View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8341_low_22 (Length: 221)
Name: NF8341_low_22
Description: NF8341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8341_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 34685394 - 34685556
Alignment:
| Q |
38 |
tactcatgttttttattcatttatttcagtccactattccccaatggagttgccatagttcaactaaacttattcaacttatgatggttccggtcatatt |
137 |
Q |
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| T |
34685394 |
tactcatgttttttattcatttatttcagtccactattccccaatggagttgccatagttcaactaaacttattcaacttatgatggttccggtcatatt |
34685493 |
T |
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| Q |
138 |
taaattgggacactctcaatcaattcaaatttaactaaaattcagcaataatttgaattctaa |
200 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |
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| T |
34685494 |
taaattgggacactctcaatcaattcaactttaactaaaattcagcaataacttgaattctaa |
34685556 |
T |
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