca |
472 |
Q |
| |
|
||||||||||||||| | |||||||| ||||||| || ||| ||| |||||||||||||||| |||||| | || ||||||||||||||||| ||| |
|
|
| T |
45504096 |
tctgagaaccttttccaccttcatcacatcagtgacagtttcaccattccttatcatctgatttgttagattgatcaccttatcaaagtattgactaaca |
45504195 |
T |
 |
| Q |
473 |
tattcaccttcctccatattcagcatctcgtattgttttcttaatgcttgaagcctcactttcttcaa |
540 |
Q |
| |
|
||||| |||| ||||| ||| || || || ||| |||| || |||||||| ||||| |||||||| |
|
|
| T |
45504196 |
tattcttcttcttccattgtcaacacttcatactgtcttctcaaagcttgaagtctcaccttcttcaa |
45504263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 273 - 540
Target Start/End: Original strand, 45496254 - 45496521
Alignment:
| Q |
273 |
gtgcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaatctttggattcttctaagaccacaacaatatgatcaaatcttggtgtcaaaat |
372 |
Q |
| |
|
|||||||||| ||||| || || || || |||||||| ||| || ||||| ||||| |||| | |||| ||||| ||||||||||||| ||| || | |
|
|
| T |
45496254 |
gtgcttcaagacttgcctgcagctcctctatcttcatagaatctaagtctttagattcctctagggccactacaatgtgatcaaatcttgatgttaaggt |
45496353 |
T |
 |
| Q |
373 |
tctgagaaccttttctaacttcatcaattcagtgattgtatcattatttcttatcatctgatttgctagattcaccagtttatcaaagtattgactcaca |
472 |
Q |
| |
|
||||||||||||||| | |||||||| ||||||| || ||| ||| |||||||||||||||| |||||| | || ||||||||||||||||| ||| |
|
|
| T |
45496354 |
tctgagaaccttttccaccttcatcacatcagtgacagtttcaccattccttatcatctgatttgttagattgatcaccttatcaaagtattgactaaca |
45496453 |
T |
 |
| Q |
473 |
tattcaccttcctccatattcagcatctcgtattgttttcttaatgcttgaagcctcactttcttcaa |
540 |
Q |
| |
|
||||| |||| ||||| ||| || || || ||| |||| || |||||||| ||||| |||||||| |
|
|
| T |
45496454 |
tattcttcttcttccattgtcaacacttcatactgtcttctcaaagcttgaagtctcaccttcttcaa |
45496521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 273 - 540
Target Start/End: Original strand, 21793691 - 21793958
Alignment:
| Q |
273 |
gtgcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaatctttggattcttctaagaccacaacaatatgatcaaatcttggtgtcaaaat |
372 |
Q |
| |
|
|||||||||| ||||| || ||||| || |||||||| ||| || ||||| ||||| |||| | |||| ||||| ||||||||||||| ||| || | |
|
|
| T |
21793691 |
gtgcttcaagacttgcctgcagttcctctatcttcatagaatctaagtctttagattcctctagggccactacaatgtgatcaaatcttgatgttaaggt |
21793790 |
T |
 |
| Q |
373 |
tctgagaaccttttctaacttcatcaattcagtgattgtatcattatttcttatcatctgatttgctagattcaccagtttatcaaagtattgactcaca |
472 |
Q |
| |
|
||||||||||||||| | |||||||| ||||||| || ||| ||| ||| |||||||||||| ||||| | || ||||||||||||||||| ||| |
|
|
| T |
21793791 |
tctgagaaccttttccaccttcatcacatcagtgacagtttcaccattccttgtcatctgatttgtaagattgatcaccttatcaaagtattgactaaca |
21793890 |
T |
 |
| Q |
473 |
tattcaccttcctccatattcagcatctcgtattgttttcttaatgcttgaagcctcactttcttcaa |
540 |
Q |
| |
|
|||| |||| ||||| ||| || || || ||| |||| || |||||||| ||||| |||||||| |
|
|
| T |
21793891 |
aattcttcttcttccattgtcaacacttcatactgtcttctcaaagcttgaagtctcaccttcttcaa |
21793958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 273 - 540
Target Start/End: Complemental strand, 5984365 - 5984098
Alignment:
| Q |
273 |
gtgcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaatctttggattcttctaagaccacaacaatatgatcaaatcttggtgtcaaaat |
372 |
Q |
| |
|
|||||||||| ||||| || ||||| || |||||||| ||| || ||||| ||||| |||| | |||| ||||| ||||||||||||| ||| || | |
|
|
| T |
5984365 |
gtgcttcaagacttgcatgtagttcctctatcttcatagaatctaagtctttagattcctctagggccactacaatgtgatcaaatcttgatgttaaggt |
5984266 |
T |
 |
| Q |
373 |
tctgagaaccttttctaacttcatcaattcagtgattgtatcattatttcttatcatctgatttgctagattcaccagtttatcaaagtattgactcaca |
472 |
Q |
| |
|
| ||||||| ||||| | |||||||| ||||||| || ||| |||| ||| |||||||||||| ||||| | || ||||||||||||||||| ||| |
|
|
| T |
5984265 |
tatgagaactttttccaccttcatcacatcagtgacagtttcactattccttgtcatctgatttgtaagattgagcaccttatcaaagtattgactaaca |
5984166 |
T |
 |
| Q |
473 |
tattcaccttcctccatattcagcatctcgtattgttttcttaatgcttgaagcctcactttcttcaa |
540 |
Q |
| |
|
|||| |||| ||||| ||| || || || ||| |||| || |||||||| ||||| |||||||| |
|
|
| T |
5984165 |
gattcttcttcttccattgtcaacacttcatactgtcttctcaaagcttgaagtctcaccttcttcaa |
5984098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 51; Significance: 9e-20; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 273 - 543
Target Start/End: Original strand, 16847069 - 16847339
Alignment:
| Q |
273 |
gtgcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaatctttggattcttctaagaccacaacaatatgatcaaatcttggtgtcaaaat |
372 |
Q |
| |
|
|||||||||| |||||||| || || || |||||||| ||| |||||||| ||||| |||| | |||| ||||| ||||||||| ||| ||| || | |
|
|
| T |
16847069 |
gtgcttcaagacttgcttgcagctcctctatcttcatagaatctaaatctttagattcctctagggccactacaatgtgatcaaattttgatgttaaggt |
16847168 |
T |
 |
| Q |
373 |
tctgagaaccttttctaacttcatcaattcagtgattgtatcattatttcttatcatctgatttgctagattcaccagtttatcaaagtattgactcaca |
472 |
Q |
| |
|
||||||||||||||| | |||||||| ||||||| || ||| ||| ||| |||||||||||| ||||| | || ||||||||||||||||| ||| |
|
|
| T |
16847169 |
tctgagaaccttttccaccttcatcacatcagtgacagtttcaccattccttgtcatctgatttgtaagattgatcaccttatcaaagtattgactaaca |
16847268 |
T |
 |
| Q |
473 |
tattcaccttcctccatattcagcatctcgtattgttttcttaatgcttgaagcctcactttcttcaattt |
543 |
Q |
| |
|
|||| |||| ||||| ||| || || || ||| |||| || ||||| || ||||| ||||||||||| |
|
|
| T |
16847269 |
aattcttcttcttccattgtcaacacttcataatgtcttctcaaagcttgcagtctcaccttcttcaattt |
16847339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 680 - 804
Target Start/End: Original strand, 11355747 - 11355871
Alignment:
| Q |
680 |
tctttgtttgcagtttgttgaacctcagttgtgtttcttgcaagtgttggtataatatcgttcacaacatcaagaacatattggtatatgaagattacct |
779 |
Q |
| |
|
||||||||||||| ||||| || ||||||| ||||||||| | || ||||| ||| || ||||| |||||||||| ||||||| ||||||| |||| |
|
|
| T |
11355747 |
tctttgtttgcagcttgtttcacatcagttgcgtttcttgccaatgctggtaccccatcattaacaacttcaagaacatcttggtatctgaagatcacct |
11355846 |
T |
 |
| Q |
780 |
tcatcttcacgatccattcatcata |
804 |
Q |
| |
|
||||||||||||||||| |||||| |
|
|
| T |
11355847 |
ccatcttcacgatccattgatcata |
11355871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 477
Target Start/End: Complemental strand, 61934 - 61808
Alignment:
| Q |
350 |
tgatcaaatcttggtgtcaaaattctgagaaccttttctaacttcatcaattcagtgattgtatcattatttcttatcatctgatttgctagattcacca |
449 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||| | |||||||| |||||||| || ||| ||| ||| |||||||||||| ||||| | || |
|
|
| T |
61934 |
tgatcaaatcttgatgtcacgattctgagaaccttttccaccttcatcacatcagtgatagtttcaccattccttgtcatctgatttgtaagattga-ca |
61836 |
T |
 |
| Q |
450 |
gtttatcaaagtattgactcacatattc |
477 |
Q |
| |
|
||||||||||||||||| |||||||| |
|
|
| T |
61835 |
ccttatcaaagtattgactaacatattc |
61808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 273 - 618
Target Start/End: Original strand, 7500570 - 7500915
Alignment:
| Q |
273 |
gtgcttcaaggcttgcttgaagttcttcaatcttcatcacatccaaatctttggattcttctaagaccacaacaatatgatcaaatcttggtgtcaaaat |
372 |
Q |
| |
|
|||||||||| |||||||| ||||| || |||||| | ||| || ||||| ||||| ||| | |||| ||||| ||||||||||||| ||| || | |
|
|
| T |
7500570 |
gtgcttcaagacttgcttgcagttcctctatcttcgtagaatctaagtctttagattcccctagggccactacaatgtgatcaaatcttgatgttaaggt |
7500669 |
T |
 |
| Q |
373 |
tctgagaaccttttctaacttcatcaattcagtgattgtatcattatttcttatcatctgatttgctagattcaccagtttatcaaagtattgactcaca |
472 |
Q |
| |
|
||||||||||||||| | |||||||| |||||| | ||| ||| ||| |||||||||||| ||||| | || ||||||||||||||||| ||| |
|
|
| T |
7500670 |
tctgagaaccttttccaccttcatcacatcagtggcaatttcaccattccttgtcatctgatttgtaagattgatcaccttatcaaagtattgactaaca |
7500769 |
T |
 |
| Q |
473 |
tattcaccttcctccatattcagcatctcgtattgttttcttaatgcttgaagcctcactttcttcaatttttcatatccataatacaatctctcaagtg |
572 |
Q |
| |
|
|||| ||| ||||| ||| || || || ||| |||| || |||||||| ||||| |||||||| || ||| ||| |||||| | |||| | || |
|
|
| T |
7500770 |
aattcttcttattccattgtcaacacttcatactgtcttctcaaagcttgaagtctcaccttcttcaacttaccatcaccagaatacagtttctctaatg |
7500869 |
T |
 |
| Q |
573 |
tatctcaagtttctttcgcattttcacaacgcataatcttctcaaa |
618 |
Q |
| |
|
||| || || || |||||| ||||| || |||| ||||||||||| |
|
|
| T |
7500870 |
catcccatgtctccttcgcactttcataatgcatgatcttctcaaa |
7500915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 768 - 813
Target Start/End: Original strand, 7501065 - 7501110
Alignment:
| Q |
768 |
tgaagattaccttcatcttcacgatccattcatcatagctcttgcc |
813 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||| || ||||||| |
|
|
| T |
7501065 |
tgaagatcaccttcatcttcacgatccattgatcaaagttcttgcc |
7501110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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