View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8347_high_1 (Length: 537)

Name: NF8347_high_1
Description: NF8347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8347_high_1
NF8347_high_1
[»] chr7 (71 HSPs)
chr7 (1-528)||(13849285-13849812)
chr7 (1-528)||(16573391-16573918)
chr7 (1-528)||(16591744-16592271)
chr7 (6-528)||(7529275-7529797)
chr7 (6-500)||(39995221-39995714)
chr7 (307-528)||(7507205-7507427)
chr7 (104-518)||(15690106-15690508)
chr7 (104-518)||(15697699-15698101)
chr7 (7-268)||(12201469-12201721)
chr7 (7-268)||(12208074-12208326)
chr7 (11-174)||(7506913-7507078)
chr7 (442-528)||(15731648-15731734)
chr7 (328-513)||(15725636-15725824)
chr7 (33-156)||(14039170-14039293)
chr7 (33-156)||(14349200-14349323)
chr7 (380-525)||(42041567-42041711)
chr7 (98-156)||(15103949-15104007)
chr7 (104-156)||(81690-81742)
chr7 (104-156)||(12800902-12800954)
chr7 (104-156)||(16187342-16187394)
chr7 (104-156)||(16475749-16475801)
chr7 (104-156)||(18009801-18009853)
chr7 (104-156)||(23442698-23442750)
chr7 (114-173)||(15339320-15339379)
chr7 (114-173)||(15710618-15710677)
chr7 (41-156)||(16668012-16668127)
chr7 (41-156)||(17642382-17642497)
chr7 (105-156)||(46681807-46681858)
chr7 (104-166)||(14250147-14250209)
chr7 (106-273)||(21518787-21518945)
chr7 (106-155)||(12554950-12554999)
chr7 (104-156)||(13318195-13318247)
chr7 (104-156)||(14169144-14169196)
chr7 (104-156)||(14173391-14173443)
chr7 (104-156)||(14581171-14581223)
chr7 (104-156)||(15097578-15097630)
chr7 (104-156)||(15437183-15437235)
chr7 (104-156)||(16073583-16073635)
chr7 (104-156)||(46348366-46348418)
chr7 (109-156)||(3328301-3328348)
chr7 (109-156)||(12695099-12695146)
chr7 (353-431)||(35366213-35366289)
chr7 (104-154)||(45185948-45185998)
chr7 (104-173)||(6412322-6412391)
chr7 (104-156)||(11857316-11857368)
chr7 (109-153)||(13020182-13020226)
chr7 (104-156)||(14265615-14265667)
chr7 (104-156)||(15722825-15722877)
chr7 (104-156)||(17182324-17182376)
chr7 (104-156)||(19146071-19146123)
chr7 (104-156)||(19600360-19600412)
chr7 (104-156)||(20745470-20745522)
chr7 (104-156)||(35962346-35962398)
chr7 (34-156)||(19152354-19152476)
chr7 (34-156)||(20751753-20751875)
chr7 (111-156)||(11219736-11219781)
chr7 (104-156)||(14281266-14281318)
chr7 (123-158)||(15085552-15085587)
chr7 (216-262)||(18009704-18009751)
chr7 (106-156)||(10520316-10520366)
chr7 (3-53)||(21518684-21518734)
chr7 (368-430)||(41782876-41782938)
chr7 (211-252)||(7507092-7507133)
chr7 (123-156)||(14945501-14945534)
chr7 (123-156)||(15373094-15373127)
chr7 (368-417)||(15731595-15731644)
chr7 (123-156)||(37243929-37243962)
chr7 (104-156)||(15142711-15142763)
chr7 (77-125)||(15731320-15731368)
chr7 (104-156)||(15839076-15839128)
chr7 (198-257)||(46348450-46348510)
[»] chr8 (46 HSPs)
chr8 (1-528)||(43112175-43112702)
chr8 (12-320)||(20386863-20387169)
chr8 (2-528)||(15003479-15004006)
chr8 (3-520)||(22616791-22617307)
chr8 (316-528)||(20385355-20385567)
chr8 (307-528)||(22434314-22434529)
chr8 (1-285)||(22433992-22434275)
chr8 (15-477)||(15267399-15267848)
chr8 (3-272)||(22920355-22920624)
chr8 (319-518)||(22521607-22521805)
chr8 (3-156)||(20011630-20011783)
chr8 (41-156)||(25624215-25624330)
chr8 (104-156)||(14594366-14594418)
chr8 (104-156)||(21683305-21683357)
chr8 (104-156)||(21687654-21687706)
chr8 (104-156)||(21690047-21690099)
chr8 (104-156)||(23652600-23652652)
chr8 (104-156)||(20006744-20006796)
chr8 (104-156)||(21685697-21685749)
chr8 (104-156)||(36445377-36445429)
chr8 (469-528)||(21415417-21415476)
chr8 (104-158)||(20783482-20783536)
chr8 (104-158)||(22175678-22175732)
chr8 (111-156)||(20973646-20973691)
chr8 (104-156)||(20839551-20839603)
chr8 (104-156)||(22063195-22063247)
chr8 (104-156)||(22744213-22744265)
chr8 (104-156)||(33089387-33089439)
chr8 (104-156)||(41009086-41009138)
chr8 (104-155)||(22178103-22178154)
chr8 (188-262)||(23652674-23652749)
chr8 (104-156)||(11392210-11392262)
chr8 (377-457)||(19989376-19989456)
chr8 (104-156)||(22025192-22025244)
chr8 (104-156)||(22050715-22050767)
chr8 (104-156)||(31412114-31412166)
chr8 (104-156)||(31418296-31418348)
chr8 (216-262)||(14594468-14594515)
chr8 (104-167)||(19987808-19987871)
chr8 (104-154)||(1264543-1264593)
chr8 (355-429)||(7301132-7301206)
chr8 (214-271)||(25624377-25624435)
chr8 (104-173)||(19860012-19860081)
chr8 (380-457)||(21861322-21861399)
chr8 (380-457)||(38185778-38185855)
chr8 (214-257)||(20973739-20973783)
[»] chr2 (41 HSPs)
chr2 (2-528)||(23375067-23375591)
chr2 (6-514)||(24160429-24160937)
chr2 (3-475)||(25651426-25651897)
chr2 (311-520)||(40261438-40261649)
chr2 (33-268)||(40261707-40261942)
chr2 (307-528)||(23085549-23085772)
chr2 (104-476)||(22841166-22841525)
chr2 (328-520)||(21903322-21903515)
chr2 (307-528)||(20353137-20353337)
chr2 (6-174)||(23085902-23086070)
chr2 (1-156)||(24669338-24669493)
chr2 (363-514)||(22109588-22109740)
chr2 (198-272)||(23085824-23085899)
chr2 (104-156)||(19035991-19036043)
chr2 (104-156)||(21121238-21121290)
chr2 (104-156)||(23149118-23149170)
chr2 (104-156)||(23560908-23560960)
chr2 (104-156)||(25267712-25267764)
chr2 (104-153)||(23291437-23291486)
chr2 (104-156)||(17634402-17634454)
chr2 (104-156)||(23753299-23753351)
chr2 (104-156)||(25174379-25174431)
chr2 (104-156)||(25365537-25365589)
chr2 (382-525)||(10039933-10040075)
chr2 (109-156)||(32911100-32911147)
chr2 (104-154)||(24943888-24943938)
chr2 (104-153)||(20913949-20913998)
chr2 (6-63)||(22790644-22790701)
chr2 (104-153)||(24652828-24652877)
chr2 (104-156)||(2106082-2106134)
chr2 (104-156)||(8889583-8889635)
chr2 (104-156)||(20648584-20648636)
chr2 (104-156)||(20724521-20724573)
chr2 (104-156)||(24659269-24659321)
chr2 (104-156)||(25107083-25107135)
chr2 (104-156)||(19703097-19703149)
chr2 (104-156)||(22810385-22810437)
chr2 (105-156)||(14564302-14564353)
chr2 (104-156)||(19649159-19649211)
chr2 (104-156)||(27272625-27272677)
chr2 (133-173)||(28970910-28970950)
[»] chr1 (53 HSPs)
chr1 (2-518)||(28204105-28204620)
chr1 (2-528)||(20901280-20901807)
chr1 (6-125)||(14800939-14801058)
chr1 (6-125)||(14809813-14809932)
chr1 (3-268)||(21527161-21527416)
chr1 (380-528)||(21117996-21118143)
chr1 (104-268)||(8683472-8683627)
chr1 (3-176)||(8685740-8685914)
chr1 (104-156)||(21734035-21734087)
chr1 (4-257)||(25091798-25092042)
chr1 (1-156)||(24475850-24476005)
chr1 (104-156)||(15316120-15316172)
chr1 (104-156)||(21410292-21410344)
chr1 (114-173)||(3706393-3706452)
chr1 (104-166)||(23631456-23631518)
chr1 (104-153)||(41312659-41312708)
chr1 (104-156)||(5381139-5381191)
chr1 (104-156)||(19853530-19853582)
chr1 (104-156)||(19859665-19859717)
chr1 (104-156)||(21732984-21733036)
chr1 (104-156)||(21986517-21986569)
chr1 (104-156)||(22434570-22434622)
chr1 (104-156)||(23712704-23712756)
chr1 (104-156)||(24238023-24238075)
chr1 (104-167)||(20837818-20837881)
chr1 (105-156)||(21745217-21745268)
chr1 (107-156)||(31926933-31926982)
chr1 (104-156)||(954705-954757)
chr1 (104-156)||(19666345-19666397)
chr1 (104-156)||(20595728-20595780)
chr1 (104-156)||(20849535-20849587)
chr1 (104-152)||(21698609-21698657)
chr1 (109-156)||(16883173-16883220)
chr1 (104-173)||(20941474-20941543)
chr1 (187-271)||(21986591-21986675)
chr1 (368-525)||(24960158-24960313)
chr1 (104-156)||(20243051-20243103)
chr1 (104-156)||(21664674-21664726)
chr1 (104-156)||(30491054-30491106)
chr1 (104-156)||(36917589-36917641)
chr1 (114-173)||(20823989-20824048)
chr1 (109-156)||(29554069-29554116)
chr1 (104-155)||(29601881-29601932)
chr1 (113-156)||(43088851-43088894)
chr1 (104-142)||(19336297-19336335)
chr1 (106-156)||(36615395-36615445)
chr1 (198-262)||(19853444-19853509)
chr1 (198-262)||(19859579-19859644)
chr1 (219-262)||(11140722-11140766)
chr1 (187-262)||(20086171-20086246)
chr1 (104-156)||(21921270-21921322)
chr1 (104-156)||(24108626-24108678)
chr1 (104-156)||(49328504-49328556)
[»] chr4 (47 HSPs)
chr4 (2-528)||(33661949-33662475)
chr4 (6-530)||(16371104-16371628)
chr4 (1-279)||(8710945-8711223)
chr4 (2-528)||(13877927-13878454)
chr4 (6-500)||(15416262-15416754)
chr4 (2-528)||(13881555-13882059)
chr4 (2-174)||(21189341-21189513)
chr4 (3-176)||(15075857-15076031)
chr4 (104-524)||(32489926-32490335)
chr4 (453-528)||(21189933-21190008)
chr4 (104-156)||(18165901-18165953)
chr4 (104-156)||(30239581-30239633)
chr4 (104-157)||(14555698-14555751)
chr4 (104-156)||(15004728-15004780)
chr4 (104-156)||(15360438-15360490)
chr4 (104-156)||(16228735-16228787)
chr4 (104-156)||(16485153-16485205)
chr4 (104-156)||(17176875-17176927)
chr4 (104-156)||(18261810-18261862)
chr4 (104-156)||(18271775-18271827)
chr4 (104-156)||(41528700-41528752)
chr4 (104-156)||(53904961-53905013)
chr4 (104-158)||(10972550-10972604)
chr4 (67-165)||(15318458-15318556)
chr4 (109-167)||(23122104-23122162)
chr4 (104-173)||(20940759-20940828)
chr4 (104-156)||(11170856-11170908)
chr4 (104-156)||(14821866-14821918)
chr4 (3-139)||(15069295-15069431)
chr4 (104-156)||(15547068-15547120)
chr4 (104-156)||(19127951-19128003)
chr4 (104-158)||(10783899-10783953)
chr4 (319-516)||(15318162-15318356)
chr4 (364-430)||(27849267-27849333)
chr4 (104-173)||(1650673-1650742)
chr4 (188-236)||(14158177-14158225)
chr4 (104-156)||(49051469-49051521)
chr4 (188-235)||(14164862-14164909)
chr4 (121-156)||(43284530-43284565)
chr4 (104-156)||(2972341-2972393)
chr4 (104-156)||(13454239-13454291)
chr4 (211-262)||(14484837-14484889)
chr4 (104-156)||(14487104-14487155)
chr4 (104-156)||(15325383-15325434)
chr4 (104-156)||(16999776-16999828)
chr4 (104-156)||(46044478-46044530)
chr4 (104-156)||(47870647-47870699)
[»] scaffold0034 (3 HSPs)
scaffold0034 (2-528)||(34284-34808)
scaffold0034 (104-156)||(45-97)
scaffold0034 (104-154)||(6204-6254)
[»] chr5 (42 HSPs)
chr5 (6-528)||(21980407-21980946)
chr5 (3-520)||(7785337-7785853)
chr5 (307-528)||(21559137-21559353)
chr5 (6-177)||(21553773-21553944)
chr5 (104-268)||(26706788-26706943)
chr5 (104-268)||(26976522-26976677)
chr5 (102-166)||(15193613-15193677)
chr5 (104-156)||(18819417-18819469)
chr5 (104-156)||(21901476-21901528)
chr5 (104-173)||(22232334-22232403)
chr5 (104-173)||(22237487-22237556)
chr5 (104-156)||(427699-427751)
chr5 (109-173)||(757917-757981)
chr5 (104-156)||(21495375-21495427)
chr5 (104-156)||(21889064-21889116)
chr5 (104-156)||(23443797-23443849)
chr5 (186-268)||(21559001-21559083)
chr5 (105-156)||(23561209-23561260)
chr5 (106-156)||(20843544-20843594)
chr5 (84-158)||(22500166-22500240)
chr5 (104-156)||(17022394-17022446)
chr5 (104-156)||(21830015-21830067)
chr5 (104-156)||(22379954-22380006)
chr5 (107-155)||(25014066-25014114)
chr5 (378-453)||(26753854-26753929)
chr5 (104-156)||(6404113-6404165)
chr5 (104-158)||(27635489-27635543)
chr5 (469-518)||(27869566-27869616)
chr5 (104-156)||(10035625-10035678)
chr5 (104-153)||(20938112-20938161)
chr5 (216-262)||(10035528-10035575)
chr5 (113-156)||(19801540-19801583)
chr5 (104-165)||(20990763-20990824)
chr5 (442-520)||(21624770-21624850)
chr5 (218-262)||(21888967-21889012)
chr5 (104-156)||(5337989-5338041)
chr5 (187-262)||(21901550-21901625)
chr5 (124-156)||(22312462-22312494)
chr5 (104-156)||(23075927-23075979)
chr5 (104-156)||(24058066-24058118)
chr5 (104-156)||(25420292-25420344)
chr5 (104-156)||(39608508-39608560)
[»] scaffold0388 (1 HSPs)
scaffold0388 (6-514)||(15488-15996)
[»] scaffold0556 (2 HSPs)
scaffold0556 (77-528)||(9803-10253)
scaffold0556 (104-156)||(4622-4674)
[»] scaffold0090 (1 HSPs)
scaffold0090 (3-506)||(31810-32316)
[»] chr6 (46 HSPs)
chr6 (6-528)||(17526456-17526977)
chr6 (2-528)||(23620603-23621129)
chr6 (106-439)||(9185447-9185766)
chr6 (442-528)||(1584427-1584513)
chr6 (328-513)||(1590337-1590525)
chr6 (3-156)||(18138068-18138221)
chr6 (442-528)||(1639268-1639354)
chr6 (104-156)||(19468333-19468385)
chr6 (114-173)||(1593249-1593308)
chr6 (104-153)||(19819409-19819458)
chr6 (104-156)||(14615899-14615951)
chr6 (104-156)||(19451784-19451836)
chr6 (104-156)||(22798135-22798187)
chr6 (104-156)||(23105702-23105754)
chr6 (104-159)||(18786579-18786634)
chr6 (114-173)||(21724377-21724436)
chr6 (105-156)||(24721108-24721159)
chr6 (105-158)||(17414503-17414556)
chr6 (67-156)||(21476796-21476885)
chr6 (368-457)||(22346892-22346981)
chr6 (377-457)||(17026988-17027068)
chr6 (104-156)||(18315593-18315645)
chr6 (104-156)||(19588198-19588250)
chr6 (104-156)||(22907469-22907521)
chr6 (104-156)||(26418278-26418330)
chr6 (109-156)||(14374942-14374989)
chr6 (109-156)||(23233035-23233082)
chr6 (188-257)||(18315667-18315737)
chr6 (104-156)||(933903-933955)
chr6 (104-156)||(13940905-13940956)
chr6 (104-156)||(19727121-19727173)
chr6 (104-156)||(21470295-21470347)
chr6 (104-156)||(23234542-23234594)
chr6 (104-156)||(27767832-27767884)
chr6 (110-153)||(2708882-2708925)
chr6 (368-417)||(1584517-1584566)
chr6 (368-417)||(1639358-1639407)
chr6 (187-236)||(21470225-21470274)
chr6 (67-156)||(25773183-25773271)
chr6 (104-173)||(28289814-28289882)
chr6 (104-141)||(28359463-28359500)
chr6 (77-125)||(1584793-1584841)
chr6 (104-156)||(12446827-12446879)
chr6 (104-156)||(13127907-13127959)
chr6 (370-434)||(14724683-14724747)
chr6 (104-156)||(17207369-17207421)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-272)||(204727-204998)
scaffold0004 (3-262)||(384581-384830)
scaffold0004 (104-156)||(327260-327312)
scaffold0004 (104-156)||(321572-321624)
[»] scaffold0500 (1 HSPs)
scaffold0500 (2-528)||(11088-11614)
[»] scaffold0364 (1 HSPs)
scaffold0364 (288-514)||(7270-7498)
[»] scaffold0014 (1 HSPs)
scaffold0014 (6-528)||(188899-189421)
[»] scaffold0016 (1 HSPs)
scaffold0016 (67-500)||(182487-182919)
[»] scaffold0860 (1 HSPs)
scaffold0860 (6-379)||(565-938)
[»] scaffold0058 (3 HSPs)
scaffold0058 (1-166)||(67692-67857)
scaffold0058 (214-284)||(67596-67666)
scaffold0058 (104-173)||(17973-18042)
[»] scaffold0381 (1 HSPs)
scaffold0381 (88-528)||(13471-13912)
[»] scaffold0130 (1 HSPs)
scaffold0130 (3-528)||(2221-2746)
[»] scaffold0609 (1 HSPs)
scaffold0609 (6-377)||(4771-5142)
[»] chr3 (54 HSPs)
chr3 (1-225)||(30205988-30206212)
chr3 (6-212)||(11325409-11325615)
chr3 (7-524)||(15232352-15232860)
chr3 (7-524)||(15238220-15238728)
chr3 (419-528)||(13836629-13836738)
chr3 (104-156)||(24284046-24284098)
chr3 (104-166)||(15954578-15954640)
chr3 (104-156)||(12153363-12153415)
chr3 (104-156)||(12363881-12363933)
chr3 (104-152)||(13036600-13036648)
chr3 (104-156)||(15011535-15011587)
chr3 (104-156)||(16823426-16823478)
chr3 (104-156)||(17496634-17496686)
chr3 (104-156)||(42109693-42109745)
chr3 (3-165)||(12855374-12855536)
chr3 (104-173)||(10597296-10597365)
chr3 (104-156)||(2269877-2269929)
chr3 (104-156)||(11305386-11305438)
chr3 (104-156)||(11644433-11644485)
chr3 (104-156)||(11939528-11939580)
chr3 (104-156)||(12355598-12355650)
chr3 (104-156)||(12362147-12362199)
chr3 (104-156)||(13692436-13692488)
chr3 (104-156)||(18128186-18128238)
chr3 (105-156)||(15934574-15934625)
chr3 (104-154)||(14288656-14288706)
chr3 (104-158)||(17198665-17198719)
chr3 (104-173)||(16829586-16829655)
chr3 (104-173)||(16838109-16838178)
chr3 (104-156)||(11964554-11964606)
chr3 (104-156)||(12479322-12479374)
chr3 (104-156)||(14293218-14293270)
chr3 (104-156)||(14298845-14298897)
chr3 (112-156)||(15518971-15519015)
chr3 (104-156)||(18135956-18136008)
chr3 (104-156)||(18718763-18718815)
chr3 (105-156)||(12274764-12274815)
chr3 (110-156)||(12202791-12202837)
chr3 (319-381)||(30206285-30206347)
chr3 (111-156)||(12961024-12961069)
chr3 (104-156)||(12255633-12255685)
chr3 (104-156)||(12256078-12256130)
chr3 (104-156)||(14652357-14652409)
chr3 (104-156)||(18961416-18961468)
chr3 (104-156)||(35985195-35985247)
chr3 (104-156)||(49163622-49163674)
chr3 (186-271)||(15011608-15011693)
chr3 (104-166)||(16349079-16349140)
chr3 (104-154)||(20376883-20376933)
chr3 (447-500)||(10200-10253)
chr3 (104-173)||(16382523-16382591)
chr3 (104-152)||(12419919-12419967)
chr3 (104-156)||(15375100-15375152)
chr3 (104-156)||(46070752-46070804)
[»] scaffold0371 (3 HSPs)
scaffold0371 (6-272)||(7925-8192)
scaffold0371 (307-528)||(5523-5746)
scaffold0371 (33-166)||(6549-6682)
[»] scaffold0234 (1 HSPs)
scaffold0234 (6-280)||(26346-26599)
[»] scaffold0009 (1 HSPs)
scaffold0009 (118-284)||(159580-159746)
[»] scaffold0149 (1 HSPs)
scaffold0149 (307-528)||(27729-27952)
[»] scaffold0485 (1 HSPs)
scaffold0485 (104-518)||(2924-3328)
[»] scaffold0117 (1 HSPs)
scaffold0117 (328-528)||(33833-34035)
[»] scaffold0069 (3 HSPs)
scaffold0069 (3-439)||(34759-35182)
scaffold0069 (3-174)||(29758-29930)
scaffold0069 (189-439)||(29518-29764)
[»] scaffold0011 (8 HSPs)
scaffold0011 (104-439)||(21279-21601)
scaffold0011 (104-156)||(56392-56444)
scaffold0011 (104-156)||(147453-147505)
scaffold0011 (104-156)||(154640-154692)
scaffold0011 (104-156)||(252393-252445)
scaffold0011 (104-156)||(258999-259051)
scaffold0011 (104-155)||(187452-187503)
scaffold0011 (104-155)||(197079-197130)
[»] scaffold0028 (2 HSPs)
scaffold0028 (168-284)||(88168-88284)
scaffold0028 (104-156)||(92215-92267)
[»] scaffold0696 (1 HSPs)
scaffold0696 (3-176)||(3045-3219)
[»] scaffold0126 (2 HSPs)
scaffold0126 (460-528)||(5923-5991)
scaffold0126 (104-173)||(44683-44752)
[»] scaffold0001 (3 HSPs)
scaffold0001 (33-156)||(449214-449337)
scaffold0001 (104-154)||(96358-96408)
scaffold0001 (113-156)||(179463-179506)
[»] scaffold1765 (1 HSPs)
scaffold1765 (3-156)||(50-203)
[»] scaffold0480 (1 HSPs)
scaffold0480 (3-156)||(989-1142)
[»] scaffold0395 (2 HSPs)
scaffold0395 (3-176)||(6955-7128)
scaffold0395 (368-457)||(1999-2089)
[»] scaffold0180 (1 HSPs)
scaffold0180 (104-156)||(12935-12987)
[»] scaffold0005 (3 HSPs)
scaffold0005 (114-173)||(259171-259230)
scaffold0005 (114-173)||(265586-265645)
scaffold0005 (104-156)||(17791-17843)
[»] scaffold2016 (1 HSPs)
scaffold2016 (104-166)||(479-541)
[»] scaffold0298 (2 HSPs)
scaffold0298 (102-156)||(8750-8804)
scaffold0298 (102-156)||(18834-18888)
[»] scaffold0008 (2 HSPs)
scaffold0008 (104-166)||(124544-124606)
scaffold0008 (104-158)||(35285-35339)
[»] scaffold0585 (1 HSPs)
scaffold0585 (3-429)||(8000-8414)
[»] scaffold1853 (1 HSPs)
scaffold1853 (104-156)||(468-520)
[»] scaffold0751 (1 HSPs)
scaffold0751 (104-156)||(913-965)
[»] scaffold0661 (1 HSPs)
scaffold0661 (104-156)||(3680-3732)
[»] scaffold0331 (1 HSPs)
scaffold0331 (104-156)||(19005-19057)
[»] scaffold0301 (2 HSPs)
scaffold0301 (104-156)||(3718-3770)
scaffold0301 (109-156)||(13036-13083)
[»] scaffold0244 (4 HSPs)
scaffold0244 (104-156)||(14110-14162)
scaffold0244 (104-156)||(300-352)
scaffold0244 (198-262)||(202-267)
scaffold0244 (198-262)||(14012-14077)
[»] scaffold0139 (2 HSPs)
scaffold0139 (104-156)||(26387-26439)
scaffold0139 (104-156)||(2538-2590)
[»] scaffold0108 (1 HSPs)
scaffold0108 (104-156)||(46013-46065)
[»] scaffold0091 (4 HSPs)
scaffold0091 (104-156)||(22362-22414)
scaffold0091 (104-156)||(26559-26611)
scaffold0091 (214-257)||(22462-22506)
scaffold0091 (214-257)||(26659-26703)
[»] scaffold0054 (3 HSPs)
scaffold0054 (104-156)||(61633-61685)
scaffold0054 (105-156)||(60070-60121)
scaffold0054 (216-257)||(61735-61777)
[»] scaffold0039 (1 HSPs)
scaffold0039 (104-156)||(3400-3452)
[»] scaffold0035 (2 HSPs)
scaffold0035 (104-156)||(1041-1093)
scaffold0035 (104-156)||(10952-11003)
[»] scaffold0434 (1 HSPs)
scaffold0434 (105-156)||(968-1019)
[»] scaffold0156 (1 HSPs)
scaffold0156 (105-156)||(26096-26147)
[»] scaffold0021 (1 HSPs)
scaffold0021 (114-173)||(141823-141882)
[»] scaffold0664 (1 HSPs)
scaffold0664 (104-158)||(2637-2691)
[»] scaffold0326 (2 HSPs)
scaffold0326 (106-156)||(5008-5058)
scaffold0326 (216-262)||(5108-5155)
[»] scaffold0081 (1 HSPs)
scaffold0081 (106-156)||(55562-55612)
[»] scaffold0053 (2 HSPs)
scaffold0053 (106-156)||(72518-72568)
scaffold0053 (216-271)||(46443-46499)
[»] scaffold0003 (3 HSPs)
scaffold0003 (34-156)||(80713-80835)
scaffold0003 (104-156)||(98090-98142)
scaffold0003 (104-156)||(161128-161180)
[»] scaffold0025 (2 HSPs)
scaffold0025 (104-173)||(71580-71649)
scaffold0025 (105-156)||(77228-77279)
[»] scaffold1336 (1 HSPs)
scaffold1336 (104-156)||(371-423)
[»] scaffold0790 (1 HSPs)
scaffold0790 (104-156)||(4978-5030)
[»] scaffold0706 (1 HSPs)
scaffold0706 (104-156)||(2965-3017)
[»] scaffold0462 (1 HSPs)
scaffold0462 (104-156)||(8846-8898)
[»] scaffold0405 (2 HSPs)
scaffold0405 (104-156)||(2930-2982)
scaffold0405 (104-156)||(11632-11684)
[»] scaffold0266 (2 HSPs)
scaffold0266 (104-156)||(2424-2476)
scaffold0266 (104-156)||(23503-23555)
[»] scaffold0253 (1 HSPs)
scaffold0253 (104-156)||(5770-5822)
[»] scaffold0207 (1 HSPs)
scaffold0207 (4-156)||(9176-9328)
[»] scaffold0205 (1 HSPs)
scaffold0205 (104-156)||(27748-27800)
[»] scaffold0201 (1 HSPs)
scaffold0201 (104-156)||(26805-26857)
[»] scaffold0192 (3 HSPs)
scaffold0192 (4-156)||(21351-21503)
scaffold0192 (104-156)||(32018-32070)
scaffold0192 (110-156)||(7099-7145)
[»] scaffold0190 (1 HSPs)
scaffold0190 (104-156)||(19755-19807)
[»] scaffold0173 (1 HSPs)
scaffold0173 (104-156)||(1851-1903)
[»] scaffold0167 (1 HSPs)
scaffold0167 (104-156)||(7427-7479)
[»] scaffold0124 (2 HSPs)
scaffold0124 (104-156)||(9738-9790)
scaffold0124 (104-156)||(45409-45461)
[»] scaffold0121 (1 HSPs)
scaffold0121 (104-156)||(9751-9803)
[»] scaffold0114 (2 HSPs)
scaffold0114 (104-156)||(47477-47529)
scaffold0114 (104-156)||(42438-42490)
[»] scaffold0102 (3 HSPs)
scaffold0102 (104-156)||(30317-30369)
scaffold0102 (104-156)||(38911-38963)
scaffold0102 (104-156)||(44982-45034)
[»] scaffold0096 (1 HSPs)
scaffold0096 (104-156)||(3382-3434)
[»] scaffold0017 (1 HSPs)
scaffold0017 (104-156)||(2581-2633)
[»] scaffold0007 (1 HSPs)
scaffold0007 (104-156)||(207348-207400)
[»] scaffold0924 (1 HSPs)
scaffold0924 (33-156)||(2749-2872)
[»] scaffold0635 (1 HSPs)
scaffold0635 (382-525)||(6995-7137)
[»] scaffold0586 (1 HSPs)
scaffold0586 (469-528)||(1725-1784)
[»] scaffold0023 (2 HSPs)
scaffold0023 (109-156)||(152973-153020)
scaffold0023 (104-156)||(20125-20177)
[»] scaffold1290 (1 HSPs)
scaffold1290 (104-154)||(885-935)
[»] scaffold0923 (1 HSPs)
scaffold0923 (106-156)||(334-384)
[»] scaffold0420 (1 HSPs)
scaffold0420 (375-453)||(4558-4636)
[»] scaffold0377 (2 HSPs)
scaffold0377 (104-157)||(3699-3752)
scaffold0377 (104-157)||(7738-7791)
[»] scaffold0342 (1 HSPs)
scaffold0342 (104-173)||(16496-16565)
[»] scaffold0026 (2 HSPs)
scaffold0026 (104-153)||(143174-143223)
scaffold0026 (104-156)||(62831-62883)
[»] scaffold0015 (1 HSPs)
scaffold0015 (111-156)||(171435-171480)
[»] scaffold0555 (1 HSPs)
scaffold0555 (104-148)||(1894-1938)
[»] scaffold0516 (1 HSPs)
scaffold0516 (104-156)||(6658-6710)
[»] scaffold0334 (1 HSPs)
scaffold0334 (104-156)||(8956-9008)
[»] scaffold0322 (1 HSPs)
scaffold0322 (377-457)||(19575-19655)
[»] scaffold0261 (1 HSPs)
scaffold0261 (104-152)||(8893-8941)
[»] scaffold0243 (1 HSPs)
scaffold0243 (104-156)||(11950-12002)
[»] scaffold0239 (1 HSPs)
scaffold0239 (104-156)||(14106-14158)
[»] scaffold0178 (1 HSPs)
scaffold0178 (104-156)||(25942-25994)
[»] scaffold0120 (1 HSPs)
scaffold0120 (104-156)||(4678-4730)
[»] scaffold0106 (3 HSPs)
scaffold0106 (104-156)||(46376-46428)
scaffold0106 (104-156)||(50649-50701)
scaffold0106 (375-441)||(36481-36547)
[»] scaffold0097 (1 HSPs)
scaffold0097 (104-156)||(28350-28402)
[»] scaffold0078 (1 HSPs)
scaffold0078 (104-156)||(17053-17105)
[»] scaffold0074 (1 HSPs)
scaffold0074 (104-156)||(20680-20732)
[»] scaffold0072 (1 HSPs)
scaffold0072 (104-156)||(56371-56423)
[»] scaffold0071 (1 HSPs)
scaffold0071 (104-156)||(50579-50631)
[»] scaffold0022 (2 HSPs)
scaffold0022 (104-156)||(38284-38336)
scaffold0022 (104-156)||(136344-136396)
[»] scaffold0010 (2 HSPs)
scaffold0010 (109-156)||(43738-43785)
scaffold0010 (109-156)||(48804-48851)
[»] scaffold0430 (1 HSPs)
scaffold0430 (115-173)||(14192-14250)
[»] scaffold0076 (1 HSPs)
scaffold0076 (104-173)||(51316-51386)
[»] scaffold0669 (1 HSPs)
scaffold0669 (42-155)||(1273-1386)
[»] scaffold0575 (1 HSPs)
scaffold0575 (380-525)||(8805-8949)
[»] scaffold0335 (1 HSPs)
scaffold0335 (368-457)||(8223-8312)
[»] scaffold0211 (1 HSPs)
scaffold0211 (107-156)||(9842-9891)
[»] scaffold0104 (1 HSPs)
scaffold0104 (104-156)||(41274-41327)
[»] scaffold0089 (1 HSPs)
scaffold0089 (380-457)||(2223-2300)
[»] scaffold0065 (1 HSPs)
scaffold0065 (104-173)||(27383-27452)
[»] scaffold1584 (1 HSPs)
scaffold1584 (104-156)||(830-882)
[»] scaffold0574 (1 HSPs)
scaffold0574 (104-156)||(5518-5570)
[»] scaffold0348 (1 HSPs)
scaffold0348 (104-156)||(15122-15174)
[»] scaffold0220 (1 HSPs)
scaffold0220 (104-156)||(10868-10920)
[»] scaffold0049 (2 HSPs)
scaffold0049 (104-156)||(42551-42603)
scaffold0049 (104-156)||(53246-53298)
[»] scaffold0002 (1 HSPs)
scaffold0002 (104-156)||(370885-370937)
[»] scaffold0063 (2 HSPs)
scaffold0063 (105-156)||(24726-24777)
scaffold0063 (106-156)||(14525-14575)
[»] scaffold0402 (1 HSPs)
scaffold0402 (104-142)||(15456-15494)
[»] scaffold0057 (1 HSPs)
scaffold0057 (375-457)||(1792-1873)
[»] scaffold0037 (1 HSPs)
scaffold0037 (104-154)||(101300-101350)
[»] scaffold0947 (1 HSPs)
scaffold0947 (104-145)||(3787-3828)
[»] scaffold0672 (1 HSPs)
scaffold0672 (380-457)||(8258-8335)
[»] scaffold0323 (1 HSPs)
scaffold0323 (104-173)||(7740-7809)
[»] scaffold0297 (1 HSPs)
scaffold0297 (104-156)||(1386-1438)
[»] scaffold0249 (1 HSPs)
scaffold0249 (104-156)||(6397-6449)
[»] scaffold0158 (1 HSPs)
scaffold0158 (104-156)||(14904-14956)
[»] scaffold0060 (1 HSPs)
scaffold0060 (104-156)||(41703-41755)


Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 1 - 528
Target Start/End: Original strand, 13849285 - 13849812
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  | ||| | |||||||||  ||||| ||||||||||||| | |    
T  13849285 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctggatgtttatggagaggactggttaagtttttagatcaaaaagagga 13849384  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  13849385 ttagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactctcgagagcagcaattttctgctcgccacggcgaacgacttactcgccatagcg 13849484  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggtt 300  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  13849485 agtagcccatttcattgagctcgccatagcgagcagtgcactcgcctggcgagttgcacagtggctgaagccgtatttgtgttttacgtactgttgggtt 13849584  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13849585 ggattctttgggtagaacaaataattatgataaattatgttattttactagagctgttgatttgaatatgattgattgttgaatgctgatttatgcataa 13849684  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  13849685 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcacgagttgaccatgttgaggtgtaaggcatatttaaatatgca 13849784  T
Q  501 ttgttgagtagtagttgttgatgtccat 528  Q
    |||||||||||||||||| | |||||||    
T  13849785 ttgttgagtagtagttgtcgttgtccat 13849812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 1 - 528
Target Start/End: Complemental strand, 16573918 - 16573391
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  | ||| | ||||||||| |||||| |||||| |||||| | |    
T  16573918 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctggatgtttatggagaggactggtcaagtttttagataaaaaagagga 16573819  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||  ||| || |||||||| ||||||    
T  16573818 ttagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactcccgagagcaacaattttctactcgccacgacgaatgacttactcgccatagcg 16573719  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| || |||||||||||||||||| ||||    
T  16573718 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcctggcgagttgcacaggcgctgaagccgtatttgtgttttacgtactgttcggtt 16573619  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||  ||| |||||| |||||||| |||||||||||| || |||| ||||| |||    
T  16573618 ggattctttgggtagaacaaataattatgataaattatgttattttactagagttgttgacttgaatataattgattgttgaatgttgatctatgcgtaa 16573519  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 500  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||    
T  16573518 ttgcatataaatagaatatacaagttgttggattccattgtcaaaagttgttgcgtcacgagttgaccatgttgaggtgtaagacatatttaaatatgca 16573419  T
Q  501 ttgttgagtagtagttgttgatgtccat 528  Q
     ||||||||||||||||| | |||||||    
T  16573418 ctgttgagtagtagttgtcgttgtccat 16573391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 1 - 528
Target Start/End: Original strand, 16591744 - 16592271
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  | ||| | ||||||||| |||||| |||||| |||||| | |    
T  16591744 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctggatgtttatggagaggactggtcaagtttttagataaaaaagagga 16591843  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||  ||| || |||||||| ||||||    
T  16591844 ttagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactcccgagagcaacaattttctactcgccacgacgaatgacttactcgccatagcg 16591943  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| || |||||||||||||||||| ||||    
T  16591944 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcctggcgagttgcacaggcgctgaagccgtatttgtgttttacgtactgttcggtt 16592043  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||  ||| |||||| |||||||| |||||||||||| || |||| ||||| |||    
T  16592044 ggattctttgggtagaacaaataattatgataaattatgttattttactagagttgttgacttgaatataattgattgttgaatgttgatctatgcgtaa 16592143  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 500  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||    
T  16592144 ttgcatataaatagaatatacaagttgttggattccattgtcaaaagttgttgcgtcacgagttgaccatgttgaggtgtaagacatatttaaatatgca 16592243  T
Q  501 ttgttgagtagtagttgttgatgtccat 528  Q
     ||||||||||||||||| | |||||||    
T  16592244 ctgttgagtagtagttgtcgttgtccat 16592271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 528
Target Start/End: Complemental strand, 7529797 - 7529275
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| || | |||  ||||||| ||||||||||| || |  | | ||| |||||||||||||||| ||||||||||||| | ||| ||    
T  7529797 ttttcaaaatgttgttatatgacgtgagttggatggttttgagtgcttggatgtttttagagaggactgggcaagtttttagatcaaaaagaggattagg 7529698  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||| || |||||||||||||||| ||||| | |||||||| |||||||||||    
T  7529697 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagcaccatttttctgctcgccacgctgaacaacttactcgccatagcgagtag 7529598  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttacgtactgttgggttggat 304  Q
    ||| ||| ||  |||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| || || |||||  ||||||||||| ||||     
T  7529597 ccctttttctgaagctcgccatagcgagcagtgcactcgcctggcgagttgcacaatggctgagagccgtatttgcgttttgtgtactgttgggctggaa 7529498  T
Q  305 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 404  Q
    || ||||||| | ||||||||| ||||||||||| |||||||| | ||| || |||||||||||| | |||||||||||||  |||||||| ||||||||    
T  7529497 tc-ttgggtatattaaataattctgattaattatattattttatcagagttgctgatttgaatataaatgattgttgattgtggatttatgtataattgc 7529399  T
Q  405 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 504  Q
    || |||||| | |||||||||||||| ||||||||||| || |||||||||| || ||||||||||||||| ||||||   ||||||| ||||||| |||    
T  7529398 atgtaaataaattatacaagttgttgaattccattgtcgaaggttgttgtgttgctagttgaccatgttgatgtgtaaatcatatttatatatgcactgt 7529299  T
Q  505 tgagtagtagttgttgatgtccat 528  Q
    || ||||||| ||| | |||||||    
T  7529298 tgtgtagtagatgtcgttgtccat 7529275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 6 - 500
Target Start/End: Original strand, 39995221 - 39995714
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||||||||||||||| ||||  ||  ||||||| ||||||| |||||| |  | | ||| |||||||| |||| || |||||| ||||||   ||| ||    
T  39995221 tttttaaaatgttgttataggatgtgagttggatggttttgactgcctggatgtttctagagaggactgagcaaatttttagataaaaaagatgattagg 39995320  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagca-attttctgctcgccacggtgaacgaattactcgctatagcgagta 204  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||  |  |||||||||||| |||| |||| | |||||||| | ||||||||    
T  39995321 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcactattttttctgctcgcgacggcgaacaacttactcgccagagcgagta 39995420  T
Q  205 gcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttacgtactgttgggttgga 303  Q
    ||||||||  |||||||||||||||||||||| |||||  |   ||||||||| ||||||||||  ||||||| ||  ||| | |||||||| || ||||    
T  39995421 gcccattttattgagctcgccatagcgagcagagcactaaccccgcgagttgctcagtggctgagggccgcatttgcatttga-gtactgttaggctgga 39995519  T
Q  304 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattg 403  Q
     || ||||||| | ||||||||  ||||||||||  |||  ||| | ||| || |||||||||||||| ||||| |||||||  |||||||| ||| |||    
T  39995520 atc-ttgggtatattaaataatcctgattaattacatta-cttatcagagttgctgatttgaatatgaatgattattgattgtggatttatgtatatttg 39995617  T
Q  404 catttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 500  Q
     || |||||| | |||||||||||||| |||  |||||| || |||||||||||    || ||||||||||| |||||||  ||||||| |||||||    
T  39995618 tatgtaaataaattatacaagttgttgaattatattgtcgaaggttgttgtgtcattggtcgaccatgttgatgtgtaagtcatatttatatatgca 39995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 307 - 528
Target Start/End: Original strand, 7507205 - 7507427
Alignment:
Q  307 tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca 405  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||| ||||| |||  ||||||||    
T  7507205 tttgggtagaataaataattatgattaattatgttatttttaccagagctgttgatttgaatatgatggattgttgattgttgattcatgtgtaattgca 7507304  T
Q  406 tttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgtt 505  Q
    |||||||| ||| |||||  | ||| || ||||||||||||||| ||||||| | |||||| ||||||||||||||||  ||||||||||||||| ||||    
T  7507305 tttaaataaaatgtacaaagtattgaatgccattgtcaaaagtttttgtgtcacaagttgatcatgttgaggtgtaagtcatatttaaatatgcactgtt 7507404  T
Q  506 gagtagtagttgttgatgtccat 528  Q
    |  |||||| ||||| |||||||    
T  7507405 gtatagtagatgttgttgtccat 7507427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 104 - 518
Target Start/End: Complemental strand, 15690508 - 15690106
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| || ||||| |||||||||||          ||||||| ||||||||    
T  15690508 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagcaccatttttcctgctcgccacg----------tactcgccatagcgag 15690419  T
Q  203 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgtt-ttacgtactgttgggtt 300  Q
    || | |||||| ||||| |||||||||||||||| |||||||||| |||||||||| ||||  |||||||||  ||| |||  ||  ||| |||||| ||    
T  15690418 taactcatttc-ttgagttcgccatagcgagcagatgcactcgcgaggcgagttgctcagtacctgaagccgtttctatgtaattgagtattgttgg-tt 15690321  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    | ||| |||| |||| | || || |||||||||||| |||||||||||| |||||||||| || | ||||||  ||||||||||||||  ||||| |||     
T  15690320 gaatt-tttgtgtaggacaa-tagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatat 15690225  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatt--taaatatg 498  Q
    ||  ||||||||| | |||||||||||||| ||| |||| ||||| |||| ||| ||   || ||||  ||||| ||||||||  |||||  || |||||    
T  15690224 ttatatttaaataaattatacaagttgttgaatttcatt-tcaaaggttgatgtatcattagatgactctgttgtggtgtaagtcatattcatatatatg 15690126  T
Q  499 cattgttgagtagtagttgt 518  Q
    || |||||||||| ||||||    
T  15690125 cactgttgagtagcagttgt 15690106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 104 - 518
Target Start/End: Complemental strand, 15698101 - 15697699
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| || ||||| |||||||||||          ||||||| ||||||||    
T  15698101 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagcaccatttttcctgctcgccacg----------tactcgccatagcgag 15698012  T
Q  203 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgtt-ttacgtactgttgggtt 300  Q
    || | |||||| ||||| |||||||||||||||| |||||||||| |||||||||| ||||  |||||||||  ||| |||  ||  ||| |||||| ||    
T  15698011 taactcatttc-ttgagttcgccatagcgagcagatgcactcgcgaggcgagttgctcagtacctgaagccgtttctatgtaattgagtattgttgg-tt 15697914  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    | ||| |||| |||| | || || |||||||||||| |||||||||||| |||||||||| || | ||||||  ||||||||||||||  ||||| |||     
T  15697913 gaatt-tttgtgtaggacaa-tagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatat 15697818  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatt--taaatatg 498  Q
    ||  ||||||||| | |||||||||||||| ||| |||| ||||| |||| ||| ||   || ||||  ||||| ||||||||  |||||  || |||||    
T  15697817 ttatatttaaataaattatacaagttgttgaatttcatt-tcaaaggttgatgtatcattagatgactctgttgtggtgtaagtcatattcatatatatg 15697719  T
Q  499 cattgttgagtagtagttgt 518  Q
    || |||||||||| ||||||    
T  15697718 cactgttgagtagcagttgt 15697699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 268
Target Start/End: Original strand, 12201469 - 12201721
Alignment:
Q  7 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 106  Q
    ||||||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || | |||| ||||||   |||||||    
T  12201469 ttttaaattgttgttataagatgtaagttggatggttttgagtgcctggatgtttttagagaggactggggcaattttcagattaaaaagatgattgggg 12201568  T
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||          ||||||| |||||||||||    
T  12201569 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgagtag 12201658  T
Q  206 cccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 268  Q
    | ||||| |||||| ||||||||| |||| | ||||||||| | ||||||||| |||| |||||    
T  12201659 ctcattt-cttgagttcgccatagtgagcaaatgcactcgcctcgcgagttgctcagtagctga 12201721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 268
Target Start/End: Original strand, 12208074 - 12208326
Alignment:
Q  7 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 106  Q
    ||||||| ||||||| || | |||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || | |||| ||||||   ||| |||    
T  12208074 ttttaaattgttgttataagacgtaagttggatggttttgagtgcctggatgtttttagagaggactggggcaattttcagattaaaaagatgattaggg 12208173  T
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||          ||||||| |||||||||||    
T  12208174 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgagtag 12208263  T
Q  206 cccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 268  Q
    | ||||| |||||| |||||||||||||| | ||||||||| | || |||||| |||| |||||    
T  12208264 ctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcaagttgctcagtagctga 12208326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 7506913 - 7507078
Alignment:
Q  11 aaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa--ttggggag 108  Q
    ||||||| ||| |||| |||  ||||||| | |||| ||||||||| || ||| | |||||||||||||||| || ||| |||||   ||  || |||||    
T  7506913 aaaatgtcgttataggacgtgggttggatgggtttgggtgcctgaatatatatggagaggactgggcaagtttttggataaaaaacaaaagattagggag 7507012  T
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 174  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||| | |||| ||||||||||    
T  7507013 cttaaaaatgaggatttagtgtgaaaaatgtcaaaactcccgagagcaactatttcctgctcgcca 7507078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 442 - 528
Target Start/End: Original strand, 15731648 - 15731734
Alignment:
Q  442 caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    |||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||| |||||||    
T  15731648 caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgcactgttgagtagtagatgttgttgtccat 15731734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 328 - 513
Target Start/End: Complemental strand, 15725824 - 15725636
Alignment:
Q  328 tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt 426  Q
    |||||||||||||| ||| |||| ||| ||||||||||| |||| |||||| ||||||| || | |||| || |||  ||||||||| | |||| |||||    
T  15725824 tgattaattatgttgtttctaccagagttgttgatttgattatggttgattattgattgttgttctatgtatgattatatttaaataaattataaaagtt 15725725  T
Q  427 gttggattccattgt--caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagta 513  Q
    |||| ||  ||||||  |||||||||||||||| | || |||| ||||||| |||||||  ||||||||||||||| ||||| ||||||    
T  15725724 gttgaatgtcattgtaacaaaagttgttgtgtcacaagatgacaatgttgaagtgtaagtcatatttaaatatgcagtgttgtgtagta 15725636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 14039293 - 14039170
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| |||||||||||| |||  | | ||| ||||||||||  | || |||||| ||||||  |||| || ||||||||||||| ||||||| ||||    
T  14039293 gttggatagttttgagtgcccgaatgtttttagagaggactgggataatttttagattaaaaagataattaggaagcttaaaaatgaagatttagtgaga 14039194  T
Q  133 aaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||||||||||    
T  14039193 aaaatgtcaaaactcccgagagca 14039170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 14349323 - 14349200
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| |||||||||||| |||  | | ||| ||||||||||  | || |||||| ||||||  |||| || ||||||||||||| ||||||| ||||    
T  14349323 gttggatagttttgagtgcccgaatgtttttagagaggactgggataatttttagattaaaaagataattaggaagcttaaaaatgaagatttagtgaga 14349224  T
Q  133 aaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||||||||||    
T  14349223 aaaatgtcaaaactcccgagagca 14349200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 525
Target Start/End: Complemental strand, 42041711 - 42041567
Alignment:
Q  380 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtg 479  Q
    |||||| ||||||||| |||||| |||||||| | | |||||||||||||| | | ||||||| || |||||||||||   ||||||||||||||| | |    
T  42041711 tgattgttgatttatgtataattacatttaaacaaattatacaagttgttgaaattcattgtcgaaggttgttgtgtc-atagttgaccatgttgatgag 42041613  T
Q  480 taagatatatttaaatatgcattgttgagtagtagttgttgatgtc 525  Q
    ||||  ||||| | ||||||||||||| |||| |||||||| ||||    
T  42041612 taagtcatattcatatatgcattgttgtgtagcagttgttgttgtc 42041567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 15103949 - 15104007
Alignment:
Q  98 gaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15103949 gaataggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15104007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 81690 - 81742
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  81690 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 81742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12800902 - 12800954
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12800902 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12800954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16187342 - 16187394
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  16187342 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 16187394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16475749 - 16475801
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  16475749 gggagcttaaaaatgaggatttagtgagaaaaatttcaaaactcccgagagca 16475801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18009853 - 18009801
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18009853 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18009801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23442750 - 23442698
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  23442750 gggagcttaaaaatgaggatttagtgggaaaaatgtcaaaactcccgagagca 23442698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 15339379 - 15339320
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  15339379 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 15339320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 15710618 - 15710677
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  15710618 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 15710677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 16668012 - 16668127
Alignment:
Q  41 gttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtc 140  Q
    |||||||||| |||||  | | ||| ||||||||||  | || |||||| ||||||   ||| |||| ||||||||||| ||||||| ||||||||||||    
T  16668012 gttttgagtgtctgaatgtttttagagaggactgggacaatttttagattaaaaagatgattagggaacttaaaaatgaagatttagtgagaaaaatgtc 16668111  T
Q  141 aaaactcccgagagca 156  Q
    ||||||||||||||||    
T  16668112 aaaactcccgagagca 16668127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 17642382 - 17642497
Alignment:
Q  41 gttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtc 140  Q
    |||||||||| |||||  | | ||| ||||||||||  | || |||||| ||||||   ||| |||| ||||||||||| ||||||| ||||||||||||    
T  17642382 gttttgagtgtctgaatgtttttagagaggactgggacaatttttagattaaaaagatgattagggaacttaaaaatgaagatttagtgagaaaaatgtc 17642481  T
Q  141 aaaactcccgagagca 156  Q
    ||||||||||||||||    
T  17642482 aaaactcccgagagca 17642497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 46681807 - 46681858
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46681807 ggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 46681858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 14250147 - 14250209
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||||| || ||||||    
T  14250147 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagcaccatttttct 14250209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 21518787 - 21518945
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagta 204  Q
    |||||||||| ||| ||||||| |||||||||||||||||||| ||||||| || ||||| |||||||||||          ||||||| ||||||||||    
T  21518787 gagcttaaaattgaagatttagtgagaaaaatgtcaaaactcctgagagcaccatttttcttgctcgccacg----------tactcgccatagcgagta 21518876  T
Q  205 gcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccg 273  Q
     ||||||| |||||| | ||||||||||| || || ||||||| || ||||||| ||||  |||||||||    
T  21518877 acccattt-cttgagtttgccatagcgagtagatgtactcgcgaggtgagttgctcagtacctgaagccg 21518945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 12554999 - 12554950
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12554999 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 12554950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13318247 - 13318195
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  13318247 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 13318195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14169144 - 14169196
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  14169144 gggagcttcaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14169196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14173391 - 14173443
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  14173391 gggagcttcaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14173443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14581171 - 14581223
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  14581171 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactccctagagca 14581223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15097578 - 15097630
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15097578 gggagcctaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15097630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15437183 - 15437235
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  15437183 gggagcttaaaaatgaagatttagtgagaaaaatgtcagaactcccgagagca 15437235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16073583 - 16073635
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  16073583 gggagcttaaaaatgaagatttagtaagaaaaatgtcaaaactcccgagagca 16073635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 46348366 - 46348418
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46348366 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 46348418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 3328348 - 3328301
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3328348 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3328301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 12695146 - 12695099
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12695146 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12695099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 35366289 - 35366213
Alignment:
Q  353 gctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttgg 431  Q
    |||||||||| ||||||||||| ||| ||||||||| ||||||| |||||||||| || ||||||||||||| ||||||    
T  35366289 gctgttgatt-gaatatgattg-ttgatgattgctggtttatgcttaattgcattcaattagaatatacaaggtgttgg 35366213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 45185998 - 45185948
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  45185998 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 45185948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 6412391 - 6412322
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||| |||||||||  ||||||| |||||    
T  6412391 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcctgagagcagcttttttctgttcgcc 6412322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11857316 - 11857368
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||| | |||||||    
T  11857316 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttctgagagca 11857368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 13020226 - 13020182
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  13020226 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 13020182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14265615 - 14265667
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| |  |||| ||||||||||||||||||||||||||||    
T  14265615 gggagcttaaaaatgaagtattagtgagaaaaatgtcaaaactcccgagagca 14265667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15722825 - 15722877
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  15722825 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 15722877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17182324 - 17182376
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  17182324 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 17182376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19146123 - 19146071
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  19146123 gggagcttaaaaatgaagttctagtgagaaaaatgtcaaaactcccgagagca 19146071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19600412 - 19600360
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  19600412 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 19600360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20745522 - 20745470
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  20745522 gggagcttaaaaatgaagttctagtgagaaaaatgtcaaaactcccgagagca 20745470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 35962346 - 35962398
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  35962346 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 35962398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 19152476 - 19152354
Alignment:
Q  34 ttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaa 133  Q
    |||||| ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | ||||| |||||||||| | | ||| |||||    
T  19152476 ttggatagttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagtttaaaaatgaagttctagtgagaa 19152377  T
Q  134 aaatgtcaaaactcccgagagca 156  Q
    ||||||||||| |||||||||||    
T  19152376 aaatgtcaaaaatcccgagagca 19152354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 20751875 - 20751753
Alignment:
Q  34 ttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaa 133  Q
    |||||| ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | ||||| |||||||||| | | ||| |||||    
T  20751875 ttggatagttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagtttaaaaatgaagttctagtgagaa 20751776  T
Q  134 aaatgtcaaaactcccgagagca 156  Q
    ||||||||||| |||||||||||    
T  20751775 aaatgtcaaaaatcccgagagca 20751753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 11219736 - 11219781
Alignment:
Q  111 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||||    
T  11219736 taaaaatgagattttagtgagaaaaatgtcaaaactcccgagagca 11219781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14281266 - 14281318
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||  ||||||||||||||||||||||||||||    
T  14281266 gggagcttagaattgatgatttaatgagaaaaatgtcaaaactcccgagagca 14281318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 15085552 - 15085587
Alignment:
Q  123 tttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    ||||| ||||||||||||||||||||||||||||||    
T  15085552 tttagtgagaaaaatgtcaaaactcccgagagcagc 15085587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 18009751 - 18009704
Alignment:
Q  216 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  18009751 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 18009704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 10520366 - 10520316
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| | |||||||||||||| | |||||||||    
T  10520366 gagcttaaaaatgaagatttagtgtgaaaaatgtcaaaaattccgagagca 10520316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 21518684 - 21518734
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcct 53  Q
    ||||||||||||||||||| || | |||| ||||||| |||||||||||||    
T  21518684 tgatttttaaaatgttgttataaggcgtaagttggatggttttgagtgcct 21518734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 430
Target Start/End: Original strand, 41782876 - 41782938
Alignment:
Q  368 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg 430  Q
    |||| |||| |||||||| ||||||||| |||||| |||||||| | | ||||||||||||||    
T  41782876 atgaatgatggttgattgttgatttatgtataatttcatttaaacaaattatacaagttgttg 41782938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 7507092 - 7507133
Alignment:
Q  211 ttccttgagctcgccatagcgagcagtgcactcgcgtggcga 252  Q
    |||||| ||||||||||| |||||||||||||||| ||||||    
T  7507092 ttccttcagctcgccataccgagcagtgcactcgcctggcga 7507133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 14945501 - 14945534
Alignment:
Q  123 tttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||||||||||||||||||||||||||||    
T  14945501 tttagtgagaaaaatgtcaaaactcccgagagca 14945534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 15373094 - 15373127
Alignment:
Q  123 tttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||||||||||||||||||||||||||||    
T  15373094 tttagtgagaaaaatgtcaaaactcccgagagca 15373127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 417
Target Start/End: Original strand, 15731595 - 15731644
Alignment:
Q  368 atgattgattgttgattgctgatttatgcataattgcatttaaatagaat 417  Q
    |||||||||||||||||| ||| ||||| || |||| |||||||||||||    
T  15731595 atgattgattgttgattgttgaattatgtatgattgtatttaaatagaat 15731644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 37243929 - 37243962
Alignment:
Q  123 tttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||||||||||||||||||||||||||||    
T  37243929 tttagtgagaaaaatgtcaaaactcccgagagca 37243962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15142763 - 15142711
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| |||||||||||||||||| || ||||||    
T  15142763 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaacttccaagagca 15142711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 15731320 - 15731368
Alignment:
Q  77 caagttgttagatcaaaaagggaattggggagcttaaaaatgaggattt 125  Q
    |||||| || |||||||||||||||| || |||||||||||| ||||||    
T  15731320 caagtttttggatcaaaaagggaattaggaagcttaaaaatggggattt 15731368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15839128 - 15839076
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  15839128 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 15839076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 46348450 - 46348510
Alignment:
Q  198 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 257  Q
    ||||| ||||||||| |||| ||||||||||||||| || || ||||||| ||||||||||    
T  46348450 gcgagcagcccattttcttgtgctcgccatagcgagtagatgtactcgcgaggcgagttgc 46348510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 368; Significance: 0; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 1 - 528
Target Start/End: Complemental strand, 43112702 - 43112175
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |  | ||| | ||||||||| |||||| ||||||||||||| | |    
T  43112702 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtgcctagatgtttatggagaggactggtcaagtttttagatcaaaaagagga 43112603  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||| ||||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  43112602 ttagggagcttagaaatgaggatttagtaagaaaaatgtcaaaactttcgagagcagcaattttctgctcgccacggtgaacgacttactcgccatagcg 43112503  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggtt 300  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  43112502 agtagcccatttccatgagcttgccatagcgagcagtgcactcacctggcgagttgcacagtggctgaagccgtatttgtgttttacgtactgttgggtt 43112403  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43112402 ggattctttggatagaacaaataattatgataaattatgttattttactagagctgttgatttgaatatgattgattgttgaatgctgatttatgcataa 43112303  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 500  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  43112302 tttcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcacgagttaaccatgttgaggtgtaagacatatttaaatatgca 43112203  T
Q  501 ttgttgagtagtagttgttgatgtccat 528  Q
     |||||| |||||||||| | |||||||    
T  43112202 ctgttgaatagtagttgtcgttgtccat 43112175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 12 - 320
Target Start/End: Complemental strand, 20387169 - 20386863
Alignment:
Q  12 aaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagctt 111  Q
    |||||||||| |||| |||  ||||||| |||||||||||||  | |||||||| ||||| |||||||||| || |||||||| |||| || ||||||||    
T  20387169 aaatgttgttataggacgtgggttggatggttttgagtgcctagatatgtatagagaggattgggcaagtttttggatcaaaagggga-ttagggagctt 20387071  T
Q  112 aaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtagcccatt 211  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| |||||| ||  || |||||||| || ||||||||||||||    
T  20387070 aaaaatgaggatttagtgtgaaaaatgtcaaaactcccgagagcagctattttctgctctccacggcgagtgacttactcgccatcgcgagtagcccatt 20386971  T
Q  212 tccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggttggattctttgg 311  Q
    | ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  20386970 ttcttcagctcgccatagcgagcagtgcacttgcctggcgagttgcacagtggctgaagccgcatctgtgttttgtgtactgttgggttggattc-ttgg 20386872  T
Q  312 gtagaataa 320  Q
    |||||||||    
T  20386871 gtagaataa 20386863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 2 - 528
Target Start/End: Original strand, 15003479 - 15004006
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  15003479 ttgatttttaaaatgttgttttaagtagtatgttggatggttttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 15003578  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| | ||| |||| |||||||    
T  15003579 tagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttaatcgccatagcga 15003678  T
Q  202 gtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-ttttacgtactgttgggt 299  Q
    |||||| |||| |||||| ||||| |||||||| | ||||||||| |  |||||| | |||| ||||||| |||||||||| ||||   || |||  |||    
T  15003679 gtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcacgagttactcagtagctgaagtcgcatctgtgtttttgaatattgtgtggt 15003777  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    ||||||| | | |||| | |||| |||||||||||||||| |||||||||  ||||||||| |||||||||||||||||||| ||| || || ||| |||    
T  15003778 tggattc-tcgtgtaggacaaatgattatgattaattatgctattttaccaaagctgttgagttgaatatgattgattgttgtttgttgtttgatgtata 15003876  T
Q  400 attgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatg 498  Q
     ||  ||||||||| | |||||||| | ||| || || |||| |||| ||||||||||| | | ||||| |||||||||||||||  ||   ||||||||    
T  15003877 tttatatttaaataaattatacaagattttgaataccgttgtacaaaggttgttgtgtcacaaattgacaatgttgaggtgtaagtcatgaataaatatg 15003976  T
Q  499 cattgttgagtagtagttgttgatgtccat 528  Q
    |  ||||| |||||||  |||| |||||||    
T  15003977 cgctgttgtgtagtaggagttgctgtccat 15004006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 3 - 520
Target Start/End: Complemental strand, 22617307 - 22616791
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || | |||| ||||||| |||||||||||||| |  | | ||| ||||||||||| | || |||||| |||||| || ||    
T  22617307 tgatttttaaaatgttgttataagacgtaagttggatggttttgagtgcctggattttt-tagagaggactgggccaatttttagattaaaaagtga-tt 22617210  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcga 201  Q
     |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||| |||| | |||||||| |||||||    
T  22617209 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcctgctcgccacggcgaacaacttactcgccatagcga 22617110  T
Q  202 gtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctg-tgttttacgtactgttgggt 299  Q
    |||||| |||| |||||| ||||||||||||||| ||||||||| |||||| ||||| ||||||||| |||||||| ||   ||||  |||||||||||     
T  22617109 gtagcctattttcttgagttcgccatagcgagcaatgcactcgcctggcgaattgcatagtggctgagagccgcatttgcatttttgtgtactgttgggc 22617010  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    |||| || ||||||| |||  |||||  |||||||||||   |||||| | ||| |  ||||||| |||||| |||||  ||||||  |||||  | |||    
T  22617009 tggaatc-ttgggtataat-gataatcctgattaattataacattttatcagagtttctgatttgcatatgaatgattactgattgtggatttgagtata 22616912  T
Q  400 attgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgc 499  Q
    |||| || |||||| | |||||||||||||| |||||| |||  || ||||  |||| || |||||||| |||||| |  ||||  ||||||| ||||||    
T  22616911 attgtatgtaaataaattatacaagttgttgaattccaatgttgaatgttgcggtgttgctagttgaccttgttgatgcataagtcatatttatatatgc 22616812  T
Q  500 attgttgagtagtagttgttg 520  Q
    |||| || ||||||| |||||    
T  22616811 attgatgtgtagtagatgttg 22616791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 316 - 528
Target Start/End: Complemental strand, 20385567 - 20385355
Alignment:
Q  316 aataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaataga 415  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  |||| |    
T  20385567 aataaataattatgattaattatgttattttaccagagctgttgatttgaatatgattgattgttgattgttgatttatgtataattgcatt--aataaa 20385470  T
Q  416 atatac-aagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatata-tttaaatatgcattgttgagtagta 513  Q
    |||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||  ||||||||||||  ||| |||||||||||| ||||| ||||||    
T  20385469 atatacaaagttgttgaattccattgtcgaaagttgttgtgtcacgagttgaccacattgaggtgtaagtcatattttaaatatgcactgttgtgtagta 20385370  T
Q  514 gttgttgatgtccat 528  Q
    | ||| |||||||||    
T  20385369 gatgtcgatgtccat 20385355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 307 - 528
Target Start/End: Original strand, 22434314 - 22434529
Alignment:
Q  307 tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca 405  Q
    ||||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||       |||| |||||| ||    
T  22434314 tttgggtagaataaataattatgattaattatgctatttttactagagctgttgatttgaatatgattgattgttgatt-------tatgtataattaca 22434406  T
Q  406 tttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgtt 505  Q
    |||||||| |||||||||||||||| || ||||||||||||||||||||||| | |||||||||||||||||||||||  ||||||||||||| | ||||    
T  22434407 tttaaataaaatatacaagttgttgaatgccattgtcaaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgtactgtt 22434506  T
Q  506 gagtagtagttgttgatgtccat 528  Q
    |  |||||| ||||| |||||||    
T  22434507 gtatagtagatgttgttgtccat 22434529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 22433992 - 22434275
Alignment:
Q  1 cttgattttt-aaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaaggga 99  Q
    |||||||||| ||||||| |||  ||| |||  ||||||| |||||| ||||||| | || ||||| |||||| ||||||||| || | |||||||        
T  22433992 cttgatttttcaaaatgtcgttacaggacgtgggttggatggttttgggtgcctggatatatatagagaggaccgggcaagtttttgg-tcaaaaaaaag 22434090  T
Q  100 attggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagc 199  Q
    ||| |||||||||||||||||||||||| | ||||||| |||||||||||||||||| | |||||||||||||||||  ||  || ||||||||  ||||    
T  22434091 attagggagcttaaaaatgaggatttagtgtgaaaaatatcaaaactcccgagagcaactattttctgctcgccacgacgagtgacttactcgccctagc 22434190  T
Q  200 gagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgag-ttgcacagtggctgaagccgcatctgtgtttt 285  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||| ||| ||||||||    
T  22434191 gagtag-ccatttccttgagctcgccatagcgagtagtgcactcgcctggcgagattgcacagtggctgatgccacat-tgtgtttt 22434275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 477
Target Start/End: Complemental strand, 15267848 - 15267399
Alignment:
Q  15 tgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaa 114  Q
    |||||||||| |  ||| ||||||| |||||||||||||| |  | | ||| |||||||| |  | || | |||| ||||||   ||| |||||||||||    
T  15267848 tgttgttttaagatgtaagttggatagttttgagtgcctggatgtttttagagaggactgagacaattttcagattaaaaagatgattagggagcttaaa 15267749  T
Q  115 aatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgagtagcccatttc 213  Q
    ||||| ||||||| |||||||||||||||||||||||||||| || |||||| ||||||||||          |||||||||||||||||| | ||||||    
T  15267748 aatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgctatagcgagtaactcatttc 15267659  T
Q  214 cttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttacgtactgttgggttggattctttgg 311  Q
     ||||| |||||| | ||||||| |||||||||| |||||||||| ||||  |||||||||  ||| ||| |||   || |||||| |||||||  |||     
T  15267658 -ttgagttcgccacaacgagcagatgcactcgcgaggcgagttgctcagtacctgaagccgtttctatgtatttgaatattgttgg-ttggatt--ttgt 15267563  T
Q  312 gtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaa 411  Q
    |||| | ||||| |||||||||||| |||||||||||| |||||||||| || | ||||||  ||||||||||||||  ||||| ||| ||  |||||||    
T  15267562 gtaggacaaatagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatatttatatttaaa 15267465  T
Q  412 tagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgagg 477  Q
    || | |||||||||||||| ||| |||| ||||| |||||||| ||   ||||||| |||||||||    
T  15267464 taaattatacaagttgttgaatttcattttcaaaggttgttgtatcattagttgactatgttgagg 15267399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 3 - 272
Target Start/End: Original strand, 22920355 - 22920624
Alignment:
Q  3 tgatttttaaaatgttgtttt-aggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||||||| ||||||| | |||||| ||||||| |||||  ||||||||||  |||||| |||||||| || |||||||||||| ||    
T  22920355 tgatttttaaaatgttgtttttaggtcgtgttttggatggttttgactgccttgacatgtatagaaaggactaggcaagtttttggatcaaaaaggggat 22920454  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | | ||||||||||||| |||||| | | |||||   || |||   |||||||||   | |||||||||||||||  |||| | ||||| || || ||||    
T  22920455 tagagagcttaaaaatggggatttggtgtgaaaataatc-aaatggccgagagcaagcagtttctgctcgccacgacgaacaacttacttgccatggcga 22920553  T
Q  202 gtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagcc 272  Q
     |  ||||||| |||||||| ||||||||||||||||| ||||| |||||| || | || |||||||||||    
T  22920554 atcacccattttcttgagctggccatagcgagcagtgctctcgcctggcgaatttctcaatggctgaagcc 22920624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 518
Target Start/End: Original strand, 22521607 - 22521805
Alignment:
Q  319 aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata 418  Q
    ||||| ||||||||||||||||||||| ||| ||||| |||| || | ||||||  ||||||||||||||  ||||| ||||||  ||||||||| | ||    
T  22521607 aaatagttatgattaattatgttattt-accggagctattgaattaagtatgatgaattgttgattgctg--ttatgtataattatatttaaataaatta 22521703  T
Q  419 tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatt--taaatatgcattgttgagtagtagtt 516  Q
    |||||||||||| ||| |||| | ||| |||||||| ||   ||||||| |||||||||||||||  |||||  || |||||||||||||||||| ||||    
T  22521704 tacaagttgttgaatttcatttttaaaggttgttgtatcattagttgactatgttgaggtgtaagtcatattcatatatatgcattgttgagtagcagtt 22521803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 20011630 - 20011783
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  20011630 tgatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctggatgtttttagagaggactgggtcaatttttagattaaaaagatgaat 20011729  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     |||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  20011730 agggagcttaaaaatgaagatttagtgagaaaaacgtcaaaactcccgagagca 20011783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 25624215 - 25624330
Alignment:
Q  41 gttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtc 140  Q
    ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | |||||||||||||||| | ||||||||||||||||||    
T  25624215 gttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaatgaagttttagggagaaaaatgtc 25624314  T
Q  141 aaaactcccgagagca 156  Q
    ||||||||||||||||    
T  25624315 aaaactcccgagagca 25624330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14594366 - 14594418
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14594366 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14594418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21683305 - 21683357
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21683305 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21683357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21687654 - 21687706
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21687654 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21687706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21690047 - 21690099
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21690047 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21690099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23652600 - 23652652
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23652600 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23652652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20006796 - 20006744
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  20006796 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 20006744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21685697 - 21685749
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  21685697 gggagcttaaaaatgaatatttagtgagaaaaatgtcaaaactcccgagagca 21685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 36445377 - 36445429
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  36445377 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 36445429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 469 - 528
Target Start/End: Original strand, 21415417 - 21415476
Alignment:
Q  469 atgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    |||||||||||||||| ||||||||||||||| ||||| ||| ||||||||| |||||||    
T  21415417 atgttgaggtgtaagacatatttaaatatgcactgttgggtaatagttgttgttgtccat 21415476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 20783482 - 20783536
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  20783482 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 20783536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 22175678 - 22175732
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||    
T  22175678 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagcagc 22175732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 20973646 - 20973691
Alignment:
Q  111 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  20973646 taaaaatgaggttttagtgagaaaaatgtcaaaactcccgagagca 20973691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20839551 - 20839603
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  20839551 gggaacttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 20839603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22063195 - 22063247
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  22063195 gggagcttataattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22063247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22744265 - 22744213
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||  ||||||||||||||||||||||||||||    
T  22744265 gggagcttaaaaatgaagttttattgagaaaaatgtcaaaactcccgagagca 22744213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 33089439 - 33089387
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  33089439 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 33089387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 41009086 - 41009138
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  41009086 gggaacttaaaaatgaggttttagtgagaaaaatgtcaaaactccagagagca 41009138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 22178154 - 22178103
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||||    
T  22178154 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagc 22178103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 23652674 - 23652749
Alignment:
Q  188 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    |||||| |||||||||| ||||||| |||||| ||||||||||||| || || ||||||| |||||||||| ||||    
T  23652674 actcgccatagcgagtaacccattttcttgagttcgccatagcgagtagatgtactcgcgaggcgagttgcccagt 23652749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11392210 - 11392262
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  11392210 gggagcttataattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 11392262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 457
Target Start/End: Complemental strand, 19989456 - 19989376
Alignment:
Q  377 tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    ||||||||| ||| || || |||||| || ||||||| | ||||||| |||||||||| ||||||| || |||||||||||    
T  19989456 tgttgattgttgaattgtgtataattacacttaaataaattatacaaattgttggatttcattgtcgaaggttgttgtgtc 19989376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22025192 - 22025244
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||| ||||||||||||||||||||    
T  22025192 gggagcttagaattgatgatttagtgagaaaattgtcaaaactcccgagagca 22025244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22050767 - 22050715
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| |||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  22050767 gggaacttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22050715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 31412114 - 31412166
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  31412114 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 31412166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 31418296 - 31418348
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  31418296 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 31418348  T

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Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 14594468 - 14594515
Alignment:
Q  216 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  14594468 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 14594515  T

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Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 19987808 - 19987871
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctg 167  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||| ||| ||||  |||||||    
T  19987808 gggaacttaaaaatgaagatttagtgagaaaagtgtcaaaactcccaagaccagcctttttctg 19987871  T

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Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 1264593 - 1264543
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||    
T  1264593 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagag 1264543  T

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Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 7301132 - 7301206
Alignment:
Q  355 tgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgtt 429  Q
    |||||| ||||||||||||   ||||||||| || ||||||||||| |||||| || |||| |||||||| ||||    
T  7301132 tgttgaattgaatatgatttgctgttgattgttggtttatgcataaatgcattcaattagattatacaagatgtt 7301206  T

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Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 25624377 - 25624435
Alignment:
Q  214 cttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagc 271  Q
    ||||||||||||||||||||| | |||||||||| |||||||||| ||||  |||||||    
T  25624377 cttgagctcgccatagcgagcaaatgcactcgcgaggcgagttgcccagtatctgaagc 25624435  T

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Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 19860081 - 19860012
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||||| ||||| | ||||||||||| || ||||| ||||||| |  ||||||| |||||    
T  19860081 gggagcttaaaaatgaagattttgtgagaaaaatgttaacactccagagagcaccctttttctgttcgcc 19860012  T

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Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 21861322 - 21861399
Alignment:
Q  380 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    |||||| ||||||||| |||||| || | ||| | | |||||||||||||||| | ||||||| || |||||||||||    
T  21861322 tgattgttgatttatgtataatttcactcaaacaaattatacaagttgttggaattcattgtcgaaggttgttgtgtc 21861399  T

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Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 38185778 - 38185855
Alignment:
Q  380 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    |||||| ||||||||| |||||| || | ||| | | ||||||||| |||||| | |||||||||| |||||||||||    
T  38185778 tgattgttgatttatgtataatttcactcaaacaaattatacaagtggttggaattcattgtcaaaggttgttgtgtc 38185855  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 20973739 - 20973783
Alignment:
Q  214 cttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 257  Q
    |||||||||||||| |||||||| |||||||||| ||||||||||    
T  20973739 cttgagctcgccatggcgagcagatgcactcgcgaggcgagttgc 20973783  T

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Target: chr2 (Bit Score: 347; Significance: 0; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 2 - 528
Target Start/End: Complemental strand, 23375591 - 23375067
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||  |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  23375591 ttgatttttaaaatgttgttttaggtcgtatgttggat-gttttgagtgcctagatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 23375493  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | || ||||    
T  23375492 tagggagcttaaaaatgaggatttagtaagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggggaacgacttactctccatggcga 23375393  T
Q  202 gtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggttg 301  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  23375392 gtagcccattttcttgagctcgccatagcgagcagtgcactcgcctggcgagttgcacagtggctgaagccgtatttgtgttttacgtactgttgggttg 23375293  T
Q  302 gattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataat 401  Q
    |||||||||||  ||| ||||| ||||||| |||||||||||||||||  |||||||||||||||||| |||||||||||||| |||||||||||||| |    
T  23375292 gattctttggggggaacaaatagttatgatgaattatgttattttacctaagctgttgatttgaatat-attgattgttgatttctgatttatgcatagt 23375194  T
Q  402 tgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcat 501  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||| |||||||||||||||     
T  23375193 tgcatttaaatagaatatacaagttgttggattccattgtcaaaagtcgttgtgtcatgagttgaccatgttaaggtgtaagacatatttaaatatgcac 23375094  T
Q  502 tgttgagtagtagttgttgatgtccat 528  Q
    ||||||||||||||||| | |||||||    
T  23375093 tgttgagtagtagttgtcgttgtccat 23375067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 6 - 514
Target Start/End: Complemental strand, 24160937 - 24160429
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| |||| |||  ||||||| |||||||||| |||||  | | ||| |||| |||| |||||| ||||||||||||||| ||| ||    
T  24160937 ttttcaaaatgttgttataggacgtgagttggatggttttgagtgtctgaatgtttttagagagggctggacaagtttttagatcaaaaaggggattagg 24160838  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||| |||| | |||||||| |||||||||||    
T  24160837 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaaagcaccatttttctgctcgccacggcgaacaacttactcgccatagcgagtag 24160738  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttacgtactgttgggttggat 304  Q
    ||| ||| ||  |||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| ||  ||||  ||||||||||| ||||     
T  24160737 ccctttttctgaagctcgccatagcgagcagtgcactcgcctggcgagttgcatagtggctgagagccgcatttgcattttgtgtactgttgggctggaa 24160638  T
Q  305 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 404  Q
    || ||||||| | ||||||||  ||||||||||| |||||||| | ||| || |||||||||||||| |||||||||||||  |||||||| ||||||||    
T  24160637 tc-ttgggtatattaaataatcctgattaattatattattttatcagagttgctgatttgaatatgaatgattgttgattgtggatttatgtataattgc 24160539  T
Q  405 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 504  Q
    || |||||| | |||||||||||||| ||||||||||| || |||||| ||||   ||||||||||||||| |||||||  ||||||| ||||||| ||     
T  24160538 atgtaaataaattatacaagttgttgaattccattgtcgaaggttgttatgtcattagttgaccatgttgatgtgtaagtcatatttatatatgcactgc 24160439  T
Q  505 tgagtagtag 514  Q
    || |||||||    
T  24160438 tgtgtagtag 24160429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 3 - 475
Target Start/End: Complemental strand, 25651897 - 25651426
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||| ||||||| |  | |||| ||||||| |||||||||||||| |  | | ||| ||||||||| | | || |||||| ||||||   |||    
T  25651897 tgatttttaaattgttgttattagacgtaagttggatggttttgagtgcctggatgtttttagagaggactggactaatttttagattaaaaagatgatt 25651798  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgag 202  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| || ||| ||||||||||||| |||| |   |||||| ||||||||    
T  25651797 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgatagcaccattttcctgctcgccacggcgaacaacgaactcgccatagcgag 25651698  T
Q  203 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttacgtactgttgggtt 300  Q
    |||||| ||| ||||||||||||||||||||| | ||||||||| | ||||||||| |||||||||| |||||| ||||  ||| | |||||||||||||    
T  25651697 tagccc-ttttcttgagctcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtggctgagagccgcttctgcttttgatgtactgttgggtt 25651599  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    ||| |  |||||||   | |||||||||||||||||||  ||||||| | ||| |||||| ||| |||||| ||||||||||||| ||||||  | || |    
T  25651598 ggaat-gttgggtatttttaataattatgattaattataatattttatcagagttgttga-ttgtatatgaatgattgttgattgttgatttgagtatga 25651501  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttga 475  Q
    ||| || |||| | | |||| ||||||||| |||||| |||  || ||||| |||| || |||||||||||||||    
T  25651500 ttgtatgtaaacaaattatataagttgttgaattccaatgttgaatgttgtggtgttgctagttgaccatgttga 25651426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 311 - 520
Target Start/End: Complemental strand, 40261649 - 40261438
Alignment:
Q  311 ggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcattta 409  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  40261649 ggtagagtaaataattatgattaattatgttatttttaccagagctgttgatttgaatatgattgattgttgattgttgatttatgtgtaattgcattta 40261550  T
Q  410 aatagaatatac-aagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgag 508  Q
    | || ||||||| ||||||||| || |||||| |||||||||||||||| | |||||||||||||||| |||| |  ||||||||||||||| ||||| |    
T  40261549 attaaaatatacaaagttgttgaatgccattgccaaaagttgttgtgtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgttgtg 40261450  T
Q  509 tagtagttgttg 520  Q
    ||||||||||||    
T  40261449 tagtagttgttg 40261438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 33 - 268
Target Start/End: Complemental strand, 40261942 - 40261707
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    |||||||  ||||| ||||||| | || ||||| |||||||||||||||| || ||||||||| |  ||| |||||||||||||||||||||||| | ||    
T  40261942 gttggatgattttgggtgcctggatatatatagagaggactgggcaagtttttggatcaaaaaagagattagggagcttaaaaatgaggatttagtgtga 40261843  T
Q  133 aaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcga 232  Q
    |||||||||||||||||||||| | | |||||||||||||||||| ||| || |||||||  ||||||||||| ||||||||||||||| ||||||||||    
T  40261842 aaaatgtcaaaactcccgagagaaactattttctgctcgccacggcgaatgacttactcgtcatagcgagtag-ccatttccttgagcttgccatagcga 40261744  T
Q  233 gcagtgcactcgcgtggcgag-ttgcacagtggctga 268  Q
    ||||||||||||| |||| || ||||||||| |||||    
T  40261743 gcagtgcactcgcctggcaagattgcacagtagctga 40261707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 307 - 528
Target Start/End: Complemental strand, 23085772 - 23085549
Alignment:
Q  307 tttgggtagaataaataattatgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatt-tatgcataattgc 404  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||  |||||||||||||||||||||||||| ||||||| |  || ||||  ||||||     
T  23085772 tttgggtagaataaataattatggttaattatgttgtttctaccaaagctgttgatttgaatatgattgattattgattgattgttctatgtgtaattgt 23085673  T
Q  405 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 504  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||| | ||| | |||||||||||||||| |||| |  ||||||||||||||| |||    
T  23085672 atttaaataaattatacaagttgttgaatgccattgccaaaagttgtagagtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgt 23085573  T
Q  505 tgagtagtagttgttgatgtccat 528  Q
    || ||||||||||||| |||||||    
T  23085572 tgtgtagtagttgttgttgtccat 23085549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 104 - 476
Target Start/End: Complemental strand, 22841525 - 22841166
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||| ||||||||||          ||||||| ||||||||    
T  22841525 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgag 22841436  T
Q  203 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttacgtactgttgggtt 300  Q
    |||| |||||| ||||| ||||||||||||| || |||||||||| |||||||||| |  |  |||||||||  | | ||| |||   ||||||||| ||    
T  22841435 tagctcatttc-ttgagttcgccatagcgagtagatgcactcgcgaggcgagttgctcgatacctgaagccgtttttatgtatttgaatactgttgg-tt 22841338  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    |||||  ||| |||| | ||||| |||||||||||| |||||||||||| |||||||||| || | ||||||  |||| |||||||||  ||||| |||     
T  22841337 ggatt--ttgtgtaggacaaatagttatgattaattgtgttattttaccggagctgttgaattaagtatgatgaattgctgattgctg--ttatgtatat 22841242  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgag 476  Q
    ||  ||||||||| | |||||||||||||| ||| |||| ||||| |||||||| ||   ||||||| ||||||||    
T  22841241 ttatatttaaataaattatacaagttgttgaatttcattttcaaaggttgttgtatcattagttgactatgttgag 22841166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 328 - 520
Target Start/End: Complemental strand, 21903515 - 21903322
Alignment:
Q  328 tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt 426  Q
    |||||||||||||| ||| |||  ||||||||||||||||||||||||||| ||||||| ||   |||| ||||||  ||||||||| | ||||||||||    
T  21903515 tgattaattatgttgtttctactagagctgttgatttgaatatgattgattattgattgttgtcctatgtataattatatttaaataaattatacaagtt 21903416  T
Q  427 gttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttg 520  Q
    |||| || |||||| ||||||||||| |||| | |||||||||||||||| |||| |  ||||||||||||||| ||||| |||||||| ||||    
T  21903415 gttgaatgccattgacaaaagttgttatgtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgttgtgtagtagtagttg 21903322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 307 - 528
Target Start/End: Original strand, 20353137 - 20353337
Alignment:
Q  307 tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca 405  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||| |    
T  20353137 tttgggtagaataaataattatgatta-ttatgttatttttaccagagctgttgatttgaatatgattgattgttgattgttgttttatgtataattgaa 20353235  T
Q  406 tttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgtt 505  Q
    |||||||| ||||||                     |||||||||||||||| | |||||||||||||||||||||||  |||||||| |||||| ||||    
T  20353236 tttaaataaaatata---------------------caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaagtatgcactgtt 20353314  T
Q  506 gagtagtagttgttgatgtccat 528  Q
    | ||||||| ||||| |||||||    
T  20353315 gtgtagtagatgttgttgtccat 20353337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 174
Target Start/End: Complemental strand, 23086070 - 23085902
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||| | |||| |||  |||||||  ||||||||||||| |  | ||||| ||||| |||||||||| || |||||| ||    ||| ||    
T  23086070 ttttcaaaatgttgctataggacgtgggttggatgtttttgagtgcctggatgtttatagagaggattgggcaagtttttggatcaagaaaaagattagg 23085971  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 174  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||||||||   |||||||||||||||    
T  23085970 gagcttaaaaatgagaatttagtgtgaaaaatgtcaaaactcccgagagcaattattttctgctcgcca 23085902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 24669338 - 24669493
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||| ||||||| || |  ||| ||||||| ||||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   |    
T  24669338 cttgatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatga 24669437  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     | |||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  24669438 atagggagcttaaaaatgacgagttagtgagaaaaatgtcaaaactcccgagagca 24669493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 363 - 514
Target Start/End: Complemental strand, 22109740 - 22109588
Alignment:
Q  363 tgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcga 461  Q
    ||||||||||||||||||| ||| || || ||| ||| ||  ||||||||| | |||||||| | ||| || ||||||| |||| ||||||||||| |||    
T  22109740 tgaatatgattgattgttgtttgttgtttgatgtatatttatatttaaataaattatacaagattttgaataccattgtgcaaaggttgttgtgtcacga 22109641  T
Q  462 gttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtag 514  Q
     ||||| |||||||||||||||  ||   |||||||||||||||| |||||||    
T  22109640 attgacaatgttgaggtgtaagtcatgaataaatatgcattgttgtgtagtag 22109588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 23085899 - 23085824
Alignment:
Q  198 gcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgag-ttgcacagtggctgaagcc 272  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||  ||| ||||||||||||||    
T  23085899 gcgagtagcccttttccttgagctcgccatagcgagcagtgcactcgcctggagagaatgcccagtggctgaagcc 23085824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19036043 - 19035991
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19036043 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19035991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21121238 - 21121290
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21121238 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21121290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23149170 - 23149118
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23149170 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23149118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23560960 - 23560908
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23560960 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23560908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 25267764 - 25267712
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  25267764 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 25267712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 23291486 - 23291437
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  23291486 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 23291437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 17634454 - 17634402
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  17634454 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 17634402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23753351 - 23753299
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23753351 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23753299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 25174431 - 25174379
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  25174431 gggagcttaaaaatgaagatttggtgagaaaaatgtcaaaactcccgagagca 25174379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 25365537 - 25365589
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  25365537 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 25365589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 525
Target Start/End: Original strand, 10039933 - 10040075
Alignment:
Q  382 attgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgta 481  Q
    |||| ||||||||| |||||| |||||||| | | |||||||||||||| | | ||||| | || |||||||||||   ||||||||||||||| | |||    
T  10039933 attgttgatttatgtataattacatttaaacaaattatacaagttgttgaaattcattgccgaaggttgttgtgtc-atagttgaccatgttgatgagta 10040031  T
Q  482 agatatatttaaatatgcattgttgagtagtagttgttgatgtc 525  Q
    ||  ||||| | ||||||||| ||| |||| |||||||| ||||    
T  10040032 agtcatattcatatatgcattattgtgtagcagttgttgttgtc 10040075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 32911100 - 32911147
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  32911100 cttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 32911147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 24943938 - 24943888
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  24943938 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 24943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 20913949 - 20913998
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  20913949 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgaga 20913998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 22790644 - 22790701
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtat 63  Q
    |||| |||||||||||||||| ||| |||||||| |||||||||||||| ||||||||    
T  22790644 ttttcaaaatgttgttttaggacgtgtgttggatggttttgagtgcctggacatgtat 22790701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 24652877 - 24652828
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  24652877 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 24652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 2106134 - 2106082
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  2106134 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 2106082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 8889583 - 8889635
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||| ||||| ||||||| |||||||||||||||| |||||||||||    
T  8889583 gggagcttaagaatgaagatttagtgagaaaaatgtcaaaattcccgagagca 8889635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20648636 - 20648584
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  20648636 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 20648584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20724573 - 20724521
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  20724573 gggaacttaaaaatgaggttttactgagaaaaatgtcaaaactcccgagagca 20724521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 24659321 - 24659269
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  24659321 gggaacttaaaaattaagatttagtgagaaaaatgtcaaaactcccgagagca 24659269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 25107083 - 25107135
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  25107083 gggaacttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 25107135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19703097 - 19703149
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| | | | ||||| ||||||||||||||||||||||||||||    
T  19703097 gggagcttaaaattaaagttttagtgagaaaaatgtcaaaactcccgagagca 19703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22810437 - 22810385
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| |||||||| || ||||||| ||||||||| ||||||||||||||||||    
T  22810437 gggaacttaaaaaagaagatttagtgagaaaaatatcaaaactcccgagagca 22810385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 14564353 - 14564302
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  14564353 ggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 14564302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19649159 - 19649211
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||| ||||    
T  19649159 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgaaagca 19649211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 27272677 - 27272625
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| |||||  | || |||||||||||||||| |||||||||||    
T  27272677 gggagcttaaaattgaggtctgagtgagaaaaatgtcaaaattcccgagagca 27272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 28970910 - 28970950
Alignment:
Q  133 aaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||||||||||||||||||||  ||||||| |||||    
T  28970910 aaaatgtcaaaactcccgagagcagcctttttctgttcgcc 28970950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 325; Significance: 0; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 2 - 518
Target Start/End: Original strand, 28204105 - 28204620
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||| |||||||| ||||||| ||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  28204105 ttgatttttaaaatgttattttaggtagtatgttcgatagttttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 28204204  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||| || ||||    
T  28204205 tagggcgcttaaaaatgaggatttagtcagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccatggcgaacgacttactcgccatcgcga 28204304  T
Q  202 gtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggttg 301  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||  |||||| | |||||    
T  28204305 gtagcccatttccttgagctcgccatagcgagcagtgcactcgcctgacgagttgcacagtggctgaagccgcatttgtgttttgagtactgataggttg 28204404  T
Q  302 gattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataat 401  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  28204405 gattcttcgggtagaataaataattgtgataaattatgttattttatcagagctgttgatttgaatat-attgattgttgattgctgatttatgcatagt 28204503  T
Q  402 tgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcat 501  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||| |||||||||||||||     
T  28204504 tgcgtttaattagaatatacaagttgttggattccattgtcaaaagtcgtcgtgtcacgagttaaccatgttgaggtgtaagacatatttaaatatgcac 28204603  T
Q  502 tgttgagtagtagttgt 518  Q
    |||| ||||||||||||    
T  28204604 tgtttagtagtagttgt 28204620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 2 - 528
Target Start/End: Complemental strand, 20901807 - 20901280
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||| |  |  || | ||||||||||| | || ||| || ||||||    |    
T  20901807 ttgatttttaaaatgttgttttaggtcgtatgtcggatggttttgagtgcctggatgttaatggagaggactgggccaatttttatattaaaaagatgtt 20901708  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | | |||||||||||||| ||||||| ||||||||||||||||||  |||||||| || ||||||||||||||||| |||| | |||||||| |||||||    
T  20901707 tagagagcttaaaaatgaagatttagtgagaaaaatgtcaaaactttcgagagcaccatttttctgctcgccacggcgaacaacttactcgccatagcga 20901608  T
Q  202 gtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacg-tactgttgggt 299  Q
    |||||| |||| |||||| ||||| |||||||||  ||||||||| |  |||||||| |||| ||||||||||||||||||||||    ||||||| |||    
T  20901607 gtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcacgagttgctcagtagctgaagccgcatctgtgtttttgaatactgtttggt 20901509  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    ||||||||  | |||| | |||||||||| |||||||||| ||||||||| |||||| ||| |  ||||||| ||||||||||||| || || ||| |||    
T  20901508 tggattctc-gtgtaggacaaataattataattaattatgctattttaccagagctgctgagtcaaatatgactgattgttgattgttgtttgatgtata 20901410  T
Q  400 attgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatg 498  Q
     ||  ||||||||| | |||||||||| ||| || ||||| | |||| ||||||||||| | | ||||  |||||||||||||||  ||   ||||||||    
T  20901409 tttatatttaaataaattatacaagtttttgaataccattatacaaaggttgttgtgtcacaaattgataatgttgaggtgtaagtcatgaataaatatg 20901310  T
Q  499 cattgttgagtagtagttgttgatgtccat 528  Q
    || ||||| | ||||| |||||||||||||    
T  20901309 cactgttgtgaagtagatgttgatgtccat 20901280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 14801058 - 14800939
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||||| |||||||||||||  ||||||| ||| |||||||||  |||| ||||| ||||||| |||||||| || |||||||||||||||| ||    
T  14801058 ttttgaaaatgctgttttaggtcgtgggttggatggttatgagtgccttgacatatatagagaggactaggcaagtttttggatcaaaaagggaattagg 14800959  T
Q  106 gagcttaaaaatgaggattt 125  Q
    ||||||||||||| ||||||    
T  14800958 gagcttaaaaatggggattt 14800939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 14809932 - 14809813
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||||| |||||||||||||  ||||||| ||| |||||||||  |||| ||||| ||||||| |||||||| || |||||||||||||||| ||    
T  14809932 ttttgaaaatgctgttttaggtcgtgggttggatggttatgagtgccttgacatatatagagaggactaggcaagtttttggatcaaaaagggaattagg 14809833  T
Q  106 gagcttaaaaatgaggattt 125  Q
    ||||||||||||| ||||||    
T  14809832 gagcttaaaaatggggattt 14809813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 268
Target Start/End: Original strand, 21527161 - 21527416
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || | |||| ||||||  |||||||||||||| |  | | |||  ||||||| || | || |||||| ||||||  ||||    
T  21527161 tgatttttaaaatgttgttataagacgtaagttggacggttttgagtgcctggatgtttttagataggactgtgccaatttttagattaaaaagataatt 21527260  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgag 202  Q
     | |||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||  ||||||||| |           |||||| ||||||||    
T  21527261 agcgagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccattttcttgctcgccatgc----------actcgccatagcgag 21527350  T
Q  203 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 268  Q
    | |||  |||| |||||||||||||||||||| | ||||||||| | ||||||||| |||| |||||    
T  21527351 tggcctttttc-ttgagctcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctga 21527416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 528
Target Start/End: Original strand, 21117996 - 21118143
Alignment:
Q  380 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtg 479  Q
    |||||| ||||||||| ||||||||||||||| | | |||||||||||||| ||| ||||||| || |||||||||||   ||||||||||||||| | |    
T  21117996 tgattgttgatttatgtataattgcatttaaacaaattatacaagttgttgaatttcattgtccaaggttgttgtgtc-atagttgaccatgttgatgag 21118094  T
Q  480 taagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    |||   ||||| | ||||||||||||| |||| |||||||| |||||||    
T  21118095 taactcatattcatatatgcattgttgtgtagcagttgttgttgtccat 21118143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 8683627 - 8683472
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||          ||||||| ||||||||    
T  8683627 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgag 8683538  T
Q  203 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 268  Q
    |||| ||||| |||||| ||||||||| |||| | ||||||||| | ||||||||| |||| |||||    
T  8683537 tagctcattt-cttgagttcgccatagtgagcaaatgcactcgcctcgcgagttgctcagtagctga 8683472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 8685914 - 8685740
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || |  ||| |||| || ||||||||||||||    | | ||| ||||||| ||  | || |||||| ||||||   |||    
T  8685914 tgatttttaaaatgttgttataagatgtaagttgaatggttttgagtgcctgggtgtttttagagaggacttggacaatttttagattaaaaagatgatt 8685815  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
     |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  8685814 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 8685740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21734035 - 21734087
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21734035 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 21734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 257
Target Start/End: Original strand, 25091798 - 25092042
Alignment:
Q  4 gatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattg 103  Q
    |||||| ||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| |||||||||   | || |||||| ||||||   |||     
T  25091798 gattttcaaattgttgttataaggtgtaagttggatagttttgagtgcctggatgtttttagagaggactggaacaatttttagattaaaaagatgatta 25091897  T
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgag 202  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||||||| |  |||||| | ||||| ||          ||||||| ||||||||    
T  25091898 gggagctcaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccctttttctcgttcgcctcg----------tactcgccatagcgag 25091987  T
Q  203 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 257  Q
    ||||||| ||||||||| |||||||||||||||| ||  |||||| ||||||||||    
T  25091988 tagccca-ttccttgagttcgccatagcgagcagatgtgctcgcgaggcgagttgc 25092042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 24476005 - 24475850
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||| ||| ||||||| || |  ||| ||||||| |||||||||||||  |  | | ||| ||||||||||  | || |||||| ||||||   |    
T  24476005 cttgattttcaaattgttgttataaggtgtaagttggatagttttgagtgccttgatgtttttagagaggactgggacaatttttagattaaaaagatga 24475906  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    || |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  24475905 ttagggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 24475850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15316120 - 15316172
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15316120 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15316172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21410292 - 21410344
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21410292 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21410344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 3706393 - 3706452
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  3706393 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 3706452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 23631518 - 23631456
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||||||||||| | |||||||    
T  23631518 gggagctttaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcacccattttct 23631456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 41312708 - 41312659
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  41312708 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 41312659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 5381191 - 5381139
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  5381191 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca 5381139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19853582 - 19853530
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19853582 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19859717 - 19859665
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19859717 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19859665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21733036 - 21732984
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21733036 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21732984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21986517 - 21986569
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  21986517 gggagcttaaaagtgaagatttagtgagaaaaatgtcaaaactcccgagagca 21986569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22434570 - 22434622
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  22434570 gggagcttaaaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22434622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23712756 - 23712704
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  23712756 gggagctttaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23712704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24238023 - 24238075
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  24238023 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 24238075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 20837818 - 20837881
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctg 167  Q
    |||| |||||||| || ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  20837818 gggaacttaaaaaggaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctg 20837881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 21745217 - 21745268
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  21745217 ggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 21745268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 31926933 - 31926982
Alignment:
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  31926933 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 31926982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 954705 - 954757
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  954705 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 954757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19666345 - 19666397
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  19666345 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 19666397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20595728 - 20595780
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||    
T  20595728 gggagctaaaaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 20595780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20849587 - 20849535
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  20849587 gggagcttaaaagtgaagatttagtgagaaaaatgtcaaaactccggagagca 20849535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 21698657 - 21698609
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 152  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  21698657 gggagcttaaaaatgaagatttagtgagaaaaatgtgaaaactcccgag 21698609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 16883173 - 16883220
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  16883173 cttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 16883220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 20941474 - 20941543
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| |||||||||| |||||||| |||||||| |  ||||||| |||||    
T  20941474 gggaacttaaaaatgaagatttagtgagaaaaatgacaaaactctcgagagcatcctttttctgttcgcc 20941543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 21986591 - 21986675
Alignment:
Q  187 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagc 271  Q
    ||||||| || || |||| |||||||||| |||||||| ||||||||||| |||||||||| |||||||||| ||||  |||||||    
T  21986591 tactcgccatggcaagtaacccatttcct-gagctcgctatagcgagcagatgcactcgcgaggcgagttgcccagtatctgaagc 21986675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 525
Target Start/End: Complemental strand, 24960313 - 24960158
Alignment:
Q  368 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgac 467  Q
    |||| ||||||||||||| ||||||||| |||||| || ||||| | | |||||||||||||| | | ||||| | || ||||||| |||   || ||||    
T  24960313 atgaatgattgttgattgttgatttatgtataattacacttaaacaaattatacaagttgttgaaattcattg-cgaaggttgttgcgtc-atagctgac 24960216  T
Q  468 catgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtc 525  Q
    |||||||| | |||||  ||||| | ||||||||| ||| |||| |||||||| ||||    
T  24960215 catgttgatgagtaagtcatattcatatatgcattattgtgtagcagttgttgttgtc 24960158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20243103 - 20243051
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| | ||||||||||||||||||||||||||    
T  20243103 gggagcttagaattgatgatttagtgcgaaaaatgtcaaaactcccgagagca 20243051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21664726 - 21664674
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||    
T  21664726 gggaacttaaaaatgaagatttactgagaaaaatgttaaaactcccgagagca 21664674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 30491054 - 30491106
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||| |||||||| ||| |||||    
T  30491054 gggagcttaaaaatgaagatttagtgagaaaaatatcaaaacttccgtgagca 30491106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 36917641 - 36917589
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  36917641 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 36917589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 20823989 - 20824048
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||| ||||||| ||||||||| |||||||||||| |||||||  ||||||| |||||    
T  20823989 aaatgaagatttagtgagaaaaatatcaaaactcccgtgagcagcctttttctgttcgcc 20824048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 29554069 - 29554116
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  29554069 cttaaaaatgaagatttagtgaaaaaaatgtcaaaactctcgagagca 29554116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 29601881 - 29601932
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    ||||||||| || ||||| || || |||||||||||||||||||||||||||    
T  29601881 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagc 29601932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 43088894 - 43088851
Alignment:
Q  113 aaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||    
T  43088894 aaaatgaagatttagtgagaaaaatgacaaaactcccgagagca 43088851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 19336335 - 19336297
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaa 142  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  19336335 gggagcttaaaaatgaagatttagtgagaaaaatgtcaa 19336297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 36615445 - 36615395
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  36615445 gagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 36615395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 19853509 - 19853444
Alignment:
Q  198 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||| ||||| ||| |||| ||||||||||||||| || |||||||||| |||||||||| ||||    
T  19853509 gcgagcagcccgttttcttgtgctcgccatagcgagtagatgcactcgcgaggcgagttgcccagt 19853444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 19859644 - 19859579
Alignment:
Q  198 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||| ||||| ||| |||| ||||||||||||||| || |||||||||| |||||||||| ||||    
T  19859644 gcgagcagcccgttttcttgtgctcgccatagcgagtagatgcactcgcgaggcgagttgcccagt 19859579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 11140722 - 11140766
Alignment:
Q  219 gctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||    
T  11140722 gctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 11140766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 20086171 - 20086246
Alignment:
Q  187 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||||| |||||||||| |||||| ||||||| ||||||||||||| || || ||| ||| |||||||||| ||||    
T  20086171 tactcgccatagcgagtaacccatt-ccttgagttcgccatagcgagtagatgtacttgcgaggcgagttgcccagt 20086246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21921322 - 21921270
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || |||||||||||||||| |||||||||||    
T  21921322 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaattcccgagagca 21921270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24108626 - 24108678
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  24108626 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 24108678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 49328556 - 49328504
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  49328556 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 49328504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 324; Significance: 0; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 2 - 528
Target Start/End: Original strand, 33661949 - 33662475
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgt-atagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||| |  | | || | ||||||||  |||||| ||||||||||||| | |    
T  33661949 ttgatttttaaaatgttgttttaggtagtatgttggatgattttgagtgcctggatgttttatggagaggactgatcaagtttttagatcaaaaagagga 33662048  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||  |||||||| | |||||| ||||| || || |||    
T  33662049 ttagggagcttaaaaatgaggatttagtcagaaaaatgtcaaaactcccgagagcagcaattttcaactcgccacagcgaacgacttacttgccatggcg 33662148  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| || ||||||||  |||||| ||||||    
T  33662149 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcctggcgagttgcacagtggctgaaaccgtatatgtgttttgagtactgatgggtt 33662248  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||||||||     
T  33662249 ggattctttgggtagaataaataattgtgataaattatgttattttatcagagctgttgattcgaatat-attgattgttgattgctgatttatgcatag 33662347  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 500  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  33662348 ttgcatttaattagaatatacaagttgttggattccattgtcaaaagtcgtcgtgtcacgagttaaccatgttgaggtgtaagacatatttaaatatgca 33662447  T
Q  501 ttgttgagtagtagttgttgatgtccat 528  Q
     ||||||||||||||||| | |||||||    
T  33662448 ctgttgagtagtagttgtggttgtccat 33662475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 6 - 530
Target Start/End: Original strand, 16371104 - 16371628
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||||||| || |||| |||  ||||||| |||||||||||||| |  | | ||| |||||||||||||||| ||||||||||||| | ||| ||    
T  16371104 ttttcaaaatgttcttataggacgtgagttggatggttttgagtgcctggatgtttttagagaggactgggcaagtttttagatcaaaaagaggattagg 16371203  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| | || | |||||||| |||||||||||    
T  16371204 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcggacaacttactcgccatagcgagtag 16371303  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttacgtactgttgggttggat 304  Q
    ||| ||| ||  || ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||||||  ||||||||||| ||||     
T  16371304 ccctttttctgaagttcgccatagcgagcagtgcactcgcctgacgagttgcacagtggctgagagccgcatttgtgttttgtgtactgttgggctggaa 16371403  T
Q  305 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 404  Q
    || ||||||| | ||||| ||  ||||||||||| |||||||| | ||| || |||||||||||| | ||||| |||||||   ||||||| ||||| ||    
T  16371404 tc-ttgggtatattaaatgatcttgattaattatattattttatcagagttgctgatttgaatataaatgattattgattgtgaatttatgtataatcgc 16371502  T
Q  405 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 504  Q
    || |||||| | |||||||||||||| ||||||||||| || ||||||||||  | ||||||||||||||| |||||||  ||||||| ||||||| ||     
T  16371503 atgtaaataaattatacaagttgttgaattccattgtcgaaggttgttgtgttactagttgaccatgttgatgtgtaagtcatatttatatatgcactgc 16371602  T
Q  505 tgagtagtagttgttgatgtccatct 530  Q
    || ||||||| ||| | |||||||||    
T  16371603 tgtgtagtagatgtcgttgtccatct 16371628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 8711223 - 8710945
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |  |||||||||||||||| || ||||||||||||||    
T  8711223 cttgatttttaaaatgttgttttaggtcgtttgttggatggttttgagtgcctggacatgtacaaagaggactgggcaagtttttggatcaaaaagggaa 8711124  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || ||||||||||||||| |||||||| | |||||||||||||||||||||||| ||| |||||||||||||||||| ||  || |||||||| || |||    
T  8711123 ttagggagcttaaaaatggggatttagtgtgaaaaatgtcaaaactcccgagagtagctattttctgctcgccacggcgagtgacttactcgccatcgcg 8711024  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctg 279  Q
    ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  8711023 agttgcccattttattgagctcgccatagcgagcagtgcactcgcctggcgagttgcacagtggctgaagccacatctg 8710945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 2 - 528
Target Start/End: Complemental strand, 13878454 - 13877927
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  | ||| | || ||||   |||||| ||||||||||||| | ||    
T  13878454 ttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctggatgtttatggagaagactaatcaagtttttagatcaaaaagaggat 13878355  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||| || || | | ||||||||  ||||||    
T  13878354 tagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccatggcgagcaacttactcgccctagcga 13878255  T
Q  202 gtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacg-tactgttgggt 299  Q
    |||||| |||| |||||| ||||| || ||||||  ||||||||| | ||||||||| |||| ||||||||||||||||||||||    ||||||| |||    
T  13878254 gtagcctattttcttgagttcgcc-taccgagcaaatgcactcgcctcgcgagttgctcagtagctgaagccgcatctgtgttttttaatactgtttggt 13878156  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    ||||| ||  | |||| | |||||| ||||| |||||||| |||||||||  |||||  || |||||||||||| |||| |||||| || || ||| |||    
T  13878155 tggatcctc-gtgtaggacaaataactatgaataattatgctattttaccatagctgcagagttgaatatgattaattgctgattgttgtttgatgtata 13878057  T
Q  400 attgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatg 498  Q
     ||  ||||||||| | |||||||||| ||| |  ||||||| |||| ||||||||||| | |  |||| |||||||||||||||  ||   ||||||||    
T  13878056 tttatatttaaataaattatacaagtttttgaaaaccattgtacaaaggttgttgtgtcacaaactgacaatgttgaggtgtaagtcatgaataaatatg 13877957  T
Q  499 cattgttgagtagtagttgttgatgtccat 528  Q
    || ||||| ||||||| ||||| |||||||    
T  13877956 cactgttgtgtagtagctgttgttgtccat 13877927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 6 - 500
Target Start/End: Original strand, 15416262 - 15416754
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||| |||||| |||| |||  ||||||| |||||||||||||| |  | | ||| |||||||||||||||| ||||||||||| |   ||| ||    
T  15416262 ttttcaaaacgttgttataggacgtgagttggatggttttgagtgcctggatgtttttagagaggactgggcaagtttttagatcaaaaggatgattagg 15416361  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
     ||||||||||||| ||||||| |||||||||||||||||||||||||||| |  ||| ||||||||||||  |||| |  ||||||| |||||||||||    
T  15416362 aagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcacctttttgctgctcgccacgtcgaacaacctactcgccatagcgagtag 15416461  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttacgtactgttgggttggat 304  Q
    ||| ||| ||  || |||||||||||| ||| |||||||| | ||||||||| |||||||||| |||||||| ||  ||| | ||| ||||||| ||||     
T  15416462 ccccttttctgaagttcgccatagcgaacagagcactcgcctcgcgagttgctcagtggctgagagccgcatttgcatttga-gtattgttgggctggaa 15416560  T
Q  305 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 404  Q
    || || ||||   | ||||||  ||||||||||| ||||||||   ||| || |||||||||||||| |||||||||||||  ||||  || ||||||||    
T  15416561 tc-ttaggta-ttttaataatcctgattaattatattattttattagagttgctgatttgaatatgaatgattgttgattgtggattattgtataattgc 15416658  T
Q  405 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 500  Q
    || |||||| | |||||||||||||  |||||| |||| || |||||||||||   ||||||||||||||| |||||||  ||||||| |||||||    
T  15416659 atgtaaataaattatacaagttgttaaattccaatgtcgaaggttgttgtgtcattagttgaccatgttgatgtgtaagtcatatttatatatgca 15416754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 2 - 528
Target Start/End: Complemental strand, 13882059 - 13881555
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||  |  | ||| | ||||||||  |||||| ||||||||||| | | ||    
T  13882059 ttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctagatgtttatggagaggactgatcaagtttttagatcaaaaggaggat 13881960  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | |||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||                      |||| |    
T  13881959 tagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactctcgagagcaccatttttctgctcgcc---------------------ctagcaa 13881881  T
Q  202 gtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-ttttacgtactgttgggt 299  Q
    |||||| |||| |||||| ||||| |||||||| | ||||||||| | ||||||||| || | |||||| ||||||||||| ||||   ||||||| |||    
T  13881880 gtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgctcaatagctgaatccgcatctgtgtttttgaatactgtttggt 13881782  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    |||| || | | |||| | |||||| ||||| |||||||| ||||||||| ||||||  || ||||||||||||||||| |||||| || || ||| |||    
T  13881781 tgga-tcctcgtgtaggacaaataactatgaataattatgctattttaccagagctgcagagttgaatatgattgattgctgattgttgtttgatgtata 13881683  T
Q  400 attgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatg 498  Q
      |  ||||||||| | |||||||||| ||| || ||||||| |||| ||||||||||| | | ||||| |||||||||||||||  ||   ||||||||    
T  13881682 --tatatttaaataaattatacaagtttttgaataccattgtacaaaggttgttgtgtcacaaattgacaatgttgaggtgtaagtcatgaataaatatg 13881585  T
Q  499 cattgttgagtagtagttgttgatgtccat 528  Q
    || |||||  | |||||||||| |||||||    
T  13881584 cactgttgtattgtagttgttgttgtccat 13881555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 21189341 - 21189513
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| |||||||||| || | ||    
T  21189341 ttgatttttaaaatgttattttaggtcgtatattggatggttttgagtgcctggacatgtatagagaggactgggcaagtttttagatcaaagagaggat 21189440  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcca 174  Q
      ||||||||||| |||||||||||  |||||||||||||||||||||||||||| | |||||||| ||||||    
T  21189441 cagggagcttaaatatgaggatttaatgagaaaaatgtcaaaactcccgagagcacctattttctgttcgcca 21189513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 15076031 - 15075857
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || |  ||| |||||||||||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  15076031 tgattttcaaattgttgttataagatgtaagttggatcgttttgagtgcctggatgtttttagagaggactgggacaatttttagattaaaaagatgaat 15075932  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||||  | ||||| |||||||||||    
T  15075931 acggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcataatttttcttgctcgccacg 15075857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 104 - 524
Target Start/End: Complemental strand, 32490335 - 32489926
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| || ||||| |||||||||||          ||||||| |||| |||    
T  32490335 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcacgagagcaccatttttcttgctcgccacg----------tactcgccatagggag 32490246  T
Q  203 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctg-aagccgcatctg-tgttttacgtactgttgggt 299  Q
    |||| ||||| |||||| |||||||||| ||| | ||||||||| | ||||||||| |||| |||| |||| || | ||   ||||   ||| ||| |||    
T  32490245 tagctcattt-cttgagttcgccatagcaagcaaatgcactcgcctcgcgagttgctcagtagctgaaagctgcttttgcaattttgtatacggtttggt 32490147  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    |||| || || ||||  || | ||||  |||||||||||  | ||||| | ||| || ||||||| ||||||  ||||||||||||   ||||| | |||    
T  32490146 tggaatc-ttaggta-tattattaatcctgattaattataatgttttatctgagttgctgatttgtatatgaaggattgttgattgtgtatttaagtata 32490049  T
Q  400 attgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgc 499  Q
    |||| ||  ||||| | |||||||||||||| ||| || |||  |  ||||| |||| || |||||| ||||||||  ||||||  ||||||| ||||||    
T  32490048 attgtatgaaaataaattatacaagttgttgaatttcaatgttgagtgttgtagtgttgctagttgatcatgttga--tgtaagtcatatttatatatgc 32489951  T
Q  500 attgttgagtagtagttgttgatgt 524  Q
    ||||||| ||||||| |||||||||    
T  32489950 attgttgtgtagtagatgttgatgt 32489926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 453 - 528
Target Start/End: Original strand, 21189933 - 21190008
Alignment:
Q  453 gtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    ||||||| ||||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||| | |||||||    
T  21189933 gtgtcgcaagttgactatgtggaggtgtaagacatatttaaatatgcattgtagagtagtagttgtcgttgtccat 21190008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18165901 - 18165953
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18165901 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18165953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 30239633 - 30239581
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  30239633 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 30239581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 14555698 - 14555751
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcag 157  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14555698 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcag 14555751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15004728 - 15004780
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  15004728 gggagcttaaaaaagaagatttagtgagaaaaatgtcaaaactcccgagagca 15004780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15360438 - 15360490
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15360438 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15360490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16228735 - 16228787
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  16228735 gggagcttaaaaatgaagattcagtgagaaaaatgtcaaaactcccgagagca 16228787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 16485205 - 16485153
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  16485205 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 16485153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 17176927 - 17176875
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  17176927 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaaagca 17176875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18261862 - 18261810
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  18261862 gggagcttaaaaatgaagatttagtgacaaaaatgtcaaaactcccgagagca 18261810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18271827 - 18271775
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  18271827 gggagcttaaaaatgaagatttagtgacaaaaatgtcaaaactcccgagagca 18271775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 41528700 - 41528752
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  41528700 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 41528752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 53904961 - 53905013
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  53904961 gggagcttaaaaatgaagatttagtgagaaatatgtcaaaactcccgagagca 53905013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 10972550 - 10972604
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  10972550 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 10972604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 15318556 - 15318458
Alignment:
Q  67 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 165  Q
    ||||||||||  | || |||||| ||||||   ||| |||||||||||||||| ||||||| |||||||||||||||||||  ||||||| || |||||    
T  15318556 gaggactgggacaatttttagattaaaaagatgattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcttgagagcaccatttttc 15318458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 23122162 - 23122104
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctg 167  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||||||  |||||||    
T  23122162 cttagaaatgaggatttagtgagaaaaatgtcaaaactcctgagagcagcctttttctg 23122104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 20940828 - 20940759
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||||||||| ||||||||| || ||||||| |||||    
T  20940828 gggagcttagaattgatgatttagtgagaaaaatgtcaaaacttccgagagcaccacttttctgttcgcc 20940759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11170856 - 11170908
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  11170856 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 11170908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14821918 - 14821866
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  14821918 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccaagagca 14821866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 15069431 - 15069295
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| |||||||||| |  ||| ||||||| |||||||||||||| |  | | ||| ||| ||||||  | || |||||| ||||||  || |    
T  15069431 tgattttcaaattgttgttttaagatgtaagttggatggttttgagtgcctggatgtttttagagagtactgggacaatttttagattaaaaagataaat 15069332  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgt 139  Q
     |||||||||||||||| ||||||| |||||||||||    
T  15069331 agggagcttaaaaatgaagatttagtgagaaaaatgt 15069295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15547120 - 15547068
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  15547120 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 15547068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19127951 - 19128003
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||||| || || ||||||||||||||||||||||||||||    
T  19127951 gggagcttaaaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 19128003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 10783899 - 10783953
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||||||||||| ||| | ||||| |||||||||||||||||||| |||||||||    
T  10783899 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcctgagagcagc 10783953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 516
Target Start/End: Complemental strand, 15318356 - 15318162
Alignment:
Q  319 aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaata 418  Q
    |||||| ||||||||||  || ||||||||| |||||||| | || | ||||||  ||||||||||||||  || || ||| ||  ||||||||| | ||    
T  15318356 aaataactatgattaatcgtgctattttaccagagctgttaaattaagtatgatgaattgttgattgctg--ttgtgtatatttatatttaaataaacta 15318259  T
Q  419 tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagtt 516  Q
    |||||||||||| ||| |||| ||||| |||| ||| ||    |||||| |||||| || |||||  ||||  | |||||||||||||||||| ||||    
T  15318258 tacaagttgttgaatttcatt-tcaaaggttgatgtatccttggttgactatgttgtggagtaagtcatatacatatatgcattgttgagtagcagtt 15318162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 430
Target Start/End: Original strand, 27849267 - 27849333
Alignment:
Q  364 gaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg 430  Q
    |||||||| |||| |||||||| ||||||||| |||||| |||||||| | | ||||||||||||||    
T  27849267 gaatatgaatgatggttgattgttgatttatgtataatttcatttaaacaaattatacaagttgttg 27849333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 1650673 - 1650742
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| | ||| | |||||||||||||||||||||||||||| |  ||||||| |||||    
T  1650673 gggaacttaaaaatgaagttttcgtgagaaaaatgtcaaaactcccgagagcaccccttttctgttcgcc 1650742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 14158225 - 14158177
Alignment:
Q  188 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcag 236  Q
    |||||| || |||||||| || |||||||||||||||||||||||||||    
T  14158225 actcgccatggcgagtaggccttttccttgagctcgccatagcgagcag 14158177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 49051521 - 49051469
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  49051521 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 49051469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 14164909 - 14164862
Alignment:
Q  188 actcgctatagcgagtagcccatttccttgagctcgccatagcgagca 235  Q
    |||||| || |||||||| || ||||||||||||||||||||||||||    
T  14164909 actcgccatggcgagtaggccttttccttgagctcgccatagcgagca 14164862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 43284530 - 43284565
Alignment:
Q  121 gatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| ||||||||||||||||||||||||||||    
T  43284530 gatttagtgagaaaaatgtcaaaactcccgagagca 43284565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2972341 - 2972393
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| |  ||||| || || ||||||||||||||||||||||||||||    
T  2972341 gggagcttagatttgaggtttgagtgagaaaaatgtcaaaactcccgagagca 2972393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13454291 - 13454239
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| |||||||||||||||||||| |||||||    
T  13454291 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactccagagagca 13454239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 14484889 - 14484837
Alignment:
Q  211 ttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||| ||||||||||||||||||||  ||||||||| |||||||||| ||||    
T  14484889 ttcctggagctcgccatagcgagcagaggcactcgcgaggcgagttgcccagt 14484837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14487155 - 14487104
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||| ||||||||    
T  14487155 gggaacttaaaaatgaagatttagtgagaaaa-tgtcaaaactctcgagagca 14487104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15325434 - 15325383
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||| ||| ||||||||||||||||    
T  15325434 gggaacttaaaaatgaagatttagtgagaaaa-tgttaaaactcccgagagca 15325383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16999776 - 16999828
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  16999776 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 16999828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 46044478 - 46044530
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  46044478 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 46044530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 47870647 - 47870699
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  47870647 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 47870699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 319; Significance: 1e-180; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 2 - 528
Target Start/End: Original strand, 34284 - 34808
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| ||||    
T  34284 ttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagagaat 34383  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    |  |||||||||||||||||||||||  | ||||||||||||||| |||| ||||||||||||||||||||||||| |||||  |||||||| || || |    
T  34384 taaggagcttaaaaatgaggatttagtca-aaaaatgtcaaaactaccgatagcagcaattttctgctcgccacggcgaacggcttactcgccatcgcaa 34482  T
Q  202 gtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggttg 301  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  ||||| |||| |||    
T  34483 gtagcctatttctttgagcttgccatagcgagcagtgcactcgcctggcgagttgcacagtgactgaagccgcatctgtgttttgagtactattggattg 34582  T
Q  302 gattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataat 401  Q
    ||||||||||||||||||||||||| |||| |||||||||| |||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||| |    
T  34583 gattctttgggtagaataaataattgtgataaattatgttaatttatcagagctgttgatttgaatat-attgattgttggttgctgatttatgcatagt 34681  T
Q  402 tgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcat 501  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||||||||||     
T  34682 tgcatttaaatagaatatacatgttgttggattccattgtcaaaagtcgtcgtgtcacgagttgaccatgttgaggtgtaagacatatttaaatatgcac 34781  T
Q  502 tgttgagtagtagttgttgatgtccat 528  Q
    ||||||||||||||||| | |||||||    
T  34782 tgttgagtagtagttgtcgttgtccat 34808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 45 - 97
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  45 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 6204 - 6254
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  6204 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 6254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 6 - 528
Target Start/End: Original strand, 21980407 - 21980946
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||| ||||||| |||| |||  ||||||| |||||||||||||| | ||||||||  |||||| | |||||| || |||||||||||| ||  ||    
T  21980407 ttttcaaattgttgttataggacgtgggttggatggttttgagtgcctggatatgtatagataggactagtcaagtttttggatcaaaaaggggatcagg 21980506  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||||| |||||||||||||||||  |   || |||||||| |||||||||||    
T  21980507 gagcttaaaaatgaggatttagtgtgaaaaatatcaaaactcccgagagcagctattttctgctcgccacgacgtgtgacttactcgccatagcgagtag 21980606  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttt----tac----------gtac 291  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    |||          ||||    
T  21980607 cccatttccttgagctcgccatcgcgagcagtgcactcgcctggcgagttgcacagtggctgaagccgcatctgtgttttgtgtaccttgtagcgtgtac 21980706  T
Q  292 tgttgggttggattctttgggtagaataaataattatgattaattatgtta-ttttacccgagctgttgatttgaatatgattgattgttgattgctgat 390  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  21980707 tcttgggttggattctttgggtagaataaataattatgattaattatgttatttttaccagagctgctgatttgaatatgattgattgttgattgttgat 21980806  T
Q  391 ttatgcataattgcatttaaat-agaatatac-aagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatata 488  Q
    ||||| |||||||||||||| | | || |||| ||||||||| |||||||| |||||||||||||| || |||||||||||||| ||| ||||||  |||    
T  21980807 ttatgtataattgcatttaattaaaaaaatacaaagttgttgaattccattttcaaaagttgttgtatcacgagttgaccatgtggagatgtaagtcata 21980906  T
Q  489 tttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    |||||||||||| ||||| ||||||| ||| | |||||||    
T  21980907 tttaaatatgcactgttgtgtagtagatgtcgttgtccat 21980946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 3 - 520
Target Start/End: Complemental strand, 7785853 - 7785337
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||| ||||||| || | |||| ||||||| ||||||| || | | |  | | ||| ||||||||| | | || |||||||||||||   |||    
T  7785853 tgatttttaaattgttgttataagacgtaagttggatggttttgaatgaccggatgtttttagagaggactggaccaatttttagatcaaaaagatgatt 7785754  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcga 201  Q
     |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||| |||| |   |||||| || ||||    
T  7785753 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca-caattttcctgctcgccacggcgaacaacgaactcgccatcgcga 7785655  T
Q  202 gtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttacgtactgttgggt 299  Q
    ||||||| ||| ||| |||||||||| |||||| | ||||||||| | ||||||||| |||||||||| ||||||||||   ||| | || ||||| |||    
T  7785654 gtagccc-ttttcttcagctcgccattgcgagcaaatgcactcgcctcgcgagttgctcagtggctgagagccgcatctacttttgatgtgctgtttggt 7785556  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    |||| |  |||||||   | ||||||| |||||||||||  ||||||| | |||  | ||||||| |||||| |||||||||||||  |||||| | |||    
T  7785555 tggaat-gttgggta-ttttaataattctgattaattataatattttatcagagtcgctgatttgcatatgaatgattgttgattgtggatttaagtata 7785458  T
Q  400 attgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgc 499  Q
    ||||||| |||||| | |||||||||||||| ||| || |||   | ||||| |||| || ||||||||||||||| |  ||||  ||||||| ||||||    
T  7785457 attgcatgtaaataaattatacaagttgttgaatttcaatgttggatgttgtggtgttgctagttgaccatgttgatgcataagtcatatttatatatgc 7785358  T
Q  500 attgttgagtagtagttgttg 520  Q
    ||||||| ||||||| |||||    
T  7785357 attgttgtgtagtagatgttg 7785337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 307 - 528
Target Start/End: Original strand, 21559137 - 21559353
Alignment:
Q  307 tttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgca 405  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |       ||||  ||||||||    
T  21559137 tttgcgtagaataaataattatgattaattatgttatttttaccagagctgttgatttgaatatgattgattgttgagt-------tatgtgtaattgca 21559229  T
Q  406 tttaaatagaatatacaa-gttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 504  Q
    |||||||| ||||||||| ||||||| || ||||||||||||||||||||||| | ||||| |||||||||||| ||||  ||||||||||||||| | |    
T  21559230 tttaaataaaatatacaaagttgttgaatgccattgtcaaaagttgttgtgtcacaagttgcccatgttgaggtataagtcatatttaaatatgcactat 21559329  T
Q  505 tgagtagtagttgttgatgtccat 528  Q
    || ||||||| ||| | |||||||    
T  21559330 tgtgtagtagatgtcgttgtccat 21559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 6 - 177
Target Start/End: Original strand, 21553773 - 21553944
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||| ||| |||| |||  ||||||| |||||||||||||| | |||||||| ||||| |||||||||| || ||| |||||||| | | ||    
T  21553773 ttttcaaaatgtcgttataggacgtgggttggatggttttgagtgcctggatatgtatagagaggattgggcaagtttttggatgaaaaaggggactagg 21553872  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacgg 177  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  21553873 gagcttaaaaatgaggatttagtgtgaaaaatgtcaaaactcctgagagtagctattttctgctcgccacgg 21553944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 26706943 - 26706788
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| ||||||||    
T  26706943 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgttcgccacg----------tactcgccatagcgag 26706854  T
Q  203 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 268  Q
    |||| ||||| |||||| |||||||||||||| | ||||||||| | ||||||||| |||| |||||    
T  26706853 tagctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctga 26706788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 26976677 - 26976522
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| ||||||||    
T  26976677 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgttcgccacg----------tactcgccatagcgag 26976588  T
Q  203 tagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga 268  Q
    |||| ||||| |||||| |||||||||||||| | ||||||||| | ||||||||| |||| |||||    
T  26976587 tagctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctga 26976522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 15193613 - 15193677
Alignment:
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||    
T  15193613 tggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcatcatttttct 15193677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18819469 - 18819417
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18819469 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 18819417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21901476 - 21901528
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21901476 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 21901528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 22232334 - 22232403
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  22232334 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 22232403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 22237487 - 22237556
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  22237487 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgatcgcc 22237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 427751 - 427699
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  427751 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 427699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 757917 - 757981
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  757917 cttagaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 757981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21495427 - 21495375
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  21495427 gggagcttataaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 21495375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21889116 - 21889064
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  21889116 gggagcttaaaaatgcggatttagtgagaaaaatgtcaaaactcccgagagca 21889064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23443797 - 23443849
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23443797 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23443849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 21559001 - 21559083
Alignment:
Q  186 ttactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcg-agttgcacagtggctga 268  Q
    |||||||| ||||| ||||||| ||||| ||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||    
T  21559001 ttactcgccatagcaagtagcc-atttctttgagctcgccctagagagcagtgcactcgcctggcgaagttgcacagtggctga 21559083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 23561209 - 23561260
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23561209 ggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23561260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 20843594 - 20843544
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  20843594 gagcttaaaaatgatgatttagtgagaaaaatgtcaaaactcccgagagca 20843544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 22500166 - 22500240
Alignment:
Q  84 ttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||||||||||||   | |||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||    
T  22500166 ttagatcaaaaagttgaatggggaacttggaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagc 22500240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17022394 - 17022446
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  17022394 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactaccgagagca 17022446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21830067 - 21830015
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  21830067 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 21830015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22380006 - 22379954
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  22380006 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 22379954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 25014114 - 25014066
Alignment:
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  25014114 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 25014066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 26753929 - 26753854
Alignment:
Q  378 gttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttg 453  Q
    |||||||||||||||||| |||||| || ||||||| | ||||||| |||||||||| ||||||| || |||||||    
T  26753929 gttgattgctgatttatgtataattacacttaaataaattatacaaattgttggatttcattgtcgaaggttgttg 26753854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 6404113 - 6404165
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  6404113 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 6404165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 27635489 - 27635543
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||||    
T  27635489 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 27635543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 27869566 - 27869616
Alignment:
Q  469 atgttgaggtgtaagatatatttaaatatgcattg-ttgagtagtagttgt 518  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  27869566 atgttgaggtgtaagacatatttaaatatgcactgtttgagtagtagttgt 27869616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 10035678 - 10035625
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaa-tgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| || ||||| ||||||||||||||||||||    
T  10035678 gggagcttaaaaatgaagatttagtgaaaaaaaatgtcaaaactcccgagagca 10035625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 20938161 - 20938112
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||    
T  20938161 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgaga 20938112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 10035575 - 10035528
Alignment:
Q  216 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  10035575 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 10035528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 19801540 - 19801583
Alignment:
Q  113 aaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||    
T  19801540 aaaatgaagatttagtgagaaaaatgtcaaaactcccgaaagca 19801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 20990824 - 20990763
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 165  Q
    ||||||||| || ||| | || || |||||||||||||||||||||||||||| | ||||||    
T  20990824 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagcacctattttc 20990763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 520
Target Start/End: Complemental strand, 21624850 - 21624770
Alignment:
Q  442 caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatt--taaatatgcattgttgagtagtagttgttg 520  Q
    ||||||||| |||||| | ||||||| ||||||| |||||||  |||||  || ||||||||||||||| || ||||||||    
T  21624850 caaaagttgctgtgtcacaagttgacaatgttgaagtgtaagtcatattcatatatatgcattgttgagcagcagttgttg 21624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 21889012 - 21888967
Alignment:
Q  218 agctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  21889012 agctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 21888967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 5337989 - 5338041
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  5337989 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 5338041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 21901550 - 21901625
Alignment:
Q  187 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagt 262  Q
    ||||||| || ||||||| ||  |||||| |||||||||||||||||| | |||||||||| |||||||||| ||||    
T  21901550 tactcgccatggcgagtaaccgttttcct-gagctcgccatagcgagcaaatgcactcgcgaggcgagttgcccagt 21901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 22312462 - 22312494
Alignment:
Q  124 ttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||||||||||||||||||    
T  22312462 ttagtgagaaaaatgtcaaaactcccgagagca 22312494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23075927 - 23075979
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  23075927 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 23075979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 24058118 - 24058066
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  24058118 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 24058066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 25420344 - 25420292
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  25420344 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 25420292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 39608508 - 39608560
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  39608508 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 39608560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 6 - 514
Target Start/End: Original strand, 15488 - 15996
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||| |||||| |||| |||  |||||||  ||||||||||||| |  | ||||| ||||||||| |||||| ||||||||||||| | ||| ||    
T  15488 ttttcaaaacgttgttataggacgtgggttggatgtttttgagtgcctggatgtttatagagaggactggtcaagtttttagatcaaaaagaggattagg 15587  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||| || |||||||||||    
T  15588 gagcttgaaaatgaggatttagtgagaaaaatgtcaaaactcccaagagcagcaattttctgctcgccacggcgaacaacttacttgccatagcgagtag 15687  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacgtactgttgggttggatt 305  Q
    || |||| |||||||||||| ||||||||||||||||| | |||| ||||| ||||||||||||||||||||||||||||| ||| |||| ||||||| |    
T  15688 cctattttcttgagctcgccttagcgagcagtgcactcacctggccagttgtacagtggctgaagccgcatctgtgttttaagtattgttaggttgga-t 15786  T
Q  306 ctttgggtagaataaataattatgattaattatgtta-ttttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 404  Q
    | || |||||||||||| |||||||||||||||| || ||||||  ||| || ||||||||||||||||||||| |||||| |||| |||| ||||||||    
T  15787 ccttaggtagaataaatgattatgattaattatgctatttttactagagttgctgatttgaatatgattgattgatgattgttgatctatgtataattgc 15886  T
Q  405 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 504  Q
    || |||||| | |||||||||||||| ||| ||||||| || |||||||| || |   ||||||||||||| || ||||  ||||||| ||||||| |||    
T  15887 atgtaaataaattatacaagttgttgaatttcattgtcgaaggttgttgtatcactgtttgaccatgttgaagtataagtcatatttatatatgcactgt 15986  T
Q  505 tgagtagtag 514  Q
    || |||||||    
T  15987 tgtgtagtag 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 209; Significance: 1e-114; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 77 - 528
Target Start/End: Complemental strand, 10253 - 9803
Alignment:
Q  77 caagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacg 176  Q
    |||||| ||||||||||||| | ||| |||||||||||||||| |||||||  | |||| ||||||||||||||||||||||||||||||||||||||||    
T  10253 caagtttttagatcaaaaagaggattagggagcttaaaaatgaagatttagtcacaaaa-tgtcaaaactcccgagagcagcaattttctgctcgccacg 10155  T
Q  177 gtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcat 276  Q
    | |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  10154 gcgaacgacttactcgccatagcgagtagcccatttccttgagctcgccatcgcgagcagtgcactcgcctggcgagttgcacagtagctgaagccgcat 10055  T
Q  277 ctgtgttttacgtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgat 376  Q
    |||||||||  |||||||| |||||||||| | | |||| | ||||||||||||||||||||| ||||||||| || |||  || |||||||||||||||    
T  10054 ctgtgttttgagtactgtttggttggattc-tcgtgtaggacaaataattatgattaattatgctattttaccagaactgcagagttgaatatgattgat 9956  T
Q  377 tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttga 475  Q
    ||||||||| || || ||| ||| ||  ||||||||| | |||||||||| ||  || ||||||| |||| ||||||||||| | | ||||| |||||||    
T  9955 tgttgattgttgtttgatgtatatttatatttaaataaattatacaagtttttaaataccattgtacaaaggttgttgtgtcacaaattgacaatgttga 9856  T
Q  476 ggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    ||||||||  ||   ||||||| || ||||| ||||||| ||||| |||||||    
T  9855 ggtgtaagtcatgaataaatatacactgttgtgtagtagatgttgttgtccat 9803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 4622 - 4674
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  4622 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 3 - 506
Target Start/End: Original strand, 31810 - 32316
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttt--tgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||| || | |||| ||||||| ||||  |||||||||| |  | | | | ||||||||||| | || |||||| |||||    |    
T  31810 tgatttttaaaatgttgttataagacgtaagttggatggtttgttgagtgcctggatgtttttggagaggactgggccaatttttagattaaaaatatga 31909  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || |||| ||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||  ||||||    
T  31910 ttagggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttactcgtcatagcg 32009  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttacgtactgttgggt 299  Q
    ||||||| |||| |||||| ||||||||||||||| ||||||||| ||||||||||| || ||||||| |||||||| ||   |||| ||||||||||||    
T  32010 agtagcctattttcttgagttcgccatagcgagcaatgcactcgcctggcgagttgctcaatggctgagagccgcatttg-cctttatgtactgttgggt 32108  T
Q  300 tggattctttgggtagaataaataattatgattaattatgtta-ttttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcat 398  Q
    |||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| || |||||||||| |||||||||| |||||| |||| |||| ||    
T  32109 tggattcttt-ggtagaataaataattatgattaattgtgttatttttaccagagttgctgatttgaatttgattgattgatgattgttgatctatgtat 32207  T
Q  399 aattgcatttaaatagaatatacaagttgttggattccattgtcaaaag-ttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatat 497  Q
    |||||||| | |||| | |||||||||||||| |||||||||| ||| | |||||||||| | ||||||| |||| |||||||||   ||||| | ||||    
T  32208 aattgcatgttaataaattatacaagttgttgaattccattgttaaaggtttgttgtgtcactagttgactatgtggaggtgtaaatcatattcatatat 32307  T
Q  498 gcattgttg 506  Q
    |||||||||    
T  32308 gcattgttg 32316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 9e-96; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 6 - 528
Target Start/End: Complemental strand, 17526977 - 17526456
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||||||||||||||| |||| || | ||||||| |||||||||||||| |  | | ||| ||||||||||| | || ||||||||||||||| |||  |    
T  17526977 tttttaaaatgttgttataggacgaaagttggatggttttgagtgcctggatgtttttagagaggactgggccaatttttagatcaaaaaggggattacg 17526878  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||| || ||| |||||||||||||  ||| |  ||||||| |||||||||||    
T  17526877 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagcaccattttcctgctcgccacggcaaacaacgtactcgccatagcgagtag 17526778  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctg-tgttttacgtactgttgggttgga 303  Q
    ||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||  |   ||||  ||||||||||||||||    
T  17526777 cccttttccttgagctcgccatagcgagctgtgcactcgcctggcgagttgcacagtggctgagagccgcattggcatttttgtgtactgttgggttgga 17526678  T
Q  304 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattg 403  Q
       ||| ||||  || ||||||  ||||||||||| |||||||| | ||| || |||||||| ||||| |||||| || |||  || ||||| |||| ||    
T  17526677 --attttggta-tattaataatcctgattaattatattattttatcagagttgctgatttgagtatgaatgattgctggttgtggaattatgtataactg 17526581  T
Q  404 catttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattg 503  Q
    ||| |||||| | |||||||||| ||| ||||||||||| || |||||||| | || ||||||||||||||| |||||||  ||||||| ||||||| ||    
T  17526580 catgtaaataaattatacaagttcttgaattccattgtcgaaggttgttgtattgctagttgaccatgttgatgtgtaagtcatatttatatatgcactg 17526481  T
Q  504 ttgagtagtagttgttgatgtccat 528  Q
     || ||||||| ||| | |||||||    
T  17526480 ctgtgtagtagatgtagctgtccat 17526456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 2 - 528
Target Start/End: Original strand, 23620603 - 23621129
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  23620603 ttgatttttaaaatgttgttttaggtagtatgttggatggttttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 23620702  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | |||||||||||||||  ||||||| | |||||||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||| |||||||    
T  23620703 tagggagcttaaaaatggagatttagtgtgaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttactcgccatagcga 23620802  T
Q  202 gtagcccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-ttttacgtactgttgggt 299  Q
    |||||| |||| |||||| ||||| |||||||| | |||| |    | ||||||||| |||| |||||||||||||||||| ||||   ||||||| |||    
T  23620803 gtagcctattttcttgagttcgcc-tagcgagcaaatgcatttttctcgcgagttgctcagtagctgaagccgcatctgtgttttttaatactgtttggt 23620901  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    |||| || | | |||| | |||||| ||||| |||||||| |||| | || ||||||  || |||||||||||||||||||||||| || || ||| |||    
T  23620902 tgga-tcctcgtgtaggacaaataactatgaataattatgctattgtcccagagctgcagagttgaatatgattgattgttgattgttgtttgatgtata 23621000  T
Q  400 attgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatg 498  Q
     ||  ||||||||| | |||||||||| ||| || ||||||| ||||  |||||||||| | | ||||| |||||||||| ||||  |    ||||||||    
T  23621001 tttatatttaaataaattatacaagtttttgaataccattgtacaaagtttgttgtgtcacaaattgacgatgttgaggt-taagtcaggaataaatatg 23621099  T
Q  499 cattgttgagtagtagttgttgatgtccat 528  Q
    || ||||| ||||||| ||||| |||||||    
T  23621100 cactgttgtgtagtagatgttgttgtccat 23621129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 106 - 439
Target Start/End: Original strand, 9185447 - 9185766
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||||||||| || |||  |||||||||||          ||||||| ||||||||||     
T  9185447 gagcttaagaatgaagatttagtgagaaaaatgtcaaaactcccgagagcatcattttcttgctcgccacg----------tactcgccatagcgagtaa 9185536  T
Q  206 cccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttacgtactgttgggttgga 303  Q
    ||||||| |||||| |||||||||||||||| || ||||||| |||||||||| | ||  |||||||||  | | ||| |||   || |||| |||||||    
T  9185537 cccattt-cttgagttcgccatagcgagcagatgtactcgcgaggcgagttgccctgtacctgaagccgtttttatgtatttgaatattgtt-ggttgga 9185634  T
Q  304 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattg 403  Q
    |  |||| |||| | ||||| |||||||||||| || ||||||||| |||||||||| || | ||||||  ||||||||||| ||  ||||| ||| ||     
T  9185635 t--tttgtgtaggacaaatagttatgattaattgtgctattttaccggagctgttgaattaagtatgatgaattgttgattgttg--ttatgtatattta 9185730  T
Q  404 catttaaatagaatatacaagttgttggattccatt 439  Q
     ||||||||| | |||||||||||||| ||| ||||    
T  9185731 tatttaaataaattatacaagttgttgaatttcatt 9185766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 442 - 528
Target Start/End: Complemental strand, 1584513 - 1584427
Alignment:
Q  442 caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    |||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||| |||||||    
T  1584513 caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgcactgttgagtagtagatgttgttgtccat 1584427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 328 - 513
Target Start/End: Original strand, 1590337 - 1590525
Alignment:
Q  328 tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt 426  Q
    |||||||||||||| ||| |||| ||| ||||||||||| |||| |||||| ||||||| || | |||| || |||  ||||||||| | |||| |||||    
T  1590337 tgattaattatgttgtttctaccagagttgttgatttgattatggttgattattgattgttgttctatgtatgattatatttaaataaattataaaagtt 1590436  T
Q  427 gttggattccattgt--caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagta 513  Q
    |||| ||  ||||||  |||||||||||||||| | || |||| ||||||| |||||||  ||||||||||||||| ||||| ||||||    
T  1590437 gttgaatgtcattgtaacaaaagttgttgtgtcacaagatgacaatgttgaagtgtaagtcatatttaaatatgcagtgttgtgtagta 1590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 18138221 - 18138068
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || |  ||| ||||||| |||||||||||||  || | | ||| |||| |||||| | || |||||| |||||    |||    
T  18138221 tgatttttaaaatgttgttataagatgtaagttggatggttttgagtgcctagacgtttttagagagggctgggccaatttttagattaaaaaaatgatt 18138122  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18138121 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18138068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 442 - 528
Target Start/End: Complemental strand, 1639354 - 1639268
Alignment:
Q  442 caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    |||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||| ||||  ||||||| ||||| |||||||    
T  1639354 caaaagttgttgtgtcacaagttgaccatgttgaggtgtaagtcatatttaaatatgcactgttatgtagtagatgttgttgtccat 1639268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19468385 - 19468333
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19468385 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19468333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 1593308 - 1593249
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  1593308 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 1593249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 19819458 - 19819409
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19819458 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgaga 19819409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14615899 - 14615951
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14615899 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14615951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19451836 - 19451784
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  19451836 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22798135 - 22798187
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  22798135 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca 22798187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23105754 - 23105702
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23105754 gggagtttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 23105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 18786634 - 18786579
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagca 159  Q
    |||||||||||| ||| | ||||| |||||||||||||||||||||||||||||||    
T  18786634 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagca 18786579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 21724377 - 21724436
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||  ||||||| |||||    
T  21724377 aaatgaggatttagtgagaaaaatgtcaaaacacccgagagcagcctttttctgttcgcc 21724436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 24721159 - 24721108
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  24721159 ggagcttaaaaatgaagatttagtgagaaaaatgttaaaactcccgagagca 24721108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 17414556 - 17414503
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    ||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||    
T  17414556 ggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagcagc 17414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 21476885 - 21476796
Alignment:
Q  67 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||  | || |||||| ||||||   ||| |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  21476885 gaggactgggacaatttttagattaaaaagatgattagggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 21476796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 457
Target Start/End: Complemental strand, 22346981 - 22346892
Alignment:
Q  368 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    |||| ||||||||||||| ||||||||| |||||| || ||||| | | |||||||||||||||| | |||| || || |||||||||||    
T  22346981 atgactgattgttgattgttgatttatgtataattacacttaaacaaattatacaagttgttggaattcattatcgaaggttgttgtgtc 22346892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 457
Target Start/End: Original strand, 17026988 - 17027068
Alignment:
Q  377 tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    ||||||||| ||||||||| |||||| || ||||||| | |||||||||||||| | | ||||||| || |||||||||||    
T  17026988 tgttgattgttgatttatgtataattacacttaaataaattatacaagttgttgaaattcattgtcgaaggttgttgtgtc 17027068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18315593 - 18315645
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  18315593 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 18315645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19588198 - 19588250
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| |||||||||| || ||||| ||||||||||||||||||||||||||||    
T  19588198 gggaacttaaaaatgtggttttagtgagaaaaatgtcaaaactcccgagagca 19588250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22907521 - 22907469
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  22907521 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 22907469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 26418278 - 26418330
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  26418278 gggagcttaaaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 26418330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 14374942 - 14374989
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  14374942 cttaaaaatgaggttttagtgagaaaaatgtcaaaactcccgatagca 14374989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 23233035 - 23233082
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  23233035 cttaaaaatgaagatttagtgagaaaaatgtcaaaactccagagagca 23233082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 18315667 - 18315737
Alignment:
Q  188 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 257  Q
    |||||| |||||||||  ||| ||| | ||||||||||||||||||||| |||||||||| ||||||||||    
T  18315667 actcgccatagcgagtgaccctttttcctgagctcgccatagcgagcagatgcactcgcgaggcgagttgc 18315737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 933903 - 933955
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||| |||||||    
T  933903 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcctgagagca 933955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13940956 - 13940905
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  13940956 gggaacttaaaaatgaagatttagtgagaaaa-tgtcaaaactcccgagagca 13940905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19727173 - 19727121
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||  | ||| ||||||| ||||||||||||||||||||||||||||    
T  19727173 gggagcttaggattgatgatttagtgagaaaaatgtcaaaactcccgagagca 19727121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 21470347 - 21470295
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| ||| ||||||||||||||||||||||||    
T  21470347 gggagcttaaaattgaagttttagtgaggaaaatgtcaaaactcccgagagca 21470295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23234542 - 23234594
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  23234542 gggagcttagaattgatgttttagtgagaaaaatgtcaaaactcccgagagca 23234594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 27767884 - 27767832
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||||    
T  27767884 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagagca 27767832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 2708925 - 2708882
Alignment:
Q  110 ttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||    
T  2708925 ttaaaaatgaagatttagtgagaaaaatgtcgaaactcccgaga 2708882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 417
Target Start/End: Complemental strand, 1584566 - 1584517
Alignment:
Q  368 atgattgattgttgattgctgatttatgcataattgcatttaaatagaat 417  Q
    |||||||||||||||||| ||| ||||| || |||| |||||||||||||    
T  1584566 atgattgattgttgattgttgaattatgtatgattgtatttaaatagaat 1584517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 417
Target Start/End: Complemental strand, 1639407 - 1639358
Alignment:
Q  368 atgattgattgttgattgctgatttatgcataattgcatttaaatagaat 417  Q
    |||||||||||||||||| ||||||||| || |||| ||||||||| |||    
T  1639407 atgattgattgttgattgttgatttatgtatgattgtatttaaataaaat 1639358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 21470274 - 21470225
Alignment:
Q  187 tactcgctatagcgagtagcccatttccttgagctcgccatagcgagcag 236  Q
    ||||||| |||||||||| ||||||| || ||| ||||||||||||||||    
T  21470274 tactcgccatagcgagtaacccattttctggagttcgccatagcgagcag 21470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 25773271 - 25773183
Alignment:
Q  67 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||  | || |||||| ||||||   ||| |||||||||||| ||| | ||||| ||||||| ||||||||||||||||||||    
T  25773271 gaggactgggacaatttttagattaaaaagatgattagggagcttaaaattgaagttttagtgagaaaa-tgtcaaaactcccgagagca 25773183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 28289814 - 28289882
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| ||||||| |||| ||||||||||||||| || ||||||| |||||    
T  28289814 gggagcttagaattgatgatttagtgagaaaa-tgtcgaaactcccgagagcaccacttttctgttcgcc 28289882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 28359463 - 28359500
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtca 141  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  28359463 gggagcttagaaatgaggatttagtgagaaaaatgtca 28359500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 1584841 - 1584793
Alignment:
Q  77 caagttgttagatcaaaaagggaattggggagcttaaaaatgaggattt 125  Q
    |||||| || |||||||||||||||| || |||||||||||| ||||||    
T  1584841 caagtttttggatcaaaaagggaattaggaagcttaaaaatggggattt 1584793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12446827 - 12446879
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  12446827 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 12446879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 13127907 - 13127959
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || ||||||||||||||||||||| ||||||    
T  13127907 gggagcttagaattgaggtttgagcgagaaaaatgtcaaaactcccaagagca 13127959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 14724747 - 14724683
Alignment:
Q  370 gattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggatt 434  Q
    |||||||||||| ||| ||||||||| |||||| || ||||||| | ||| ||| ||||||||||    
T  14724747 gattgattgttggttgttgatttatgtataattacacttaaataaattatgcaaattgttggatt 14724683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17207369 - 17207421
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  17207369 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 17207421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 172; Significance: 3e-92; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 204727 - 204998
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| || |||||||||||||||| || |||||||||||| |    
T  204727 cttgatttttaaaatgttgttttaggtcgtgtgttggatggttttgagtgcctggacatgtacagagaggactgggcaagtttttggatcaaaaagggga 204826  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    ||  ||||||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||| |||||||||||| ||  || |||||||| ||||||    
T  204827 ttaaggagcttaaaaatgaggatttagtgtgaaaaatgtcaaaacttccgagagcagctattttttgctcgccacggcgagtgacttactcgccatagcg 204926  T
Q  201 agtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagcc 272  Q
    ||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  204927 agttgcccattttcttgagctcgccatagcgagcagtgcactcacctggcgagttgcacaatggctgaagcc 204998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 262
Target Start/End: Complemental strand, 384830 - 384581
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagg-gaat 101  Q
    ||||||| ||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||||||||||||||  | || |||||| ||||||  |||     
T  384830 tgattttcaaattgttgttataagatgtaagttggatagttttgagtgcctggatgtttttagggaggactgggacaatttttagattaaaaagatgaaa 384731  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcg 200  Q
      |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| | |||||||||          ||||||| ||| ||    
T  384730 --gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcgtactcgccacg----------tactcgccataacg 384643  T
Q  201 agtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    |||| ||||||| |||||| ||||||||||||| || || ||||||| |||||||||| ||||    
T  384642 agtaacccattt-cttgagttcgccatagcgagtagatgtactcgcgaggcgagttgcccagt 384581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 327312 - 327260
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  327312 gggaacttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 327260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 321624 - 321572
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| | ||| | |||||||||||||||||| |||||||||    
T  321624 gggaacttaaaaatgaagtttttgtgagaaaaatgtcaaaacttccgagagca 321572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 170; Significance: 5e-91; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 2 - 528
Target Start/End: Original strand, 11088 - 11614
Alignment:
Q  2 ttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaat 101  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||  |  | ||| | ||||||||  |||||| ||||||||||||| | ||    
T  11088 ttgatttttaaaatgttgttt-aggtagtatgttggatggttttgagtgcctagatgtttatggagaggactgatcaagtttttagatcaaaaagaggat 11186  T
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcga 201  Q
    | |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||| || |||| | |||||||| |||||||    
T  11187 tagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccaaggagaacaacttactcgccatagcga 11286  T
Q  202 gtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacg-tactgttgggt 299  Q
    |||||| |||| |||||| ||||| |||||||||  ||||||||| | ||||||||| |||| ||||||||||||||||||||||    ||||||| |||    
T  11287 gtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgctcagtagctgaagccgcatctgtgtttttgaatactgtttggt 11385  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    ||||| ||  | |||| | |||||| ||||| |||||||| ||||||||| ||||||  || |||||||||||||||||||||||| |  || ||| |||    
T  11386 tggatcctc-gtgtaggacaaataactatgaataattatgctattttaccagagctgcagagttgaatatgattgattgttgattgttatttgatgtata 11484  T
Q  400 attgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatg 498  Q
     ||  ||||||||| | |||||||||| ||| || ||||||| |||| || |||||||| | | | ||| |||||||||||||||  ||   ||||||||    
T  11485 tttatatttaaataaagtatacaagtttttgaataccattgtacaaaggtcgttgtgtcacaaatagacaatgttgaggtgtaagtcatgaataaatatg 11584  T
Q  499 cattgttgagtagtagttgttgatgtccat 528  Q
    ||  |||| ||||||| ||||| |||||||    
T  11585 cacggttgtgtagtagatgttgctgtccat 11614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 153; Significance: 8e-81; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 288 - 514
Target Start/End: Complemental strand, 7498 - 7270
Alignment:
Q  288 gtactgttgggttggattctttgggtagaataaataattatgattaattatgttatttt-acccgagctgttgatttgaatatgattgattgttgattgc 386  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||     
T  7498 gtactgttgggttggattctttaggtagaataaataattaggattaattatgttatttttaccagagctgttgatttgaatatgattgattgttgattgt 7399  T
Q  387 tgatttatgcataattgcatttaaatagaatatacaa-gttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagat 485  Q
    ||| ||||| |||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||      
T  7398 tgacttatgtataattgcatttaactaaaatatacaaagttgttgaattccattgtcaaaagttgttgtgtcacgagttgaccatgttgaggtgtaagtc 7299  T
Q  486 atatttaaatatgcattgttgagtagtag 514  Q
    |||||| |||||||||||| | |||||||    
T  7298 atatttcaatatgcattgtagtgtagtag 7270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 6 - 528
Target Start/End: Complemental strand, 189421 - 188899
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| |||| | |  ||||||| |||||||||||||| |  | | ||| |||||||| ||||||| ||||||||||||||  ||| ||    
T  189421 ttttcaaaatgttgttataggacatgagttggatggttttgagtgcctggatgtatttagagaggactgtgcaagtttttagatcaaaaaggagattagg 189322  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||| |||||||||| ||||||  |||||||| ||||||||||| ||||||| || ||||||||||||| ||| |||| | |||||||| |||| ||||||    
T  189321 gagattaaaaatgaagatttactgagaaaaaagtcaaaactcctgagagcaccatttttctgctcgccgcggcgaacaacttactcgccatagtgagtag 189222  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctga-agccgcatctgtgttttacgtactgttgggttggat 304  Q
    ||| ||| ||  |||||||||||||||||   |||||||| |||||||||||||||||||||| || ||||| ||  ||||  ||||||||||| ||||     
T  189221 ccctttttctgaagctcgccatagcgagctaggcactcgcctggcgagttgcacagtggctgagagtcgcatttgcattttgtgtactgttgggctggaa 189122  T
Q  305 tctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgc 404  Q
    || ||||||| | ||||||||  ||||||||||| |||||||| | ||| || ||||||||  |||| |||||  || |||  |||||||| ||||||||    
T  189121 tc-ttgggtatattaaataatcctgattaattatattattttatcagagttgctgatttgagcatgaatgattactggttgtggatttatgtataattgc 189023  T
Q  405 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 504  Q
    || ||| || | |||||||||||||  ||| ||| ||| || |||||||| | || |||||| |||||||| |||||||  ||||||| ||||||| |||    
T  189022 atgtaattaaattatacaagttgttaaatttcatagtcgaaggttgttgtattgctagttgatcatgttgatgtgtaagtcatatttatatatgcactgt 188923  T
Q  505 tgagtagtagttgttgatgtccat 528  Q
    || ||||||| ||| | |||||||    
T  188922 tgtgtagtagatgtcgttgtccat 188899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 149; Significance: 2e-78; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 67 - 500
Target Start/End: Original strand, 182487 - 182919
Alignment:
Q  67 gaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    ||||||||||| | || ||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||  || ||    
T  182487 gaggactgggctaatttttagatcaaaaaggggattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatcttcct 182586  T
Q  167 gctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggct 266  Q
    ||| |||||   |||| | |||||||| |||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  182587 gcttgccacaacgaacaacttactcgccatagcgagtagcccttctccttgagctcgccatcgcgagcagtgcactcgcctggcgagttgcacagtggct 182686  T
Q  267 ga-agccgcatct-gtgttttacgtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttg 364  Q
    || |||||||| |    ||||  ||| ||||  |||||| ||  ||||||  || |||| |  ||||||| ||| |||||||| | ||| || |||||||    
T  182687 gagagccgcatttacatttttgtgtattgttaagttggaatc--tgggta-tattaatattcctgattaagtatattattttatcagagttgctgatttg 182783  T
Q  365 aatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagtt 464  Q
     |||||| |||||||||||||  |||||||| ||||||||||  ||||| |||||||||||||||| ||| ||||||| || |||||||| | || ||||    
T  182784 catatgaatgattgttgattgtggatttatgtataattgcatgcaaataaaatatacaagttgttgaatttcattgtcgaaggttgttgtcttgctagtt 182883  T
Q  465 gaccatgttgaggtgtaagatatatttaaatatgca 500  Q
    || |||||||| |||||||  ||||||| |||||||    
T  182884 gatcatgttgatgtgtaagtcatatttatatatgca 182919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 148; Significance: 7e-78; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 6 - 379
Target Start/End: Complemental strand, 938 - 565
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||| |  | ||||| ||||||||  |||||| ||| ||||||||| | ||| ||    
T  938 tttttaaaatgttgttttaagtagtatgttggatggttttgagtgcctggatgtttatagagaggactgatcaagtttttatatcaaaaagaggattagg 839  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||| ||||||||||     
T  838 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacttactcgccatagcgagtat 739  T
Q  206 cccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacg-tactgttgggttgga 303  Q
    || |||| |||||| ||||| |||||||||  ||||||||| | |||||||||  ||| ||||||| ||||||||||||||    ||||||  |||||||    
T  738 cctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgcttagtagctgaagtcgcatctgtgtttttgaatactgtgtggttgga 640  T
Q  304 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgt 379  Q
    ||||  | |||| | |||| | |||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  639 ttctc-gtgtaggacaaatgaatatgattaattatgctattttaccagagctgctgagttgaatatgattgattgt 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 138; Significance: 7e-72; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 67857 - 67692
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  67857 cttgatttttaaaatgttgttttaggtcgtatgttggatggttttgagtacctggacatgtatagggaggactgggcaagttgttagatcaaaaggggaa 67758  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  67757 ttagggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagctattttct 67692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 67666 - 67596
Alignment:
Q  214 cttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttt 284  Q
    |||||| || ||||||||||||||||||||| | || |||||||||||||||| ||||||||||| |||||    
T  67666 cttgagttcaccatagcgagcagtgcactcgtgaggagagttgcacagtggctaaagccgcatctatgttt 67596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 18042 - 17973
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  18042 gggagcttagaattgaagatttagagagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 17973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 88 - 528
Target Start/End: Original strand, 13471 - 13912
Alignment:
Q  88 atcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaatt 187  Q
    ||||||||| | ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||  ||||||| | ||    
T  13471 atcaaaaagaggattagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgcctaggtgaacaactt 13570  T
Q  188 actcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgtttta 286  Q
    |||||| ||||||||||||| |||| |||||| ||||| |||||||||  ||||||||| | ||||||||| |||| ||||||||||||||||||||||     
T  13571 actcgccatagcgagtagcctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgctcagtagctgaagccgcatctgtgttttt 13669  T
Q  287 cg-tactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattg 385  Q
       ||||||| |||||||| ||  | |||| | |||| | ||||| |||||||| ||||||||| ||||||  || ||||||||||||||||||||||||    
T  13670 gaatactgtttggttggatcctc-gtgtaggacaaatgactatgaataattatgctattttaccagagctgcagagttgaatatgattgattgttgattg 13768  T
Q  386 ctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaaga 484  Q
     |  || ||| ||| ||  ||||||||| | |||||||||| ||| || ||||||| |||| || |||||||| | | | ||| |||||||||||||||     
T  13769 ttatttgatgtatatttatatttaaataaagtatacaagtttttgaataccattgtacaaaggtcgttgtgtcacaaatagacaatgttgaggtgtaagt 13868  T
Q  485 tatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
     ||   ||||||||||  |||| ||||||| ||||| |||||||    
T  13869 catgaataaatatgcacggttgtgtagtagatgttgctgtccat 13912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 3 - 528
Target Start/End: Original strand, 2221 - 2746
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || | |||| ||||||| |||| ||||||||| |  | | ||| ||||||||||| | || |||||| |||| |    ||    
T  2221 tgatttttaaaatgttgttataagacgtaagttggatggtttagagtgcctggatgtttttagagaggactgggccaatttttagattaaaatgatgttt 2320  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgag 202  Q
     |||| ||||||||||| ||||||| |||||||||||||||||||||||||||| || ||| ||||||||||| | |||| |    ||||| ||||||||    
T  2321 agggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccattttcctgctcgccacagcgaacaacgatctcgccatagcgag 2420  T
Q  203 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttttacg-tactgttgggtt 300  Q
    |||||| |||| |||||||||||||||| ||||  ||||||||| | | ||||||| |||| ||||||||||||||||||||||    ||||||| ||||    
T  2421 tagcccttttc-ttgagctcgccatagcaagcaaatgcactcgcctcgtgagttgcccagtagctgaagccgcatctgtgtttttgaatactgtttggtt 2519  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    |||||||  | |||| | | |||||||||||||||||||  |||||||| |||||| ||  |||||||||||||||||||||||| || |||||| |||     
T  2520 ggattctc-gtgtaggacagataattatgattaattatgcaattttaccagagctgctgcgttgaatatgattgattgttgattgttgttttatgtatat 2618  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgc 499  Q
    ||  | ||||||| | |||||||||| | | || ||||||| |||| ||||||||| |   | ||||| |||||||||||||||  ||   |||||||||    
T  2619 ttataattaaataaattatacaagttttcgaataccattgtacaaaggttgttgtg-caaaaattgacaatgttgaggtgtaagtcatgaataaatatgc 2717  T
Q  500 attgttgagtagtagttgttgatgtccat 528  Q
    | ||||| ||||||  ||||| |||||||    
T  2718 actgttgcgtagtatatgttgttgtccat 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 126; Significance: 1e-64; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 5142 - 4771
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||| |  | ||||| |||||| |  |||||| ||||||||||||| | |||  |    
T  5142 tttttaaaatgttgttttaagtagtatgttggatggttttgagtgcctggatgtttatagagaggacggatcaagtttttagatcaaaaagaggattaag 5043  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||| |||||||||||| |||  | |||||||| |||| ||||||    
T  5042 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttttgctcgccacggcgaataacttactcgccatagagagtag 4943  T
Q  206 cccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtg-ttttacgtactgttgggttgga 303  Q
    || |||| |||||| ||||| |||||||| | ||||||||| | ||||||||| |||| ||||||| | |||||||| ||||   ||||||  ||| |||    
T  4942 cctattttcttgagttcgcc-tagcgagcaaatgcactcgcctcgcgagttgctcagtagctgaagtcccatctgtgtttttgaatactgtgtggtcgga 4844  T
Q  304 ttctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgatt 377  Q
    ||| | | |||| | |||| | |||||||||||||| ||||||||| |||||| |||  |||||||||||||||    
T  4843 ttc-tcgtgtaggaaaaatgaatatgattaattatgctattttaccagagctgctgagatgaatatgattgatt 4771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 30205988 - 30206212
Alignment:
Q  1 cttgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |  | ||| | ||||||||  |||||| ||||||||||||| | |    
T  30205988 cttgatttttaaaatgttgttttaggtagtatgttggatgattttgagtgcctggatgtttatggagaggactgatcaagtttttagatcaaaaagagga 30206087  T
Q  101 ttggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcg 200  Q
    || |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||| |  ||||||| ||||||    
T  30206088 ttagggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttctgctcgccacggcgaacaacatactcgccatagcg 30206187  T
Q  201 agtagcccatttccttgagctcgcc 225  Q
    ||||||| |||| |||||| |||||    
T  30206188 agtagcctattttcttgagttcgcc 30206212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 11325409 - 11325615
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| |||| |||  ||||||| |||||||||||||| |  | | ||| |||||||| ||||||| ||||||||||||||| ||| ||    
T  11325409 ttttcaaaatgttgttataggacgtgagttggatggttttgagtgcctggatgtttttagagaggactgagcaagtttttagatcaaaaaggggattagg 11325508  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||| || |||||||||| |||||| |||| | |||||||| |||||||||||    
T  11325509 gagcttaaaaatgaagatttagtgaaaaaaatgtcaaaactcccgagagcatcatttttctgctctccacggcgaacaacttactcgccatagcgagtag 11325608  T
Q  206 cccattt 212  Q
    |||||||    
T  11325609 cccattt 11325615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 7 - 524
Target Start/End: Complemental strand, 15232860 - 15232352
Alignment:
Q  7 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 106  Q
    ||||||| ||||| | || | |||| ||| ||| |||||||||||||| | || | ||| ||||||| ||  | || | |||| ||||||   ||| |||    
T  15232860 ttttaaattgttgctataagacgtaagttagatggttttgagtgcctggatatttttagagaggactaggacaattttcagattaaaaagatgattaggg 15232761  T
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| |||||||||||    
T  15232760 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgatcgccacg----------tactcgccatagcgagtag 15232671  T
Q  206 cccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga-agccgcatctg-tgttttacgtactgttgggttgg 302  Q
    | ||||| |||||| |||||||||||||| | ||||||||| | ||||||||| |||| ||||| |||||| | ||   ||||   ||| |||||| |||    
T  15232670 ctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctgagagccgcttttgcaattttgtatacggttgggctgg 15232572  T
Q  303 attctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataatt 402  Q
    | || |||||||  || |||||| ||||||||||||  ||||||| | ||| || ||||||| ||||||  ||||||||||||    ||||   ||||||    
T  15232571 aatc-ttgggta-tattaataatcatgattaattataatattttatctgagttgctgatttgtatatgaaggattgttgattgtgtttttaaatataatt 15232474  T
Q  403 gcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcatt 502  Q
    | ||  ||||| | |||||||||||||| ||| || |||  |  ||||| |||| || | |||| |||||||| |  ||||  ||||||| |||||||||    
T  15232473 gtatgaaaataaattatacaagttgttgaatttcaatgttgagtgttgtagtgttgctacttgatcatgttgatgcataagtcatatttatatatgcatt 15232374  T
Q  503 gttgagtagtagttgttgatgt 524  Q
    | || ||||||| |||||||||    
T  15232373 gctgtgtagtagatgttgatgt 15232352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 7 - 524
Target Start/End: Complemental strand, 15238728 - 15238220
Alignment:
Q  7 ttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattgggg 106  Q
    ||||||| ||||| | || | |||| ||| ||| |||||||||||||| | || | ||| ||||||| ||  | || | |||| ||||||   ||| |||    
T  15238728 ttttaaattgttgctataagacgtaagttagatggttttgagtgcctggatatttttagagaggactaggacaattttcagattaaaaagatgattaggg 15238629  T
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| || ||||||||          ||||||| |||||||||||    
T  15238628 agcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgatcgccacg----------tactcgccatagcgagtag 15238539  T
Q  206 cccatttccttgagctcgccatagcgagc-agtgcactcgcgtggcgagttgcacagtggctga-agccgcatctg-tgttttacgtactgttgggttgg 302  Q
    | ||||| |||||| |||||||||||||| | ||||||||| | ||||||||| |||| ||||| |||||| | ||   ||||   ||| |||||| |||    
T  15238538 ctcattt-cttgagttcgccatagcgagcaaatgcactcgcctcgcgagttgctcagtagctgagagccgcttttgcaattttgtatacggttgggctgg 15238440  T
Q  303 attctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataatt 402  Q
    | || |||||||  || |||||| ||||||||||||  ||||||| | ||| || ||||||| ||||||  ||||||||||||    ||||   ||||||    
T  15238439 aatc-ttgggta-tattaataatcatgattaattataatattttatctgagttgctgatttgtatatgaaggattgttgattgtgtttttaaatataatt 15238342  T
Q  403 gcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcatt 502  Q
    | ||  ||||| | |||||||||||||| ||| || |||  |  ||||| |||| || | |||| |||||||| |  ||||  ||||||| |||||||||    
T  15238341 gtatgaaaataaattatacaagttgttgaatttcaatgttgagtgttgtagtgttgctacttgatcatgttgatgcataagtcatatttatatatgcatt 15238242  T
Q  503 gttgagtagtagttgttgatgt 524  Q
    | || ||||||| |||||||||    
T  15238241 gctgtgtagtagatgttgatgt 15238220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 419 - 528
Target Start/End: Complemental strand, 13836738 - 13836629
Alignment:
Q  419 tacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgt 518  Q
    |||||||||||| ||  |||||||||||||||||||||| | |||||||||||||||| |||| |  ||||||||||||||| ||||| |||||||||||    
T  13836738 tacaagttgttgaatgtcattgtcaaaagttgttgtgtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgttgggtagtagttgt 13836639  T
Q  519 tgatgtccat 528  Q
    || |||||||    
T  13836638 tgttgtccat 13836629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24284046 - 24284098
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24284046 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 24284098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 15954578 - 15954640
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||    
T  15954578 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttct 15954640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12153415 - 12153363
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12153415 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12153363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12363933 - 12363881
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12363933 gggaacttaaaaatgaagatttagggagaaaaatgtcaaaactcccgagagca 12363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 13036600 - 13036648
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 152  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13036600 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgag 13036648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15011535 - 15011587
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  15011535 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15011587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16823426 - 16823478
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  16823426 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 16823478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 17496686 - 17496634
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  17496686 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 17496634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 42109745 - 42109693
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  42109745 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 42109693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 12855374 - 12855536
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || |  ||| ||||| | ||||||||||||||||  | | ||| ||||||| ||  | || |||||| ||||||   |||    
T  12855374 tgattttcaaattgttgttataagatgtaagttggttagttttgagtgcctgaatgtttttagagaggactaggacaatttttagattaaaaagatgatt 12855473  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc 165  Q
     |||||||||||||||| ||||||| |||||||||| |||||||||| |||||| || |||||    
T  12855474 agggagcttaaaaatgaagatttagtgagaaaaatggcaaaactcccaagagcaccatttttc 12855536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 10597296 - 10597365
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  10597296 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 10597365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2269877 - 2269929
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2269877 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 2269929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11305386 - 11305438
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11305386 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 11305438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11644433 - 11644485
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11644433 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 11644485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11939528 - 11939580
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11939528 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 11939580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12355598 - 12355650
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12355598 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12355650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12362147 - 12362199
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12362147 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 12362199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13692488 - 13692436
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  13692488 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 13692436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18128186 - 18128238
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18128186 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18128238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 15934574 - 15934625
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  15934574 ggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 15934625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 14288656 - 14288706
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  14288656 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 14288706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 17198665 - 17198719
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  17198665 gggaacttgaaaatgaggatttagtgagaaaaatgtcaaaactcccgaaagcagc 17198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 16829586 - 16829655
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||||| ||  |||||| |||||    
T  16829586 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagcaccatatttctgttcgcc 16829655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 16838109 - 16838178
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||||||||||||||||||| ||  |||||| |||||    
T  16838109 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagcaccatatttctgttcgcc 16838178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11964554 - 11964606
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  11964554 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacacccgagagca 11964606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12479322 - 12479374
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  12479322 gggaacttaaaaatgaagatttagtgggaaaaatgtcaaaactcccgagagca 12479374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14293270 - 14293218
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  14293270 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 14293218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14298897 - 14298845
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  14298897 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 14298845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 15519015 - 15518971
Alignment:
Q  112 aaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||    
T  15519015 aaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 15518971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18135956 - 18136008
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  18135956 gggaacttaaaaatgaagatttaatgagaaaaatgtcaaaactcccgagagca 18136008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 18718763 - 18718815
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  18718763 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 18718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 12274815 - 12274764
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||| ||||||    
T  12274815 ggagcttaaaaatgaagatttagtgagaaaaatgtcgaaactccctagagca 12274764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 12202837 - 12202791
Alignment:
Q  110 ttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||||    
T  12202837 ttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 12202791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 30206285 - 30206347
Alignment:
Q  319 aaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttg 381  Q
    |||| |||||||||||| ||| |||||| || |||||||||| |||||||||| |||||||||    
T  30206285 aaatgattatgattaataatgctattttgccagagctgttgagttgaatatgagtgattgttg 30206347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 12961024 - 12961069
Alignment:
Q  111 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||    
T  12961024 taaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 12961069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12255685 - 12255633
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || | | ||||||| ||||||||||||||||||||||||||||    
T  12255685 gggagcttagaatttaagatttagtgagaaaaatgtcaaaactcccgagagca 12255633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12256130 - 12256078
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || | | ||||||| ||||||||||||||||||||||||||||    
T  12256130 gggagcttagaatttaagatttagtgagaaaaatgtcaaaactcccgagagca 12256078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14652357 - 14652409
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||| ||||||    
T  14652357 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactccctagagca 14652409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 18961468 - 18961416
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  18961468 gggagcttagaattgatgttttagtgagaaaaatgtcaaaactcccgagagca 18961416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 35985247 - 35985195
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | | ||| ||||||||||||||||||| ||||||||    
T  35985247 gggagcttaaaaatgaagttctagtgagaaaaatgtcaaaactctcgagagca 35985195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 49163674 - 49163622
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | || || ||||||||||||||||||||||||||||    
T  49163674 gggagcttaaaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 49163622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 15011608 - 15011693
Alignment:
Q  186 ttactcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagc 271  Q
    |||||||| |||||||||| |||||||| | ||| |||||||||||||||| ||  |||||| |||||||||| ||||  |||||||    
T  15011608 ttactcgccatagcgagtaacccatttc-tggagttcgccatagcgagcagatgtgctcgcgaggcgagttgcccagtacctgaagc 15011693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 16349140 - 16349079
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    ||||||||| || ||| ||||||| |||||||||||| ||||||||||||||| || ||||||    
T  16349140 gggagcttagaattgatgatttagtgagaaaaatgtc-aaactcccgagagcaccatttttct 16349079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 20376883 - 20376933
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||    
T  20376883 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagag 20376933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 500
Target Start/End: Complemental strand, 10253 - 10200
Alignment:
Q  447 gttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgca 500  Q
    ||||||||||| | |||||||||||||||||||||||  | || ||||||||||    
T  10253 gttgttgtgtcacaagttgaccatgttgaggtgtaagtcacatctaaatatgca 10200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 16382523 - 16382591
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||| | |||||||||||| ||||||||||||||| || ||||||| |||||    
T  16382523 gggagcttagaattgatgatttcgtgagaaaaatgtc-aaactcccgagagcaccatttttctgttcgcc 16382591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 12419967 - 12419919
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 152  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||    
T  12419967 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgag 12419919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 15375152 - 15375100
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || |||||||||||||||| |||||||||||    
T  15375152 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaattcccgagagca 15375100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 46070752 - 46070804
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || || || || || ||||||||||||||||||||||||||||    
T  46070752 gggagcttagaattggggtttgagtgagaaaaatgtcaaaactcccgagagca 46070804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 116; Significance: 9e-59; HSPs: 3)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 6 - 272
Target Start/End: Complemental strand, 8192 - 7925
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| ||||||||||| |||| |||  |||||||  ||||||||||||| |  | ||||| ||||||||||||| || || |||||| ||    ||| ||    
T  8192 ttttcaaaatgttgttataggacgtgggttggatgtttttgagtgcctggatgtttatagagaggactgggcaattttttggatcaagaaaaagattagg 8093  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||   |||||||||||||||||| ||| || |||||||| |||||||||||    
T  8092 gagcttaaaaatgaggatttagtgtgaaaaatgtcaaaactcccgagagcaattattttctgctcgccacggcgaatgacttactcgccatagcgagtag 7993  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgag-ttgcacagtggctgaagcc 272  Q
    ||| |||||||||||||||||| ||||||||||||||||| ||| |||  ||| ||||||||||||||    
T  7992 cccttttccttgagctcgccatcgcgagcagtgcactcgcctggagagaatgcccagtggctgaagcc 7925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 307 - 528
Target Start/End: Complemental strand, 5746 - 5523
Alignment:
Q  307 tttgggtagaataaataattatgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatt-tatgcataattgc 404  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||  |||||||||||||||||||||||||| ||||||| |  || |||| |||||||     
T  5746 tttgggtagaataaataattatggttaattatgttgtttctaccaaagctgttgatttgaatatgattgattattgattgattgttctatgtataattgt 5647  T
Q  405 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 504  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||| | ||| | |||||||||||||||| |||| |  ||||||||||||||| |||    
T  5646 atttaaataaattatacaagttgttgaatgccattgacaaaagttgtagagtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgt 5547  T
Q  505 tgagtagtagttgttgatgtccat 528  Q
    || ||||||||||||| |||||||    
T  5546 tgtgtagtagttgttgttgtccat 5523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 6549 - 6682
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| ||||||||||||||||  | | ||| |||||||| |  | || |||||| ||||||   | | |||||||||||||||| ||||||| ||||    
T  6549 gttggatagttttgagtgcctgaatgtttttagagaggactgagacaatttttagattaaaaagatgaatagggagcttaaaaatgaagatttagtgaga 6648  T
Q  133 aaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||| ||||||| || ||||||    
T  6649 aaaatgtcaaaactcctgagagcaccatttttct 6682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 6 - 280
Target Start/End: Original strand, 26346 - 26599
Alignment:
Q  6 tttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggg 105  Q
    |||| |||||||||||||||| ||| |||||||| |||||||||||||  |||||||| | |||| ||||||||||| ||  ||||||||||||||| ||    
T  26346 ttttcaaaatgttgttttaggacgtgtgttggatggttttgagtgcctagacatgtatggagagggctgggcaagtttttgtatcaaaaagggaattagg 26445  T
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtag 205  Q
    ||||||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||| ||                     || |||||| |    
T  26446 gagcttaaaaatggggatttagtgtgaaaaatgtcaaaactcccgagagcagctattttctgctcacc---------------------atcgcgagttg 26524  T
Q  206 cccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgt 280  Q
    ||||||||||||||||||||||||||||||||||||||||  | | ||||||| |||||||||||||||||||||    
T  26525 cccatttccttgagctcgccatagcgagcagtgcactcgcccgacaagttgcatagtggctgaagccgcatctgt 26599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 118 - 284
Target Start/End: Complemental strand, 159746 - 159580
Alignment:
Q  118 gaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttg 217  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||| |||| | |||||||| |||||||||  ||| ||| ||||    
T  159746 gaggatttagtgagaaaaatgtcaaaactctcgagagcagctattttctactcgccacggcgaacaacttactcgccatagcgagttaccccttttcttg 159647  T
Q  218 agctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgttt 284  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  159646 agttcgccatagcgagcagtgcactcgcgaggcgagttgcacagtggctgaagccgcatctatgttt 159580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 307 - 528
Target Start/End: Original strand, 27729 - 27952
Alignment:
Q  307 tttgggtagaataaataattatgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatt-tatgcataattgc 404  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||  |||||||||||||||||||||||||| ||||||| |  || |||| |||||||     
T  27729 tttgggtagaataaataattatggttaattatgttgtttctaccaaagctgttgatttgaatatgattgattattgattgattgttctatgtataattgt 27828  T
Q  405 atttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgt 504  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||| | ||| | |||||||||||||||| |||| |  ||||||||||||||| |||    
T  27829 atttaaataaattatacaagttgttgaatgccattgacaaaagttgtagagtcacaagttgaccatgttgagatgtacgtcatatttaaatatgcactgt 27928  T
Q  505 tgagtagtagttgttgatgtccat 528  Q
    || ||||||||||||| |||||||    
T  27929 tgtgtagtagttgttgttgtccat 27952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 104 - 518
Target Start/End: Complemental strand, 3328 - 2924
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct-gctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||| ||||||| ||          ||||||| ||||||||    
T  3328 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcatcatttttcttgctcgccgcg----------tactcgccatagcgag 3239  T
Q  203 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttacgtactgttgggtt 300  Q
    |||| |||||| ||||| |||||||||||||||  |||||||||| |||||||| | ||||  |||||||||  | | ||| |||   || |||||| ||    
T  3238 tagctcatttc-ttgagttcgccatagcgagcaaatgcactcgcgaggcgagtttctcagtaactgaagccgtttatatgtatttgaatattgttgg-tt 3141  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    ||||| |||| |||  | ||||| |||||||||||| |||||||||||| |||||||||| |||| ||||||  ||||||||||||||  ||||| |||     
T  3140 ggatt-tttgtgtatgacaaatagttatgattaattgtgttattttaccggagctgttgagttgagtatgatgaattgttgattgctg--ttatgtatat 3044  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgtaag--atatatttaaatatg 498  Q
    ||  ||||||||| | |||||||||||||| ||| |||| ||||| |||||||| ||   |||||| ||||||||||||||||  |||| | || |||||    
T  3043 ttatatttaaataaattatacaagttgttgaatttcattttcaaaggttgttgtatcattagttgatcatgttgaggtgtaagtcatatttatatatatg 2944  T
Q  499 cattgttgagtagtagttgt 518  Q
    || |||||||||| ||||||    
T  2943 cactgttgagtagcagttgt 2924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 328 - 528
Target Start/End: Complemental strand, 34035 - 33833
Alignment:
Q  328 tgattaattatgttattt-tacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagtt 426  Q
    |||||||||||||||||| |||  ||| ||||||||||||||||||||||| ||||||| ||   |||| ||||||  ||||||||| | ||||||||||    
T  34035 tgattaattatgttatttctactagagttgttgatttgaatatgattgattattgattgttgtcctatgtataattatatttaaataaattatacaagtt 33936  T
Q  427 gttggattccattgt-caaaagttgttgtgtcgcgagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtc 525  Q
    |||| || ||||||| ||||| |||||||||| | ||||||| ||||||| |||||||  ||||||||||||| ||||||| ||||||| ||||||||||    
T  33935 gttgaataccattgtacaaaatttgttgtgtcacaagttgacaatgttgaagtgtaagtcatatttaaatatgaattgttgtgtagtagatgttgatgtc 33836  T
Q  526 cat 528  Q
    |||    
T  33835 cat 33833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 79; Significance: 1e-36; HSPs: 3)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 3 - 439
Target Start/End: Complemental strand, 35182 - 34759
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || | |||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || | |||| ||||||   |||    
T  35182 tgattttcaaattgttgttataagacgtaagttggatagttttgagtgcctggatgtttttagagaggactgggacaattttcagattaaaaagatgatt 35083  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcga 201  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| || ||||| |||||||||||          ||||||| |||||||    
T  35082 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgacagcaccatttttcttgctcgccacg----------tactcgccatagcga 34993  T
Q  202 gtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttacgtactgttgggt 299  Q
    ||| | | ||| |||||| |||||||||||||| | || ||||||| |||||||||| ||||  |||||||||  ||| ||| |||   || |||| |||    
T  34992 gtaactccttt-cttgagttcgccatagcgagccgatgtactcgcgaggcgagttgctcagtacctgaagccgtttctatgtatttgaatattgtt-ggt 34895  T
Q  300 tggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcata 399  Q
    |||||  |||| |||| | |||||||||||| ||||| |||||||||||| |||||||||| || | ||||||  |||||||||| |||  ||||| |||    
T  34894 tggat--tttgtgtaggacaaataattatgaataattgtgttattttaccggagctgttgaattaagtatgatgaattgttgatttctg--ttatgtata 34799  T
Q  400 attgcatttaaatagaatatacaagttgttggattccatt 439  Q
     ||  ||||||||| | |||||||||||||| ||| ||||    
T  34798 tttatatttaaataaattatacaagttgttgaatttcatt 34759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 174
Target Start/End: Complemental strand, 29930 - 29758
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || | |||| ||||||| |||||||||| |||||  | | ||| |||||||| |  | || | |||| ||||||   |||    
T  29930 tgattttcaaattgttgttataagacgtaagttggatagttttgagtgtctgaatgtttttagagaggactgtgacaattttcagattaaaaagatgatt 29831  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgcca 174  Q
     |||||||||||||||| ||||||| |||||||||||||||||  ||||||||| || ||||| |||||||||    
T  29830 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacgtccgagagcaccatttttcttgctcgcca 29758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 439
Target Start/End: Complemental strand, 29764 - 29518
Alignment:
Q  189 ctcgctatagcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-ttta 286  Q
    ||||| |||||||||| | | |||| ||||| |||||||||||||||| ||  |||||| |||||||| | || |  |||||||||  ||| ||| |||     
T  29764 ctcgccatagcgagtaactcctttc-ttgagttcgccatagcgagcagatgttctcgcgaggcgagtttctcaatacctgaagccgtttctatgtatttg 29666  T
Q  287 cgtactgttgggttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgc 386  Q
      ||||||||| |||||||  ||| |||| | |||||||||||| ||||| ||||||| |||| |||||||||| || | ||||||  ||||||||||||    
T  29665 aatactgttgg-ttggatt--ttgtgtaggacaaataattatgaataattgtgttattctaccggagctgttgaattaagtatgatgaattgttgattgc 29569  T
Q  387 tgatttatgcataattgcatttaaatagaatatacaagttgttggattccatt 439  Q
    ||  ||||| ||| ||  ||||||||| | |||||||||||||| ||| ||||    
T  29568 tg--ttatgtatatttatatttaaataaattatacaagttgttgaatttcatt 29518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 78; Significance: 4e-36; HSPs: 8)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 104 - 439
Target Start/End: Original strand, 21279 - 21601
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcgag 202  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||          ||||||| ||||||||    
T  21279 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg----------tactcgccatagcgag 21368  T
Q  203 tagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttacgtactgttgggtt 300  Q
    || | | ||| |||||| |||||||||||||||| || ||||| | |||||||||| ||||  |||||||||  ||| ||| |||   ||||||| ||||    
T  21369 taactccttt-cttgagttcgccatagcgagcagatgtactcgggaggcgagttgctcagtacctgaagccgtttctatgtatttgaatactgtt-ggtt 21466  T
Q  301 ggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcataa 400  Q
    ||||  |||| |||| | ||||| |||||||||||| ||||||||||||  ||||||||| || | ||||||  ||||||||||||||  ||||| |||     
T  21467 ggat--tttgtgtaggacaaatagttatgattaattgtgttattttaccgaagctgttgaattaagtatgatgaattgttgattgctg--ttatgtatat 21562  T
Q  401 ttgcatttaaatagaatatacaagttgttggattccatt 439  Q
    ||  ||||||||| | |||||||||||||| ||| ||||    
T  21563 ttatatttaaataaattatacaagttgttgaatttcatt 21601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 56392 - 56444
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  56392 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 56444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 147505 - 147453
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  147505 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 147453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 154692 - 154640
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  154692 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 154640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 252445 - 252393
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  252445 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 259051 - 258999
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  259051 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 258999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 187452 - 187503
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  187452 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 187503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 197079 - 197130
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagc 155  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  197079 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagc 197130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 284
Target Start/End: Complemental strand, 88284 - 88168
Alignment:
Q  168 ctcgccacggtgaacgaattactcgctatagcgagtagcccatttccttgagctcgccatagcgagcagtgcactcgcgtggcgagttgcacagtggctg 267  Q
    |||||||||| |||||| |||||||| |||||||||  ||| ||| |||||| ||||||||||||||||||||||| || ||| ||||||||||||||||    
T  88284 ctcgccacggcgaacgacttactcgccatagcgagttaccccttttcttgagttcgccatagcgagcagtgcactcacgaggcaagttgcacagtggctg 88185  T
Q  268 aagccgcatctgtgttt 284  Q
    ||||||||||| |||||    
T  88184 aagccgcatctatgttt 88168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 92215 - 92267
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  92215 gggagcttaaaaataaagatttagtgagaaaaatgtcaaaactcccgagagca 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0696 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 176
Target Start/End: Complemental strand, 3219 - 3045
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||||||||||| || |  ||| |||| || ||||||||||||||    | | ||| ||||||| ||  | || |||||| ||||||   |||    
T  3219 tgatttttaaaatgttgttataagatgtaagttgaatggttttgagtgcctgggtgtttttagagaggacttggacaatttttagattaaaaagatgatt 3120  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttc-tgctcgccacg 176  Q
     |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||    
T  3119 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaccatttttcttgctcgccacg 3045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 5991 - 5923
Alignment:
Q  460 gagttgaccatgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||    
T  5991 gagttgaccatgttgaggtgtaagacatatttaaatatgcactgttgagtagtagttgtcgttgtccat 5923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 44752 - 44683
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| ||||||||||||||| |||||||||| |||  ||||||| |||||    
T  44752 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaagctcccgagagtagcctttttctgttcgcc 44683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 449214 - 449337
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| |||||||||||||||| || | ||| ||||||||||  | || |||||| ||||||   | | |||||||||||||||| | ||||| ||||    
T  449214 gttggatagttttgagtgcctgaatatttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaatgaagttttagtgaga 449313  T
Q  133 aaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||||||||||    
T  449314 aaaatgtcaaaactcccgagagca 449337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 96408 - 96358
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  96408 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 96358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 179506 - 179463
Alignment:
Q  113 aaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||    
T  179506 aaaatgaagatttagtgagaaaaatgacaaaactcccgagagca 179463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 203 - 50
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  203 tgattttcaaattgttgttataagatgtaagttggatagttttgagtgcctggatgtttttagagaggactgggacaatttttagattaaaaagatgaat 104  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  103 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 1142 - 989
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||||| ||||||| || |  ||| ||||| | |||||||||||||| |  | | ||| ||||||||||  | || |||||| ||||||   | |    
T  1142 tgatttttaaattgttgttataagatgtaagttggttagttttgagtgcctggatgtttttagagaggactgggacaatttttagattaaaaagatgaat 1043  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1042 agggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 6955 - 7128
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||||| ||||||||| || |  ||| ||||||| ||||||||| |||| |  | | ||| ||||||||||  | || |||||| ||||||   |||    
T  6955 tgatttttagaatgttgttataaggtgtaagttggatagttttgagtacctggatgtttttagagaggactgggacaatttttagattaaaaagatgatt 7054  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgccacg 176  Q
      ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |  |||  |||||||||||    
T  7055 acggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcacctttttcttgctcgccacg 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 457
Target Start/End: Original strand, 1999 - 2089
Alignment:
Q  368 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttg-gattccattgtcaaaagttgttgtgtc 457  Q
    |||| ||| ||||||||| ||||| ||| |||||| || ||||||| | |||||||||||| | ||||| |||||| || |||||||||||    
T  1999 atgaatgaatgttgattgttgattgatgtataattacacttaaataaattatacaagttgtggagattcaattgtcgaaggttgttgtgtc 2089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12987 - 12935
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12987 gggagcttaaaaatgaggatttagtgagaaaaatgtcaaaactcccgagagca 12935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 259230 - 259171
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  259230 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcatttttctgttcgcc 259171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 265645 - 265586
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  265645 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcatttttctgttcgcc 265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17791 - 17843
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  17791 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccaagagca 17843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 479 - 541
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||||    
T  479 gggagcttaaaaatgaggatttagtgggaaaaatgtcaaaactcccgagagcacccattttct 541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 8804 - 8750
Alignment:
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  8804 tggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 8750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 18888 - 18834
Alignment:
Q  102 tggggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  18888 tggggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 124544 - 124606
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttct 166  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||    
T  124544 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcaacatttttct 124606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 35339 - 35285
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||| ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||    
T  35339 gggaacttaaaaatgaagatttagtgagaaaaatgttaaaactcccgagaacagc 35285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 429
Target Start/End: Original strand, 8000 - 8414
Alignment:
Q  3 tgatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaatt 102  Q
    ||||||| ||| ||||||| || | |||| ||||||| |||||||||| |||||  | | ||| ||||||||||  | || | |||| ||||||   |||    
T  8000 tgattttcaaattgttgttataagacgtaagttggatagttttgagtgtctgaatgtttttagagaggactgggacaattttcagattaaaaagatgatt 8099  T
Q  103 ggggagcttaaaaatgaggatttagggagaaaaatg-tcaaaactcccgagagcagcaattttc-tgctcgccacggtgaacgaattactcgctatagcg 200  Q
     |||||||||||||||| ||||||| || ||||| | |||||||||||||||||| || ||||| |||| ||||||          ||||| | ||||||    
T  8100 agggagcttaaaaatgaagatttagtgaaaaaaaaggtcaaaactcccgagagcaccatttttcttgctagccacg----------tactctccatagcg 8189  T
Q  201 agtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagccgcatctgtgt-tttacgtactgttggg 298  Q
    |||| | | ||| |||||| ||||||||  |||||| || ||||||| |||||||||| ||||  |||||||||  ||| ||| |||   || |||| ||    
T  8190 agtaactccttt-cttgagttcgccatattgagcagatgtactcgcgaggcgagttgctcagtacctgaagccgtttctatgtatttgaatattgtt-gg 8287  T
Q  299 ttggattctttgggtagaataaataattatgattaattatgttattttacccgagctgttgatttgaatatgattgattgttgattgctgatttatgcat 398  Q
    ||||||  |||| |||| | |||||||||||| ||||| ||||||| || | | |||||||| || | ||||||  ||||||||||||||  ||||| ||    
T  8288 ttggat--tttgtgtaggacaaataattatgaataattttgttattctatcggcgctgttgaattaagtatgatgaattgttgattgctg--ttatgtat 8383  T
Q  399 aattgcatttaaatagaatatacaagttgtt 429  Q
    | ||  ||||||||| | |||||||||||||    
T  8384 atttatatttaaataaattatacaagttgtt 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 468 - 520
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  468 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 965 - 913
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  965 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 3680 - 3732
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3680 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19057 - 19005
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19057 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 3770 - 3718
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  3770 gggagcttaaaaatgaggatttagtgagacaaatgtcaaaactcccgagagca 3718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 13036 - 13083
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  13036 cttaaaaatgaggttttagtgagaaaaatgtcaaaacttccgagagca 13083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14162 - 14110
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14162 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 14110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 352 - 300
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||||||||||  |||||| ||||||||||||||||||||| ||||||    
T  352 gggaggttaaaaatgaaaatttagtgagaaaaatgtcaaaactcccaagagca 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 267 - 202
Alignment:
Q  198 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||||||||  ||| | |||||||||||| |||||||| |||||||||| |||||||||| ||||    
T  267 gcgagtagccttttttcctgagctcgccattgcgagcagatgcactcgcgaggcgagttgcccagt 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 14077 - 14012
Alignment:
Q  198 gcgagtagcccatttccttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||||||||  ||| | ||||||||||||||||||||| |||||||||| ||| |||||| ||||    
T  14077 gcgagtagccttttttcctgagctcgccatagcgagcagatgcactcgcgaggcaagttgcccagt 14012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 26439 - 26387
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26439 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 26387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2538 - 2590
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  2538 gggagcttaaaaatgaagatttagtgaggaaaatgtcacaactcccgagagca 2590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 46065 - 46013
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46065 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 46013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22362 - 22414
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  22362 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 22414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 26559 - 26611
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26559 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 26611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 22462 - 22506
Alignment:
Q  214 cttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 257  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||    
T  22462 cttgagcttgccatagcgagcagatgcactcgcgaggcgagttgc 22506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 26659 - 26703
Alignment:
Q  214 cttgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 257  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||    
T  26659 cttgagcttgccatagcgagcagatgcactcgcgaggcgagttgc 26703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 61633 - 61685
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  61633 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 61685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 60070 - 60121
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  60070 ggagcttaaaaatgaagatttggtgagaaaaatgtcaaaactcccgagagca 60121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 61735 - 61777
Alignment:
Q  216 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgc 257  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  61735 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgc 61777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 3400 - 3452
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  3400 gggagcttaaaaatgaggatttagtgataaaaatgtcaaaactcccgagagca 3452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 1093 - 1041
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1093 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 1041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 11003 - 10952
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  11003 gggaacttaaaaatgaagatttagtgagaaaa-tgtcaaaactcccgagagca 10952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 968 - 1019
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  968 ggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 1019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 26147 - 26096
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26147 ggagcttaaaaatgatgatttagtgagaaaaatgtcaaaactcccgagagca 26096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 141882 - 141823
Alignment:
Q  114 aaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  141882 aaatgaggatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 2691 - 2637
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagc 158  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  2691 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagcagc 2637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 5008 - 5058
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  5008 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 5108 - 5155
Alignment:
Q  216 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagt 262  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  5108 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagt 5155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 55562 - 55612
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  55562 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 55612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 72518 - 72568
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  72518 gagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 72568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 46443 - 46499
Alignment:
Q  216 tgagctcgccatagcgagcag-tgcactcgcgtggcgagttgcacagtggctgaagc 271  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||  |||||||    
T  46443 tgagctcgccatagcgagcagatgcactcgcgaggcgagttgcccagtacctgaagc 46499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 80713 - 80835
Alignment:
Q  34 ttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaa 133  Q
    |||| ||||||||||||||||||  | | ||| ||||||||||  | || | |||| ||||||   | | |||||||||||||||| | ||||| |||||    
T  80713 ttggttcgttttgagtgcctgaatgtttttagagaggactgggacaattttcagattaaaaagatgaatagggagcttaaaaatgaagctttagtgagaa 80812  T
Q  134 aaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||||||||||    
T  80813 aaatgtcaaaactcccgagagca 80835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 98090 - 98142
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  98090 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 98142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 161128 - 161180
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||||| || || |||||||||||||||| |||||||||||    
T  161128 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaaatcccgagagca 161180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 71649 - 71580
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||  ||||||| |||||    
T  71649 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagcagcctttttctgttcgcc 71580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 77279 - 77228
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||  |||||| ||||||| ||||||||||||||||||||||||||||    
T  77279 ggagcttcgaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 77228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 371 - 423
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  371 gggagcttaaaactgaagatttagtgagaaaaatgtcaaaactcccgagagca 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 5030 - 4978
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  5030 gggagcttaaaaatgatgttttagggagaaaaatgtcaaaactcccaagagca 4978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2965 - 3017
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2965 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 8846 - 8898
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  8846 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 8898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2930 - 2982
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2930 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 2982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11632 - 11684
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  11632 gggaacttaaaaatgaagatttcgtgagaaaaatgtcaaaactcctgagagca 11684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 2476 - 2424
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  2476 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 23555 - 23503
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||| ||||||||||||||||||    
T  23555 gggagcttaaaaatgaagttttagtgagaaaaatatcaaaactcccgagagca 23503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 5822 - 5770
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  5822 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 9328 - 9176
Alignment:
Q  4 gatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattg 103  Q
    |||||||||| ||||||| || |  ||| ||||||| |||||||||||||| |  | | | | ||||||||||  | || |||||| ||||||   | |     
T  9328 gatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctggatgtttttggagaggactgggacaatttttagattaaaaagatgaata 9229  T
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  9228 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgatagca 9176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 27800 - 27748
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  27800 gggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 27748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 26857 - 26805
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  26857 gggagcttaaaaatgaagatttagtgagaaaaatatcaaaactcccgagagca 26805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 21503 - 21351
Alignment:
Q  4 gatttttaaaatgttgttttaggtcgtatgttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattg 103  Q
    |||||||||| ||||||| || |  ||| ||||||| ||||||||||||||||    | ||| |||||||||   | || |||||| ||||||   | |     
T  21503 gatttttaaattgttgttataaggtgtaagttggatagttttgagtgcctgaatgattttagagaggactggaacaatttttagattaaaaagatgaata 21404  T
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
     ||||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  21403 tggagcttaaaaatgaagatttagtgagaaaaatgtcaaaattcccgagagca 21351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 32070 - 32018
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  32070 gggagcttgaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 32018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 7145 - 7099
Alignment:
Q  110 ttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||    
T  7145 ttaaaaatgaagatttagtgagataaatgtcaaaactcccgagagca 7099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19755 - 19807
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19755 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 19807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 1903 - 1851
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1903 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 7479 - 7427
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  7479 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 7427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 9790 - 9738
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  9790 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 9738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 45461 - 45409
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  45461 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaacttccgagagca 45409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 9803 - 9751
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  9803 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcctgagagca 9751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 47477 - 47529
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  47477 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 47529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 42490 - 42438
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  42490 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 42438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 30369 - 30317
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  30369 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 30317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 38963 - 38911
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  38963 gggaacttaaaaatgaagaattagtgagaaaaatgtcaaaactcccaagagca 38911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 45034 - 44982
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| || |||| ||||||||||| ||||||||||||||||    
T  45034 gggaacttaaaaatgaagaattagtgagaaaaatgttaaaactcccgagagca 44982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 3434 - 3382
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3434 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 3382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 2581 - 2633
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  2581 gggagctttaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 2633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 207348 - 207400
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  207348 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaacctcccgagagca 207400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 2872 - 2749
Alignment:
Q  33 gttggatcgttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggaga 132  Q
    ||||||| |||||||||||||||| || | ||| ||||||||||  | || |||||| ||||||   | | ||||||||||||||   | ||||| | ||    
T  2872 gttggatagttttgagtgcctgaatatttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaatatagttttagtgtga 2773  T
Q  133 aaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||||||||||    
T  2772 aaaatgtcaaaactcccgagagca 2749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 525
Target Start/End: Complemental strand, 7137 - 6995
Alignment:
Q  382 attgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtgta 481  Q
    |||| ||||||||| |||||| |||||||| | | |||||||||||||| | | ||||| | || |||||||||||   ||||||||||||||| | |||    
T  7137 attgttgatttatgtataattacatttaaacaaattatacaagttgttgaaattcattgccgaaggttgttgtgtc-atagttgaccatgttgatgagta 7039  T
Q  482 agatatatttaaatatgcattgttgagtagtagttgttgatgtc 525  Q
    ||  ||||| | ||||||||| ||| |||| |||||||| ||||    
T  7038 agtcatattcatatatgcattattgtgtagcagttgttgttgtc 6995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 469 - 528
Target Start/End: Complemental strand, 1784 - 1725
Alignment:
Q  469 atgttgaggtgtaagatatatttaaatatgcattgttgagtagtagttgttgatgtccat 528  Q
    |||||||||||||||| ||||||||||||||| ||||| ||| ||||||||| |||||||    
T  1784 atgttgaggtgtaagacatatttaaatatgcactgttgggtaatagttgttgttgtccat 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 152973 - 153020
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  152973 cttaaaaatgaggttttagtgagaaaaatgtcaaaactcccgagagca 153020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20125 - 20177
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  20125 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 20177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 885 - 935
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  885 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccgagag 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 384 - 334
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  384 gagcttaaaagtgaagatttagtgagaaaaatgtcaaaactcccgagagca 334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 453
Target Start/End: Original strand, 4558 - 4636
Alignment:
Q  375 attgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttg 453  Q
    ||||||||||| ||||||||| |||||| || ||||||| | ||||||| |||||||||| ||||||| || |||||||    
T  4558 attgttgattgttgatttatgtataattacacttaaataaattatacaaattgttggatttcattgtcgaaggttgttg 4636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 3752 - 3699
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcag 157  Q
    |||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  3752 gggaacttgaaaatgaggatttagtgagaaaaatgacaaaactcccgagagcag 3699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 7791 - 7738
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcag 157  Q
    |||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  7791 gggaacttgaaaatgaggatttagtgagaaaaatgacaaaactcccgagagcag 7738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 16496 - 16565
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    |||| ||||||||||| ||||||| |||| |||||||||||||||| ||||||||  ||||||| |||||    
T  16496 gggaacttaaaaatgaagatttagtgagagaaatgtcaaaactcccaagagcagcctttttctgttcgcc 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 143223 - 143174
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgaga 153  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  143223 gggagcttaaaattgaagatttagtgagaaaaatgtcaaaactcccgaga 143174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 62831 - 62883
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  62831 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 62883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 171435 - 171480
Alignment:
Q  111 taaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  171435 taaaaatgaagatttagtgagaaaaatgtcaaaactcccgagagca 171480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 1938 - 1894
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcc 148  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  1938 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcc 1894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 6710 - 6658
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||| ||| | ||||| ||||||||||||||||||||||||||||    
T  6710 gggagcttaaaactgaagttttagtgagaaaaatgtcaaaactcccgagagca 6658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 9008 - 8956
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||||||    
T  9008 gggagcttaaaaatgaagttttagtgagaaaaatgtcaaaacttccgagagca 8956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 457
Target Start/End: Complemental strand, 19655 - 19575
Alignment:
Q  377 tgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    ||||||||| ||||||||| |||||| || ||||||| | |||||||||||||| | | ||||||| || |||||||||||    
T  19655 tgttgattgttgatttatgtataattacacttaaataaattatacaagttgttgaaattcattgtcgaaggttgttgtgtc 19575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 8893 - 8941
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgag 152  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  8893 gggagcttaaaaatgaagatttagtgaggaaaatgtcaaaactcccgag 8941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11950 - 12002
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  11950 gggagcctaaaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 12002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14106 - 14158
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  14106 gggagcttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 14158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 25994 - 25942
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||    
T  25994 gggagcttagaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 25942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 4678 - 4730
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  4678 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactctcgagagca 4730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 46376 - 46428
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  46376 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 46428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 50649 - 50701
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  50649 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactcccaagagca 50701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 441
Target Start/End: Complemental strand, 36547 - 36481
Alignment:
Q  375 attgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgt 441  Q
    ||||||||||| ||||||||| |||||| || ||||||| | ||||||| |||||||||| ||||||    
T  36547 attgttgattgttgatttatgtataattacacttaaatatattatacaaattgttggatttcattgt 36481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 28402 - 28350
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  28402 gggaacttaaaaatgaggttttactgagaaaaatgtcaaaactcccgagagca 28350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17053 - 17105
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| |||||||||||||||||||  |||||||    
T  17053 gggagcttaaaaatgaagatttagtgagaaaaatgtcaaaactcttgagagca 17105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20732 - 20680
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  20732 gggagcttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 20680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 56423 - 56371
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  56423 gggaacttaaaaatgaagatttagtgagaaaaaagtcaaaactcccgagagca 56371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 50579 - 50631
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  50579 gggagcttataattgatgatttagtgagaaaaatgtcaaaactcccgagagca 50631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 38284 - 38336
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  38284 gggaacttaaaaatgaagatttagtgagaagaatgtcaaaactcccgagagca 38336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 136344 - 136396
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  136344 gggaacttaaaaatgaagatttagtgagaagaatgtcaaaactcccgagagca 136396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 43738 - 43785
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  43738 cttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 43785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 48804 - 48851
Alignment:
Q  109 cttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  48804 cttaaaaatgaagttttagtgagaaaaatgtcaaaactcccgagagca 48851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 14192 - 14250
Alignment:
Q  115 aatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||  ||||||| |||||    
T  14192 aatgaggatttagtgagaaaaatatcaaaacttccgagagcagcctttttctgttcgcc 14250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 51316 - 51386
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtc-aaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| ||||||| |||||||||||| ||||||||||||||||||  ||||||| |||||    
T  51316 gggagcttagaattgaagatttagtgagaaaaatgtcaaaaactcccgagagcagcctttttctgttcgcc 51386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 1273 - 1386
Alignment:
Q  42 ttttgagtgcctgaacatgtatagggaggactgggcaagttgttagatcaaaaagggaattggggagcttaaaaatgaggatttagggagaaaaatgtca 141  Q
    |||||||||||||||  | | ||| ||||||||||  | || |||||| ||||||   | | |||||||||||||| | ||||||| ||||||||| |||    
T  1273 ttttgagtgcctgaatgtttttagagaggactgggacaatttttagattaaaaagatgaatagggagcttaaaaattaagatttagtgagaaaaatttca 1372  T
Q  142 aaactcccgagagc 155  Q
    ||||| ||||||||    
T  1373 aaacttccgagagc 1386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 525
Target Start/End: Complemental strand, 8949 - 8805
Alignment:
Q  380 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtcgcgagttgaccatgttgaggtg 479  Q
    |||||| |||||  || |||||| || ||||| | | |||||||||||||| | | ||||||| || |||||||||||   ||||||||||||||| | |    
T  8949 tgattgttgattgttgtataattacacttaaacaaattatacaagttgttgaaattcattgtcgaaggttgttgtgtcat-agttgaccatgttgatgag 8851  T
Q  480 taagatatatttaaatatgcattgttgagtagtagttgttgatgtc 525  Q
    ||||  ||||| | ||||||||| ||| |||| |||||||| ||||    
T  8850 taagtcatattcatatatgcattattgtgtagcagttgttgttgtc 8805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 457
Target Start/End: Original strand, 8223 - 8312
Alignment:
Q  368 atgattgattgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    |||| ||||||||||||| ||||||||| |||||| || ||||| | | |||||||||||||| | |  |||||| || |||||||||||    
T  8223 atgactgattgttgattgttgatttatgtataattacacttaaacaaattatacaagttgttgaaatttattgtcgaaggttgttgtgtc 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 9891 - 9842
Alignment:
Q  107 agcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||| ||||||| |||||| |||| ||||||||||||||||    
T  9891 agcttaaaaatgaagatttagtgagaaagatgtaaaaactcccgagagca 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 41274 - 41327
Alignment:
Q  104 gggagcttaaaaatgaggatttagggag-aaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| ||||||| ||| ||||| |||||||||||||||||||    
T  41274 gggagcttaaaaatgaagatttagtgagaaaaaaagtcaaaactcccgagagca 41327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 2300 - 2223
Alignment:
Q  380 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    |||||| ||||||||| |||||| || | ||| | | |||||||||||||||| | |||||||||| |||||||||||    
T  2300 tgattgttgatttatgtataatttcactcaaacaaattatacaagttgttggaattcattgtcaaaggttgttgtgtc 2223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 27383 - 27452
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||| ||||||||  ||||||| |||||    
T  27383 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccaagagcagcctttttctgttcgcc 27452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 882 - 830
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||    
T  882 gggagcttagaattgaagttttagtgagaaaaatgtcaaaactcccgagagca 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 5518 - 5570
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||| ||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  5518 gggagtttagaattgaagatttagtgagaaaaatgtcaaaactcccgagagca 5570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 15122 - 15174
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| |||| || ||| ||||||| ||||||||||||||||||||||||||||    
T  15122 gggaacttagaattgatgatttagtgagaaaaatgtcaaaactcccgagagca 15174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 10920 - 10868
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| ||||||| |||||||||| |||||||||||||||||    
T  10920 gggagcttagaattgatgatttagtgagaaaaatgccaaaactcccgagagca 10868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 42551 - 42603
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||   |||||  |||||||||||||||||||||||||||    
T  42551 gggagcttaaaaatgaaattttagtaagaaaaatgtcaaaactcccgagagca 42603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 53246 - 53298
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||||||||||   |||||  |||||||||||||||||||||||||||    
T  53246 gggagcttaaaaatgaaattttagtaagaaaaatgtcaaaactcccgagagca 53298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 370937 - 370885
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||  ||||||||    
T  370937 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaactttcgagagca 370885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 24777 - 24726
Alignment:
Q  105 ggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||| || ||||||| ||| |||||||||||||||| |||||||||||    
T  24777 ggagcttagaattgaggatctagtgagaaaaatgtcaaaattcccgagagca 24726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 14575 - 14525
Alignment:
Q  106 gagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||| || ||||||| ||| |||||||||||||||| |||||||||||    
T  14575 gagcttagaattgaggatctagtgagaaaaatgtcaaaattcccgagagca 14525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 15494 - 15456
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaa 142  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  15494 gggagcttaaaaatgaagatttagtgagaaaaatgtcaa 15456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 457
Target Start/End: Original strand, 1792 - 1873
Alignment:
Q  375 attgttgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    ||||||||||| ||||||||| |||||  || ||||||| | ||||||| |||||||||| |||| || || |||||||||||    
T  1792 attgttgattgttgatttatgtataata-cacttaaataaattatacaaattgttggatttcattatcgaaggttgttgtgtc 1873  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 101300 - 101350
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagag 154  Q
    ||||||||| || ||||| || || ||||||||||||||||||||||||||    
T  101300 gggagcttagaattgaggtttgagtgagaaaaatgtcaaaactcccgagag 101350  T

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Target: scaffold0947 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 3787 - 3828
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaac 145  Q
    |||| ||||||||||| ||||||| |||||||||||||||||    
T  3787 gggaacttaaaaatgaagatttagtgagaaaaatgtcaaaac 3828  T

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Target: scaffold0672 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 8258 - 8335
Alignment:
Q  380 tgattgctgatttatgcataattgcatttaaatagaatatacaagttgttggattccattgtcaaaagttgttgtgtc 457  Q
    |||||| ||||||||| |||||| || | ||| | | |||||||||||||||| | ||||||| || |||||||||||    
T  8258 tgattgttgatttatgtataatttcactcaaacaaattatacaagttgttggaattcattgtcgaaggttgttgtgtc 8335  T

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Target: scaffold0323 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 7809 - 7740
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagcagcaattttctgctcgcc 173  Q
    ||||||||| || ||  ||||||| ||| ||||| ||||||||||||||||||||  ||||||| |||||    
T  7809 gggagcttagaattgtagatttagtgaggaaaatatcaaaactcccgagagcagcctttttctgttcgcc 7740  T

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Target: scaffold0297 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 1386 - 1438
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||| ||||||||||  ||||||||||| ||||    
T  1386 gggagcttaaaaatgaagttttagtgagaaaaatgataaaactcccgaaagca 1438  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 6397 - 6449
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    |||||||||||||||| | ||||  |||||||||||  |||||||||||||||    
T  6397 gggagcttaaaaatgaagttttaatgagaaaaatgtttaaactcccgagagca 6449  T

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Target: scaffold0158 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14956 - 14904
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  14956 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 14904  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 41755 - 41703
Alignment:
Q  104 gggagcttaaaaatgaggatttagggagaaaaatgtcaaaactcccgagagca 156  Q
    ||||||||| || ||| | || || ||||||||||||||||||||||||||||    
T  41755 gggagcttagaattgaagtttgagtgagaaaaatgtcaaaactcccgagagca 41703  T

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