View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8349_low_10 (Length: 510)

Name: NF8349_low_10
Description: NF8349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8349_low_10
NF8349_low_10
[»] chr8 (16 HSPs)
chr8 (23-495)||(9475788-9476253)
chr8 (317-495)||(28345330-28345517)
chr8 (317-483)||(5700207-5700382)
chr8 (329-430)||(29918520-29918621)
chr8 (317-495)||(8545411-8545598)
chr8 (328-424)||(30903965-30904061)
chr8 (346-430)||(12468309-12468393)
chr8 (336-430)||(6388586-6388680)
chr8 (331-416)||(17108303-17108388)
chr8 (328-368)||(14186295-14186335)
chr8 (319-430)||(36274956-36275066)
chr8 (330-384)||(14155491-14155545)
chr8 (441-491)||(17084304-17084354)
chr8 (317-363)||(30481483-30481529)
chr8 (317-362)||(24870086-24870131)
chr8 (317-357)||(8031124-8031164)
[»] chr5 (22 HSPs)
chr5 (328-495)||(17153008-17153184)
chr5 (330-435)||(12457425-12457530)
chr5 (317-412)||(29664902-29664997)
chr5 (330-487)||(40187732-40187898)
chr5 (317-426)||(27900464-27900573)
chr5 (318-495)||(7350471-7350657)
chr5 (330-435)||(8020523-8020628)
chr5 (328-387)||(32575012-32575071)
chr5 (319-416)||(6810085-6810182)
chr5 (317-362)||(27088415-27088460)
chr5 (347-435)||(35584025-35584112)
chr5 (333-391)||(16366526-16366585)
chr5 (345-416)||(24207614-24207685)
chr5 (317-368)||(38006532-38006583)
chr5 (317-391)||(16311356-16311430)
chr5 (317-486)||(38972770-38972948)
chr5 (317-362)||(10127062-10127107)
chr5 (317-358)||(12712620-12712661)
chr5 (317-362)||(22694964-22695009)
chr5 (322-362)||(3573205-3573245)
chr5 (318-362)||(4920807-4920851)
chr5 (330-362)||(35194065-35194097)
[»] chr4 (30 HSPs)
chr4 (317-485)||(42907742-42907918)
chr4 (330-433)||(8843880-8843983)
chr4 (330-433)||(8856844-8856947)
chr4 (328-487)||(33616189-33616357)
chr4 (336-435)||(36306699-36306798)
chr4 (332-430)||(9929245-9929343)
chr4 (328-422)||(36919050-36919144)
chr4 (328-493)||(37926408-37926580)
chr4 (330-435)||(21714051-21714156)
chr4 (330-430)||(53906757-53906855)
chr4 (336-428)||(12075713-12075805)
chr4 (317-416)||(33516135-33516234)
chr4 (318-416)||(25298897-25298994)
chr4 (328-416)||(37384206-37384293)
chr4 (331-391)||(40420662-40420722)
chr4 (317-428)||(21956877-21956987)
chr4 (327-410)||(50376424-50376507)
chr4 (317-391)||(25941096-25941170)
chr4 (317-362)||(19534442-19534487)
chr4 (331-430)||(3505187-3505286)
chr4 (347-430)||(25265240-25265322)
chr4 (317-359)||(1724373-1724415)
chr4 (436-486)||(9281080-9281130)
chr4 (330-412)||(12505606-12505688)
chr4 (337-391)||(24474524-24474578)
chr4 (443-493)||(25265344-25265394)
chr4 (328-362)||(37349110-37349144)
chr4 (317-358)||(11172960-11173001)
chr4 (317-362)||(47550416-47550461)
chr4 (378-426)||(39086079-39086127)
[»] chr2 (17 HSPs)
chr2 (317-483)||(35248447-35248618)
chr2 (328-487)||(35965182-35965351)
chr2 (328-430)||(25210291-25210393)
chr2 (317-430)||(30696838-30696951)
chr2 (328-416)||(13954673-13954761)
chr2 (328-416)||(14095880-14095968)
chr2 (373-435)||(31600886-31600948)
chr2 (319-381)||(4961515-4961577)
chr2 (317-495)||(34214719-34214905)
chr2 (330-412)||(34544386-34544468)
chr2 (319-416)||(13531877-13531974)
chr2 (336-404)||(37309812-37309880)
chr2 (334-495)||(35409234-35409401)
chr2 (348-435)||(40734677-40734763)
chr2 (328-416)||(17845464-17845553)
chr2 (318-358)||(4427910-4427950)
chr2 (318-362)||(19104904-19104948)
[»] scaffold0244 (1 HSPs)
scaffold0244 (348-429)||(4673-4754)
[»] chr1 (21 HSPs)
chr1 (318-413)||(48125746-48125841)
chr1 (317-491)||(16903365-16903550)
chr1 (330-487)||(42729019-42729185)
chr1 (317-430)||(39219172-39219285)
chr1 (329-430)||(41477026-41477127)
chr1 (328-429)||(8880363-8880464)
chr1 (331-430)||(36421680-36421779)
chr1 (335-430)||(5293490-5293585)
chr1 (317-359)||(12494995-12495037)
chr1 (441-495)||(13692484-13692538)
chr1 (328-410)||(33293593-33293675)
chr1 (330-435)||(23719512-23719616)
chr1 (330-362)||(29871360-29871392)
chr1 (444-495)||(14891002-14891053)
chr1 (444-495)||(14902980-14903031)
chr1 (330-428)||(43513104-43513202)
chr1 (317-359)||(49741069-49741111)
chr1 (317-362)||(9982952-9982997)
chr1 (317-362)||(29936398-29936443)
chr1 (318-359)||(49250836-49250877)
chr1 (317-362)||(51421840-51421885)
[»] chr6 (17 HSPs)
chr6 (328-495)||(9402428-9402604)
chr6 (328-426)||(13768989-13769087)
chr6 (328-428)||(1947864-1947964)
chr6 (331-493)||(34346081-34346261)
chr6 (318-435)||(10925506-10925623)
chr6 (328-430)||(256565-256668)
chr6 (444-495)||(2126819-2126870)
chr6 (441-495)||(1947986-1948040)
chr6 (317-359)||(5863445-5863487)
chr6 (328-430)||(8320868-8320970)
chr6 (334-416)||(14321794-14321876)
chr6 (330-360)||(29341239-29341269)
chr6 (317-362)||(12141366-12141411)
chr6 (442-483)||(20348916-20348957)
chr6 (317-362)||(24602918-24602963)
chr6 (317-362)||(27738753-27738798)
chr6 (317-362)||(32853825-32853870)
[»] chr3 (14 HSPs)
chr3 (336-430)||(37032179-37032273)
chr3 (317-428)||(30904877-30904988)
chr3 (329-430)||(3414607-3414708)
chr3 (444-495)||(40890203-40890254)
chr3 (441-495)||(27252407-27252460)
chr3 (441-495)||(34592995-34593049)
chr3 (330-384)||(42243346-42243400)
chr3 (385-430)||(38347525-38347570)
chr3 (317-362)||(39728652-39728697)
chr3 (317-362)||(44172607-44172652)
chr3 (317-362)||(44179307-44179352)
chr3 (317-362)||(49580045-49580090)
chr3 (348-416)||(27937666-27937734)
chr3 (318-362)||(30682802-30682846)
[»] chr7 (16 HSPs)
chr7 (317-430)||(19440072-19440186)
chr7 (328-414)||(29292636-29292722)
chr7 (317-429)||(23475325-23475438)
chr7 (334-435)||(36251009-36251110)
chr7 (330-483)||(11472788-11472949)
chr7 (330-435)||(43550491-43550595)
chr7 (328-428)||(3773989-3774089)
chr7 (317-430)||(23533665-23533780)
chr7 (328-362)||(27850399-27850433)
chr7 (445-495)||(37217848-37217898)
chr7 (343-436)||(31345438-31345531)
chr7 (331-391)||(3157040-3157100)
chr7 (453-495)||(8265672-8265714)
chr7 (317-362)||(3920524-3920569)
chr7 (317-362)||(16866155-16866200)
chr7 (317-362)||(23328596-23328641)
[»] scaffold1322 (1 HSPs)
scaffold1322 (334-416)||(1038-1120)
[»] scaffold0157 (1 HSPs)
scaffold0157 (330-412)||(14789-14871)


Alignment Details
Target: chr8 (Bit Score: 319; Significance: 1e-180; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 23 - 495
Target Start/End: Original strand, 9475788 - 9476253
Alignment:
Q  23 acgtacacatgcaattgttgttcacttcctgtggtttaaagtttgaacacatggacctcatcactttccagctctttggcacacatcccattcactttta 122  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9475788 acgtacacatgcaattgttgttcacttcttgtggtttaaagtttgaacacatggacctcatcactttccagctctttggcacacatcccattcactttta 9475887  T
Q  123 cccattgccttcaaaaggcatcaaggtttacctctaggcatgacaacaaaatctatatttgtgggtatccgtccgaattaaacccattttgacggannnn 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| || ||||||||||||||||  ||||||||||| |||          
T  9475888 cccattgccttcaaaaggcatcaaggtttacctctaggcatgacaacaaaacatatacttctgggtatccgtccgaaccaaacccattttaacgagtttt 9475987  T
Q  223 nnncgtttcgattggatttggatatggatatggattttcccccgatttcaaacaatagatacgggacaagtaacggggnnnnnnnnnnnnnnnncccacc 322  Q
        |||||||||| ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||                ||||||    
T  9475988 tcttgtttcgattgaatttggatatggatatggattttcccccgatttcaaaaaacggatacgggacaagtaacgggg-------atataaatacccacc 9476080  T
Q  323 tcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagt 422  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9476081 tcgaacccatacccaaacccatcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcacacagt 9476180  T
Q  423 cagagtcttagtcacatgcacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9476181 cagagtcttagtcacacacacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 9476253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 495
Target Start/End: Complemental strand, 28345517 - 28345330
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||| |||||||||||||  |||| ||||||||||||| ||  ||||||||||| ||||||||||||||  |||| ||||||| ||||||||||    
T  28345517 cccaccccgaacccatacccaaacttgtcctgaatgtagaaaataaatatattaccccttttatataaatagaaaccgaaattctaaatcatttcactca 28345418  T
Q  417 aacagtcagagtcttag----tcacatg-----cacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
     ||||||| ||||| ||    ||| |||     ||||||||||||||||||||||||| |||||| |||||||||| | |||||||||    
T  28345417 cacagtcatagtctcagtatttcagatgacactcacttatcatagttctctcttatctccttccatatctcacacttttgacctctct 28345330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 317 - 483
Target Start/End: Complemental strand, 5700382 - 5700207
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||||||| |||||||||||| || ||||||||||| |||||||| || ||||||||| ||||||||| ||||  |||||||||||| |||||||||     
T  5700382 cccacctcgaacccatacccaaatccatcccgaatgtataaaattaattttttaccccttttatataaattgaaaccgaaactctaaatcatttcactcc 5700283  T
Q  417 aacagtcagagtcttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacact 483  Q
     | ||||||||||||||||         |||  ||||||||||| ||||||||||||| ||| || ||||||||||    
T  5700282 catagtcagagtcttagtcttttagatgacagtcacttatcataattctctcttatctcctttcatatctcacact 5700207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 430
Target Start/End: Complemental strand, 29918621 - 29918520
Alignment:
Q  329 ccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagt 428  Q
    |||||| |||||||||||| |||||| ||||| || |||||||| ||| |||||||||||||| | |||| |||||| |||||||||| ||||| |||||    
T  29918621 ccatacacaaacccgtcccaaatgtaaaaaatcaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcactcacacagttagagt 29918522  T
Q  429 ct 430  Q
    ||    
T  29918521 ct 29918520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 495
Target Start/End: Original strand, 8545411 - 8545598
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||| ||||||| ||||| |||||| |||||||||||| || |||  || |||| |||||||| ||||||  |||| |||||| ||||||||||    
T  8545411 cccaccccgaacccatactcaaactcgtcccaaatgtagaaaatcaatttacaactccttttatataaacagaaatccaaaccctaaatcatttcactca 8545510  T
Q  417 aacagtcagagtcttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    || || ||||||||  |||         |||  ||||||||||| ||||||||| ||| |||||| |||||||| |||| ||||||||    
T  8545511 aatagccagagtctcggtctttcaaatgacactcacttatcataattctctcttttctccttccatatctcacattctcaacctctct 8545598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 424
Target Start/End: Complemental strand, 30904061 - 30903965
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtca 424  Q
    |||||||||||| | |||||||||||||||||| || ||||||| | || ||||||||||||||   ||||  ||||| |||||||||| |||||||    
T  30904061 cccatacccaaatcagtcccgaatgtagaaaatcaatttattacacattttatataaatagaaaccaaaaccttaaatcatttcactcacacagtca 30903965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 430
Target Start/End: Original strand, 12468309 - 12468393
Alignment:
Q  346 ccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtct 430  Q
    ||||||||||||||| || ||||||||| || |||||||| |||||   |||  ||||||||||||||||| || ||||||||||    
T  12468309 ccgaatgtagaaaatcaacttattaccctttttatataaagagaaacgcaaatcctaaattatttcactcatactgtcagagtct 12468393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 6388586 - 6388680
Alignment:
Q  336 caaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtct 430  Q
    ||||||| ||| ||||||||||||| || ||||||||| || |||||||| |||||   |||| |||||| |||||||||| ||| | |||||||    
T  6388586 caaacccatcctgaatgtagaaaatcaatttattacccattttatataaacagaaacccaaaccctaaatcatttcactcacacaattagagtct 6388680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 416
Target Start/End: Complemental strand, 17108388 - 17108303
Alignment:
Q  331 atacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||||||| | |||||| |||| ||||| || |||||| || || |||||||||||||| | |||| |||||| ||||||||||    
T  17108388 atacccaaactcatcccgattgtaaaaaatcaatttattatccattttatataaatagaaacttaaaccctaaataatttcactca 17108303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 368
Target Start/End: Complemental strand, 14186335 - 14186295
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattat 368  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  14186335 cccatacccaaacccgtcctgaatgtagaaaattaatttat 14186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 430
Target Start/End: Complemental strand, 36275066 - 36274956
Alignment:
Q  319 cacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaa 418  Q
    |||| ||| |||||||| ||||  |||||||||||| ||||| || ||| || ||||| ||||||||||||||    ||| |||||| |||||||||| |    
T  36275066 caccccgaacccatacctaaacatgtcccgaatgtaaaaaatcaatttactatcccttttatataaatagaaa-cccaaccctaaatcatttcactcaca 36274968  T
Q  419 cagtcagagtct 430  Q
    |||||| |||||    
T  36274967 cagtcaaagtct 36274956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 14155545 - 14155491
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataa 384  Q
    ||||||||||||| |||  |||||||||||| || |||||||||||| |||||||    
T  14155545 catacccaaacccatcctaaatgtagaaaatcaatttattaccccttttatataa 14155491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 491
Target Start/End: Original strand, 17084304 - 17084354
Alignment:
Q  441 cacttatcatagttctctcttatctacttccacatctcacactctcgacct 491  Q
    |||||||||||||| |||||| ||| |||||| || |||||||||||||||    
T  17084304 cacttatcatagttatctcttttctccttccatatttcacactctcgacct 17084354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 363
Target Start/End: Original strand, 30481483 - 30481529
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaa 363  Q
    |||||| ||| ||||||||||||| ||||||||||||| ||||||||    
T  30481483 cccaccccgaacccatacccaaactcgtcccgaatgtaaaaaattaa 30481529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 24870086 - 24870131
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| |||||||||||| ||||||||||| |||||| |||||||    
T  24870086 cccaccccgagcccatacctaaacccgtcccaaatgtaaaaaatta 24870131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 8031164 - 8031124
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaa 357  Q
    |||||||||| |||||||||||||||  |||||||||||||    
T  8031164 cccacctcgaacccatacccaaaccctacccgaatgtagaa 8031124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 495
Target Start/End: Complemental strand, 17153184 - 17153008
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagag 427  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| || ||||||||||||  |||  |||||| |||||||||| |||||||||     
T  17153184 cccatacccaaacccgtcccgaatgtagaaaatcaatttattaccccttctagataaatagaaatccaaaacctaaataatttcactcacacagtcagat 17153085  T
Q  428 tcttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
     || ||||         | || |||||||||||||||||| || ||| |||||| |||||||||||||| |||||||    
T  17153084 actcagtctttcaaatgagattcacttatcatagttctctattttcttcttccatatctcacactctcgccctctct 17153008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 330 - 435
Target Start/End: Complemental strand, 12457530 - 12457425
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||  |||||||||||||   ||| ||||||| |||||||||| ||| |||  |||    
T  12457530 catacccaaacccgtcccgaatgtagaaaatcaatttattacccctttaatataaatagaaacctaaagtctaaatcatttcactcacacaatcatggtc 12457431  T
Q  430 ttagtc 435  Q
    ||||||    
T  12457430 ttagtc 12457425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 29664997 - 29664902
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttca 412  Q
    ||||| |||| | ||||||||||||||||||||||||| ||||| || ||| |||||||| ||| |||||||||| | ||||||||||| ||||||    
T  29664997 cccacttcgaactcatacccaaacccgtcccgaatgtacaaaatcaatttactaccccttttatttaaatagaaactcaaactctaaatcatttca 29664902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 487
Target Start/End: Original strand, 40187732 - 40187898
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    ||||||||||| |||||||||| ||||||||||| |||||||| ||| ||||||||||| |||  |||  |||||| |||| ||||| | |||||||||     
T  40187732 catacccaaactcgtcccgaatatagaaaattaatttattacctcttttatataaatagtaatgaaaatcctaaatcattttactcacatagtcagagtt 40187831  T
Q  430 ttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacactctcg 487  Q
    | | ||         |||  |||||||||||||||||||||||||  ||||| ||||||||||||||    
T  40187832 tcaatctttcagatgacactcacttatcatagttctctcttatctcattccatatctcacactctcg 40187898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 317 - 426
Target Start/End: Original strand, 27900464 - 27900573
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||| ||||| |||||||||||| ||| |||||||||| ||||| || ||||| || ||| |||||||||||||| |||||| |||||| |||||| |||    
T  27900464 cccatctcgaacccatacccaaatccgccccgaatgtataaaatcaatttatttcctcttttatataaatagaaactgaaaccctaaatcatttcagtca 27900563  T
Q  417 aacagtcaga 426  Q
     ||| |||||    
T  27900564 cacattcaga 27900573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 495
Target Start/End: Original strand, 7350471 - 7350657
Alignment:
Q  318 ccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaa 417  Q
    ||||| ||| |||||||  ||||||||| | ||||||||||||||| |||||| | ||| ||||||||||| ||| ||||| |||||| |||| |||||     
T  7350471 ccaccccgaacccatacttaaacccgtctcaaatgtagaaaattaatttattatcgcttttatataaatagtaatcgaaaccctaaatcattttactcac 7350570  T
Q  418 acagtcagagtcttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    | ||| ||||||  | ||         ||   ||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||    
T  7350571 atagttagagtcgcaatctttgagacgacgctcacttatcatagttctctcttatctccttccatatctcacattctcgacccctct 7350657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 435
Target Start/End: Complemental strand, 8020628 - 8020523
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    ||||| ||||||||| | ||||||||||||| || ||| |||||||| ||||||||   |||   |||| |||||||||| |||||||||||||||||||    
T  8020628 catacgcaaacccgttctgaatgtagaaaatcaatttactaccccttttatataaaggaaaacctaaaccctaaattattccactcaaacagtcagagtc 8020529  T
Q  430 ttagtc 435  Q
    | ||||    
T  8020528 tcagtc 8020523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 32575012 - 32575071
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaata 387  Q
    |||| ||||||||||| ||||||||||||| || || |||||||||||| ||||||||||    
T  32575012 cccaaacccaaacccgccccgaatgtagaatatcaatttattaccccttttatataaata 32575071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 416
Target Start/End: Complemental strand, 6810182 - 6810085
Alignment:
Q  319 cacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||| ||| ||||||||||||||| |||||||||  |||||| || ||||| |||||| ||||| ||||||||   ||||  ||||| ||||||||||    
T  6810182 caccccgaacccatacccaaacccatcccgaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactca 6810085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 27088415 - 27088460
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||| ||||||||||||||||    
T  27088415 cccaccccgaacccatacccaaacccgtctcgaatgtagaaaatta 27088460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 435
Target Start/End: Complemental strand, 35584112 - 35584025
Alignment:
Q  347 cgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtcttagtc 435  Q
    |||||||| ||||| || ||||||||| || |||||||||||||| | |||| |||||| ||||  |||| ||||||||||||| ||||    
T  35584112 cgaatgtacaaaatcaatttattacccttt-tatataaatagaaactcaaaccctaaatcattttgctcacacagtcagagtctcagtc 35584025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 16366526 - 16366585
Alignment:
Q  333 acccaaacccgtcccgaatgtagaaaattaaattattac-cccttatatataaatagaaa 391  Q
    |||||||| |||||||||||||||||||||  ||||||| ||||| |||||||| |||||    
T  16366526 acccaaactcgtcccgaatgtagaaaattattttattactcccttttatataaaaagaaa 16366585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 24207685 - 24207614
Alignment:
Q  345 cccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    ||||||||||||||||||| ||||||  |||| |||||||||| ||| | |||| |||||| | ||||||||    
T  24207685 cccgaatgtagaaaattaatttattaatccttttatataaataaaaactaaaaccctaaataacttcactca 24207614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 38006532 - 38006583
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattat 368  Q
    |||||| ||| |||||||||||| ||||||||||||| ||||||||| ||||    
T  38006532 cccaccccgaacccatacccaaatccgtcccgaatgttgaaaattaatttat 38006583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 16311356 - 16311430
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaa 391  Q
    |||||| ||| ||||||  |||||| ||| ||||||| |||||| || |||||| ||||| ||||||||||||||    
T  16311356 cccaccccgaacccatattcaaacctgtctcgaatgttgaaaatcaatttattatcccttttatataaatagaaa 16311430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 486
Target Start/End: Complemental strand, 38972948 - 38972770
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||| ||||||| ||||||| || | |||| | ||||| || |||||| ||||| ||||||||| |||| |||||| |||||| |||| | |||    
T  38972948 cccaccccgaacccatactcaaacccatctcaaatgcataaaatcaatttattaacccttttatataaatcgaaactgaaaccctaaatcatttgattca 38972849  T
Q  417 aacagtcagagtcttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacactctc 486  Q
     || || ||||||| | ||         |||  ||||||||||||||||||||||||| ||| || || ||||||||||    
T  38972848 cactgttagagtctaaatctttcatatgacactcacttatcatagttctctcttatctcctttcatatatcacactctc 38972770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 10127107 - 10127062
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  10127107 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 10127062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 12712620 - 12712661
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaa 358  Q
    |||||||||| |||||||||||||||  ||||||||||||||    
T  12712620 cccacctcgaacccatacccaaaccctacccgaatgtagaaa 12712661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 22694964 - 22695009
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  22694964 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 22695009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 3573245 - 3573205
Alignment:
Q  322 ctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    ||||| ||||||| ||||||| |||||||||||||||||||    
T  3573245 ctcgaacccatactcaaacccctcccgaatgtagaaaatta 3573205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 4920851 - 4920807
Alignment:
Q  318 ccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    ||||| ||| |||||||||||||||||||| |||||| |||||||    
T  4920851 ccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 4920807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 35194065 - 35194097
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaatta 362  Q
    ||||| |||||||||||||||||||||||||||    
T  35194065 catactcaaacccgtcccgaatgtagaaaatta 35194097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 317 - 485
Target Start/End: Complemental strand, 42907918 - 42907742
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| || ||| || | ||| |||||||||||||| | |||| |||||| ||||||||||    
T  42907918 cccaccccgagcccatacccaaactcgtcccgaatgtagaaaatcaatttacta-ctcttttatataaatagaaactcaaaccctaaatcatttcactca 42907820  T
Q  417 aacagtcagagtcttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacactct 485  Q
     ||||| ||||||||||||         |||  |||||||||||||||| |||| ||| |||||| ||||||||||||    
T  42907819 tacagttagagtcttagtctttcagatgacacacacttatcatagttctatcttttctccttccatatctcacactct 42907742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 330 - 433
Target Start/End: Original strand, 8843880 - 8843983
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||  ||||||||||||| | |||  |||||| |||||||||| ||||||| ||||    
T  8843880 catacccaaacccgtcgtgaatgtagaaaattaatttattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtc 8843979  T
Q  430 ttag 433  Q
    ||||    
T  8843980 ttag 8843983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 330 - 433
Target Start/End: Original strand, 8856844 - 8856947
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||  ||||||||||||| | |||  |||||| |||||||||| ||||||| ||||    
T  8856844 catacccaaacccgtcgtgaatgtagaaaattaatttattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtc 8856943  T
Q  430 ttag 433  Q
    ||||    
T  8856944 ttag 8856947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 328 - 487
Target Start/End: Original strand, 33616189 - 33616357
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagag 427  Q
    |||||||| ||||| | || ||||||||||||| || |||||||||||| |||||||||| ||||  |||| |||||| |||||||||| ||||||||||    
T  33616189 cccataccaaaacctgccctgaatgtagaaaatcaatttattaccccttttatataaataaaaatcaaaaccctaaatcatttcactcacacagtcagag 33616288  T
Q  428 tctta----gtcacatg-----cacttatcatagttctctcttatctacttccacatctcacactctcg 487  Q
    |||||     ||| |||     ||||||||||||||||||||| ||| | |||| ||||||||||||||    
T  33616289 tcttaatatttcatatgacactcacttatcatagttctctcttttctccatccatatctcacactctcg 33616357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 435
Target Start/End: Complemental strand, 36306798 - 36306699
Alignment:
Q  336 caaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtcttagtc 435  Q
    ||||||||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||   ||||| |||||||| | ||| | ||||||| ||||    
T  36306798 caaacccgtcccgaatgtagaaaatcaatttattaccccttttatataaatagaaatcgaaatcataaatcatttcacttacacaattagagtctcagtc 36306699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 9929245 - 9929343
Alignment:
Q  332 tacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtct 430  Q
    ||||||||  ||||| ||| ||||||||| || |||||||| |||  ||||||||| ||| ||||||||||||| |||||||||| |||||||||||||    
T  9929245 tacccaaaatcgtcctgaaagtagaaaatcaatttattacctcttccatataaatataaactgaaactctaaataatttcactcacacagtcagagtct 9929343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 36919144 - 36919050
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagt 422  Q
    ||||||||||||| ||| ||| ||||||||||| |  |||||||| ||| |||||||||||||| | ||||||||||| |||||||||| |||||    
T  36919144 cccatacccaaactcgttccggatgtagaaaatcagtttattaccacttttatataaatagaaactcaaactctaaatcatttcactcacacagt 36919050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 493
Target Start/End: Complemental strand, 37926580 - 37926408
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagag 427  Q
    ||||||||||||| | ||| |||||||| ||||||| |||||| |||||  |||| ||| |||| | ||||| ||||| |||| ||||| ||||| | ||    
T  37926580 cccatacccaaactcatcctgaatgtagtaaattaatttattatccctttcatatcaattgaaactcaaactttaaatcatttaactcacacagttaaag 37926481  T
Q  428 tcttagtc-------acatgcacttatcatagttctctcttatctacttccacatctcacactctcgacctct 493  Q
    ||| ||||       |||  |||||||||||||||||| || ||| |||||| ||||||||||||||||||||    
T  37926480 tctcagtctttgatgacagtcacttatcatagttctctattttctccttccatatctcacactctcgacctct 37926408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 435
Target Start/End: Original strand, 21714051 - 21714156
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    |||||| |||| |||| | ||||||||||||||| |||||||| ||| |||||||||||||| | |||| |||||| |||||||| | ||| | ||||||    
T  21714051 catacctaaactcgtctcaaatgtagaaaattaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcacttacacaattagagtc 21714150  T
Q  430 ttagtc 435  Q
    | ||||    
T  21714151 tcagtc 21714156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 430
Target Start/End: Original strand, 53906757 - 53906855
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    |||||| ||||||||||| ||||||||||  | || ||||||||||| ||||||||||||||| |||||  ||| |||||||||||| | ||||| ||||    
T  53906757 catacctaaacccgtcccaaatgtagaaa--tcaaatattaccccttttatataaatagaaatcgaaaccttaagttatttcactcacatagtcaaagtc 53906854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 428
Target Start/End: Original strand, 12075713 - 12075805
Alignment:
Q  336 caaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagt 428  Q
    ||||| ||||| ||||||||||||| || ||||||||| || |||||||||||||| | ||||||| ||| ||||||| || ||||| |||||    
T  12075713 caaactcgtccggaatgtagaaaatcaatttattacccattttatataaatagaaactaaaactctgaatcatttcacccacacagttagagt 12075805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 416
Target Start/End: Original strand, 33516135 - 33516234
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||| || ||||||||||||||| | |||||| ||||| ||  ||||||||||| |||||||||| ||| | |||| |||||| ||||||||||    
T  33516135 cccaccccgaacctatacccaaacccgtctcaaatgtaaaaaatcaatgtattaccccttttatataaataaaaactcaaaccctaaatcatttcactca 33516234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 416
Target Start/End: Original strand, 25298897 - 25298994
Alignment:
Q  318 ccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    ||||| ||| ||||||||||||||||| || ||||| |||||| || |||| ||||||| | ||||||||| || | ||||||||||| ||||||||||    
T  25298897 ccaccccgaacccatacccaaacccgtaccaaatgttgaaaatcaatttatcaccccttttttataaatag-aactcaaactctaaatcatttcactca 25298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 416
Target Start/End: Complemental strand, 37384293 - 37384206
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    ||||||| |||||||||||| ||| |||||| | || |||||| ||||| ||||||||||||| || |||| |||||| ||||||||||    
T  37384293 cccatacacaaacccgtcccaaatatagaaa-tcaatttattatcccttttatataaatagaagttcaaaccctaaatcatttcactca 37384206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 40420662 - 40420722
Alignment:
Q  331 atacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaa 391  Q
    ||||||||||||  |||||||||||||||| |  |||||||||||| ||||||||||||||    
T  40420662 atacccaaacccaccccgaatgtagaaaatcactttattaccccttttatataaatagaaa 40420722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 428
Target Start/End: Original strand, 21956877 - 21956987
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||| ||||||||||||| |||  |||||||||||||| || |||||| ||||| |||||||||| |||   |||| |||||| |||||| ||     
T  21956877 cccaccccgaacccatacccaaactcgttacgaatgtagaaaatcaatttatta-cccttttatataaataaaaacccaaaccctaaatcatttcattcg 21956975  T
Q  417 aacagtcagagt 428  Q
     |||||||||||    
T  21956976 cacagtcagagt 21956987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 50376424 - 50376507
Alignment:
Q  327 gcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattattt 410  Q
    ||||| |||| ||||||| ||||||||||||||| || |||||  || || |||||||||||||| | |||| |||||||||||    
T  50376424 gcccacacccgaacccgttccgaatgtagaaaatcaatttattttccattttatataaatagaaactaaaacgctaaattattt 50376507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 25941170 - 25941096
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaa 391  Q
    |||||| ||| |||||||||||||  ||| || ||||||||||| || |||| ||||||| ||||||||||||||    
T  25941170 cccaccccgaacccatacccaaacatgtctcggatgtagaaaatcaatttataaccccttttatataaatagaaa 25941096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 19534487 - 19534442
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||    
T  19534487 cccacctcgaactcatacccaaacccgtcacgaatgtagaaaatta 19534442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 430
Target Start/End: Complemental strand, 3505286 - 3505187
Alignment:
Q  331 atacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtct 430  Q
    |||| |||||| || ||| || |||||||| || ||||||| |||| ||| |||||||||||| |||||||| || |||||| ||| || || |||||||    
T  3505286 atacacaaacctgttccgcatatagaaaatcaatttattactccttttatctaaatagaaattcaaactctagatcatttcattcacaccgttagagtct 3505187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 430
Target Start/End: Original strand, 25265240 - 25265322
Alignment:
Q  347 cgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtct 430  Q
    |||||||||||||| || |||||| || || |||||||||||||| | ||| ||||||| |||| ||||| ||| |||||||||    
T  25265240 cgaatgtagaaaatcaatttattatcc-ttctatataaatagaaactcaaattctaaatcattttactcacacaatcagagtct 25265322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 1724373 - 1724415
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaa 359  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||    
T  1724373 cccaccccgaacccatacccaaacccgtcccgaatgcagaaaa 1724415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 486
Target Start/End: Original strand, 9281080 - 9281130
Alignment:
Q  436 acatgcacttatcatagttctctcttatctacttccacatctcacactctc 486  Q
    |||| ||||||||||||| ||||||| ||| |||||| |||||||||||||    
T  9281080 acattcacttatcatagtactctcttttctccttccatatctcacactctc 9281130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 12505606 - 12505688
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttca 412  Q
    ||||||||||||||||| ||| ||| || || || ||||| |||||| |||||||||||||| | ||||  ||||| ||||||    
T  12505606 catacccaaacccgtcctgaaggtaaaacatcaatttatttccccttttatataaatagaaacttaaacattaaatcatttca 12505688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 391
Target Start/End: Original strand, 24474524 - 24474578
Alignment:
Q  337 aaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaa 391  Q
    |||| ||||||||||||| ||||| ||||| ||| ||||| ||||||||||||||    
T  24474524 aaactcgtcccgaatgtaaaaaatcaaatttttatcccttttatataaatagaaa 24474578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 493
Target Start/End: Original strand, 25265344 - 25265394
Alignment:
Q  443 cttatcatagttctctcttatctacttccacatctcacactctcgacctct 493  Q
    ||||||||||||||||||| ||| |||||| |||||||||| ||| |||||    
T  25265344 cttatcatagttctctcttttctccttccatatctcacactttcggcctct 25265394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 37349144 - 37349110
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    ||||||||||||||||||||||||| |||||||||    
T  37349144 cccatacccaaacccgtcccgaatgcagaaaatta 37349110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 358
Target Start/End: Complemental strand, 11173001 - 11172960
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaa 358  Q
    |||||| ||| ||||||||||||||| |||||||||||||||    
T  11173001 cccaccccgaacccatacccaaacccttcccgaatgtagaaa 11172960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 47550416 - 47550461
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  47550416 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 47550461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 39086127 - 39086079
Alignment:
Q  378 tatataaatagaaattgaaactctaaattatttcactcaaacagtcaga 426  Q
    |||||||||||||| | |||| |||||| |||||||||| |||||||||    
T  39086127 tatataaatagaaacttaaaccctaaatcatttcactcacacagtcaga 39086079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 317 - 483
Target Start/End: Original strand, 35248447 - 35248618
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||| ||||||||||||||||||| |||||||||||| || |    |||||||| |||||||||||||| |||||| |||||| ||||||||||    
T  35248447 cccaccccgaacccatacccaaacccgtcctgaatgtagaaaaatata----taccccttttatataaatagaaaatgaaaccctaaatcatttcactca 35248542  T
Q  417 aacagtcagagtcttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacact 483  Q
     |||| |||||||| ||||         |||  | ||||| ||||||||||||||||| |||||| ||||||||||    
T  35248543 cacagacagagtctcagtctttcaaatgacactcgcttattatagttctctcttatctccttccatatctcacact 35248618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 328 - 487
Target Start/End: Complemental strand, 35965351 - 35965182
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatata-taaatagaaattgaaactctaaattatttcactcaaacagtcaga 426  Q
    ||||||||||||||||||||||||||||||||| || ||||| |||||| |||| ||||||| ||||||| |  ||||| |||||||||| ||||| ||     
T  35965351 cccatacccaaacccgtcccgaatgtagaaaatcaatttattgccccttttatactaaataggaattgaatccataaatcatttcactcatacagtgagg 35965252  T
Q  427 gtcttag---------tcacatgcacttatcatagttctctcttatctacttccacatctcacactctcg 487  Q
     ||| ||         | |||| |||||||||||||||||| |||||| |||||| ||||||||||||||    
T  35965251 atctcagtttttcagataacattcacttatcatagttctcttttatctccttccatatctcacactctcg 35965182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 328 - 430
Target Start/End: Complemental strand, 25210393 - 25210291
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagag 427  Q
    |||||||| |||||| ||||||||||||||||| || || |||||| || |||||||||||||| | |||| |||||| |||||||||| |||||| |||    
T  25210393 cccataccaaaacccctcccgaatgtagaaaatcaatttgttacccattttatataaatagaaactcaaaccctaaatcatttcactcacacagtcggag 25210294  T
Q  428 tct 430  Q
    |||    
T  25210293 tct 25210291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 317 - 430
Target Start/End: Complemental strand, 30696951 - 30696838
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||| | ||||||||||||  |||| |||||| ||||| || ||||||||| || |||||||||||||||| |||| |||||| || |||||||    
T  30696951 cccaccccgaactcatacccaaacctatcccaaatgtaaaaaatcaatttattacccattttatataaatagaaattcaaaccctaaatcatgtcactca 30696852  T
Q  417 aacagtcagagtct 430  Q
     ||||| |||||||    
T  30696851 cacagttagagtct 30696838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 416
Target Start/End: Complemental strand, 13954761 - 13954673
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    ||||||| |||||||||| |||| ||||||||| || |||||||| ||| |||||||||||||| |  ||| |||||| ||||||||||    
T  13954761 cccatactcaaacccgtctcgaacgtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactca 13954673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 416
Target Start/End: Complemental strand, 14095968 - 14095880
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    ||||||| |||||||||| |||| ||||||||| || |||||||| ||| |||||||||||||| |  ||| |||||| ||||||||||    
T  14095968 cccatactcaaacccgtctcgaacgtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactca 14095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 373 - 435
Target Start/End: Original strand, 31600886 - 31600948
Alignment:
Q  373 ccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtcttagtc 435  Q
    |||| |||||||||||||| | ||||||||||| |||||||||| ||||| ||||||||||||    
T  31600886 ccttttatataaatagaaactcaaactctaaatcatttcactcatacagttagagtcttagtc 31600948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 4961515 - 4961577
Alignment:
Q  319 cacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatata 381  Q
    |||||||| ||||||||||||| |||||||||| |||||||| || |||||||| ||| ||||    
T  4961515 cacctcgaacccatacccaaactcgtcccgaatatagaaaatgaatttattacctcttttata 4961577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 495
Target Start/End: Original strand, 34214719 - 34214905
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    ||||| |||| | ||||| |||||||||||   ||||||||| | || ||||| |||  | |||||||||||||| | || |||||||| |||||||| |    
T  34214719 cccacttcgaactcatactcaaacccgtcctagatgtagaaagtcaatttattgccctgtttatataaatagaaactcaa-ctctaaatcatttcactaa 34214817  T
Q  417 aacagtcagagtcttag----tcacatg-----cacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
     ||||||||||||| ||    |||||||     ||||||||||||||| ||||| ||| |||| | |||||||||| ||| |||||||    
T  34214818 cacagtcagagtctcagtctttcacatgacactcacttatcatagttcgctcttttctccttcgatatctcacactttcggcctctct 34214905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 34544386 - 34544468
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttca 412  Q
    ||||| ||||||| |||||||||||||||||  | ||||||||| || |||||||||| ||| | |||| |||||| ||||||    
T  34544386 catactcaaacccctcccgaatgtagaaaatctatttattacccattttatataaataaaaactcaaaccctaaataatttca 34544468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 416
Target Start/End: Complemental strand, 13531974 - 13531877
Alignment:
Q  319 cacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||| ||| |||| || |||||||| |||  ||||||||||| || |||||| || || |||||||||||||| | |||| |||||| ||||||||||    
T  13531974 caccccgaacccacactcaaacccgccccacatgtagaaaatcaatttattatccattttatataaatagaaactcaaaccctaaatcatttcactca 13531877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 37309812 - 37309880
Alignment:
Q  336 caaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaa 404  Q
    ||||||||||||||| ||||||||| || |||| | ||||| || ||||||||||||| |||| |||||    
T  37309812 caaacccgtcccgaaggtagaaaatcaatttatcatcccttttacataaatagaaattcaaaccctaaa 37309880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 495
Target Start/End: Original strand, 35409234 - 35409401
Alignment:
Q  334 cccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtcttag 433  Q
    ||||||||||||| ||||||| ||||| || || |||||| |||||||  |||| |||   |||||||||| ||||||||| | ||||||||||||| ||    
T  35409234 cccaaacccgtcc-gaatgtataaaatcaattttttacccgttatata--aataaaaacccaaactctaaactatttcacttacacagtcagagtctcag 35409330  T
Q  434 tc---------acatgcacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    ||         |||  |||||||||||||||  |||| ||| | |||| |||||||||||||| |||||||    
T  35409331 tcttacatatgacactcacttatcatagttcattcttttcttcgtccatatctcacactctcggcctctct 35409401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 435
Target Start/End: Original strand, 40734677 - 40734763
Alignment:
Q  348 gaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtcttagtc 435  Q
    ||||| |||||||||| ||| |||| |||| ||||||||| |||   |||| |||||| |||||||||| ||||||||||||| ||||    
T  40734677 gaatgcagaaaattaatttactacctctta-atataaataaaaaccaaaaccctaaatcatttcactcacacagtcagagtctcagtc 40734763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 416
Target Start/End: Original strand, 17845464 - 17845553
Alignment:
Q  328 cccatacccaaacccgtcccgaatgt-agaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||||||||||||||| ||||||| | ||||| || |||||| || || |||||||||||||| |  ||  |||||| ||||||||||    
T  17845464 cccatacccaaacccgtctcgaatgtaaaaaaatcaatttattatcctttttatataaatagaaactccaaacctaaatcatttcactca 17845553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 4427950 - 4427910
Alignment:
Q  318 ccacctcgagcccatacccaaacccgtcccgaatgtagaaa 358  Q
    ||||||||| |||||||||||||||  ||||||||||||||    
T  4427950 ccacctcgaacccatacccaaaccctacccgaatgtagaaa 4427910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 19104904 - 19104948
Alignment:
Q  318 ccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||||||  |||||| ||||||||||||||||| |||||||||    
T  19104904 ccacctcgaatccatactcaaacccgtcccgaatgcagaaaatta 19104948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 348 - 429
Target Start/End: Original strand, 4673 - 4754
Alignment:
Q  348 gaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||  ||||||||||| |||||||||| ||||||||||||    
T  4673 gaatgtagaaaatcaaattataaccccttttatataaatagaaatcaaaactctaaatcatttcactcacacagtcagagtc 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 413
Target Start/End: Original strand, 48125746 - 48125841
Alignment:
Q  318 ccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcac 413  Q
    ||||| ||| ||||||||||||| |||| |||||||||||||| || ||| |||| ||| |||||||||||||| | |||||||||||||||||||    
T  48125746 ccaccccgaacccatacccaaactcgtcgcgaatgtagaaaatcaatttactaccgcttttatataaatagaaactcaaactctaaattatttcac 48125841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 491
Target Start/End: Complemental strand, 16903550 - 16903365
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaa--------ttattaccccttatatataaatagaaattgaaactctaaattat 408  Q
    |||||| ||| | ||||||||||||||||||||||||| ||||  |||        ||||| ||| || |||||||||| ||| | |||| |||||||||    
T  16903550 cccaccccgaactcatacccaaacccgtcccgaatgtaaaaaaaaaaaaaatcaatttattgccctttttatataaatataaactcaaaccctaaattat 16903451  T
Q  409 ttcactcaaacagtcagagtcttagtc---acatgcacttatcatagttctctcttatctacttccacatctcacactctcgacct 491  Q
    |||||||| ||| ||||||| | ||||   |||  ||||||||||||||||||||| ||| |||||| || |||||||||||||||    
T  16903450 ttcactcacacaatcagagtttcagtcttgacaatcacttatcatagttctctcttttctccttccatatttcacactctcgacct 16903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 330 - 487
Target Start/End: Original strand, 42729019 - 42729185
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    ||||||||||| ||| | ||||||||||||| || |||| | ||||| |||||||||||||| | | || |||||| |||||||||| ||||||||||||    
T  42729019 catacccaaacacgttctgaatgtagaaaataaatttatcatcccttttatataaatagaaacttatacactaaatcatttcactcacacagtcagagtc 42729118  T
Q  430 ttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacactctcg 487  Q
    | ||||         |||  ||||||||||||||||||||| ||| |||||| || |||||||||||    
T  42729119 tcagtctttcagataacacccacttatcatagttctctcttgtctccttccatatatcacactctcg 42729185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 430
Target Start/End: Complemental strand, 39219285 - 39219172
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||| ||||||||||||| ||| |  ||||||||||||||| |||||||| ||| |||||||||||||| | |||| |||||| ||||| ||||    
T  39219285 cccaccccgaacccatacccaaactcgttctaaatgtagaaaattaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcgctca 39219186  T
Q  417 aacagtcagagtct 430  Q
     ||||||| |||||    
T  39219185 cacagtcacagtct 39219172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 430
Target Start/End: Original strand, 41477026 - 41477127
Alignment:
Q  329 ccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagt 428  Q
    |||||||||||||||||||||| | ||||||| || || |||||| || |||||||| |||||| ||||| ||||||||||||| ||| ||||||| |||    
T  41477026 ccatacccaaacccgtcccgaaagcagaaaatcaatttgttaccctttttatataaagagaaatggaaaccctaaattatttcattcacacagtcaaagt 41477125  T
Q  429 ct 430  Q
    ||    
T  41477126 ct 41477127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 429
Target Start/End: Complemental strand, 8880464 - 8880363
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagag 427  Q
    |||||||||||||||||||| ||||   ||||| || |||||||||||| | |||||||||||| | ||||| ||||| |||||||||| | ||| ||||    
T  8880464 cccatacccaaacccgtcccaaatgctaaaaataaatttattaccccttttttataaatagaaactcaaactttaaatcatttcactcacaaagttagag 8880365  T
Q  428 tc 429  Q
    ||    
T  8880364 tc 8880363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 430
Target Start/End: Complemental strand, 36421779 - 36421680
Alignment:
Q  331 atacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtct 430  Q
    |||||||||| |||| ||||| |||||||| || |||||| ||||  |||||||||| ||| |  |||||||||| |||||| ||| |||||||||||||    
T  36421779 atacccaaactcgtctcgaatatagaaaatcaatttattatccctcttatataaataaaaactcgaactctaaatcatttcattcacacagtcagagtct 36421680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 5293490 - 5293585
Alignment:
Q  335 ccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtct 430  Q
    |||||| |||||||||||| |||| | || |||||| | ||| |||||||||||||| | |||||| ||| ||||||| ||| |||| ||||||||    
T  5293490 ccaaactcgtcccgaatgttgaaagtcaatttattatcacttttatataaatagaaactcaaactcaaaactatttcaatcacacagccagagtct 5293585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 12495037 - 12494995
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaa 359  Q
    |||||||||| |||||||||||||||||||| |||||||||||    
T  12495037 cccacctcgaacccatacccaaacccgtcccaaatgtagaaaa 12494995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 495
Target Start/End: Complemental strand, 13692538 - 13692484
Alignment:
Q  441 cacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    ||||||| ||||||||||||| ||| |||||| |||||||||||||| |||||||    
T  13692538 cacttattatagttctctcttttctccttccatatctcacactctcggcctctct 13692484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 33293593 - 33293675
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattattt 410  Q
    ||||||||||||| ||| ||||||||||||||| || ||| ||||| || ||||| |||||||| | |||| |||||| ||||    
T  33293593 cccatacccaaactcgttccgaatgtagaaaatcaatttagtacccattttatatcaatagaaactcaaaccctaaatcattt 33293675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 435
Target Start/End: Complemental strand, 23719616 - 23719512
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    ||||| ||||| ||||||||||||| ||| | || ||| ||||| || |||||||||||||| | ||||| ||||| |||||||| | |||||| |||||    
T  23719616 catactcaaactcgtcccgaatgtacaaa-tcaatttactaccctttttatataaatagaaactcaaactataaatcatttcactaacacagtctgagtc 23719518  T
Q  430 ttagtc 435  Q
    | ||||    
T  23719517 tcagtc 23719512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 29871360 - 29871392
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||||||||||||||||||||||||||||||    
T  29871360 catacccaaacccgtcccgaatgtagaaaatta 29871392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 495
Target Start/End: Complemental strand, 14891053 - 14891002
Alignment:
Q  444 ttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    |||| ||||||||||||| ||| |||||| |||||||| |||||||||||||    
T  14891053 ttataatagttctctcttttctccttccatatctcacaatctcgacctctct 14891002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 495
Target Start/End: Complemental strand, 14903031 - 14902980
Alignment:
Q  444 ttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    |||||||||||||||||| ||| |||||| |||||||| ||||| |||||||    
T  14903031 ttatcatagttctctcttttctccttccatatctcacaatctcggcctctct 14902980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 428
Target Start/End: Original strand, 43513104 - 43513202
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagt 428  Q
    ||||| |||||||||  |||||||| ||||| || |||| || | || |||||||||||||| | |||| |||||| |||||||||  ||| |||||||    
T  43513104 catactcaaacccgtttcgaatgtaaaaaatcaatttataactctttttatataaatagaaactcaaaccctaaataatttcactcgtacaatcagagt 43513202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 49741069 - 49741111
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaa 359  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||    
T  49741069 cccaccccgaacccatacccaaacccgtcccgaatgcagaaaa 49741111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 9982952 - 9982997
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| ||||||||||||||| ||||||||| |||||||||    
T  9982952 cccaccccgaacccatacccaaacccatcccgaatgcagaaaatta 9982997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 29936443 - 29936398
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  29936443 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 29936398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 49250836 - 49250877
Alignment:
Q  318 ccacctcgagcccatacccaaacccgtcccgaatgtagaaaa 359  Q
    ||||||||| |||||||||||||||||||| |||||| ||||    
T  49250836 ccacctcgaacccatacccaaacccgtcccaaatgtaaaaaa 49250877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 51421885 - 51421840
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  51421885 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 51421840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 8e-19; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 328 - 495
Target Start/End: Complemental strand, 9402604 - 9402428
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagag 427  Q
    ||||||| |||||| ||| |||||||||||||| || ||| |||||| | ||||||||||||||   |||| |||||| |||||||||| ||||||||||    
T  9402604 cccatactcaaacctgtctcgaatgtagaaaatcaatttagtaccccatttatataaatagaaacccaaaccctaaatcatttcactcacacagtcagag 9402505  T
Q  428 tcttag---------tcacatgcacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    |||  |         |||||  ||||||||||||||||||||| ||| |||||| |||||||| | ||| |||||||    
T  9402504 tctaggtctttcatatcacactcacttatcatagttctctcttttctccttccatatctcacattttcggcctctct 9402428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 426
Target Start/End: Complemental strand, 13769087 - 13768989
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcaga 426  Q
    |||||| |||||||||||| ||||||||||||| || ||||||| |||| ||||||||| |||| | ||||  |||||||||||| | | |||||||||    
T  13769087 cccatatccaaacccgtcctgaatgtagaaaatcaatttattactccttttatataaattgaaactcaaaccataaattatttcagtaacacagtcaga 13768989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 428
Target Start/End: Original strand, 1947864 - 1947964
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagag 427  Q
    ||||||| ||||| ||| || |||||||||||| || |||||||||||| |||||||||| ||||  |||| |||| | |||  ||||| ||||||||||    
T  1947864 cccatactcaaactcgttccaaatgtagaaaatcaatttattaccccttttatataaataaaaatccaaaccctaagtcattatactcacacagtcagag 1947963  T
Q  428 t 428  Q
    |    
T  1947964 t 1947964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 493
Target Start/End: Original strand, 34346081 - 34346261
Alignment:
Q  331 atacccaaacccgtcccgaatgtagaaaattaaattattaccccttatata---------taaatagaaattgaaactctaaattatttcactcaaacag 421  Q
    ||||||||| |||| |||||||||||||||||| ||||||| |||| ||||         ||||||||||   |||| |||||| |||||||||| ||||    
T  34346081 atacccaaatccgttccgaatgtagaaaattaatttattactccttttatataaattatataaatagaaacccaaaccctaaatcatttcactcacacag 34346180  T
Q  422 tcagagtcttagtc----acatg-----cacttatcatagttctctcttatctacttccacatctcacactctcgacctct 493  Q
    ||||||||| ||||    | |||     |||||||||||||||| |||| ||| |||||| |||||||| ||||| |||||    
T  34346181 tcagagtctcagtcttttagatgagagtcacttatcatagttctatcttttcttcttccatatctcacattctcggcctct 34346261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 10925506 - 10925623
Alignment:
Q  318 ccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaa 417  Q
    ||||| ||| |||||||| |||| | | ||||||||| |||| ||| ||||||  |||| |||||||||||||  |||||| |||||| |||||||| |     
T  10925506 ccaccccgaacccatacctaaactcattccgaatgtaaaaaaataatttattattccttttatataaatagaatctgaaaccctaaatcatttcactaac 10925605  T
Q  418 acagtcagagtcttagtc 435  Q
    ||| ||| ||| ||||||    
T  10925606 acaatcaaagttttagtc 10925623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 430
Target Start/End: Original strand, 256565 - 256668
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatat-aaatagaaattgaaactctaaattatttcactcaaacagtcaga 426  Q
    ||||||||||||||| |||  |||||||||||| || ||| |||||||| ||| | |||||||||   ||||||||||||| |||  ||| | |||||||    
T  256565 cccatacccaaacccctcctaaatgtagaaaatcaatttactaccccttttatttaaaatagaaacacaaactctaaattaattctttcacatagtcaga 256664  T
Q  427 gtct 430  Q
    ||||    
T  256665 gtct 256668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 495
Target Start/End: Original strand, 2126819 - 2126870
Alignment:
Q  444 ttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    |||||||||||||||||| ||| |||||| |||||||||||| | |||||||    
T  2126819 ttatcatagttctctcttttctccttccatatctcacactcttggcctctct 2126870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 1947986 - 1948040
Alignment:
Q  441 cacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    ||||||||||||||| ||||| ||||||| || |||||||| ||| |||||||||    
T  1947986 cacttatcatagttccctcttttctactttcatatctcacaatcttgacctctct 1948040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 5863445 - 5863487
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaa 359  Q
    |||||||||| |||||||||||||||||||| |||||| ||||    
T  5863445 cccacctcgaacccatacccaaacccgtcccaaatgtaaaaaa 5863487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 430
Target Start/End: Original strand, 8320868 - 8320970
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagag 427  Q
    |||||||||| |||||| | ||||| | ||||| || ||||||| || | ||  |||||||||| | |||| |||||| |||||||| | ||||||||||    
T  8320868 cccatacccagacccgttctgaatgcaaaaaatcaacttattactccatttacgtaaatagaaacttaaaccctaaatcatttcacttacacagtcagag 8320967  T
Q  428 tct 430  Q
    |||    
T  8320968 tct 8320970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 416
Target Start/End: Complemental strand, 14321876 - 14321794
Alignment:
Q  334 cccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||||| |||  |||||||||||||||| ||||||||  || |||||||||||||| | |||   ||||| ||||||||||    
T  14321876 cccaaacctgtcatgaatgtagaaaattaatttattacctattttatataaatagaaactcaaatcttaaatcatttcactca 14321794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 360
Target Start/End: Complemental strand, 29341269 - 29341239
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaat 360  Q
    |||||||||||||||||||||||||||||||    
T  29341269 catacccaaacccgtcccgaatgtagaaaat 29341239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 12141411 - 12141366
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  12141411 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 12141366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 483
Target Start/End: Complemental strand, 20348957 - 20348916
Alignment:
Q  442 acttatcatagttctctcttatctacttccacatctcacact 483  Q
    |||||||||||||||||||| ||| |||||| ||||||||||    
T  20348957 acttatcatagttctctcttttctccttccatatctcacact 20348916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 24602918 - 24602963
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| ||||||||||||||| || ||||||||||||||||    
T  24602918 cccaccccgaacccatacccaaacccatcacgaatgtagaaaatta 24602963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 27738798 - 27738753
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  27738798 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 27738753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 32853870 - 32853825
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  32853870 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 32853825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 37032179 - 37032273
Alignment:
Q  336 caaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtct 430  Q
    ||||||| ||| |||||||||||||||| ||||||||| || |||||||||| ||| | |||| |||||| |||||||||| ||| |||||||||    
T  37032179 caaacccatcctgaatgtagaaaattaatttattacccattttatataaataaaaactcaaaccctaaatcatttcactcatacaatcagagtct 37032273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 317 - 428
Target Start/End: Original strand, 30904877 - 30904988
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||| ||| |||||||||||| ||||| ||||||||| |||| || ||| |||||||| ||||||||||||||   |||| || ||| ||||||||||    
T  30904877 cccaccccgaacccatacccaaatccgtctcgaatgtaggaaatcaatttactaccccttttatataaatagaaacccaaacccttaatcatttcactca 30904976  T
Q  417 aacagtcagagt 428  Q
     | |||||||||    
T  30904977 tatagtcagagt 30904988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 430
Target Start/End: Original strand, 3414607 - 3414708
Alignment:
Q  329 ccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagt 428  Q
    |||||| ||||||||| || |||||||||||| |  ||| |||||||| | |||||||| |||| ||||| |||||| |||||||||| | ||||| |||    
T  3414607 ccatactcaaacccgtacctaatgtagaaaatcattttaataccccttttctataaataaaaatcgaaaccctaaatcatttcactcacatagtcaaagt 3414706  T
Q  429 ct 430  Q
    ||    
T  3414707 ct 3414708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 495
Target Start/End: Complemental strand, 40890254 - 40890203
Alignment:
Q  444 ttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    |||||||||||||||||| ||| ||||||  |||||||||| ||||||||||    
T  40890254 ttatcatagttctctcttttctccttccatctctcacactcccgacctctct 40890203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 495
Target Start/End: Complemental strand, 27252460 - 27252407
Alignment:
Q  441 cacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    |||||||| |||||||||||| ||| |||||| |||||||||||||| |||||||    
T  27252460 cacttatcttagttctctctt-tctccttccatatctcacactctcggcctctct 27252407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 495
Target Start/End: Complemental strand, 34593049 - 34592995
Alignment:
Q  441 cacttatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    |||||||||||||||| |  | ||| |||||| ||||||||||||||||||||||    
T  34593049 cacttatcatagttctattgtttctccttccatatctcacactctcgacctctct 34592995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 42243400 - 42243346
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataa 384  Q
    ||||||||||||| |||  |||||||||||| || |||||||||||| |||||||    
T  42243400 catacccaaacccatcctaaatgtagaaaatcaatttattaccccttttatataa 42243346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 38347570 - 38347525
Alignment:
Q  385 atagaaattgaaactctaaattatttcactcaaacagtcagagtct 430  Q
    ||||||| | ||||||||||| |||||||||| |||||||||||||    
T  38347570 atagaaactcaaactctaaatcatttcactcatacagtcagagtct 38347525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 39728697 - 39728652
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  39728697 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 39728652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 44172652 - 44172607
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  44172652 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 44172607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 44179352 - 44179307
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  44179352 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 44179307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 49580090 - 49580045
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||||||| ||||||| |||||||||||| |||||| |||||||    
T  49580090 cccacctcgaacccatactcaaacccgtcccaaatgtaaaaaatta 49580045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 27937734 - 27937666
Alignment:
Q  348 gaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    |||||||| ||||||| |||||||  ||| ||||||||||||||   |||| |||||| ||||||||||    
T  27937734 gaatgtaggaaattaatttattacagcttttatataaatagaaacctaaaccctaaatcatttcactca 27937666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 30682846 - 30682802
Alignment:
Q  318 ccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    ||||||||| || |||| ||||||||||| |||||||||||||||    
T  30682846 ccacctcgaacctatactcaaacccgtcctgaatgtagaaaatta 30682802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 430
Target Start/End: Original strand, 19440072 - 19440186
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgt-agaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactc 415  Q
    ||||| |||| |||||||||||||||||||||||||| | ||||| || |||  |||||||   ||||||||||||   ||||||||||| |||||||||    
T  19440072 cccacttcgaacccatacccaaacccgtcccgaatgtaaaaaaatcaatttaccacccctttggtataaatagaaacccaaactctaaatcatttcactc 19440171  T
Q  416 aaacagtcagagtct 430  Q
    | | |||||||||||    
T  19440172 acatagtcagagtct 19440186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 29292722 - 29292636
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcact 414  Q
    |||||||| |||| |||| |||||||||||||| || ||| |||||||| |||||||| ||||||  |||| |||||||||||||||    
T  29292722 cccatacctaaactcgtctcgaatgtagaaaatcaatttactaccccttttatataaagagaaatccaaaccctaaattatttcact 29292636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 429
Target Start/End: Original strand, 23475325 - 23475438
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgt-agaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactc 415  Q
    ||||| |||| |||||||||||||||||||||||||| | ||||| || ||| ||||| || | |||||||| |||   ||||||||||| |||||||||    
T  23475325 cccacttcgaacccatacccaaacccgtcccgaatgtaaaaaaatcaatttactacccgttttgtataaataaaaacccaaactctaaatcatttcactc 23475424  T
Q  416 aaacagtcagagtc 429  Q
    | | ||||||||||    
T  23475425 acatagtcagagtc 23475438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 435
Target Start/End: Original strand, 36251009 - 36251110
Alignment:
Q  334 cccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtcttag 433  Q
    ||||||||||||||||||||||||||| || |||||||   || |||||||||| ||| | ||||||||||  |||||||| | ||||||||| ||| ||    
T  36251009 cccaaacccgtcccgaatgtagaaaatcaatttattacatattttatataaataaaaactaaaactctaaaccatttcacttatacagtcagactctcag 36251108  T
Q  434 tc 435  Q
    ||    
T  36251109 tc 36251110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 483
Target Start/End: Original strand, 11472788 - 11472949
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    |||||||||| ||||||| |||| ||||||| || ||||||  |||| ||||||||||||||   |||| |||||| ||||||||||   ||| ||||||    
T  11472788 catacccaaatccgtcccaaatg-agaaaatcaatttattataccttttatataaatagaaaccaaaaccctaaatcatttcactcacgtagttagagtc 11472886  T
Q  430 ttagtc---------acatgcacttatcatagttctctcttatctacttccacatctcacact 483  Q
    | ||||         |||  ||||||||||||||||||||||||| |||||| ||||||||||    
T  11472887 tcagtcttttagatgacactcacttatcatagttctctcttatctccttccatatctcacact 11472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 435
Target Start/End: Original strand, 43550491 - 43550595
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtc 429  Q
    ||||| ||||||||||| |||||| |||| |  | |||||||||||| ||||||||||||||   |||| |||||| ||||||||||||  |||||||||    
T  43550491 catacacaaacccgtcctgaatgtggaaagtctatttattaccccttctatataaatagaaacccaaaccctaaatcatttcactcaaa-tgtcagagtc 43550589  T
Q  430 ttagtc 435  Q
    | ||||    
T  43550590 tcagtc 43550595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 428
Target Start/End: Complemental strand, 3774089 - 3773989
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagag 427  Q
    ||||||| |||| ||||||||||| |||||||| || |||||||||||| ||||||| ||| ||   |||| | |||| |||| ||||| ||||||||||    
T  3774089 cccatactcaaatccgtcccgaatttagaaaatcaatttattaccccttttatataattaggaacccaaacgcaaaatcattttactcacacagtcagag 3773990  T
Q  428 t 428  Q
    |    
T  3773989 t 3773989  T

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Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 430
Target Start/End: Original strand, 23533665 - 23533780
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaattaaatt--attaccccttatatataaatagaaattgaaactctaaattatttcact 414  Q
    ||||| |||| ||||||||||||| ||||||||||||| |||| | ||||   | ||||||| | ||||| ||||||   ||||||||||| ||||||||    
T  23533665 cccacttcgaacccatacccaaactcgtcccgaatgtaaaaaaatcaatttactaaccccttttgtataattagaaacccaaactctaaatcatttcact 23533764  T
Q  415 caaacagtcagagtct 430  Q
    || | |||||||||||    
T  23533765 cacatagtcagagtct 23533780  T

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Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 362
Target Start/End: Original strand, 27850399 - 27850433
Alignment:
Q  328 cccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||||||||||||||||||||||||||||||||    
T  27850399 cccatacccaaacccgtcccgaatgtagaaaatta 27850433  T

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Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 495
Target Start/End: Complemental strand, 37217898 - 37217848
Alignment:
Q  445 tatcatagttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| |||||||    
T  37217898 tatcatagttctctcttctctccttccatatctcacactctcggcctctct 37217848  T

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Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 31345531 - 31345438
Alignment:
Q  343 gtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactcaaacagtcagagtcttagtca 436  Q
    |||||||||||| ||||| || ||| ||||  || |||||||||||||| | |||||||| || |||||||||| ||| ||| ||||| |||||    
T  31345531 gtcccgaatgtaaaaaatcaatttactaccatttttatataaatagaaactcaaactctatatcatttcactcacacaatcaaagtctcagtca 31345438  T

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Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 3157100 - 3157040
Alignment:
Q  331 atacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaa 391  Q
    ||||||||||||||||| ||  |||||||| || |||||||||||  ||||||||||||||    
T  3157100 atacccaaacccgtcccaaacatagaaaatcaatttattacccctactatataaatagaaa 3157040  T

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Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 495
Target Start/End: Complemental strand, 8265714 - 8265672
Alignment:
Q  453 ttctctcttatctacttccacatctcacactctcgacctctct 495  Q
    ||||||||||||| |||||| || |||||||||||||||||||    
T  8265714 ttctctcttatctccttccatatgtcacactctcgacctctct 8265672  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 3920569 - 3920524
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||| | ||||||||||||||||||||    
T  3920569 cccaccccgaacccatacccaaaactgtcccgaatgtagaaaatta 3920524  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 16866200 - 16866155
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||    
T  16866200 cccaccccgaacccatacccaaacccgtcccaaatgtaaaaaatta 16866155  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 23328641 - 23328596
Alignment:
Q  317 cccacctcgagcccatacccaaacccgtcccgaatgtagaaaatta 362  Q
    |||||| ||| || |||||||||||||||||||||| |||||||||    
T  23328641 cccaccccgatcctatacccaaacccgtcccgaatggagaaaatta 23328596  T

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Target: scaffold1322 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 416
Target Start/End: Complemental strand, 1120 - 1038
Alignment:
Q  334 cccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttcactca 416  Q
    ||||||||||||  |||||||||||||||| ||||||||| || |||||||||||||| | |||   ||||| ||||||||||    
T  1120 cccaaacccgtcatgaatgtagaaaattaatttattacccattttatataaatagaaactcaaatcttaaatcatttcactca 1038  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 14871 - 14789
Alignment:
Q  330 catacccaaacccgtcccgaatgtagaaaattaaattattaccccttatatataaatagaaattgaaactctaaattatttca 412  Q
    ||||||||||||||||| ||| ||| || || || ||||| |||||| |||||||||||||| | ||||  ||||| ||||||    
T  14871 catacccaaacccgtcctgaaggtaaaacatcaatttatttccccttttatataaatagaaacttaaacattaaatcatttca 14789  T

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