View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8349_low_36 (Length: 332)

Name: NF8349_low_36
Description: NF8349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8349_low_36
NF8349_low_36
[»] chr3 (82 HSPs)
chr3 (115-238)||(44592759-44592882)
chr3 (1-116)||(44592918-44593033)
chr3 (228-305)||(52168269-52168346)
chr3 (242-315)||(29720143-29720216)
chr3 (242-304)||(38455243-38455305)
chr3 (242-315)||(29512198-29512271)
chr3 (242-315)||(36362604-36362677)
chr3 (242-315)||(50260933-50261006)
chr3 (242-315)||(51239243-51239316)
chr3 (243-315)||(52931642-52931714)
chr3 (242-304)||(29565109-29565171)
chr3 (242-304)||(51239321-51239383)
chr3 (242-315)||(29565176-29565249)
chr3 (242-315)||(38455165-38455238)
chr3 (242-315)||(51617398-51617471)
chr3 (247-315)||(42449110-42449178)
chr3 (242-315)||(21403963-21404034)
chr3 (242-304)||(33412543-33412605)
chr3 (242-304)||(41349660-41349722)
chr3 (242-315)||(41349727-41349801)
chr3 (242-304)||(51617331-51617393)
chr3 (242-304)||(52931751-52931813)
chr3 (242-315)||(10872739-10872812)
chr3 (242-315)||(12744901-12744974)
chr3 (242-315)||(32758966-32759039)
chr3 (242-315)||(52168350-52168423)
chr3 (243-307)||(18940044-18940108)
chr3 (248-304)||(36362682-36362738)
chr3 (252-315)||(52315400-52315463)
chr3 (242-304)||(17552477-17552539)
chr3 (243-304)||(52315468-52315529)
chr3 (242-298)||(12568458-12568514)
chr3 (242-298)||(13544922-13544978)
chr3 (244-304)||(22099781-22099841)
chr3 (244-304)||(22173797-22173857)
chr3 (249-297)||(32759051-32759099)
chr3 (253-317)||(34205628-34205691)
chr3 (244-304)||(42449183-42449243)
chr3 (264-315)||(18480898-18480949)
chr3 (249-304)||(18939970-18940025)
chr3 (235-298)||(26104767-26104830)
chr3 (242-304)||(21403897-21403958)
chr3 (242-304)||(33412466-33412527)
chr3 (242-307)||(8439258-8439323)
chr3 (246-307)||(12744976-12745037)
chr3 (253-294)||(22153147-22153188)
chr3 (242-307)||(25881211-25881276)
chr3 (242-315)||(38677565-38677638)
chr3 (246-315)||(40470422-40470491)
chr3 (254-315)||(42595804-42595864)
chr3 (242-315)||(52215880-52215953)
chr3 (252-312)||(29720219-29720279)
chr3 (256-315)||(9492690-9492749)
chr3 (242-297)||(22153059-22153114)
chr3 (242-297)||(29720076-29720131)
chr3 (242-304)||(50261011-50261074)
chr3 (254-317)||(53717962-53718024)
chr3 (244-294)||(22497039-22497089)
chr3 (254-308)||(29076599-29076652)
chr3 (1-53)||(31300815-31300869)
chr3 (244-298)||(36566719-36566773)
chr3 (246-315)||(334732-334801)
chr3 (242-307)||(2128436-2128501)
chr3 (254-315)||(8126143-8126203)
chr3 (242-315)||(8504850-8504923)
chr3 (233-286)||(22456276-22456329)
chr3 (242-315)||(25881136-25881209)
chr3 (268-317)||(35760804-35760853)
chr3 (242-307)||(40639784-40639849)
chr3 (244-304)||(105374-105434)
chr3 (242-286)||(331894-331938)
chr3 (242-286)||(7882281-7882325)
chr3 (242-298)||(8439342-8439398)
chr3 (242-286)||(9170112-9170156)
chr3 (242-286)||(21217166-21217210)
chr3 (265-317)||(32589380-32589432)
chr3 (269-317)||(32833745-32833793)
chr3 (247-291)||(34903675-34903719)
chr3 (242-298)||(37492381-37492437)
chr3 (242-286)||(40470514-40470558)
chr3 (254-306)||(47342658-47342709)
chr3 (242-306)||(48191715-48191779)
[»] chr8 (59 HSPs)
chr8 (242-315)||(9056088-9056161)
chr8 (242-303)||(1739644-1739705)
chr8 (242-315)||(14381238-14381311)
chr8 (242-315)||(40098827-40098900)
chr8 (247-315)||(26014574-26014642)
chr8 (242-297)||(40098760-40098815)
chr8 (242-304)||(9056021-9056083)
chr8 (242-315)||(13211239-13211312)
chr8 (244-315)||(7377556-7377627)
chr8 (248-315)||(9808439-9808506)
chr8 (242-304)||(14381316-14381378)
chr8 (236-315)||(5888403-5888482)
chr8 (242-305)||(33574864-33574927)
chr8 (244-298)||(10117054-10117108)
chr8 (242-304)||(13211317-13211379)
chr8 (242-304)||(15285653-15285715)
chr8 (242-304)||(15466022-15466084)
chr8 (242-315)||(7258652-7258725)
chr8 (242-315)||(11692048-11692120)
chr8 (244-304)||(9808376-9808436)
chr8 (229-313)||(10934590-10934674)
chr8 (271-315)||(13228937-13228981)
chr8 (244-304)||(37716152-37716212)
chr8 (244-315)||(11295666-11295737)
chr8 (241-304)||(24820375-24820438)
chr8 (254-317)||(34194573-34194635)
chr8 (243-297)||(2810108-2810162)
chr8 (244-286)||(6197922-6197964)
chr8 (242-315)||(13496502-13496575)
chr8 (242-307)||(24053597-24053662)
chr8 (264-317)||(26492374-26492427)
chr8 (242-307)||(31505113-31505178)
chr8 (242-307)||(31810409-31810474)
chr8 (249-304)||(7377632-7377688)
chr8 (246-298)||(13841852-13841904)
chr8 (242-306)||(28882664-28882728)
chr8 (244-315)||(37716076-37716147)
chr8 (253-315)||(15285720-15285782)
chr8 (253-315)||(15466089-15466151)
chr8 (242-307)||(1744232-1744297)
chr8 (268-317)||(7256913-7256962)
chr8 (242-307)||(10934678-10934743)
chr8 (242-303)||(13029393-13029454)
chr8 (248-285)||(26014665-26014702)
chr8 (242-303)||(29424062-29424123)
chr8 (242-315)||(33070232-33070305)
chr8 (254-315)||(35063527-35063587)
chr8 (254-315)||(40716759-40716819)
chr8 (242-303)||(42749055-42749116)
chr8 (242-294)||(13290035-13290087)
chr8 (242-286)||(17087355-17087399)
chr8 (242-286)||(17087443-17087487)
chr8 (242-290)||(24471269-24471317)
chr8 (242-298)||(27518399-27518455)
chr8 (247-291)||(28939422-28939466)
chr8 (273-317)||(29730718-29730762)
chr8 (242-298)||(31505038-31505094)
chr8 (254-314)||(32484954-32485013)
chr8 (254-306)||(42631792-42631843)
[»] chr5 (94 HSPs)
chr5 (242-315)||(26300111-26300184)
chr5 (242-315)||(42013822-42013895)
chr5 (242-304)||(43446859-43446921)
chr5 (246-315)||(11262332-11262401)
chr5 (242-315)||(19531368-19531441)
chr5 (242-315)||(23914841-23914914)
chr5 (242-315)||(37944602-37944675)
chr5 (242-304)||(3851441-3851503)
chr5 (242-315)||(3851363-3851436)
chr5 (242-304)||(19531301-19531363)
chr5 (246-304)||(37944680-37944738)
chr5 (242-304)||(42013900-42013962)
chr5 (242-315)||(8961219-8961292)
chr5 (242-315)||(13311175-13311247)
chr5 (242-298)||(26300195-26300251)
chr5 (249-304)||(38835532-38835587)
chr5 (242-315)||(11795736-11795809)
chr5 (242-315)||(13157333-13157406)
chr5 (242-315)||(15712188-15712261)
chr5 (244-304)||(11262406-11262466)
chr5 (242-298)||(12646588-12646644)
chr5 (242-305)||(35969128-35969192)
chr5 (244-304)||(37870095-37870155)
chr5 (242-286)||(43447464-43447508)
chr5 (242-293)||(11172002-11172052)
chr5 (244-315)||(35969196-35969267)
chr5 (242-304)||(23914919-23914981)
chr5 (243-304)||(15712122-15712183)
chr5 (242-307)||(25792921-25792986)
chr5 (254-317)||(23042027-23042089)
chr5 (237-303)||(1098706-1098772)
chr5 (1-52)||(5386084-5386137)
chr5 (242-315)||(38835592-38835666)
chr5 (237-307)||(40100082-40100152)
chr5 (242-315)||(71259-71332)
chr5 (247-304)||(13157411-13157467)
chr5 (246-303)||(13311253-13311310)
chr5 (244-313)||(25408612-25408681)
chr5 (242-315)||(26141755-26141828)
chr5 (242-286)||(1996847-1996891)
chr5 (242-286)||(1996944-1996988)
chr5 (242-298)||(5259469-5259525)
chr5 (242-298)||(6763781-6763837)
chr5 (242-298)||(12750118-12750174)
chr5 (244-304)||(25358060-25358120)
chr5 (242-286)||(25772154-25772198)
chr5 (242-286)||(27314475-27314519)
chr5 (242-298)||(41180297-41180353)
chr5 (254-317)||(5226032-5226094)
chr5 (244-315)||(5984050-5984121)
chr5 (254-317)||(14571021-14571083)
chr5 (254-317)||(21369338-21369400)
chr5 (244-315)||(21945447-21945518)
chr5 (254-317)||(24433548-24433610)
chr5 (268-307)||(35969067-35969106)
chr5 (237-288)||(40515275-40515326)
chr5 (264-315)||(43340437-43340488)
chr5 (237-307)||(7313905-7313975)
chr5 (256-306)||(12165298-12165348)
chr5 (242-308)||(13654509-13654575)
chr5 (254-304)||(14064888-14064937)
chr5 (242-296)||(26045265-26045319)
chr5 (253-307)||(29807090-29807143)
chr5 (237-315)||(42364215-42364293)
chr5 (244-286)||(42364316-42364358)
chr5 (244-313)||(1180743-1180812)
chr5 (237-286)||(5240221-5240270)
chr5 (242-307)||(5259385-5259450)
chr5 (247-304)||(8961297-8961354)
chr5 (242-279)||(13356106-13356143)
chr5 (245-298)||(13654592-13654645)
chr5 (268-317)||(14064836-14064885)
chr5 (254-315)||(14416419-14416479)
chr5 (242-315)||(18033422-18033495)
chr5 (246-307)||(21126632-21126693)
chr5 (242-303)||(25408543-25408604)
chr5 (242-307)||(25776979-25777044)
chr5 (242-307)||(26141830-26141895)
chr5 (254-315)||(26168201-26168261)
chr5 (254-315)||(32146840-32146900)
chr5 (264-317)||(37039714-37039767)
chr5 (239-296)||(40515224-40515281)
chr5 (242-307)||(41180213-41180278)
chr5 (242-306)||(13356213-13356277)
chr5 (247-315)||(14153374-14153442)
chr5 (242-286)||(20019844-20019888)
chr5 (268-308)||(20367334-20367374)
chr5 (242-286)||(25772251-25772295)
chr5 (242-286)||(26221024-26221068)
chr5 (242-294)||(33075065-33075117)
chr5 (247-291)||(33684134-33684178)
chr5 (251-307)||(37067840-37067896)
chr5 (254-306)||(39126090-39126141)
chr5 (254-306)||(43585571-43585622)
[»] chr1 (106 HSPs)
chr1 (242-315)||(31008259-31008332)
chr1 (242-315)||(8258010-8258083)
chr1 (242-315)||(639799-639872)
chr1 (242-315)||(6065528-6065601)
chr1 (242-315)||(33604058-33604131)
chr1 (242-315)||(48022595-48022668)
chr1 (244-315)||(2352962-2353033)
chr1 (242-313)||(17490488-17490559)
chr1 (242-315)||(37734840-37734913)
chr1 (242-298)||(4060255-4060311)
chr1 (242-306)||(23944037-23944101)
chr1 (244-304)||(34658388-34658448)
chr1 (242-304)||(3384223-3384285)
chr1 (242-304)||(6065461-6065523)
chr1 (242-304)||(37734773-37734835)
chr1 (243-307)||(5431415-5431479)
chr1 (241-315)||(4602711-4602785)
chr1 (242-304)||(8257943-8258005)
chr1 (242-304)||(14418135-14418197)
chr1 (242-315)||(40262535-40262606)
chr1 (242-315)||(3384290-3384363)
chr1 (242-315)||(27206759-27206832)
chr1 (242-303)||(31008338-31008399)
chr1 (242-298)||(27206843-27206899)
chr1 (242-297)||(1035972-1036027)
chr1 (244-315)||(5856424-5856495)
chr1 (240-315)||(21321385-21321460)
chr1 (242-304)||(639877-639939)
chr1 (253-315)||(15439929-15439991)
chr1 (242-304)||(35367556-35367618)
chr1 (242-304)||(48022673-48022735)
chr1 (242-315)||(34953963-34954036)
chr1 (237-298)||(38834606-38834667)
chr1 (247-315)||(4060176-4060244)
chr1 (242-306)||(19175664-19175728)
chr1 (241-315)||(2349823-2349898)
chr1 (242-304)||(14214607-14214669)
chr1 (243-297)||(15439863-15439917)
chr1 (242-304)||(33603991-33604053)
chr1 (253-315)||(37255138-37255199)
chr1 (237-287)||(39515060-39515110)
chr1 (242-308)||(52923323-52923389)
chr1 (264-317)||(1358194-1358247)
chr1 (242-307)||(1409124-1409189)
chr1 (247-304)||(2349761-2349818)
chr1 (243-296)||(5431342-5431395)
chr1 (242-307)||(6508472-6508537)
chr1 (242-295)||(14214550-14214603)
chr1 (242-315)||(33939364-33939437)
chr1 (242-307)||(36040146-36040211)
chr1 (243-304)||(40262469-40262530)
chr1 (242-315)||(45115237-45115310)
chr1 (242-298)||(8338675-8338731)
chr1 (243-307)||(10256782-10256846)
chr1 (242-298)||(28725550-28725606)
chr1 (242-286)||(29302064-29302108)
chr1 (242-286)||(29302161-29302205)
chr1 (244-307)||(6283610-6283673)
chr1 (244-315)||(11989376-11989447)
chr1 (242-313)||(15351784-15351855)
chr1 (254-317)||(15998224-15998286)
chr1 (244-303)||(38468765-38468824)
chr1 (244-315)||(42761455-42761526)
chr1 (243-297)||(4602645-4602699)
chr1 (2-54)||(12972709-12972763)
chr1 (249-307)||(34597527-34597585)
chr1 (242-307)||(52183576-52183642)
chr1 (242-304)||(52923401-52923463)
chr1 (242-315)||(47753-47826)
chr1 (254-315)||(5852755-5852815)
chr1 (242-315)||(6283535-6283608)
chr1 (242-315)||(6758546-6758619)
chr1 (237-290)||(9675961-9676014)
chr1 (237-278)||(13319923-13319964)
chr1 (242-307)||(15057657-15057722)
chr1 (242-303)||(15351715-15351776)
chr1 (254-315)||(16426975-16427035)
chr1 (242-315)||(23575385-23575458)
chr1 (246-315)||(34658453-34658522)
chr1 (242-303)||(39216103-39216164)
chr1 (242-303)||(39940565-39940626)
chr1 (242-307)||(41161540-41161605)
chr1 (242-307)||(46412763-46412828)
chr1 (254-315)||(46517958-46518018)
chr1 (254-315)||(47912639-47912699)
chr1 (242-307)||(52112876-52112941)
chr1 (247-315)||(3013615-3013683)
chr1 (3-53)||(3904198-3904250)
chr1 (243-315)||(11324500-11324572)
chr1 (243-315)||(11482521-11482593)
chr1 (265-317)||(12062259-12062311)
chr1 (243-315)||(14891805-14891877)
chr1 (242-298)||(17342347-17342403)
chr1 (247-291)||(18789842-18789886)
chr1 (243-307)||(19175589-19175653)
chr1 (242-298)||(21305040-21305096)
chr1 (247-303)||(24981846-24981902)
chr1 (242-290)||(32796838-32796886)
chr1 (242-286)||(35156265-35156309)
chr1 (242-298)||(36040230-36040286)
chr1 (242-298)||(36486539-36486595)
chr1 (254-306)||(39181062-39181113)
chr1 (264-316)||(39422085-39422137)
chr1 (254-306)||(42914612-42914663)
chr1 (242-294)||(48083592-48083644)
chr1 (242-298)||(49586089-49586145)
[»] chr7 (88 HSPs)
chr7 (242-315)||(25079207-25079280)
chr7 (242-315)||(38238783-38238857)
chr7 (242-315)||(34703510-34703583)
chr7 (243-315)||(40416973-40417045)
chr7 (242-304)||(38238862-38238924)
chr7 (242-304)||(1706833-1706895)
chr7 (242-304)||(25079285-25079347)
chr7 (243-304)||(18234423-18234484)
chr7 (246-315)||(45000668-45000737)
chr7 (247-315)||(4406422-4406490)
chr7 (247-315)||(22106672-22106740)
chr7 (247-315)||(40529611-40529679)
chr7 (251-313)||(716303-716365)
chr7 (253-303)||(22281522-22281572)
chr7 (242-304)||(27554575-27554637)
chr7 (242-304)||(46943944-46944006)
chr7 (242-315)||(24936600-24936673)
chr7 (248-315)||(1706900-1706967)
chr7 (248-315)||(27554503-27554570)
chr7 (244-307)||(41872126-41872189)
chr7 (244-303)||(46944016-46944075)
chr7 (242-304)||(34703443-34703505)
chr7 (242-304)||(40416906-40416968)
chr7 (242-303)||(16777892-16777953)
chr7 (258-315)||(26385692-26385749)
chr7 (242-315)||(29498783-29498856)
chr7 (243-304)||(29498861-29498922)
chr7 (237-305)||(2456331-2456399)
chr7 (242-286)||(10422808-10422852)
chr7 (242-286)||(10422904-10422948)
chr7 (242-298)||(15051083-15051139)
chr7 (244-307)||(31813413-31813476)
chr7 (228-315)||(46648331-46648418)
chr7 (256-306)||(21387652-21387702)
chr7 (236-286)||(21857063-21857113)
chr7 (237-307)||(38940215-38940285)
chr7 (242-296)||(43813125-43813179)
chr7 (242-315)||(6455549-6455622)
chr7 (242-307)||(6455624-6455689)
chr7 (242-307)||(10095719-10095784)
chr7 (242-315)||(21387576-21387649)
chr7 (242-315)||(23797415-23797488)
chr7 (246-307)||(26904856-26904917)
chr7 (242-307)||(34275191-34275256)
chr7 (244-317)||(34478300-34478373)
chr7 (242-286)||(2297331-2297375)
chr7 (242-286)||(2360449-2360493)
chr7 (242-286)||(4407715-4407759)
chr7 (242-298)||(21886467-21886523)
chr7 (242-298)||(22281443-22281499)
chr7 (242-286)||(26824906-26824950)
chr7 (247-303)||(37491278-37491334)
chr7 (243-307)||(37491348-37491412)
chr7 (244-303)||(12171321-12171380)
chr7 (249-304)||(22106745-22106800)
chr7 (242-297)||(24935892-24935947)
chr7 (242-313)||(29779783-29779854)
chr7 (249-304)||(40529551-40529606)
chr7 (247-286)||(43250374-43250413)
chr7 (243-298)||(45000602-45000657)
chr7 (254-317)||(46658797-46658859)
chr7 (242-288)||(2360543-2360589)
chr7 (254-316)||(25486782-25486843)
chr7 (237-303)||(34840609-34840675)
chr7 (248-286)||(43250435-43250473)
chr7 (242-288)||(46648721-46648767)
chr7 (250-298)||(716241-716290)
chr7 (242-307)||(4406079-4406144)
chr7 (254-315)||(7344965-7345025)
chr7 (234-303)||(8169175-8169244)
chr7 (242-303)||(8571461-8571522)
chr7 (242-303)||(8595147-8595208)
chr7 (242-315)||(10414939-10415012)
chr7 (242-307)||(12274884-12274949)
chr7 (254-315)||(19531966-19532026)
chr7 (242-307)||(25245218-25245283)
chr7 (237-286)||(26982759-26982808)
chr7 (242-307)||(28949350-28949415)
chr7 (254-315)||(46221145-46221205)
chr7 (254-306)||(3498307-3498358)
chr7 (245-305)||(3967782-3967842)
chr7 (242-286)||(8571382-8571426)
chr7 (242-270)||(8595259-8595287)
chr7 (242-286)||(12171242-12171286)
chr7 (242-306)||(28228988-28229052)
chr7 (244-304)||(31417595-31417655)
chr7 (254-306)||(43067037-43067088)
chr7 (242-298)||(43103072-43103128)
[»] chr4 (77 HSPs)
chr4 (242-315)||(5418582-5418655)
chr4 (247-315)||(24941116-24941184)
chr4 (242-315)||(5281202-5281275)
chr4 (242-315)||(52817634-52817707)
chr4 (242-315)||(55087778-55087851)
chr4 (244-304)||(13689538-13689598)
chr4 (243-315)||(13689603-13689675)
chr4 (242-298)||(44156084-44156140)
chr4 (242-307)||(16468204-16468269)
chr4 (242-308)||(54164887-54164953)
chr4 (254-315)||(13743871-13743931)
chr4 (242-298)||(24941195-24941251)
chr4 (242-306)||(38381976-38382040)
chr4 (242-298)||(54713098-54713154)
chr4 (244-315)||(3511711-3511782)
chr4 (251-298)||(10031506-10031552)
chr4 (254-317)||(26206659-26206721)
chr4 (254-317)||(34709588-34709650)
chr4 (246-304)||(5418519-5418577)
chr4 (242-308)||(19934712-19934778)
chr4 (242-304)||(52817567-52817629)
chr4 (242-303)||(3740387-3740448)
chr4 (244-305)||(12596678-12596739)
chr4 (242-307)||(19934638-19934703)
chr4 (242-307)||(20215567-20215632)
chr4 (242-307)||(20294506-20294571)
chr4 (242-315)||(28702061-28702134)
chr4 (237-298)||(31933642-31933703)
chr4 (242-315)||(36072570-36072643)
chr4 (242-315)||(49481880-49481953)
chr4 (242-307)||(49481955-49482020)
chr4 (242-307)||(54164813-54164878)
chr4 (242-315)||(56328517-56328590)
chr4 (242-286)||(19878147-19878191)
chr4 (244-304)||(29006837-29006897)
chr4 (1-54)||(32294764-32294819)
chr4 (245-313)||(54106544-54106612)
chr4 (244-307)||(2440912-2440975)
chr4 (256-315)||(4406308-4406367)
chr4 (251-298)||(6243709-6243756)
chr4 (256-315)||(21142157-21142216)
chr4 (244-315)||(21859484-21859555)
chr4 (244-315)||(21915347-21915418)
chr4 (254-317)||(36235743-36235805)
chr4 (254-317)||(43635849-43635911)
chr4 (241-307)||(4044373-4044439)
chr4 (237-307)||(4386318-4386388)
chr4 (260-294)||(6243643-6243677)
chr4 (242-304)||(10031599-10031661)
chr4 (244-298)||(20598259-20598313)
chr4 (237-307)||(20814604-20814674)
chr4 (236-286)||(22720602-22720652)
chr4 (243-297)||(29223943-29223997)
chr4 (237-307)||(31933722-31933792)
chr4 (237-286)||(2198043-2198092)
chr4 (249-298)||(3504084-3504133)
chr4 (242-315)||(14450957-14451030)
chr4 (243-304)||(14451035-14451096)
chr4 (264-317)||(18327999-18328052)
chr4 (264-317)||(18437347-18437400)
chr4 (268-317)||(19754241-19754290)
chr4 (268-317)||(19785516-19785565)
chr4 (242-307)||(29006910-29006975)
chr4 (264-317)||(31914393-31914446)
chr4 (254-315)||(49745530-49745590)
chr4 (237-282)||(52673593-52673638)
chr4 (268-308)||(5289728-5289768)
chr4 (237-297)||(22020111-22020171)
chr4 (254-306)||(25856023-25856074)
chr4 (271-307)||(33520616-33520652)
chr4 (254-314)||(34166125-34166184)
chr4 (254-306)||(46779370-46779421)
chr4 (254-306)||(50038463-50038514)
chr4 (254-306)||(50045685-50045736)
chr4 (246-286)||(52673694-52673734)
chr4 (243-303)||(54106476-54106536)
chr4 (247-291)||(54532844-54532888)
[»] chr2 (73 HSPs)
chr2 (242-315)||(5574177-5574250)
chr2 (248-315)||(30902340-30902407)
chr2 (242-315)||(38594344-38594417)
chr2 (242-315)||(38597940-38598013)
chr2 (248-315)||(34248421-34248488)
chr2 (246-304)||(25278178-25278236)
chr2 (242-304)||(38594422-38594484)
chr2 (242-304)||(38598018-38598080)
chr2 (242-297)||(43426713-43426768)
chr2 (242-304)||(3887911-3887973)
chr2 (246-315)||(43426632-43426701)
chr2 (242-298)||(20504243-20504299)
chr2 (242-298)||(34248499-34248555)
chr2 (235-303)||(44274620-44274688)
chr2 (242-297)||(5574110-5574165)
chr2 (246-304)||(1981062-1981120)
chr2 (249-315)||(3887840-3887906)
chr2 (242-315)||(1961309-1961382)
chr2 (242-307)||(24457100-24457165)
chr2 (242-315)||(27331826-27331899)
chr2 (243-304)||(30902274-30902335)
chr2 (242-298)||(6566999-6567055)
chr2 (253-317)||(8554683-8554746)
chr2 (242-298)||(22373610-22373666)
chr2 (244-315)||(22373677-22373749)
chr2 (254-317)||(5094905-5094967)
chr2 (243-306)||(21488103-21488166)
chr2 (242-316)||(38465855-38465929)
chr2 (242-304)||(38618176-38618238)
chr2 (244-294)||(42530494-42530544)
chr2 (242-307)||(9431197-9431262)
chr2 (242-315)||(26234091-26234164)
chr2 (242-315)||(37195052-37195125)
chr2 (242-307)||(41824335-41824400)
chr2 (246-294)||(6566919-6566967)
chr2 (242-298)||(19612941-19612997)
chr2 (242-306)||(32143406-32143470)
chr2 (256-312)||(43732152-43732208)
chr2 (242-297)||(1980985-1981040)
chr2 (242-293)||(3121511-3121562)
chr2 (268-315)||(5144335-5144382)
chr2 (254-317)||(5204905-5204967)
chr2 (249-304)||(7837092-7837147)
chr2 (256-315)||(26003502-26003561)
chr2 (242-313)||(45035852-45035923)
chr2 (244-286)||(10495740-10495782)
chr2 (244-298)||(11342054-11342108)
chr2 (254-316)||(24971218-24971279)
chr2 (237-307)||(27964279-27964349)
chr2 (254-316)||(34438811-34438872)
chr2 (242-303)||(3123982-3124043)
chr2 (243-304)||(8383263-8383324)
chr2 (229-286)||(8996849-8996906)
chr2 (246-307)||(15119781-15119842)
chr2 (242-315)||(15119844-15119917)
chr2 (242-315)||(19950117-19950190)
chr2 (268-317)||(29771744-29771793)
chr2 (242-307)||(29819770-29819835)
chr2 (254-315)||(40340536-40340596)
chr2 (242-315)||(41805274-41805347)
chr2 (268-317)||(42579045-42579094)
chr2 (237-286)||(43100744-43100793)
chr2 (242-286)||(3098222-3098266)
chr2 (247-307)||(7079445-7079505)
chr2 (254-306)||(10041555-10041606)
chr2 (247-291)||(19210823-19210867)
chr2 (242-306)||(19950193-19950257)
chr2 (230-298)||(23143474-23143542)
chr2 (230-298)||(23555264-23555332)
chr2 (1-54)||(24361503-24361558)
chr2 (242-286)||(25270952-25270996)
chr2 (254-306)||(25668487-25668538)
chr2 (247-307)||(44587718-44587778)
[»] scaffold0024 (2 HSPs)
scaffold0024 (242-304)||(120223-120285)
scaffold0024 (242-306)||(120145-120209)
[»] chr6 (46 HSPs)
chr6 (242-315)||(30460680-30460753)
chr6 (242-304)||(17773579-17773641)
chr6 (242-315)||(31536311-31536384)
chr6 (244-315)||(21506530-21506601)
chr6 (242-304)||(21506463-21506525)
chr6 (248-315)||(17268019-17268086)
chr6 (245-304)||(21998117-21998176)
chr6 (241-304)||(31536392-31536455)
chr6 (242-315)||(17773501-17773574)
chr6 (242-295)||(28577601-28577654)
chr6 (242-305)||(30397725-30397788)
chr6 (242-304)||(28577679-28577741)
chr6 (242-304)||(30397802-30397864)
chr6 (246-307)||(4844293-4844354)
chr6 (242-315)||(8146016-8146089)
chr6 (242-298)||(6560741-6560797)
chr6 (242-298)||(18097060-18097116)
chr6 (256-298)||(4844359-4844401)
chr6 (242-296)||(6894814-6894868)
chr6 (242-304)||(21998039-21998101)
chr6 (242-307)||(6560657-6560722)
chr6 (264-317)||(12349880-12349933)
chr6 (242-315)||(28555014-28555087)
chr6 (242-307)||(31398226-31398291)
chr6 (242-315)||(31398293-31398366)
chr6 (237-306)||(31632183-31632252)
chr6 (242-298)||(8449660-8449716)
chr6 (242-298)||(8458464-8458520)
chr6 (242-306)||(14310597-14310661)
chr6 (244-304)||(17268091-17268151)
chr6 (242-297)||(8363616-8363671)
chr6 (242-296)||(2988799-2988853)
chr6 (237-307)||(3203746-3203816)
chr6 (242-312)||(13276486-13276556)
chr6 (237-307)||(16121040-16121110)
chr6 (242-315)||(10258371-10258444)
chr6 (242-303)||(13277101-13277162)
chr6 (245-298)||(13281537-13281590)
chr6 (242-303)||(13462933-13462994)
chr6 (246-315)||(13506838-13506907)
chr6 (242-307)||(28554947-28555012)
chr6 (243-315)||(11637171-11637243)
chr6 (242-306)||(26527266-26527330)
chr6 (244-304)||(30460615-30460675)
chr6 (271-315)||(33122922-33122966)
chr6 (250-290)||(33123103-33123143)
[»] scaffold0007 (2 HSPs)
scaffold0007 (247-315)||(246800-246868)
scaffold0007 (242-298)||(246879-246935)
[»] scaffold0039 (2 HSPs)
scaffold0039 (244-315)||(54455-54526)
scaffold0039 (242-298)||(54388-54444)
[»] scaffold0536 (2 HSPs)
scaffold0536 (230-315)||(3938-4023)
scaffold0536 (242-304)||(4028-4090)
[»] scaffold0047 (3 HSPs)
scaffold0047 (242-305)||(61239-61302)
scaffold0047 (242-304)||(61163-61225)
scaffold0047 (254-306)||(65933-65984)
[»] scaffold0027 (2 HSPs)
scaffold0027 (242-304)||(17167-17228)
scaffold0027 (243-297)||(17251-17306)
[»] scaffold0236 (1 HSPs)
scaffold0236 (264-317)||(13717-13770)
[»] scaffold0020 (1 HSPs)
scaffold0020 (242-307)||(139371-139436)
[»] scaffold0172 (1 HSPs)
scaffold0172 (265-315)||(11607-11657)
[»] scaffold0149 (1 HSPs)
scaffold0149 (242-307)||(24681-24746)
[»] scaffold0050 (1 HSPs)
scaffold0050 (242-315)||(6213-6286)
[»] scaffold0635 (1 HSPs)
scaffold0635 (254-306)||(5464-5515)
[»] scaffold0631 (1 HSPs)
scaffold0631 (242-294)||(4347-4399)
[»] scaffold0009 (1 HSPs)
scaffold0009 (243-315)||(7724-7796)


Alignment Details
Target: chr3 (Bit Score: 124; Significance: 9e-64; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 44592882 - 44592759
Alignment:
Q  115 acaatttaaactattagatgcactctctcaaggctcacattcaattaaaattgtggtgtagtgtggagaatacataggctaccattgaatttacttattt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44592882 acaatttaaactattagatgcactctctcaaggctcacattcaattaaaattgtggtgtagtgtggagaatacataggctaccattgaatttacttattt 44592783  T
Q  215 tattttatccgtttaaatattgta 238  Q
    ||||||||||||||||||||||||    
T  44592782 tattttatccgtttaaatattgta 44592759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44593033 - 44592918
Alignment:
Q  1 taatgtgagtatgagagagaaagtgttaaaagttatacaaatatcatttctctatgttaaaattttgagttaagatgatttgtccaattatacttgtaac 100  Q
    |||| ||||||||||||||||| |  |||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  44593033 taatatgagtatgagagagaaaattctaaaagttgtacaaatataatttctctatattaaaattttgagttaagatgacttgtccaattatacttgtaac 44592934  T
Q  101 acattgatccatgtac 116  Q
    ||||||||||||||||    
T  44592933 acattgatccatgtac 44592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 52168269 - 52168346
Alignment:
Q  228 taaatattgtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtgg 305  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52168269 taaatatcgtacaccctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgtatgtgg 52168346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 29720216 - 29720143
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||| |||||||    
T  29720216 cctccggtcactaatataagcaaaaattcactttttaaatacatttaattaatgatgtatgtggtctttattat 29720143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 38455305 - 38455243
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  38455305 cctccggtcactaatataaacaaaaatttactttttagatacatttaattaatgatgtatgtg 38455243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 29512271 - 29512198
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  29512271 cctccggttactaacataagcaaaaatttattttttagatacatttaattaatgatgtatgtggtctttattat 29512198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 36362604 - 36362677
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||| ||||||||||||||||    
T  36362604 cctccggtcactaatataagcaaaaatcaactctttaaatacatttaattaatgatgtatgtggtccttattat 36362677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 50260933 - 50261006
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||||    
T  50260933 cctccggttactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattat 50261006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 51239243 - 51239316
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| || |||||||  ||||||||||||||||    
T  51239243 cctccggtcactaatataagcaaaaatctactctttagatacattcaactaatgatatatgtggtccttattat 51239316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 52931642 - 52931714
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| | | |||||||||||| ||||||||||| |||||||| |||||||    
T  52931642 ctccggtcactaatataagcaaaaattcattctttagatacattcaattaatgatgtatgtggtctttattat 52931714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 29565109 - 29565171
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||||||||||| |||||    
T  29565109 cctccggtcactaatataagcaaaaatcaattttttagatacatttaattaatgatgtatgtg 29565171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 51239383 - 51239321
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||||    
T  51239383 cctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtg 51239321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 29565249 - 29565176
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||| ||||||||||||||||| |||||||| ||||||| ||||||||||  |||||||| |||||||    
T  29565249 cctccggtcattaatataagcaaaaattcactttttacatacattcaattaatgatatatgtggtctttattat 29565176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 38455165 - 38455238
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||| ||||||||||||||||  |||||||||||||||| | ||||||||| |||||||| |||||||    
T  38455165 cctccggtcattaatataagcaaaaatccactttttagatacattaatttaatgatgtatgtggtctttattat 38455238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 51617471 - 51617398
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| |||||||| || |||||||| |||||||    
T  51617471 cctccggtcactaatataagcaaaattccactttttagatacattcaattaatgttgtatgtggtctttattat 51617398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 42449110 - 42449178
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||| || |||||||    
T  42449110 ggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctttattat 42449178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 21404034 - 21403963
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |  ||||||||||||| ||||||||||| |||||||| |||||||    
T  21404034 cctccggtcactaatataagcaaaaatcca--ttttagatacattcaattaatgatgtatgtggtctttattat 21403963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 33412605 - 33412543
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||| |||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  33412605 cctccagtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 33412543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 41349660 - 41349722
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||| |||||    
T  41349660 cctccggtcactaatataagcaaaaattcacttttaaaatacattcaattaatgatgtatgtg 41349722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 41349801 - 41349727
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttacttttt-agatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||||| |||||||    
T  41349801 cctccggtcactaatataagcaaaaatccatttttttagatacattcaattaatgatgtatgtggtctttattat 41349727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 51617331 - 51617393
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||| |||||    
T  51617331 cctccggtcactaatataaccaaaaatccactttttagatacattcaattaatgatgtatgtg 51617393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 52931813 - 52931751
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||| |||||    
T  52931813 cctccggtcactgatataagtaaaaatctactttttagatacattcaattaatgatgtatgtg 52931751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 10872812 - 10872739
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||||||||  |||||||| |||| ||||||||||| || ||||| |||||||    
T  10872812 cctccggtcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattat 10872739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 12744901 - 12744974
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| |||||||||||| |||| |||||||| |||| ||||||||||| || ||||| |||||||    
T  12744901 cctccggtcactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattat 12744974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 32758966 - 32759039
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||| ||||||||  ||||||||| |||||||||| ||||||||||||||| | |||||| |||||||    
T  32758966 cctccggtcattaatataaataaaaatttattttttagatatatttaattaatgatgtacgtggtctttattat 32759039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 52168423 - 52168350
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||| ||| ||||||||||||  |||||||||||||||| | ||||||||| |||||||| |||||||    
T  52168423 cctccggtcattaacataagcaaaaatccactttttagatacattaatttaatgatgtatgtggtctttattat 52168350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 18940108 - 18940044
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||| |||||||||||||||||||||||  ||||| ||||||| ||||||||||| ||||||||    
T  18940108 ctccgatcactaatataagcaaaaatttatattttatatacattcaattaatgatgtatgtggtc 18940044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 36362738 - 36362682
Alignment:
Q  248 gtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  36362738 gtcattaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtg 36362682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 315
Target Start/End: Original strand, 52315400 - 52315463
Alignment:
Q  252 ctaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||  |||||||||||| ||| ||||||||||| |||||||| |||||||    
T  52315400 ctaatataagcaaaaatccactttttagatatattcaattaatgatgtatgtggtctttattat 52315463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 17552477 - 17552539
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||| |||||| | ||||||| ||||||| ||| |||||    
T  17552477 cctccggtcactaatataagcaaaaattcacttttaaaatacattcaattaataatgtatgtg 17552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 52315529 - 52315468
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||| |||||| |||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  52315529 ctccgatcactagtataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 52315468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 12568458 - 12568514
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||| ||| ||||    
T  12568458 cctccggtcactaatataaacaaaaatctactttttaaatacatttaactaaagatg 12568514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 13544922 - 13544978
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||| ||| ||||    
T  13544922 cctccggtcactaatataaacaaaaatctactttttaaatacatttaactaaagatg 13544978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 22099781 - 22099841
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||| ||||||| ||| |||||    
T  22099781 tccggtcactaatttaaacaaaaatctactttttagatacattcaattaataatgtatgtg 22099841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 22173797 - 22173857
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||| ||| |||||||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  22173797 tccgatcattaatataagcaaaaatctacattttagatacattcaattaatgatgtatgtg 22173857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 32759099 - 32759051
Alignment:
Q  249 tcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  32759099 tcactaatataaataaaaatttactttttagatatatttaattaatgat 32759051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 34205691 - 34205628
Alignment:
Q  253 taatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||  ||||||| |||||| |||||||||||||||| ||||||||| ||||||||    
T  34205691 taatataagcaaat-tttacttcttagattcatttaattaatgatgtatgtggtccatattatga 34205628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 42449243 - 42449183
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||| ||||||||||| ||||||| || |||||| ||||||| |||||||||||||||||    
T  42449243 tccggccactaatataaacaaaaatatattttttaaatacattcaattaatgatgaatgtg 42449183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 18480898 - 18480949
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||| | |||||||||||||||| ||||||||| ||||||    
T  18480898 aaaatttactttttaggttcatttaattaatgatgtatgtggtccatattat 18480949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 18939970 - 18940025
Alignment:
Q  249 tcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||| ||||||| | |||||| ||||||||||||||||||| |||||    
T  18939970 tcactaatataagtaaaaattcattttttaaatacatttaattaatgatgtatgtg 18940025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 26104767 - 26104830
Alignment:
Q  235 tgtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||| |||| |||||||||||||||||||||||||| |||||| | |||| | |||||||||    
T  26104767 tgtactccctctggtcactaatataagcaaaaatttacattttaggttcattcatttaatgatg 26104830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 21403897 - 21403958
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||| |||||||||||| ||||||| ||||||||||||| ||| ||||||||||| |||||    
T  21403897 cctccgatcactaatataaacaaaaatctactttttagata-attcaattaatgatgtatgtg 21403958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 33412466 - 33412527
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||| |||||||| |||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  33412466 cctctggtcacta-tataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 33412527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 8439258 - 8439323
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| ||||||||    
T  8439258 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtc 8439323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 12745037 - 12744976
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||| |||||||||||||| || ||||||||||||| | | ||||||| ||||||||    
T  12745037 cggtcactattataagcaaaaattaacattttagatacattcattaaatgatgtatgtggtc 12744976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 22153188 - 22153147
Alignment:
Q  253 taatataagcaaaaatttactttttagatacatttaattaat 294  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  22153188 taatataaataaaaatttactttttagatacatttaattaat 22153147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 25881276 - 25881211
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| ||||||||    
T  25881276 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtc 25881211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 38677565 - 38677638
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  38677565 cctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattat 38677638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 40470422 - 40470491
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||| ||||||||| |||| | | ||||| | |||| ||| |||||||    
T  40470422 cggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgtagtctttattat 40470491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 42595864 - 42595804
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| ||||||||| ||||||    
T  42595864 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggtccatattat 42595804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 52215880 - 52215953
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||  |||| |||||| || || || |||||||    
T  52215880 cctccggtcactattataagcaaaaatttacattttagattcatgcaattgatgatgtatatgatctttattat 52215953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 29720279 - 29720219
Alignment:
Q  252 ctaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttat 312  Q
    |||||||||||||||||| | ||||||||| |||| ||||||||||  |||||||| ||||    
T  29720279 ctaatataagcaaaaattcattttttagatgcattcaattaatgatatatgtggtctttat 29720219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 9492690 - 9492749
Alignment:
Q  256 tataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||| ||||||||||| ||||||||  ||||||||||| ||| |||||||| |||||||    
T  9492690 tataaacaaaaatttacattttagatttatttaattaattatgtatgtggtctttattat 9492749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 22153059 - 22153114
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    |||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  22153059 cctccggttattaatataaacaaaaatctactttttaaatatatttaattaatgat 22153114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 29720076 - 29720131
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    ||||||||||||||||||| |||||||  ||||||||||| |||| ||||| ||||    
T  29720076 cctccggtcactaatataatcaaaaatccactttttagatgcattcaattattgat 29720131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 50261074 - 50261011
Alignment:
Q  242 cctccggtcactaatataagca-aaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||| |||||| |||||| ||||||||| | |||| |||| |||||    
T  50261074 cctccggtcactaatataagcaaaaaattcacttttaagatacattcatttaaggatgtatgtg 50261011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 53718024 - 53717962
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||  |||||||||||| | |||| ||||||||||| ||||||||| ||||||||    
T  53718024 aatataagcaaat-tttactttttaggttcattcaattaatgatgtatgtggtccatattatga 53717962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 22497089 - 22497039
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaat 294  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| |||||||    
T  22497089 tccggtcactaataaaagcaaaactttacattttagattcattcaattaat 22497039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 29076652 - 29076599
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtcc 308  Q
    ||||||||||||| || ||||||||||| |||| ||||||||||| |||||||||    
T  29076652 aatataagcaaaa-ttgactttttagattcattcaattaatgatgtatgtggtcc 29076599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31300869 - 31300815
Alignment:
Q  1 taatgtgagtatgagagagaaagt-gt-taaaagttatacaaatatcatttctct 53  Q
    |||| ||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  31300869 taatatgagtatgagagagaaagttgtctaaaagttgtacaaatatcatttctct 31300815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 36566773 - 36566719
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||| ||||||||||| ||| |||||||||| |||| ||| |||||||    
T  36566773 tccggtcactattataagcaaaagttttctttttagattcattcaataaatgatg 36566719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 334801 - 334732
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||| |||||| |||| ||||| ||| |||| |||| ||||||||||| |||| ||| |||||||    
T  334801 cggtcactattataagaaaaattttacctttaagattcattgaattaatgatgtatgtagtctttattat 334732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 2128501 - 2128436
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||| ||||||| |||||||||||||| |  |||||||| |||| ||| ||||||| ||||||||    
T  2128501 cctccagtcactattataagcaaaaattcatgttttagattcattcaataaatgatgtatgtggtc 2128436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 8126143 - 8126203
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||||| |||||||||||| ||| ||||| ||| ||||||    
T  8126143 aatataagcaaat-tttactttttagattcatttaattaattatgtatgtgatccatattat 8126203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 8504850 - 8504923
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||||| ||| |||||||| |||| | ||| ||||| |  ||||| |||||||    
T  8504850 cctccggtcactattataagcaaaaatctacattttagattcattcatttattgatgcacatggtctttattat 8504923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 22456329 - 22456276
Alignment:
Q  233 attgtactacctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||  ||||||||||||||||| |||||||||||  ||||||||| ||||    
T  22456329 attgtacaccctccggtcactaatatcagcaaaaatttgatttttagattcatt 22456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 25881136 - 25881209
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| |  ||||| |||||||    
T  25881136 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgcacatggtctttattat 25881209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 35760853 - 35760804
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||| |||||||||||| ||| ||||||| | ||||||||    
T  35760853 tttactttttagattcatttaattaataatgtatgtggttcatattatga 35760804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 40639849 - 40639784
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| |||||||||||||| || ||||| || |||| | | ||||||| ||||||||    
T  40639849 cctccggtcactattataagcaaaaattaacattttaaattcattcattaaatgatgtatgtggtc 40639784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 105374 - 105434
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||| | ||| |||||||| ||||||||||| |||| ||| ||||||| |||||    
T  105374 tccggtcactattgtaaacaaaaattcactttttagattcattgaataaatgatgtatgtg 105434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 331938 - 331894
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||| |||||||||||||| || |||||||| ||||    
T  331938 cctccggtcactattataagcaaaaattaacattttagattcatt 331894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 7882281 - 7882325
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||| |||||||||||||| || |||||||| ||||    
T  7882281 cctccggtcactattataagcaaaaattaacattttagattcatt 7882325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 8439398 - 8439342
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||||||||||||||||||| |||  |||||| | |||| | |||||||||    
T  8439398 cctccggtcactaatataagcaaaaaattatattttaggttcattcatttaatgatg 8439342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 9170112 - 9170156
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||| |||||||||||| |||| |||||||| ||||    
T  9170112 cctccggtcactattataagcaaaaaattacattttagattcatt 9170156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 21217166 - 21217210
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||| ||||||||||||| ||| |||||||| ||||    
T  21217166 cctccggtcactattataagcaaaaatctacattttagattcatt 21217210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 32589432 - 32589380
Alignment:
Q  265 aaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||||| | |||| ||||||||||| ||||||||| || |||||    
T  32589432 aaatttactttttaggttcattcaattaatgatgtatgtggtccataatatga 32589380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 32833793 - 32833745
Alignment:
Q  269 ttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||  ||| ||||||||||| ||||||||| ||||||||    
T  32833793 ttactttttagattaattcaattaatgatgtatgtggtccatattatga 32833745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 34903719 - 34903675
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaatt 291  Q
    |||||||| ||||||||||||||||| ||||| || |||||||||    
T  34903719 ggtcactattataagcaaaaatttacattttaaattcatttaatt 34903675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 37492381 - 37492437
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||| |||||| |||||||  ||||||||| |||||||||||||| |||||| ||||    
T  37492381 cctcaggtcacaaatataaataaaaatttattttttagatacattcaattaacgatg 37492437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 40470558 - 40470514
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||||||||||||||| |||  ||||||||| ||||    
T  40470558 cctccggtcactaatataagcaaaagtttgatttttagattcatt 40470514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 47342709 - 47342658
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||| |||||||||||| | |||||| ||||||||| |||||||    
T  47342709 aatataagcaaaa-tttactttttaggttcatttatttaatgatgtatgtggt 47342658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 48191715 - 48191779
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||| ||||| |||||||| || |||||||| |||| | | ||||||| |||||||    
T  48191715 cctccggtcactattataaacaaaaattaacattttagattcattcattaaatgatgtatgtggt 48191779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 9056161 - 9056088
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  9056161 cctccggtcactaatataagcaaaaattcactttttagatacatttaattaatgatgtatgtggtctttattat 9056088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 1739705 - 1739644
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1739705 cctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgt 1739644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 14381238 - 14381311
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||||    
T  14381238 cctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattat 14381311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 40098900 - 40098827
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||||    
T  40098900 cctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattat 40098827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 26014574 - 26014642
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  26014574 ggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattat 26014642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 40098760 - 40098815
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  40098760 cctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgat 40098815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 9056021 - 9056083
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  9056021 cctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 9056083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 13211239 - 13211312
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||||| ||||||||| ||||||||| |||||||||||||||||||||||||  |||||||| |||||||    
T  13211239 cctctggtcattaatataagtaaaaatttattttttagatacatttaattaatgatatatgtggtctttattat 13211312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 7377556 - 7377627
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||  |||||||||||||| |||||||||||||||| ||||||||||| |||||| | |||||||    
T  7377556 tccggtcactggtataagcaaaaattcactttttagatacattcaattaatgatgtatgtgggctttattat 7377627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 9808506 - 9808439
Alignment:
Q  248 gtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||| ||| |||||||| |||||||    
T  9808506 gtcattaatataagcaaaaattcattttttagatacatttaattaattatgtatgtggtctttattat 9808439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 14381378 - 14381316
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||| |||||    
T  14381378 cctccggtcactaatataaacaaaaatccactttttagatacattcaattaatgatgtatgtg 14381316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 5888482 - 5888403
Alignment:
Q  236 gtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| |||||||| ||||| ||||||||||||| |||||| ||||| |||| ||||||||||| || ||||| |||||||    
T  5888482 gtacaacctccgggcactattataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattat 5888403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 33574927 - 33574864
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtgg 305  Q
    ||||||||||||||||||| |||||||  || ||||||||||||| ||||||||||| ||||||    
T  33574927 cctccggtcactaatataaacaaaaatccacattttagatacattcaattaatgatgtatgtgg 33574864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 10117108 - 10117054
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| |||||||||||    
T  10117108 tccggtcactattataagcaaaaatttacattttagattcattcaattaatgatg 10117054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 13211379 - 13211317
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||| ||||||||| |||||| || |||||||||||||| ||||||||||| |||||    
T  13211379 cctccggtcattaatataagtaaaaatctattttttagatacattcaattaatgatgtatgtg 13211317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 15285653 - 15285715
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||| ||||||||  ||||||||| |||||| ||||||||||||||||||| |||||    
T  15285653 cctccggtcattaatataaataaaaatttattttttaaatacatttaattaatgatgtatgtg 15285715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 15466022 - 15466084
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||| ||||||||  ||||||||| |||||| ||||||||||||||||||| |||||    
T  15466022 cctccggtcattaatataaataaaaatttattttttaaatacatttaattaatgatgtatgtg 15466084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 7258725 - 7258652
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| |||||| |||| ||||| |||||||| |||| ||||||||||| || ||||| |||||||    
T  7258725 cctccggtcactattataagtaaaattttacattttagattcattcaattaatgatgcatatggtctttattat 7258652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 11692048 - 11692120
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||| |||||||  |||||||||| ||| ||||||||||||| ||||| || |||||||    
T  11692048 cctccggtcactaatataaacaaaaatccactttttagacaca-ttaattaatgatgtatgtgatctttattat 11692120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 9808376 - 9808436
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||| |||||||||||| ||||||||||||||||| ||||||| |||||||| || |||||    
T  9808376 tccgatcactaatataaacaaaaatttactttttatatacattcaattaatggtgtatgtg 9808436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 313
Target Start/End: Original strand, 10934590 - 10934674
Alignment:
Q  229 aaatattgtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatt 313  Q
    |||||||||||  ||||||||||||| ||||||||||||  ||  ||||| || |||||||||||||||| |||| ||| |||||    
T  10934590 aaatattgtacaccctccggtcactattataagcaaaaaactatattttacattcatttaattaatgatgtatgtagtctttatt 10934674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 13228981 - 13228937
Alignment:
Q  271 actttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  13228981 actttttagatacatttaattaatgatgtatgtggtctttattat 13228937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 37716212 - 37716152
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||| ||||||  ||||||||| |||||||||||||| ||||||||||| |||||    
T  37716212 tccggtcactgatataaataaaaatttattttttagatacattcaattaatgatgtatgtg 37716152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 11295666 - 11295737
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||| |||||||||||||  || ||||||||||||| | | ||||||| |||||||| |||||||    
T  11295666 tccggtcactattataagcaaaaatcaacattttagatacattcattaaatgatgtatgtggtctttattat 11295737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 24820438 - 24820375
Alignment:
Q  241 acctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||| ||||||||||||||  |||||||||| |||| ||| ||||||| |||||    
T  24820438 acctccggtcactattataagcaaaaattctctttttagattcattcaataaatgatgtatgtg 24820375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 34194573 - 34194635
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| ||||||||| ||||||||    
T  34194573 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggtccatattatga 34194635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 2810162 - 2810108
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    |||||||||||||||||| ||||||| |||||| || ||||||||||| ||||||    
T  2810162 ctccggtcactaatataaacaaaaatctactttgtacatacatttaataaatgat 2810108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 6197964 - 6197922
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  6197964 tccggtcactattataagcaaaactttactttttagatacatt 6197922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 13496575 - 13496502
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||||||||| ||||| || |||| | ||||||||| |  ||||| |||||||    
T  13496575 cctccggtcactattataagcaaaaatttacattttaaattcattcatttaatgatgcacatggtctttattat 13496502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 24053597 - 24053662
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||||||||||||||||| |||  |||||| | |||| | ||||||||| ||||||||    
T  24053597 cctccggtcactaatataagcaaaaaattatattttaggttcattcatttaatgatgtatgtggtc 24053662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 26492427 - 26492374
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||||| | |||| ||||||||||| ||||||||| ||||||||    
T  26492427 aaaatttactttttaggttcattgaattaatgatgtatgtggtccatattatga 26492374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 31505178 - 31505113
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| ||||||||    
T  31505178 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtc 31505113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 31810474 - 31810409
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| |||||||| |||| | ||||||||| ||| ||||    
T  31810474 cctccggtcactaatataagcaaaaaactacattttagattcattcatttaatgatgtatgcggtc 31810409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 7377688 - 7377632
Alignment:
Q  249 tcactaatataagcaaaaatttacttttt-agatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||| | ||||| ||||||||| ||||||||||| |||||    
T  7377688 tcactaatataagcaaaaattcatttttttagatacattcaattaatgatgtatgtg 7377632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 13841852 - 13841904
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||| ||||||||||||||||||||||| || |||| ||| |||||||    
T  13841852 cggtcactattataagcaaaaatttactttttaaattcattcaataaatgatg 13841904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 28882664 - 28882728
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||| ||| ||||||| | |||||||||||| |||| ||| ||||||| |||||||    
T  28882664 cctccggtcactattatgagcaaaagtctactttttagattcattcaataaatgatgtatgtggt 28882728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 37716076 - 37716147
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||| ||||||||| |||| || |||||||||||| ||||||||||||||  |||| ||| |||||||    
T  37716076 tccgatcattaatataagtaaaatttcactttttagatatatttaattaatgatatatgtagtctttattat 37716147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 15285782 - 15285720
Alignment:
Q  253 taatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||| || | ||| |||||||    
T  15285782 taatataaacaaaaatttactttttaaatacattcaattaaggatgtatatagtctttattat 15285720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 15466151 - 15466089
Alignment:
Q  253 taatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||| || | ||| |||||||    
T  15466151 taatataaacaaaaatttactttttaaatacattcaattaaggatgtatatagtctttattat 15466089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 1744232 - 1744297
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||| ||  |||||  | |||||| ||||||||| || |||||    
T  1744232 cctccggtcactaatataagcaaaaatctatattttatgttcatttatttaatgatgtatatggtc 1744297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 7256913 - 7256962
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||| |||| ||||||| ||| ||||||||| ||||||||    
T  7256913 tttactttttagattcattcaattaataatgtatgtggtccatattatga 7256962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 10934743 - 10934678
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| |||||||||||||  || |||||||| |||| | | ||||||| ||||||||    
T  10934743 cctccggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtc 10934678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 13029454 - 13029393
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||||||||||||||||| |||  ||||||||| |||| | | ||||||| ||||    
T  13029454 cctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgt 13029393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 26014702 - 26014665
Alignment:
Q  248 gtcactaatataagcaaaaatttactttttagatacat 285  Q
    |||||||||||||||||||||  |||||||||||||||    
T  26014702 gtcactaatataagcaaaaatccactttttagatacat 26014665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 29424123 - 29424062
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||| |||||||||||||||| |  |||||||| |||| ||| ||||||| ||||    
T  29424123 cctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgt 29424062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 33070305 - 33070232
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||| | |||||||| |||| | |||||| || || ||||| |||||||    
T  33070305 cctccggtcactattataagcaaaattttgcattttagattcattcatttaatggtgtatatggtctttattat 33070232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 35063587 - 35063527
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| || ||||||||| | |||||||||||||||| ||||||| | ||||||    
T  35063587 aatataagcaaaa-ttgactttttaggttcatttaattaatgatgtatgtggttcatattat 35063527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 40716759 - 40716819
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| ||||||| | ||||||    
T  40716759 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggtacatattat 40716819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 42749055 - 42749116
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||||||||||||||||| |||  ||||||||| |||| | | ||||||| ||||    
T  42749055 cctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgt 42749116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 13290035 - 13290087
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaat 294  Q
    ||||||||||||| |||||||||||| |||| |||| ||| |||| |||||||    
T  13290035 cctccggtcactattataagcaaaaaattacattttggattcattcaattaat 13290087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 17087355 - 17087399
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||||||||||||||| |||  ||||||||| ||||    
T  17087355 cctccggtcactaatataagcaaaagtttgatttttagattcatt 17087399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 17087487 - 17087443
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||||||||||||||| |||  ||||||||| ||||    
T  17087487 cctccggtcactaatataagcaaaagtttgatttttagattcatt 17087443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 24471317 - 24471269
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaat 290  Q
    ||||||||||||| ||||| |||||||| || |||||||| ||||||||    
T  24471317 cctccggtcactattataaacaaaaattaacattttagattcatttaat 24471269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 27518455 - 27518399
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||| ||||| ||||||| ||| |||||||| |||| | |||||||||    
T  27518455 cctccggtcactattataaacaaaaatctacattttagattcattcatttaatgatg 27518399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 28939422 - 28939466
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaatt 291  Q
    |||||||| ||||||||||||||||| ||||| || |||||||||    
T  28939422 ggtcactattataagcaaaaatttacattttaaattcatttaatt 28939466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 29730718 - 29730762
Alignment:
Q  273 tttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||| ||| |||||||||||||||| ||||||||| ||||||||    
T  29730718 tttttggattcatttaattaatgatgtatgtggtccatattatga 29730762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 31505038 - 31505094
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | |||||||||    
T  31505038 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatg 31505094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 32484954 - 32485013
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatta 314  Q
    ||||||||||||  |||||||||||||| |||| ||||||| ||| ||||||||| |||||    
T  32484954 aatataagcaaat-tttactttttagattcattcaattaattatgtatgtggtccatatta 32485013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 42631792 - 42631843
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| |||||||    
T  42631792 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggt 42631843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 9e-27; HSPs: 94)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 26300111 - 26300184
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  26300111 cctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtggtctttattat 26300184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 42013822 - 42013895
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  42013822 cctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattat 42013895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 43446859 - 43446921
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43446859 cctccggttactaatataagcaaaaatttactttttagatacatttaattaatgatgtatgtg 43446921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 11262332 - 11262401
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  11262332 cggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattat 11262401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 19531441 - 19531368
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  19531441 cctccgatcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattat 19531368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 23914841 - 23914914
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||||    
T  23914841 cctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattat 23914914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 37944602 - 37944675
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| || |||||||    
T  37944602 cctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattat 37944675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 3851503 - 3851441
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||    
T  3851503 cctccggtcactaatataagcaaaaattcattttttagatacatttaattaatgatgtatgtg 3851441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 3851363 - 3851436
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| ||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||||    
T  3851363 cctccgatcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattat 3851436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 19531301 - 19531363
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  19531301 cctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 19531363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 37944738 - 37944680
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  37944738 cggtcactaatataagcaaaaatttattttttagatacattcaattaatgatgtatgtg 37944680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 42013962 - 42013900
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  42013962 cctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 42013900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 8961219 - 8961292
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||| ||||||| ||| |||||||| |||||||    
T  8961219 cctccagtcactaatataagcaaaaattcactctttagatacattcaattaataatgtatgtggtctttattat 8961292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 13311175 - 13311247
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||| ||||||||||| |||||||| |||||||    
T  13311175 cctccggtcactaatataagcaaaagtctactttt-agatacattcaattaatgatgtatgtggtctttattat 13311247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 26300251 - 26300195
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  26300251 cctccggtcactaatataagtaaaattttactttttagatacattcaattaatgatg 26300195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 38835532 - 38835587
Alignment:
Q  249 tcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||| |||||    
T  38835532 tcactaatataagcaaaaattcattttttagatacatttaattaatgatgtatgtg 38835587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 11795736 - 11795809
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  || |||||||| |||| ||||||||||| || ||||| |||||||    
T  11795736 cctccggtcactaatataagcaaaaatcaacattttagattcattcaattaatgatgtatatggtctttattat 11795809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 13157333 - 13157406
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||| ||||||||||||||||  |||||||||||| ||| ||||||||||| || ||||| |||||||    
T  13157333 cctccggtcattaatataagcaaaaatccactttttagatatattcaattaatgatgtatatggtctttattat 13157406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 15712261 - 15712188
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| ||| ||||||||||||||||  |||||||| ||||||| ||||||||||| |||||||| |||||||    
T  15712261 cctccgatcattaatataagcaaaaatcaactttttaaatacattcaattaatgatgtatgtggtctttattat 15712188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 11262466 - 11262406
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||| | ||| |||||||||| ||||||||||| |||||    
T  11262466 tccggtcactaatataagcaaaaattcattttgtagatacattcaattaatgatgtatgtg 11262406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 12646644 - 12646588
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||||| |||||||    
T  12646644 cctccggtcataaatataagcaaaaatttactttttagattcatttaataaatgatg 12646588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 35969128 - 35969192
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt-taattaatgatgaatgtgg 305  Q
    |||||||||||||||||||||||||||  ||||||||||||||||  ||||||||||| ||||||    
T  35969128 cctccggtcactaatataagcaaaaatccactttttagatacattcaaattaatgatgtatgtgg 35969192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 37870155 - 37870095
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||||| |  |||||||||| ||| |||||||||||||||||    
T  37870155 tccggtcactaatataagcaaaaatctcatttttagatatattcaattaatgatgaatgtg 37870095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 43447508 - 43447464
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  43447508 cctccggtcactaatataagcaaaaattcactttttagatacatt 43447464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 11172002 - 11172052
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaa 293  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  11172002 cctccggtcactaatataagcaaaaattta-tttttagatacattcaattaa 11172052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 35969267 - 35969196
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||||||||||||| ||||||| |||||||||||||||| |||||||| || |||| ||| |||||||    
T  35969267 tccgatcactaatataagtaaaaattcactttttagatacattcaattaatggtgtatgtagtctttattat 35969196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 23914981 - 23914919
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| | |||| |||| |||||    
T  23914981 cctccggtcactaatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtg 23914919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 15712122 - 15712183
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||| ||||||||||||||||  | |||||||||||||| ||||||||||| |||||    
T  15712122 ctccggtcattaatataagcaaaaatccattttttagatacattcaattaatgatgtatgtg 15712183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 25792986 - 25792921
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| |||||||||||||||||||||||| | |||| | | ||||||| ||||||||    
T  25792986 cctccggtcactattataagcaaaaatttactttttaggttcattcattaaatgatgtatgtggtc 25792921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 23042089 - 23042027
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||| |||||||||||| | |||| ||||||||||| ||||||||| ||||||||    
T  23042089 aatataagcaaaa-tttactttttaggttcattgaattaatgatgtatgtggtccatattatga 23042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 1098772 - 1098706
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||||| |||||||| ||| ||| ||||    
T  1098772 tactccctccggtcactattataagcaaaagtttattttttagattcatttaataaataatgtatgt 1098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5386137 - 5386084
Alignment:
Q  1 taatgtgagtatgagagagaaagt--gttaaaagttatacaaatatcatttctc 52  Q
    ||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  5386137 taatgtgagtatgagagagaaagttgtttaaaagttgtacaaatatcatttctc 5386084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 38835666 - 38835592
Alignment:
Q  242 cctccggtcactaatataagcaaaaattt-actttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||||||||||||||||||||| || |||||||| ||||||| ||||||||||| ||  |||| |||||||    
T  38835666 cctctggtcactaatataagcaaaaaattcactttttaaatacattcaattaatgatgtatacggtctttattat 38835592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 40100082 - 40100152
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| |||||| |||||| |||||||||||||| |||||||| || |||||||| |||||||  |||||||    
T  40100082 tactccctccgttcactattataagcaaaaattgactttttaaattcatttaataaatgatgtgtgtggtc 40100152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 71259 - 71332
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||||| ||  |||||||| |||| ||||||||||| || || || |||||||    
T  71259 cctccggtcactattataagcaaaaatctatattttagattcattcaattaatgatgtatatgatctttattat 71332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 13157467 - 13157411
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||| |||||||| | ||||| ||||||||||| |||||    
T  13157467 ggtcactaatataagcaaaaattcacttttta-aaacattcaattaatgatgtatgtg 13157411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 13311310 - 13311253
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||||||||||||| |||||| ||  ||||||||||||| ||||||||||| ||||    
T  13311310 cggtcactaatataagtaaaaatctatcttttagatacattcaattaatgatgtatgt 13311253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 25408681 - 25408612
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatt 313  Q
    ||||||||  ||||||||||||||||||  |||||||| |||| ||| ||||||| |||||||| |||||    
T  25408681 tccggtcataaatataagcaaaaatttatgttttagattcattcaataaatgatgtatgtggtctttatt 25408612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 26141755 - 26141828
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  26141755 cctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattat 26141828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 1996847 - 1996891
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||    
T  1996847 cctccggtcactaatataagcaaaaatttgatttttagattcatt 1996891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 1996988 - 1996944
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||    
T  1996988 cctccggtcactaatataagcaaaaatttgatttttagattcatt 1996944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 5259525 - 5259469
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||||||||||  ||| |||||||| |||| | |||||||||    
T  5259525 cctccggtcactaatataagcaaaaaactacattttagattcattcatttaatgatg 5259469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 6763837 - 6763781
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||||||||||||||||||||  | ||| ||||| |||| |||||||||||    
T  6763837 cctccggtcactaatataagcaaaaatccattttctagattcattcaattaatgatg 6763781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 12750118 - 12750174
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||| ||||||| ||||||||||  ||||||||||||| ||| |||||||    
T  12750118 cctccggtcacaaatataaacaaaaatttatgttttagatacattcaataaatgatg 12750174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 25358060 - 25358120
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||| |||||| ||||||||| |||| |||| |||| ||| |||||||||||||    
T  25358060 tccggtcactattataagtaaaaatttatttttaagattcattcaataaatgatgaatgtg 25358120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 25772154 - 25772198
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||    
T  25772154 cctccggtcactaatataagcaaaaatttgatttttagattcatt 25772198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 27314475 - 27314519
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||    
T  27314475 cctccggtcactaatataagcaaaaatttggtttttagattcatt 27314519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 41180353 - 41180297
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||||| |||||||||    
T  41180353 cctccggtcactaatataagcaaaaaactacattttaggttcatttatttaatgatg 41180297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 5226032 - 5226094
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||| || ||||||||||| |||| | ||||||||| ||||||||| ||||||||    
T  5226032 aatataagcaaaa-ttcactttttagattcattcatttaatgatgtatgtggtccatattatga 5226094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 5984121 - 5984050
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| || ||||||||||| ||| | |||||||| |||| ||||||||||| || ||||| |||||||    
T  5984121 tccggtcattattataagcaaaactttgcattttagattcattcaattaatgatgtatatggtctttattat 5984050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 14571021 - 14571083
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||  |||| ||||||||| |||| ||||||||||| ||||||||| ||||||||    
T  14571021 aatataagcaaat-tttattttttagattcattcaattaatgatgtatgtggtccatattatga 14571083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 21369400 - 21369338
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||| |||||||||||||| ||||   ||||||||| ||||||||| ||||||||    
T  21369400 aatataagcaaaa-tttactttttagattcattattttaatgatgtatgtggtccatattatga 21369338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 21945518 - 21945447
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| ||||||||  ||||||| ||||||| |||| ||| ||||||||||| || ||||| |||||||    
T  21945518 tccggtcattaatataaataaaaattcacttttttgatatattcaattaatgatgtatctggtctttattat 21945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 24433548 - 24433610
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||  ||||||||||||||  ||| ||||||||||| ||||||||| ||||||||    
T  24433548 aatataagcaaat-tttactttttagatttattgaattaatgatgtatgtggtccatattatga 24433610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 35969067 - 35969106
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  35969067 tttactttttagattcatttaattaatgatgtatgtggtc 35969106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 40515326 - 40515275
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacattta 288  Q
    |||| ||||||||||||| ||||||||||| || ||||||||||| ||||||    
T  40515326 tacttcctccggtcactattataagcaaaagttcactttttagattcattta 40515275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 43340437 - 43340488
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||| | |||| ||||||||||| ||||||||| ||||||    
T  43340437 aaaatttactttttaggttcattcaattaatgatgtatgtggtccatattat 43340488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 7313975 - 7313905
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| ||||||||||||| ||||||||||| || ||||||||| | || | ||| ||||||| ||||||||    
T  7313975 tactccctccggtcactattataagcaaaagttgactttttaggttcaatcaataaatgatgtatgtggtc 7313905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 12165298 - 12165348
Alignment:
Q  256 tataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||  || ||||||||||| |||||||||||||||| |||||||    
T  12165298 tataagcaaattttgactttttagattcatttaattaatgatgtatgtggt 12165348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 13654509 - 13654575
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtcc 308  Q
    ||||||||||||| |||||| ||| ||| ||||||||| | |||| ||| ||||||| |||||||||    
T  13654509 cctccggtcactattataagtaaatattgactttttaggttcattcaataaatgatgtatgtggtcc 13654575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 14064937 - 14064888
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||| |||||    
T  14064937 aatataagcaaaaatt-actttttagattcattcaattaatgatgtatgtg 14064888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 26045265 - 26045319
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatga 296  Q
    |||||||| |||| ||||||||||||||||  |||||||| |||| |||||||||    
T  26045265 cctccggttactattataagcaaaaatttatattttagattcattcaattaatga 26045319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 29807090 - 29807143
Alignment:
Q  253 taatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||| ||||||||    
T  29807090 taatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggtc 29807143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 42364215 - 42364293
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||| |||||||||||  ||||| ||||||||||||||||| ||||||| ||| | | ||| |||| ||| |||||||    
T  42364215 tactatctccggtcactgttataaacaaaaatttactttttaaatacattgaataattaatgtatgtagtctttattat 42364293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 42364358 - 42364316
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||| ||||||||||| || ||||||||||||||||    
T  42364358 tccggtcactattataagcaaaacttcactttttagatacatt 42364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 1180812 - 1180743
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatt 313  Q
    |||| |||| ||||||||||||||||||| |||||| | |||| ||| ||| ||| |||||||| |||||    
T  1180812 tccgctcacaaatataagcaaaaatttacgttttaggttcattcaataaataatgtatgtggtctttatt 1180743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 5240221 - 5240270
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||| ||||||||||||| ||||||||||| || | ||||||||||||||    
T  5240221 tactccctccggtcactattataagcaaaatttgattttttagatacatt 5240270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 5259385 - 5259450
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||  |||||| | |||| | ||||||||| ||||||||    
T  5259385 cctccggtcactaatataagcaaaaaactatattttaggttcattcatttaatgatgtatgtggtc 5259450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 8961354 - 8961297
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||| |||||||| ||||||| |||| |||| ||||||| ||||||||||| |||||    
T  8961354 ggtcattaatataaacaaaaatctactgtttaaatacattcaattaatgatgtatgtg 8961297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 13356106 - 13356143
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttag 279  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  13356106 cctccggtcactattataagcaaaattttactttttag 13356143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 13654645 - 13654592
Alignment:
Q  245 ccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||| |||||||||||||| |||||||| || |||| ||| |||||||    
T  13654645 ccggtcactattataagcaaaaattcactttttaaattcattcaataaatgatg 13654592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 14064836 - 14064885
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||| | |||| ||||||||||| ||||||||| ||||||||    
T  14064836 tttactttttaggttcattcaattaatgatgtatgtggtccatattatga 14064885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 14416419 - 14416479
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||| ||||||||| |||| ||||||||||| ||||||||| ||||||    
T  14416419 aatataagcaaat-tttattttttagattcattcaattaatgatgtatgtggtccatattat 14416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 18033495 - 18033422
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||||| ||| ||||||||  ||| | ||||||||| |  ||||| |||||||    
T  18033495 cctccggtcactattataagcaaaaatctacattttagatttattcatttaatgatgtacatggtctttattat 18033422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 21126632 - 21126693
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||| ||| ||||| |||| ||||||||  ||||| ||||||||| ||||||||    
T  21126632 cggtcactaatacaagtaaaaaattacattttagatttatttatttaatgatgtatgtggtc 21126693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 25408543 - 25408604
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||| |||||||||||||||| |  |||||||| |||| ||| ||||||| ||||    
T  25408543 cctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgt 25408604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 25777044 - 25776979
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| ||||||||||||| ||| |||||  | |||| ||| |||||| |||||||||    
T  25777044 cctccggtcactattataagcaaaaatataccttttaagttcattcaataaatgataaatgtggtc 25776979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 26141895 - 26141830
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||  || ||||| |||| | ||||||||| ||||||||    
T  26141895 cctccggtcactaatataagcaaaaaactatattctagattcattcatttaatgatgtatgtggtc 26141830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 26168201 - 26168261
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||| |||||| || |||||||| ||||||||| ||||||    
T  26168201 aatataagcaaat-tttactttttaggtacattcaactaatgatgtatgtggtccatattat 26168261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 32146840 - 32146900
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| |||||||||||| | |||||| ||||||||| | ||||||| ||||||    
T  32146840 aatataagcaaaa-tttactttttaggttcatttatttaatgatgtacgtggtccatattat 32146900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 37039714 - 37039767
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||||||| ||| || ||||||||| ||||||||  ||||||||    
T  37039714 aaaatttactttttagattcatctatttaatgatgcatgtggtctatattatga 37039767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 40515224 - 40515281
Alignment:
Q  239 ctacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatga 296  Q
    |||||||||||||||| |||||| |||| || ||||||||||| |||| ||| |||||    
T  40515224 ctacctccggtcactattataagtaaaagttgactttttagattcattcaataaatga 40515281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 41180213 - 41180278
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||| |||||||||||||||  ||| |||||| | |||| | |||||||||||| |||||    
T  41180213 cctccggtcattaatataagcaaaaaactacattttaggttcattcatttaatgatgaatatggtc 41180278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 13356277 - 13356213
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    |||||||||| || ||||||||||||| |||||||||  | |||| ||| ||||||| |||||||    
T  13356277 cctccggtcattattataagcaaaaatctactttttaagttcattcaataaatgatgtatgtggt 13356213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 14153374 - 14153442
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| ||||||||||||| ||||||||| || |||| | ||||||||| || || || |||||||    
T  14153374 ggtcactattataagcaaaaatctactttttatattcattcatttaatgatgcatatgatctttattat 14153442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 20019888 - 20019844
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||||||||||||||| |||  ||||||||| ||||    
T  20019888 cctccggtcactaatataagcaaaagtttgatttttagattcatt 20019844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 20367334 - 20367374
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtcc 308  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  20367334 tttactttttagattcattcaattaatgatgtatgtggtcc 20367374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 25772295 - 25772251
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||||||||||||||| |||  ||||||||| ||||    
T  25772295 cctccggtcactaatataagcaaaagtttgatttttagattcatt 25772251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 26221024 - 26221068
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||| || ||||| ||||| |||||||||||||||||||    
T  26221024 cctccggtcaatattataaacaaaactttactttttagatacatt 26221068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 33075065 - 33075117
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaat 294  Q
    ||||| ||||||||||||||||||| ||||  |||||||| |||| |||||||    
T  33075065 cctccagtcactaatataagcaaaactttatattttagattcattcaattaat 33075117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 33684178 - 33684134
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaatt 291  Q
    |||||||| ||||||||||||||||| ||||| || |||||||||    
T  33684178 ggtcactattataagcaaaaatttacattttaaattcatttaatt 33684134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 37067896 - 37067840
Alignment:
Q  251 actaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| ||||||||||||| ||| |||||||| || ||||||||||||| || |||||    
T  37067896 actattataagcaaaaatctacattttagattcaattaattaatgatgtatatggtc 37067840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 39126141 - 39126090
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| |||||||    
T  39126141 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggt 39126090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 43585622 - 43585571
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||| |||||||||||| | |||| ||||||||||| |||||||    
T  43585622 aatataagcaaaa-tttactttttaggttcattcaattaatgatgtatgtggt 43585571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 9e-27; HSPs: 106)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 31008259 - 31008332
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||    
T  31008259 cctccggtcactaatataagcaaaaatctactttttagatacatttaattaatgatgtatgtggtctttattat 31008332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 8258083 - 8258010
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  8258083 cctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattat 8258010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 639799 - 639872
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||||    
T  639799 cctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattat 639872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 6065601 - 6065528
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  ||| |||||||||||| ||||||||||| ||||||||||||||||    
T  6065601 cctccggtcactaatataagcaaaaatccactctttagatacattcaattaatgatgtatgtggtccttattat 6065528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 33604131 - 33604058
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||||    
T  33604131 cctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattat 33604058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 48022595 - 48022668
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||||    
T  48022595 cctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattat 48022668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 2353033 - 2352962
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||||||    
T  2353033 tccgatcactaatataagcaaaaatttattttttagatacatttaattaatgatgtatgtgctctttattat 2352962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 17490488 - 17490559
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatt 313  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||| |||||    
T  17490488 cctccggtcactaatataagcaaaaatccactttttagatacatttaattaatgatatatgtggtctttatt 17490559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 37734913 - 37734840
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||| |||| |||||||    
T  37734913 cctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgcggtctttattat 37734840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 4060311 - 4060255
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  4060311 cctccggtcactaatataagcaaaaatctactttttagatacatttaactaatgatg 4060255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 23944037 - 23944101
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    |||||||||||||||||||||||||||| | |||||||||||||| ||||||||||| |||||||    
T  23944037 cctccggtcactaatataagcaaaaattcattttttagatacattcaattaatgatgtatgtggt 23944101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 34658388 - 34658448
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  34658388 tccggtcactaatataagcaaaaattcacttttcagatacatttaattaatgatgtatgtg 34658448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 3384223 - 3384285
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  3384223 cctccggtcattaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 3384285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 6065461 - 6065523
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||| |||||    
T  6065461 cctccggtcactaatataagcaaaattctactttttagatacattcaattaatgatggatgtg 6065523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 37734773 - 37734835
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||||    
T  37734773 cctccggtcactaatataagcaaaaattcacttttaagatacattcaattaatgatgtatgtg 37734835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 5431479 - 5431415
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||    
T  5431479 ctccggtcactaatataagcaaaaattaactttttagattcattcaataaatgatgtatgtggtc 5431415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 315
Target Start/End: Complemental strand, 4602785 - 4602711
Alignment:
Q  241 acctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||  |||||||  |||||||    
T  4602785 acctccggtcactaatataagtaaaaattcattttttagatacattcaattaatgatatatgtggtatttattat 4602711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 8257943 - 8258005
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| ||||||| ||| |||||    
T  8257943 cctccggtcacaaatataagcaaaaattcactttttagatacattcaattaataatgtatgtg 8258005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 14418197 - 14418135
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| || |||||||| |||||    
T  14418197 cctccggtcattaatataagcaaaaattcactttttagatacattcaactaatgatgtatgtg 14418135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 40262606 - 40262535
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||  | ||||||||||||||||||| |||||||| |||||||    
T  40262606 cctccggtcactaatataagcaaaaatccacttt--aaatacatttaattaatgatgtatgtggtctttattat 40262535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 3384363 - 3384290
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||  ||||||| |||||||||||||||| |||| |||||| ||||| || |||||||    
T  3384363 cctccggtcactaatataaataaaaattcactttttagatacattcaattgatgatgtatgtgatctttattat 3384290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 27206759 - 27206832
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||| ||||||||||||||||||   |||||||||||||||| ||||||||||| |||| ||| |||||||    
T  27206759 cctccggccactaatataagcaaaaaaccactttttagatacattcaattaatgatgtatgtagtctttattat 27206832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 31008399 - 31008338
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||| ||||    
T  31008399 cctccggtcattaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 31008338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 27206899 - 27206843
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||||||||||||||||||||  ||| |||||||||||| |||||||||||    
T  27206899 cctccggtcactaatataagcaaaaatcaactatttagatacattcaattaatgatg 27206843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 1036027 - 1035972
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    |||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||    
T  1036027 cctccggtcactaatataagcaaaaattcactttctagattcattcaattaatgat 1035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 5856495 - 5856424
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||||||||||||||||||||  |||||||| ||||||| ||||||| ||| |||||||| |||||||    
T  5856495 tccgatcactaatataagcaaaaatccactttttaaatacattcaattaattatgtatgtggtctttattat 5856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 21321460 - 21321385
Alignment:
Q  240 tacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||| |||||||||||||  |||||| || |||||||||| ||||||||||||||| || ||||| |||||||    
T  21321460 tacctcctgtcactaatataaataaaaatatattttttagatatatttaattaatgatgtatatggtctttattat 21321385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 639939 - 639877
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| | |||| |||| |||||    
T  639939 cctccggtcactaatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtg 639877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 15439991 - 15439929
Alignment:
Q  253 taatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||| |||||||| ||||||| ||||||| ||| |||||||| |||||||    
T  15439991 taatataagcaaaaattgactttttaaatacattcaattaataatgtatgtggtctttattat 15439929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 35367618 - 35367556
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||| |||||||||||||  | |||||||||||||| ||||||||||| |||||    
T  35367618 cctccggtcactactataagcaaaaatccattttttagatacattcaattaatgatgtatgtg 35367556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 48022735 - 48022673
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| | |||| |||| |||||    
T  48022735 cctccggtcactaatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtg 48022673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 34954036 - 34953963
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| |||||| ||||||||||||||||  |||||||| |||| ||||||||||| || ||||| |||||||    
T  34954036 cctccgatcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattat 34953963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 38834606 - 38834667
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||| |||| ||| |||||||    
T  38834606 tactccctccggtcactattataagcaaaaatttattttttagattcattaaataaatgatg 38834667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 4060176 - 4060244
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||  |||||||||||| ||| ||||||| ||  |||||||| |||||||    
T  4060176 ggtcactaatataagcaaaaatccactttttagatatattcaattaataatatatgtggtctttattat 4060244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 19175728 - 19175664
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||| ||||||| ||||||||||||| |||||||||||| |||| ||| ||||||| |||||||    
T  19175728 cctccagtcactattataagcaaaaatctactttttagattcattcaataaatgatgtatgtggt 19175664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 315
Target Start/End: Complemental strand, 2349898 - 2349823
Alignment:
Q  241 acctccggtcactaatataagcaaaaatttacttttt-agatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| |||||||||||||||| |||||| || ||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  2349898 accttcggtcactaatataagtaaaaatctatttttttagatacattcaattaatgatgtatgtagtctttattat 2349823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 14214669 - 14214607
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||| |||||||||||| ||||||||||| | |||| ||| ||||||| |||||    
T  14214669 cctccggtcactattataagcaaaaacttactttttaggttcattcaataaatgatgtatgtg 14214607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 15439863 - 15439917
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    |||||||||||||||||| ||||||| || ||| |||||||||| ||||||||||    
T  15439863 ctccggtcactaatataaacaaaaatctattttgtagatacattcaattaatgat 15439917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 33603991 - 33604053
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||| | |||| |||| |||||    
T  33603991 cctccggtcactaatataaacaaaaattcacttttaagatacattcatttaaggatgtatgtg 33604053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 37255138 - 37255199
Alignment:
Q  253 taatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||| ||||||||| ||||||    
T  37255138 taatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggtccatattat 37255199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 39515110 - 39515060
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacattt 287  Q
    |||| |||||||||||||||||||||||||||| |||||| |||| |||||    
T  39515110 tactccctccggtcactaatataagcaaaaattcacttttcagattcattt 39515060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 52923323 - 52923389
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtcc 308  Q
    ||||||||||||| ||||||||||| || ||||||||| | |||| ||| ||||||| |||||||||    
T  52923323 cctccggtcactattataagcaaaatttcactttttaggttcattcaataaatgatgtatgtggtcc 52923389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 1358194 - 1358247
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||| ||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  1358194 aaaattgactttttaagtacatttaattaatgatgtatgtggtccatattatga 1358247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 1409189 - 1409124
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| ||||||||||||||  |||||||||| |||| ||| ||||||| ||| ||||    
T  1409189 cctccggtcactattataagcaaaaattatctttttagattcattcaataaatgatgtatgcggtc 1409124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 2349761 - 2349818
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||| |||||||  | |||||||||||||| ||||||||||| |||||    
T  2349761 ggtcactaatataaacaaaaatccattttttagatacattcaattaatgatgcatgtg 2349818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 5431342 - 5431395
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatga 296  Q
    |||||||||||| |||||||||||||| ||||||||||| |||| ||| |||||    
T  5431342 ctccggtcactattataagcaaaaattcactttttagattcattcaataaatga 5431395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 6508537 - 6508472
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||| |||||||||||||||||||||  |||||| | |||||| ||||| ||| ||||||||    
T  6508537 cctccggttactaatataagcaaaaatttatattttaggttcatttatttaataatgtatgtggtc 6508472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 14214550 - 14214603
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatg 295  Q
    ||||||||||||| |||||||||||||| ||||||||| | |||| ||||||||    
T  14214550 cctccggtcactattataagcaaaaattcactttttaggttcattcaattaatg 14214603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 33939437 - 33939364
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  33939437 cctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattat 33939364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 36040146 - 36040211
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| ||||||||    
T  36040146 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtc 36040211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 40262469 - 40262530
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||| |||||||  | |||||||||| ||| ||||||||||| |||||    
T  40262469 ctccggtcactaatataaacaaaaatccagtttttagatatattcaattaatgatgtatgtg 40262530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 45115310 - 45115237
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||||| ||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  45115310 cctccggtcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattat 45115237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 8338675 - 8338731
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||| ||||||||||||| ||| |||||||| |||| | |||||||||    
T  8338675 cctccggtcactattataagcaaaaatctacattttagattcattcatttaatgatg 8338731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 10256782 - 10256846
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||| |||||| |||||| ||||||| ||||||||||| |||| ||| ||||||| ||||||||    
T  10256782 ctccgatcactattataagaaaaaattcactttttagattcattcaataaatgatgtatgtggtc 10256846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 28725606 - 28725550
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||||| |||||||||    
T  28725606 cctccggtcactaatataagcaaaaaactacattttaggttcatttatttaatgatg 28725550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 29302064 - 29302108
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||    
T  29302064 cctccggtcactaatataagcaaaaatttgatttttagattcatt 29302108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 29302205 - 29302161
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||    
T  29302205 cctccggtcactaatataagcaaaaatttgatttttagattcatt 29302161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 6283673 - 6283610
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| ||||||||    
T  6283673 tccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtc 6283610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 11989447 - 11989376
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||| |||  ||||||||| |||| | | ||||||| |||| ||| |||||||    
T  11989447 tccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgtagtctttattat 11989376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 15351855 - 15351784
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatt 313  Q
    |||| |||||| ||||||||||||||| ||  |||||||| |||| ||| ||||||| |||||||| |||||    
T  15351855 cctctggtcacaaatataagcaaaaatctatgttttagattcattcaataaatgatgtatgtggtctttatt 15351784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 15998224 - 15998286
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||| ||||||| | ||||||||    
T  15998224 aatataagcaaaa-tttactttttagattcattcatttaatgatgtatgtggtacatattatga 15998286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 38468824 - 38468765
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||| |||||||| ||||||| |  ||||||||||||||||| ||||||| ||||    
T  38468824 tccggtcacaaatataagaaaaaattcatattttagatacatttaataaatgatgtatgt 38468765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 42761455 - 42761526
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| || ||||||||||| ||||| |||||||| |||| ||||||||||| || || || |||||||    
T  42761455 tccggtcattattataagcaaaactttacattttagattcattcaattaatgatgtatctgatctttattat 42761526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 4602645 - 4602699
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    |||| ||||||||||||| ||||| |  |||||||||||||||| ||||||||||    
T  4602645 ctcctgtcactaatataaacaaaattccactttttagatacattcaattaatgat 4602699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 12972709 - 12972763
Alignment:
Q  2 aatgtgagtatgagagagaaagt-gt-taaaagttatacaaatatcatttctcta 54  Q
    |||||||||||||||||||| || || |||||||| |||||||||||||||||||    
T  12972709 aatgtgagtatgagagagaatgttgtataaaagttgtacaaatatcatttctcta 12972763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 307
Target Start/End: Original strand, 34597527 - 34597585
Alignment:
Q  249 tcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||| |||||||||||||| ||||||||||| |||| ||  ||||||| ||||||||    
T  34597527 tcactattataagcaaaaattcactttttagattcattcaacaaatgatgtatgtggtc 34597585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 52183576 - 52183642
Alignment:
Q  242 cctccggtcactaatataagc-aaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||| ||||| |||| |||||| | |||| | ||||||||| ||||||||    
T  52183576 cctccggtcactaatataagcaaaaaaattacattttaggttcattcatttaatgatgtatgtggtc 52183642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 52923463 - 52923401
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||| |||||||| ||||||||||||| |||||||||| | |||| ||| ||||||| |||||    
T  52923463 cctcaggtcactattataagcaaaaatctactttttaggttcattcaataaatgatgtatgtg 52923401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 47826 - 47753
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||| |||||||||||||| |||  ||||||||| |||| | | ||||||| |||| ||| |||||||    
T  47826 cctccggtcattaatataagcaaaactttgatttttagattcattcattaaatgatgtatgtagtctttattat 47753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 5852815 - 5852755
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||| |||||| || |||||||| ||||||||| ||||||    
T  5852815 aatataagcaaat-tttactttttaggtacattcaactaatgatgtatgtggtccatattat 5852755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 6283535 - 6283608
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| |  ||||| |||||||    
T  6283535 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgcacatggtctttattat 6283608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 6758546 - 6758619
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||| | ||||| || |||| ||||||||||| || | ||| |||||||    
T  6758546 cctccggtcactattataagcaaaactttgcattttacattcattcaattaatgatgtatatagtctttattat 6758619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 9675961 - 9676014
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaat 290  Q
    |||| ||||||||||||| |||||| ||||||| ||||||||| | ||||||||    
T  9675961 tactccctccggtcactattataagtaaaaattaactttttaggttcatttaat 9676014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 13319964 - 13319923
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttacttttta 278  Q
    |||| ||||| ||||||| |||||||||||||||||||||||    
T  13319964 tactccctccagtcactattataagcaaaaatttacttttta 13319923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 15057657 - 15057722
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||| |||||| ||||||||||||  |||||||||||| |||| ||| | ||||| ||||||||    
T  15057657 cctccgatcactattataagcaaaaaactactttttagattcattgaatgagtgatgtatgtggtc 15057722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 15351715 - 15351776
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||| ||||||||||||||||||  ||||| || |||| ||| ||||||| ||||    
T  15351715 cctccggtcacaaatataagcaaaaatttatattttaaattcattcaataaatgatgtatgt 15351776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 16427035 - 16426975
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| || | ||||||||| |||| | ||||||||||||||||||| ||||||    
T  16427035 aatataagcaaaa-ttgattttttagattcattcatttaatgatgaatgtggtccatattat 16426975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 23575458 - 23575385
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||| ||||| |||| |||||| | |||| | ||||||||| || || || |||||||    
T  23575458 cctccggtcactaatataagtaaaaaattacattttaggttcattcatttaatgatgcatatgatctttattat 23575385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 34658522 - 34658453
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| | |||||||||||| | || |||||| ||||||| ||||||| ||| |||||||| |||||||    
T  34658522 cggtcattgatataagcaaaattctattttttaaatacattcaattaataatgtatgtggtctttattat 34658453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 39216103 - 39216164
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||||| ||||||||||| ||| | |||||||  |||| ||||||||||| ||||    
T  39216103 cctccggtcactattataagcaaaactttgcattttagactcattcaattaatgatgtatgt 39216164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 39940626 - 39940565
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||| ||| ||| ||| ||||    
T  39940626 cctccgatcactattataagtaaaaatttactttttagattcattcaataaataatgtatgt 39940565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 41161605 - 41161540
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||||||||||||||||| | || |||||  | |||| | ||||||||| ||||||||    
T  41161605 cctccggtcactaatataagcaaaaaataacattttaagttcattcatttaatgatgtatgtggtc 41161540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 46412828 - 46412763
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||| |||||| |||||| |||||||||| |||| ||| |||| ||||||||||| || |||||    
T  46412828 cctccgatcactattataagtaaaaatttacattttggattcattcaattaatgatgtatatggtc 46412763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 46517958 - 46518018
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||| |||||| || |||||||| ||||||||| ||||||    
T  46517958 aatataagcaaat-tttactttttaggtacattcaactaatgatgtatgtggtccatattat 46518018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 47912699 - 47912639
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| |||||||||||| | |||| | ||||||||| ||||||||| ||||||    
T  47912699 aatataagcaaaa-tttactttttaggttcattcatttaatgatgtatgtggtccatattat 47912639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 52112876 - 52112941
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| |||||||| ||||||||||| || |||||||| || |||| ||| ||||||| ||||||||    
T  52112876 cctcaggtcactattataagcaaaagttcactttttatattcattcaataaatgatgtatgtggtc 52112941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 3013615 - 3013683
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| |||||||||||| |||  ||||||||  ||| |||||||| || |||||||| |||||||    
T  3013615 ggtcactattataagcaaaaaattatattttagatttattcaattaatgttgtatgtggtctttattat 3013683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 3904250 - 3904198
Alignment:
Q  3 atgtgagtatgagagagaaagt-gttaaa-agttatacaaatatcatttctct 53  Q
    ||||||||||||||||||  || |||||| |||||||||||||||||||||||    
T  3904250 atgtgagtatgagagagatggttgttaaagagttatacaaatatcatttctct 3904198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 11324572 - 11324500
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||| ||||||||||||  ||||||| || ||||| || |||| ||||||||||| || ||||| |||||||    
T  11324572 ctccgatcactaatataaataaaaattaacattttaaattcattcaattaatgatgtatatggtctttattat 11324500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 11482593 - 11482521
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||| ||||||||||||  ||||||| || ||||| || |||| ||||||||||| || ||||| |||||||    
T  11482593 ctccgatcactaatataaataaaaattaacattttaaattcattcaattaatgatgtatatggtctttattat 11482521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 12062311 - 12062259
Alignment:
Q  265 aaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||| ||||||| | |||| ||||||||||| ||||||||| ||||||||    
T  12062311 aaatttattttttaggttcattgaattaatgatgtatgtggtccatattatga 12062259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 14891877 - 14891805
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||| ||||||||||||||||  ||||||||  ||  ||| ||||||| || ||||| |||||||    
T  14891877 ctccggtcactattataagcaaaaatttaaattttagatttatccaataaatgatgtatatggtctttattat 14891805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 17342347 - 17342403
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||  ||||||||||||||||| ||||| ||  ||||| |||||||||    
T  17342347 cctccggtcactgttataagcaaaaatttacattttacatttatttacttaatgatg 17342403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 18789842 - 18789886
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaatt 291  Q
    |||||||| ||||||||||||||||| ||||| || |||||||||    
T  18789842 ggtcactattataagcaaaaatttacattttaaattcatttaatt 18789886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 19175589 - 19175653
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||| |||||| |||| || ||||||||| | |||| ||| ||||||| ||||||||    
T  19175589 ctccggtcactattataagtaaaatttcactttttaggttcattcaataaatgatgtatgtggtc 19175653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 21305040 - 21305096
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||| |||| ||||||||  ||||||| | |||||||||||||| |||||||||||    
T  21305040 cctcccgtcattaatataaataaaaattcattttttagatacattcaattaatgatg 21305096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 24981846 - 24981902
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||||| |||||||||||||| || ||||||||||||| | | ||||||| ||||    
T  24981846 ggtcactattataagcaaaaattaacgttttagatacattcattaaatgatgtatgt 24981902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 32796886 - 32796838
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaat 290  Q
    |||||| |||||| ||||| |||||||| ||||||||||| ||||||||    
T  32796886 cctccgatcactattataaacaaaaattcactttttagattcatttaat 32796838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 35156265 - 35156309
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||||||||| |||||||||  ||||||||| ||||    
T  35156265 cctccggtcactaatataaacaaaaattttatttttagattcatt 35156309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 36040286 - 36040230
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | |||||||||    
T  36040286 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatg 36040230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 36486539 - 36486595
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||| |||||| ||||||||||||||||  |||||||| ||||| || |||||||    
T  36486539 cctccgttcactactataagcaaaaatttagattttagattcatttgatcaatgatg 36486595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 39181062 - 39181113
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| |||||||    
T  39181062 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggt 39181113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 39422085 - 39422137
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattatg 316  Q
    |||||||||||||||| | | || ||||||||||| ||||||||| |||||||    
T  39422085 aaaatttactttttaggttcgttcaattaatgatgtatgtggtccatattatg 39422137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 42914663 - 42914612
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||| || ||||||||||| |||||| ||||||||| |||||||    
T  42914663 aatataagcaaaa-ttcactttttagattcatttatttaatgatgtatgtggt 42914612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 48083644 - 48083592
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaat 294  Q
    ||||| ||||||||||||||||||| ||||  |||||||| |||| |||||||    
T  48083644 cctccagtcactaatataagcaaaactttatattttagattcattcaattaat 48083592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 49586089 - 49586145
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||| ||||||||||| ||||| ||||| || |||| | |||||||||    
T  49586089 cctccggtcactattataagcaaaagtttacattttaaattcattcatttaatgatg 49586145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 25079207 - 25079280
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  25079207 cctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgatccttattat 25079280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 38238783 - 38238857
Alignment:
Q  242 cctccggtcactaatataagcaaaaattt-actttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  38238783 cctccggtcactaatataagcaaaaatttcactttttagatacattcaattaatgatgtatgtggtctttattat 38238857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 34703583 - 34703510
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || ||||| |||||||    
T  34703583 cctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattat 34703510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 40417045 - 40416973
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || ||||| |||||||    
T  40417045 ctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattat 40416973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 38238924 - 38238862
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  38238924 cctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtg 38238862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 1706833 - 1706895
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||    
T  1706833 cctccggtcactaatataagtaaaaatttattttttagatacattcaattaatgatgtatgtg 1706895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 25079347 - 25079285
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| |||||    
T  25079347 cctccggtcactaatataaacaaaaatctactttttagatacattcaattaatgatgtatgtg 25079285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 18234484 - 18234423
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| |||||    
T  18234484 ctccggtcactaatataaacaaaaatttaatttttagatacattcaattaatgatgtatgtg 18234423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 45000737 - 45000668
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||| |||||| |||||||| |||||||    
T  45000737 cggtcactaatataagcaaaaatgtactttttagacacattcaattgatgatgtatgtggtctttattat 45000668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 4406422 - 4406490
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||| ||| |||||||    
T  4406422 ggtcactaatatatgcaaaaattcactttttagatacattcaattaatgatgtatgttgtctttattat 4406490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 22106672 - 22106740
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||| || |||||||||| ||| ||||||||||| |||||||| |||||||    
T  22106672 ggtcactaatataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattat 22106740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 40529679 - 40529611
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||| || |||||||||| ||| ||||||||||| |||||||| |||||||    
T  40529679 ggtcactaatataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattat 40529611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 716365 - 716303
Alignment:
Q  251 actaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatt 313  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || |||||    
T  716365 actaatataagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttatt 716303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 22281572 - 22281522
Alignment:
Q  253 taatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22281572 taatataagcaaaaatttactttttaaatacattgaattaatgatgaatgt 22281522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 27554637 - 27554575
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||    
T  27554637 cctccgatcactaatataagcaaaaatttacttttaaaatacattcaattaatgatgtatgtg 27554575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 46943944 - 46944006
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||| |||||    
T  46943944 cctccggtcactaatataaacaaaaatccactttttagatacattcaattaatgatgtatgtg 46944006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 24936673 - 24936600
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| ||||||||||  ||||||| |||||||||||| ||| ||||||||||| |||||||| |||||||    
T  24936673 cctccggttactaatataaataaaaattcactttttagatatattcaattaatgatgtatgtggtctttattat 24936600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 1706967 - 1706900
Alignment:
Q  248 gtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||| | |||||||||||||| | ||||||||| || ||||| |||||||    
T  1706967 gtcactaatataagcaaaaattcattttttagatacattcatttaatgatgtatatggtctttattat 1706900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 315
Target Start/End: Original strand, 27554503 - 27554570
Alignment:
Q  248 gtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||  ||||||||| |||||||||||||| ||||||||||| ||||| || |||||||    
T  27554503 gtcactaatataaataaaaatttattttttagatacattcaattaatgatgtatgtgatctttattat 27554570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 41872189 - 41872126
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||| ||| |||||||| |||| | ||||||||| ||||||||    
T  41872189 tccggtcactaatataagcaaaaatctacattttagattcattcatttaatgatgtatgtggtc 41872126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 46944075 - 46944016
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||| ||||    
T  46944075 tccggtcattaatataagtaaaaatttaatttttagatacattcaattaatgatgtatgt 46944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 34703443 - 34703505
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||| ||||||||||| |||||    
T  34703443 cctccggtcattaatataagcaaaaattcacaatttagatacattcaattaatgatgcatgtg 34703505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 40416906 - 40416968
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||| ||||||||||| |||||    
T  40416906 cctccggtcattaatataagcaaaaattcacaatttagatacattcaattaatgatgcatgtg 40416968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 16777892 - 16777953
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||| | ||||||| ||||    
T  16777892 cctccggtcactaatataagcaaaagtttaatttttagattcatttattaaatgatgtatgt 16777953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 26385749 - 26385692
Alignment:
Q  258 taagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||| ||| |||| |||||||||||||||| |||||||| |||||||    
T  26385749 taagcaaaaatttacatttaagattcatttaattaatgatgtatgtggtctttattat 26385692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 29498783 - 29498856
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| ||| ||||||||||||||||  || ||||||||| ||| ||||||||||| |||||||| |||||||    
T  29498783 cctccgatcaataatataagcaaaaatccacattttagatatattcaattaatgatgtatgtggtctttattat 29498856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 29498922 - 29498861
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||| ||||||||||||||||  | |||||||||||||||||||||| ||| |||||    
T  29498922 ctccggtcattaatataagcaaaaatccattttttagatacatttaattaattatgtatgtg 29498861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 237 - 305
Target Start/End: Original strand, 2456331 - 2456399
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtgg 305  Q
    |||| |||||| |||||| ||||||||||||| |||||||||| | |||| ||||||||||| ||||||    
T  2456331 tactccctccgatcactattataagcaaaaatctactttttaggttcattgaattaatgatgtatgtgg 2456399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 10422808 - 10422852
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||    
T  10422808 cctccggtcactaatataagcaaaaatttaatttttagattcatt 10422852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 10422948 - 10422904
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||    
T  10422948 cctccggtcactaatataagcaaaaatttaatttttagattcatt 10422904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 15051083 - 15051139
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||| ||| |||||||    
T  15051083 cctccggtcacaaatataagcaaaaatttatgttttagatacattcaataaatgatg 15051139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 31813413 - 31813476
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||| ||||| ||||||||||| |||||||| |||| ||||||||||| || |||||    
T  31813413 tccggtcactattataaacaaaaatttacattttagattcattcaattaatgatgtatatggtc 31813476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 315
Target Start/End: Original strand, 46648331 - 46648418
Alignment:
Q  228 taaatattgtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| |||||||  ||||| |||||||||||||||||||||||  ||||||||| |||| | | ||||||| |||| ||| |||||||    
T  46648331 taaaaattgtacatcctcctgtcactaatataagcaaaaatttgatttttagattcattcattaaatgatgtatgtagtctttattat 46648418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 21387702 - 21387652
Alignment:
Q  256 tataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||| |||||||||||||| |||||||| ||||||| |||||||    
T  21387702 tataagcaaaattttactttttagattcatttaataaatgatgtatgtggt 21387652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 21857063 - 21857113
Alignment:
Q  236 gtactacctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||| |||||    
T  21857063 gtactccctccggtcactattataagcaaaagtttactttttagacacatt 21857113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 38940215 - 38940285
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| |||||||||| || |||||||||||||| || |||||||| |||| ||| ||| ||||||||||||    
T  38940215 tactccctccggtcattattataagcaaaaattgacattttagattcattcaataaataatgaatgtggtc 38940285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 43813125 - 43813179
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatga 296  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||| ||| |||||    
T  43813125 cctccggtcactattataagcaaaaatttaatttttagattcattcaataaatga 43813179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 6455549 - 6455622
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| |||||| ||||||||||||||||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  6455549 cctccgatcactattataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattat 6455622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 6455689 - 6455624
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||| |||||||||||||||||||| ||| |||||| | |||| | ||||||||| ||||||||    
T  6455689 cctccgatcactaatataagcaaaaatctacattttaggttcattcatttaatgatgtatgtggtc 6455624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 10095719 - 10095784
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| |||||||||||||| || |||||||| |||| | | ||||||| ||||||||    
T  10095719 cctccggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtc 10095784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 21387576 - 21387649
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||||||||||||||||||||||  | ||| ||||| |||| ||||||||||| |||| ||| |||||||    
T  21387576 cctctggtcactaatataagcaaaaatccattttctagattcattcaattaatgatgtatgtagtctttattat 21387649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 23797488 - 23797415
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| |||||| |||| ||| | |||||||| |||| ||||||||||| || ||||| |||||||    
T  23797488 cctccggtcactattataagtaaaattttgcattttagattcattcaattaatgatgtatctggtctttattat 23797415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 26904917 - 26904856
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||| || || |||| ||| |||||| ||||||||| ||||||||    
T  26904917 cggtcactaatataagcaaaatttaacattttggattcatttatttaatgatgtatgtggtc 26904856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 34275191 - 34275256
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| ||||||||    
T  34275191 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtc 34275256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 34478373 - 34478300
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||| |||||||||||||| | ||||||||| |||||| | ||||||| || |||||  ||||||||    
T  34478373 tccggtcactattataagcaaaaattaattttttagattcatttactaaatgatgtatttggtctatattatga 34478300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 2297331 - 2297375
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||    
T  2297331 cctccggtcactaatataagcaaaaatttgatttttagattcatt 2297375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 2360449 - 2360493
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||    
T  2360449 cctccggtcactaatataagcaaaaatttgatttttagattcatt 2360493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 4407759 - 4407715
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||    
T  4407759 cctccggtcactaatataaacaaaaatccactttttagatacatt 4407715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 21886467 - 21886523
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||| || ||||||||||||||||  |||||||| |||| |||||||||||    
T  21886467 cctccggtcattattataagcaaaaatttatattttagattcattcaattaatgatg 21886523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 22281443 - 22281499
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||| |||||||||||| ||||||| || |||||||||| ||| |||||||||||    
T  22281443 cctccgatcactaatataaacaaaaatctaatttttagatatattcaattaatgatg 22281499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 26824906 - 26824950
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||    
T  26824906 cctccggtcactagtataagcaaaaatttaatttttagattcatt 26824950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 303
Target Start/End: Original strand, 37491278 - 37491334
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||||| ||||||||||||||||||||||||||  ||| ||| ||||||| ||||    
T  37491278 ggtcactattataagcaaaaatttactttttagatttattaaataaatgatgtatgt 37491334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 37491412 - 37491348
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| ||||||| ||||| ||||| |||||||||||||| |||||||| ||||||| || |||||    
T  37491412 ctccagtcactattataatcaaaagtttactttttagattcatttaataaatgatgtatatggtc 37491348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 303
Target Start/End: Complemental strand, 12171380 - 12171321
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||||||||||||||| ||||||||  ||||||||| |||||| | ||||||| ||||    
T  12171380 tccggtcactaatataagtaaaaatttgatttttagattcatttattaaatgatgtatgt 12171321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 22106800 - 22106745
Alignment:
Q  249 tcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||| ||||| || | |||||||||||||| ||||||||||| |||||    
T  22106800 tcactaatataaacaaaatttcattttttagatacattcaattaatgatgtatgtg 22106745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 24935892 - 24935947
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    ||||||||||||||||||||||||||| ||| |||||| | |||| | ||||||||    
T  24935892 cctccggtcactaatataagcaaaaatctacattttaggttcattcatttaatgat 24935947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 29779854 - 29779783
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatt 313  Q
    ||||| ||||| ||||||||||||||||||  |||||  | |||||||| ||||||| |||||||| |||||    
T  29779854 cctccagtcacaaatataagcaaaaatttatgttttatgttcatttaataaatgatgcatgtggtctttatt 29779783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 40529551 - 40529606
Alignment:
Q  249 tcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||| ||||| || | |||||||||||||| ||||||||||| |||||    
T  40529551 tcactaatataaacaaaatttcattttttagatacattcaattaatgatgtatgtg 40529606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 286
Target Start/End: Original strand, 43250374 - 43250413
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  43250374 ggtcactattataagcaaaactttactttttagatacatt 43250413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 45000602 - 45000657
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||| ||| |||||||||||||| || ||| |||||||||| |||||||||||    
T  45000602 ctccggtaacttatataagcaaaaatctattttctagatacattcaattaatgatg 45000657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 46658859 - 46658797
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| ||||| ||| ||||||||    
T  46658859 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtgttccatattatga 46658797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 2360589 - 2360543
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacattta 288  Q
    |||||||||||||||||||| ||||||||  ||||||||| ||||||    
T  2360589 cctccggtcactaatataaggaaaaatttgatttttagattcattta 2360543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 25486843 - 25486782
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatg 316  Q
    ||||||||||||| |||||||||||| | |||| | ||||||||| ||||||||| |||||||    
T  25486843 aatataagcaaaa-tttactttttaggttcattcatttaatgatgtatgtggtccatattatg 25486782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 34840609 - 34840675
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||| |||||||||| || ||||||||||| || ||||||||||| |||| ||| ||||||| ||||    
T  34840609 tactccctccggtcattattataagcaaaagttcactttttagattcattcaataaatgatgtatgt 34840675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 286
Target Start/End: Complemental strand, 43250473 - 43250435
Alignment:
Q  248 gtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  43250473 gtcactattataagcaaaactttactttttagatacatt 43250435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 46648767 - 46648721
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacattta 288  Q
    ||||||||||||||||||||||||| |||  ||||||||| ||||||    
T  46648767 cctccggtcactaatataagcaaaattttgatttttagattcattta 46648721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 716241 - 716290
Alignment:
Q  250 cactaatataagcaaaaatttactttt-tagatacatttaattaatgatg 298  Q
    |||||||||||| ||||||||| |||| |||||||||| |||||||||||    
T  716241 cactaatataagtaaaaatttatttttttagatacattcaattaatgatg 716290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 4406079 - 4406144
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||||||||||| |||||  ||| |||||| | |||| | ||||||||| ||||||||    
T  4406079 cctccggtcactaatataagaaaaaaactacattttaggttcattcatttaatgatgtatgtggtc 4406144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 7345025 - 7344965
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||| | |||| ||||||||||| ||||||||| ||||||    
T  7345025 aatataagcaaat-tttactttttagtttcattcaattaatgatgtatgtggtccatattat 7344965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 8169244 - 8169175
Alignment:
Q  234 ttgtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||| | |||||| |||| ||||||||||| || ||||||||||| |||| ||| ||||||| ||||    
T  8169244 ttgtacttcatccggttactattataagcaaaagttaactttttagattcattcaataaatgatgtatgt 8169175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 8571522 - 8571461
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||||||||||||||||||||||||||  |||||| || |||| | | ||||||| ||||    
T  8571522 cctccggtcactaatataagcaaaaatttgatttttaaattcattcattaaatgatgtatgt 8571461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 8595147 - 8595208
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||| |||||||| ||||||||| ||||||||| |||| | | ||||||| ||||    
T  8595147 cctccggtcacaaatataagaaaaaatttattttttagattcattcattaaatgatgtatgt 8595208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 10414939 - 10415012
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| |  ||||| |||||||    
T  10414939 cctccggtcactaatataagcaaaaaactacattttaggttcattgatttaatgatgcacatggtctttattat 10415012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 12274949 - 12274884
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||| |||| ||||||||||||| |||||||||||| |||| |||  || ||| ||||||||    
T  12274949 cctccggtaactattataagcaaaaatgtactttttagattcattcaatatataatgtatgtggtc 12274884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 19531966 - 19532026
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||| | |||| ||||||||||| ||||||||| ||||||    
T  19531966 aatataagcaaat-tttactttttaggttcattcaattaatgatgtatgtggtccatattat 19532026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 25245283 - 25245218
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| |||||||||||||  || |||||||| |||| | | ||||||| ||||||||    
T  25245283 cctccggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtc 25245218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 26982759 - 26982808
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||| ||| ||||||||| ||||||||||| || ||||||||||||||||    
T  26982759 tacttccttcggtcactattataagcaaaacttcactttttagatacatt 26982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 28949415 - 28949350
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| || ||| | |||| | ||||||||| ||||||||    
T  28949415 cctccggtcactaatataagcaaaaaactacattctaggttcattcatttaatgatgtatgtggtc 28949350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 46221205 - 46221145
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||| ||||||| | |||||||||||||||| ||||||||| ||||||    
T  46221205 aatataagcaaat-tttattttttaggttcatttaattaatgatgtatgtggtccatattat 46221145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 3498307 - 3498358
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| |||||||    
T  3498307 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggt 3498358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 3967842 - 3967782
Alignment:
Q  245 ccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtgg 305  Q
    |||||||||| ||||||||||||  |||||||||| | |||| ||| ||||||| ||||||    
T  3967842 ccggtcactattataagcaaaaaactactttttaggttcattgaataaatgatgtatgtgg 3967782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 8571382 - 8571426
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||||||||||||||| |||  ||||||||| ||||    
T  8571382 cctccggtcactaatataagcaaaagtttgatttttagattcatt 8571426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 270
Target Start/End: Complemental strand, 8595287 - 8595259
Alignment:
Q  242 cctccggtcactaatataagcaaaaattt 270  Q
    |||||||||||||||||||||||||||||    
T  8595287 cctccggtcactaatataagcaaaaattt 8595259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 12171242 - 12171286
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||| ||||||||||||||||||  ||||||||| ||||    
T  12171242 cctccggtcattaatataagcaaaaatttgatttttagattcatt 12171286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 28228988 - 28229052
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    |||||| |||||| ||||||||||| || || |||||| | |||||||| ||||||| |||||||    
T  28228988 cctccgatcactattataagcaaaatttaacattttagcttcatttaataaatgatgcatgtggt 28229052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 31417655 - 31417595
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||| |||||||||||||||| |  |||||||| |||| ||| ||||||| |||||    
T  31417655 tccggtcacaaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgtg 31417595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 43067037 - 43067088
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||| |||||||||||| | |||| ||||||||||| |||||||    
T  43067037 aatataagcaaaa-tttactttttaggttcattcaattaatgatgtatgtggt 43067088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 43103072 - 43103128
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||| |||||||||||||| || ||||| || |||||| | |||||||    
T  43103072 cctccggtcactattataagcaaaaattaacattttaaattcatttattaaatgatg 43103128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 5418655 - 5418582
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  5418655 cctccgatcactaatataagcaaaaatttactttttagatacattgaattaatgatgtatgtggtctttattat 5418582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 24941116 - 24941184
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||||||    
T  24941116 ggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattat 24941184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 5281275 - 5281202
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||||| || |||||||    
T  5281275 cctccggtcactaatataagtaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattat 5281202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 52817707 - 52817634
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||| || |||||||    
T  52817707 cctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctttattat 52817634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 55087851 - 55087778
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||| |||| |||||||    
T  55087851 cctccggtcactaatataagcaaaaatctaatttttagatacattcaattaatgatgtatgcggtctttattat 55087778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 13689538 - 13689598
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||||    
T  13689538 tccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtg 13689598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 13689675 - 13689603
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||| |||| ||| |||||||    
T  13689675 ctccggtcactaatataagcaaaaattcactttttagattcattcaattaataatgtatgttgtctttattat 13689603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 44156140 - 44156084
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  44156140 cctcctgtcactaatataagcaaaaattcactttttagatacattgaattaatgatg 44156084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 16468204 - 16468269
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||||||||||||||||| |||| |||||| | |||||| ||||||||| ||||||||    
T  16468204 cctccggtcactaatataagcaaaaaattacattttaggttcatttatttaatgatgtatgtggtc 16468269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 54164953 - 54164887
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtcc 308  Q
    ||||||||||||| ||||||||||||| || ||||||||| |||| ||| ||||||| |||||||||    
T  54164953 cctccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtcc 54164887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 13743871 - 13743931
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  13743871 aatataagcaaat-tttactttttagattcatttaattaatgatgtatgtggtccatattat 13743931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 24941251 - 24941195
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||||| |||| |||||||||| || ||||||||||||| |||||||||||    
T  24941251 cctccggtcactgatatgagcaaaaattcaccttttagatacattcaattaatgatg 24941195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 38381976 - 38382040
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||| | | ||||||| |||||||    
T  38381976 cctccggtcactattataagcaaaaatttacattttagattcattgattaaatgatgtatgtggt 38382040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 54713098 - 54713154
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||| | |||||||||    
T  54713098 cctccggtcactattataagcaaaaatttacattttagattcattcatttaatgatg 54713154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 3511711 - 3511782
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| |||||||||||||||||| ||||| |||||||| |||| ||||||||||| || || || |||||||    
T  3511711 tccgatcactaatataagcaaaactttacattttagattcattcaattaatgatgtatatgatctttattat 3511782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 10031506 - 10031552
Alignment:
Q  251 actaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  10031506 actaatataag-aaaaatttactttttagatacattcaattaatgatg 10031552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 26206721 - 26206659
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||  |||||||||||| | |||||||||||||||| ||||||||| ||||||||    
T  26206721 aatataagcaaat-tttactttttaggttcatttaattaatgatgtatgtggtccatattatga 26206659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 34709588 - 34709650
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||| ||||||||| ||||||||    
T  34709588 aatataagcaaaa-tttactttttagattcattcatttaatgatgtatgtggtccatattatga 34709650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 5418519 - 5418577
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||| |||||||||  | |||||||||||||| ||||||||||| |||||    
T  5418519 cggtcactaatatgagcaaaaatcaattttttagatacattcaattaatgatgtatgtg 5418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 19934778 - 19934712
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtcc 308  Q
    |||||| |||||| ||||||||||||| || ||||||||| |||| ||| ||||||| |||||||||    
T  19934778 cctccgatcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtcc 19934712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 52817567 - 52817629
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||| | |||| |||| |||||    
T  52817567 cctccggtcactgatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtg 52817629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 3740448 - 3740387
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||||||||||||||||| || ||||||||| | |||| ||| ||||||| ||||    
T  3740448 cctccggtcactaatataagcaaaagttgactttttaggttcattcaataaatgatgcatgt 3740387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 12596678 - 12596739
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtgg 305  Q
    ||||||||| |||||||||||||||||| |||||| || |||||||| ||| ||| ||||||    
T  12596678 tccggtcacaaatataagcaaaaatttattttttaaattcatttaataaataatgtatgtgg 12596739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 19934638 - 19934703
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| ||||||||||| |  ||||||||||| |||| ||| ||||||| ||||||||    
T  19934638 cctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtc 19934703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 20215567 - 20215632
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| |||||||||||||| || |||||| | |||| ||| ||||||| ||||||||    
T  20215567 cctccggtcactattataagcaaaaattgacattttaggttcattcaataaatgatgtatgtggtc 20215632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 20294571 - 20294506
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||| |||||||||||||||||||| |||||| | |||| | ||||||||| || |||||    
T  20294571 cctccggtcattaatataagcaaaaatttacattttaggttcattcatttaatgatgtatatggtc 20294506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 28702061 - 28702134
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||| |||  ||||||||| |||| | | ||||||| |||| ||| |||||||    
T  28702061 cctccggtcactaatataagcaaaagtttgatttttagattcattcattaaatgatgtatgtagtctttattat 28702134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 31933642 - 31933703
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||| ||||||||||||| ||||||||||  | |||||||||||| |||||||| |||||||    
T  31933642 tactccctccggtcactattataagcaaatttctactttttagattcatttaataaatgatg 31933703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 36072570 - 36072643
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||| | |||||||| |||| |||| |||||| || ||||| |||||||    
T  36072570 cctccggtcactattataagcaaaattttgcattttagattcattcaatttatgatgtatatggtctttattat 36072643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 49481880 - 49481953
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  49481880 cctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattat 49481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 49482020 - 49481955
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| || ||| |||||| | ||||||||| ||||||||    
T  49482020 cctccggtcactaatataagcaaaaaactacattctaggtacattcatttaatgatgtatgtggtc 49481955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 54164813 - 54164878
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| ||||||||||| |  ||||||||||| |||| ||| ||||||| ||||||||    
T  54164813 cctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtc 54164878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 56328590 - 56328517
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||  ||| |||||||| |||| | ||||||||| || | ||| |||||||    
T  56328590 cctccggtcactaatataagcaaaaaactacattttagattcattcatttaatgatgcatatagtctttattat 56328517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 19878147 - 19878191
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||||||||||||||||||||||||||| || |||||||| ||||    
T  19878147 cctccggtcactaatataagcaaaaattaacattttagattcatt 19878191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 29006837 - 29006897
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||| ||||||||||||| || ||||||||| |||| ||| ||||||| |||||    
T  29006837 tccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtg 29006897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32294764 - 32294819
Alignment:
Q  1 taatgtgagtatgagagagaaagtgtta--aaagttatacaaatatcatttctcta 54  Q
    ||||||||||||||||||||| ||  ||  ||||||||||||||||||||||||||    
T  32294764 taatgtgagtatgagagagaaggttgtacaaaagttatacaaatatcatttctcta 32294819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 54106612 - 54106544
Alignment:
Q  245 ccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatt 313  Q
    |||||||| ||||||||||||||||||  |||||||| |||| ||| ||||||| ||||| || |||||    
T  54106612 ccggtcacaaatataagcaaaaatttatgttttagattcattcaataaatgatgtatgtgatctttatt 54106544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 2440912 - 2440975
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| ||||||||||||||||||| |||  |||||| | |||||| ||||||||| ||||||||    
T  2440912 tccgatcactaatataagcaaaaaattatattttaggttcatttatttaatgatgtatgtggtc 2440975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 4406367 - 4406308
Alignment:
Q  256 tataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||  |||| ||| |||| ||||||||||| |||||||| |||||||    
T  4406367 tataagcaaaaatttatattttggattcattcaattaatgatgtatgtggtctttattat 4406308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 298
Target Start/End: Complemental strand, 6243756 - 6243709
Alignment:
Q  251 actaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||| ||||||||| | |||||||||||| |||||||||||    
T  6243756 actaatataagaaaaaatttattatttagatacattcaattaatgatg 6243709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 21142216 - 21142157
Alignment:
Q  256 tataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||| ||||  |||||||| |||||||||||||||| || ||||| |||||||    
T  21142216 tataagcaaaagtttatattttagattcatttaattaatgatgtatatggtctttattat 21142157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 21859484 - 21859555
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||| |||||||||  ||||||||| |||| | | ||||||| |||| ||| |||||||    
T  21859484 tccggtcactaatataaacaaaaatttgatttttagattcattcattaaatgatgtatgtagtctttattat 21859555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 21915347 - 21915418
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||| |||||||||  ||||||||| |||| | | ||||||| |||| ||| |||||||    
T  21915347 tccggtcactaatataaacaaaaatttgatttttagattcattcattaaatgatgtatgtagtctttattat 21915418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 36235805 - 36235743
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||| |||||||||||| | |||| | ||||||||| ||||||||| ||||||||    
T  36235805 aatataagcaaaa-tttactttttaggttcattcatttaatgatgtatgtggtccatattatga 36235743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 43635849 - 43635911
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||| |||| |||||||||||||| |||| ||||||||||| ||||||| | ||||||||    
T  43635849 aatataag-aaaattttactttttagattcattcaattaatgatgtatgtggttcatattatga 43635911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 4044439 - 4044373
Alignment:
Q  241 acctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||||||||||||||||||  ||| |||||  | |||| | ||||||||| ||||||||    
T  4044439 acctccggtcactaatataagcaaaaaactacattttatgttcattcatttaatgatgtatgtggtc 4044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 4386318 - 4386388
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| ||||| ||||||| ||||||||||| || |||||||||||  ||||| | ||||||| ||||||||    
T  4386318 tactccctccagtcactattataagcaaaagttgactttttagattaatttattaaatgatgtatgtggtc 4386388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 6243643 - 6243677
Alignment:
Q  260 agcaaaaatttactttttagatacatttaattaat 294  Q
    |||||||||||| ||||||||||||||||||||||    
T  6243643 agcaaaaatttattttttagatacatttaattaat 6243677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 10031661 - 10031599
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||| |||||||||| |||||||   ||||||||||| ||||||||||| ||| |||||    
T  10031661 cctccggttactaatataaacaaaaatccgctttttagatatatttaattaataatgtatgtg 10031599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 298
Target Start/End: Original strand, 20598259 - 20598313
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||    
T  20598259 tccggtcacaaatataagcaaaaattcatgttttagatacattcaataaatgatg 20598313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 20814674 - 20814604
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| ||||||||||||| ||||| ||||  | |||||||||||| |||| ||| ||||||| ||||||||    
T  20814674 tacttcctccggtcactattataaacaaatttctactttttagattcattcaataaatgatgcatgtggtc 20814604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 22720652 - 22720602
Alignment:
Q  236 gtactacctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  22720652 gtactccctccggtcactattataagcaaaactccactttttagatacatt 22720602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 29223943 - 29223997
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    ||||||| ||||||||||||||||||  | |||||||||| ||| ||||||||||    
T  29223943 ctccggttactaatataagcaaaaatccattttttagatatattcaattaatgat 29223997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 31933792 - 31933722
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| |||| |||||||| ||||||||||  | |||||||||||| |||||||| || |||| ||||||||    
T  31933792 tactccctctggtcactactataagcaaatctctactttttagattcatttaataaacgatgtatgtggtc 31933722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 2198043 - 2198092
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  2198043 tactccctccggtcactattataagcaaaactccactttttagatacatt 2198092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 3504084 - 3504133
Alignment:
Q  249 tcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||||| |||||||| | ||||||||| |||| |||||||||||    
T  3504084 tcactaatataaacaaaaattcattttttagattcattcaattaatgatg 3504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 14450957 - 14451030
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| |||||| ||||||||||||| ||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  14450957 cctccgatcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattat 14451030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 14451096 - 14451035
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||| ||||||||||||||||||||||||| |||||| | ||||   ||||||||| |||||    
T  14451096 ctcctgtcactaatataagcaaaaatttacattttaggttcattcgtttaatgatgtatgtg 14451035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 18328052 - 18327999
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||| ||||| |||| | ||||||||| ||||||||| ||||||||    
T  18328052 aaaatttactttctagattcattcatttaatgatgtatgtggtccatattatga 18327999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 18437347 - 18437400
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||| ||||| |||| | ||||||||| ||||||||| ||||||||    
T  18437347 aaaatttactttctagattcattcatttaatgatgtatgtggtccatattatga 18437400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 19754241 - 19754290
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||| |||| ||||||||||  ||||||||| ||||||||    
T  19754241 tttactttttagattcattcaattaatgatatatgtggtccatattatga 19754290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 19785565 - 19785516
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||| |||| ||||||||||  ||||||||| ||||||||    
T  19785565 tttactttttagattcattcaattaatgatatatgtggtccatattatga 19785516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 29006975 - 29006910
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| ||||||||||| |  |||||||| || |||| ||| ||||||| ||||||||    
T  29006975 cctccggtcactattataagcaaaattccactttttaaattcattcaataaatgatgtatgtggtc 29006910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 31914446 - 31914393
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||| ||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  31914446 aaaattgactttttagattcatttatttaatgatgtatgtggtacatattatga 31914393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 49745590 - 49745530
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||| ||||||| | |||||||||||||||| ||||||||| ||||||    
T  49745590 aatataagcaaat-tttattttttaggtccatttaattaatgatgtatgtggtccatattat 49745530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 52673593 - 52673638
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagata 282  Q
    |||| ||||| ||||||| ||||||||||| |||||||||||||||    
T  52673593 tactccctcccgtcactattataagcaaaactttactttttagata 52673638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 5289728 - 5289768
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtcc 308  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  5289728 tttactttttagattcattcaattaatgatgtatgtggtcc 5289768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 22020111 - 22020171
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    |||| |||| |||||||| ||||||||||| || ||||||||||| |||| ||| ||||||    
T  22020111 tactccctctggtcactattataagcaaaagttcactttttagattcattcaataaatgat 22020171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 25856023 - 25856074
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||  |||||||||||||| |||||||| ||||||| |||||||    
T  25856023 aatataagcaaat-tttactttttagattcatttaatcaatgatgtatgtggt 25856074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 33520652 - 33520616
Alignment:
Q  271 actttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  33520652 actttttagattcatttaattaatgatgtatgtggtc 33520616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 34166125 - 34166184
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatta 314  Q
    ||||||||||||| || ||||||||| | |||| ||||||||||| ||||||||| |||||    
T  34166125 aatataagcaaaa-ttgactttttaggttcattcaattaatgatgtatgtggtccatatta 34166184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 46779421 - 46779370
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||  |||| ||||||||| |||||||||||||||| |||||||    
T  46779421 aatataagcaaat-tttattttttagattcatttaattaatgatgtatgtggt 46779370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 50038463 - 50038514
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| |||||||    
T  50038463 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggt 50038514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 50045685 - 50045736
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||| |||||||    
T  50045685 aatataagcaaat-tttactttttagattcattcaattaatgatgtatgtggt 50045736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 52673734 - 52673694
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||| ||||||||||| || ||||||||||||||||    
T  52673734 cggtcactattataagcaaaatttcactttttagatacatt 52673694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 54106476 - 54106536
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||||||| |||||||||||||||| |  |||||||| |||| ||| ||||||| ||||    
T  54106476 ctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgt 54106536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 54532888 - 54532844
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaatt 291  Q
    |||||||| ||||||||||||||||| ||||| || |||||||||    
T  54532888 ggtcactattataagcaaaaatttacattttaaattcatttaatt 54532844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 5574250 - 5574177
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||||||    
T  5574250 cctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtggtctttattat 5574177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 30902407 - 30902340
Alignment:
Q  248 gtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  30902407 gtcactaatataagcaaaaatttactttttagatacattcaattaatgatatatgtggtctttattat 30902340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 38594344 - 38594417
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| || |||||||  ||||||||||||||||    
T  38594344 cctccggtcactaatataagcaaaaatctactctttagatacattcaactaatgatatatgtggtccttattat 38594417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 38597940 - 38598013
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| || |||||||  ||||||||||||||||    
T  38597940 cctccggtcactaatataagcaaaaatctactctttagatacattcaactaatgatatatgtggtccttattat 38598013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 248 - 315
Target Start/End: Original strand, 34248421 - 34248488
Alignment:
Q  248 gtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| ||| |||||||    
T  34248421 gtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgttgtctttattat 34248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 25278178 - 25278236
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  25278178 cggtcattaatataagcaaaaatttaccttttagatacatttaattaatgatgtatgtg 25278236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 38594484 - 38594422
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||||    
T  38594484 cctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtg 38594422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 38598080 - 38598018
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||||    
T  38598080 cctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtg 38598018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 43426768 - 43426713
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  43426768 cctccggtcattaatataagcaaaaatttattttttagatacattcaattaatgat 43426713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 3887973 - 3887911
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||   ||||||||||||||| ||||||||||| |||||    
T  3887973 cctccggtcactaatataagcaaaaatcatctttttagatacattcaattaatgatgtatgtg 3887911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 43426632 - 43426701
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||| ||||||  |||||||| ||||||| ||||||||||| |||||||| |||||||    
T  43426632 cggtcactaatataagtaaaaatccactttttaaatacattcaattaatgatgtatgtggtctttattat 43426701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 20504243 - 20504299
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||    
T  20504243 cctccggtcactaatataaacaaaaatctactttttagatatattcaattaatgatg 20504299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 34248555 - 34248499
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||| ||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  34248555 cctctggtcactaatataagcaaaaatccactttttagatacattcaattaatgatg 34248499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 44274688 - 44274620
Alignment:
Q  235 tgtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||| |||| ||| ||||||| ||||    
T  44274688 tgtactccctccggtcactgatataagcaaaaattcactttttagattcattcaataaatgatgtatgt 44274620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 5574110 - 5574165
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    |||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||    
T  5574110 cctccggtcactaatataagcaaaaattcacttttaaaatacattcaattaatgat 5574165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 1981120 - 1981062
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||| |  |||||||||||||| ||||||||||| |||||    
T  1981120 cggtcactaatataagcaaaaatctcatttttagatacattcaattaatgatgtatgtg 1981062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 315
Target Start/End: Original strand, 3887840 - 3887906
Alignment:
Q  249 tcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||||  |||| ||| |||||||    
T  3887840 tcactaatataagcaaaaatctattttttagatacattcaattaatgatttatgtagtctttattat 3887906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 1961309 - 1961382
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| |||||| ||||||||||||||||| ||||||||   |||||||||||||| || ||||| |||||||    
T  1961309 cctccgatcactattataagcaaaaatttacattttagatttgtttaattaatgatgtatatggtctttattat 1961382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 24457100 - 24457165
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||||||||||||||||| |||| |||||| | |||| | ||||||||| ||||||||    
T  24457100 cctccggtcactaatataagcaaaaaattacattttaggttcattcatttaatgatgtatgtggtc 24457165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 27331899 - 27331826
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| |||||||||||||  || |||||||| |||| ||||||||||| |||| ||| |||||||    
T  27331899 cctccggtcactattataagcaaaaatcaacattttagattcattcaattaatgatgtatgtagtctttattat 27331826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 30902274 - 30902335
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||| ||||||||||||||||||| | |||||| ||||||| ||||||||||| |||||    
T  30902274 ctccggttactaatataagcaaaaattcattttttaaatacattcaattaatgatgtatgtg 30902335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 6567055 - 6566999
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||||||||||||||||||||  ||| |||||||| ||| |||||||||||    
T  6567055 cctccggtcactaatataagcaaaaatccactatttagatatattcaattaatgatg 6566999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 8554683 - 8554746
Alignment:
Q  253 taatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||  |||||||||||||| |||||||||||||||  ||||||||| ||||||||    
T  8554683 taatataagcaaat-tttactttttagattcatttaattaatgatatatgtggtccatattatga 8554746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 22373610 - 22373666
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||||||||||| || |||||| ||| ||| |||||||||||    
T  22373610 cctccggtcactaatataagcaaaaatatattttttaaatatattcaattaatgatg 22373666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 22373749 - 22373677
Alignment:
Q  244 tccggtcactaatataagcaaaaatttacttttt-agatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| |||||||||||||||||||| || ||||| ||||||||| | ||||||||| |||||||| |||||||    
T  22373749 tccgctcactaatataagcaaaaatctaattttttagatacattcagttaatgatgtatgtggtctttattat 22373677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 5094967 - 5094905
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||| ||||||||| ||||||||    
T  5094967 aatataagcaaaa-tttactttttagattcattcatttaatgatgtatgtggtccatattatga 5094905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 21488166 - 21488103
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||| ||||||||||||||| |||| |||||||| |||| | ||||||||| |||||||    
T  21488166 ctccggtcattaatataagcaaaaaattacattttagattcattcatttaatgatgtatgtggt 21488103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 316
Target Start/End: Complemental strand, 38465929 - 38465855
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatg 316  Q
    ||||| ||||||| | ||||||||||| ||| |||||||| |||| ||||||||||| || ||||| ||||||||    
T  38465929 cctccagtcactattgtaagcaaaaatctacattttagattcattcaattaatgatgtatatggtctttattatg 38465855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 38618238 - 38618176
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||| ||||||||| |||||| || || ||||||||||| ||||||||||| |||||    
T  38618238 cctccggtcattaatataagtaaaaatctatttgttagatacattcaattaatgatgtatgtg 38618176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 42530494 - 42530544
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaat 294  Q
    ||||||||||| |||||| |||||||||| |||||||| ||||||||||||    
T  42530494 tccggtcactattataagtaaaaatttacattttagattcatttaattaat 42530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 9431197 - 9431262
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||||||||||||||| ||||| |||| |||||| | |||| | ||||||||| ||||||||    
T  9431197 cctccggtcactaatataagtaaaaaattacattttaggttcattcatttaatgatgtatgtggtc 9431262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 26234164 - 26234091
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  26234164 cctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattat 26234091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 37195052 - 37195125
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||| || |  |||||||| || | ||||||||||| || ||||| |||||||    
T  37195052 cctccggtcactaatataagcaaaagttaatattttagattcactcaattaatgatgtatatggtctttattat 37195125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 41824400 - 41824335
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| |||||| ||||||| ||||||||| | |||| ||| ||||||| ||||||||    
T  41824400 cctccggtcactactataagtaaaaattgactttttaggttcattcaataaatgatgtatgtggtc 41824335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 6566919 - 6566967
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaat 294  Q
    ||||||||||||| |||||||| | |||||||||||| |||||||||||    
T  6566919 cggtcactaatatgagcaaaaaatcactttttagatatatttaattaat 6566967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 19612941 - 19612997
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||||||||||||||||| ||  |||||||| |||| | |||||||||    
T  19612941 cctccggtcactaatataagcaaaaatctatattttagattcattcatttaatgatg 19612997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 32143406 - 32143470
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||| ||||||||||| ||||| ||||| || |||||| | ||||||| |||||||    
T  32143406 cctccggtcactattataagcaaaactttacattttaaattcatttattaaatgatgtatgtggt 32143470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 43732152 - 43732208
Alignment:
Q  256 tataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttat 312  Q
    ||||||||||||| ||| |||||||| |||| |||||||||||||| ||||| ||||    
T  43732152 tataagcaaaaatatacattttagattcattcaattaatgatgaatatggtcattat 43732208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 1980985 - 1981040
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    ||||||||||||||||||||||||| |  || ||||| ||||||| ||||||||||    
T  1980985 cctccggtcactaatataagcaaaattccacattttaaatacattcaattaatgat 1981040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 3121562 - 3121511
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaa 293  Q
    ||||||||||||| ||||||||||||| ||| |||||||| |||| ||||||    
T  3121562 cctccggtcactattataagcaaaaatctacattttagatccattcaattaa 3121511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 5144382 - 5144335
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||| | |||||||||||||||| ||||||||| ||||||    
T  5144382 tttactttttaggttcatttaattaatgatgtatgtggtccatattat 5144335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 5204905 - 5204967
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||||  |||||||||||| | |||||||||||||||| ||||||||| || |||||    
T  5204905 aatataagcaaat-tttactttttaggttcatttaattaatgatgtatgtggtccataatatga 5204967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 7837092 - 7837147
Alignment:
Q  249 tcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||| ||||||| |  |||||||||||||| |||||||||| ||||||    
T  7837092 tcactaatataaacaaaaatctcatttttagatacattcaattaatgataaatgtg 7837147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 26003561 - 26003502
Alignment:
Q  256 tataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||| |||||||| |||| ||||||||||| || ||||| |||||||    
T  26003561 tataagcaaaaatctacattttagattcattcaattaatgatgtatatggtctttattat 26003502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 45035923 - 45035852
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttatt 313  Q
    ||||||||||| ||||||||||||||| ||  |||||||| || | ||| ||||||| |||||||| |||||    
T  45035923 cctccggtcacaaatataagcaaaaatatatgttttagattcactcaataaatgatgtatgtggtctttatt 45035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 10495782 - 10495740
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||| ||||||||||| || ||||||||||||||||    
T  10495782 tccggtcactattataagcaaaatttcactttttagatacatt 10495740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 11342108 - 11342054
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||| |||||| ||||||||||||| ||  |||||||| ||||||||||||||||    
T  11342108 tccgatcactattataagcaaaaatctatattttagattcatttaattaatgatg 11342054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 24971218 - 24971279
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatg 316  Q
    ||||||||||||  |||||||||||||| |||| || |||||||| ||||||||| |||||||    
T  24971218 aatataagcaaat-tttactttttagattcattcaactaatgatgtatgtggtccatattatg 24971279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 27964279 - 27964349
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| ||||||||||||  |||||||||||||| ||||||||| | |||| ||| ||| ||| ||||||||    
T  27964279 tactccctccggtcacttttataagcaaaaattgactttttaggttcattcaataaattatgtatgtggtc 27964349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 34438872 - 34438811
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattatg 316  Q
    ||||||||||||| || ||||||||||| |||| |||||||| |||||||||| | |||||||    
T  34438872 aatataagcaaaa-ttaactttttagattcattgaattaatgttgaatgtggttcatattatg 34438811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 3124043 - 3123982
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||| |||||||||||||||| |  |||||||| |||| ||| ||||||| ||||    
T  3124043 cctccggtcacaaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgt 3123982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 8383324 - 8383263
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||| | |||||||||||||||  ||| |||||||| |||||| ||||||||| |||||    
T  8383324 ctccggttattaatataagcaaaaaactacattttagattcatttatttaatgatgtatgtg 8383263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 8996906 - 8996849
Alignment:
Q  229 aaatattgtactacctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||| ||||  |||||||||||| ||||||||||| | |||||| ||||||||||    
T  8996906 aaatattatactctctccggtcactattataagcaaaactctactttctagatacatt 8996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 15119781 - 15119842
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||| |||||||||||||| || |||||||| |||| | | ||||||| ||||||||    
T  15119781 cggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtc 15119842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 15119917 - 15119844
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||||| ||| ||||||||  ||| | ||||||||| || | ||| |||||||    
T  15119917 cctccggtcactattataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattat 15119844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 19950117 - 19950190
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||||||||||||||  ||  |||||| | |||||| ||||||||| |  ||||| |||||||    
T  19950117 cctccggtcactaatataagcaaaaaactatattttaggttcatttatttaatgatgcacatggtctttattat 19950190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 29771744 - 29771793
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||| |||| ||||||||||| ||||| ||| ||||||||    
T  29771744 tttactttttagattcattcaattaatgatgtatgtgatccatattatga 29771793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 29819770 - 29819835
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||| ||||||  ||| |||||  | |||||| ||||||||| ||||||||    
T  29819770 cctccggtcactaatataaacaaaaaactacattttaagttcatttatttaatgatgtatgtggtc 29819835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 40340596 - 40340536
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||  |||||||||||| | |||| ||||||||||| ||||||||| ||||||    
T  40340596 aatataagcaaat-tttactttttaggttcattcaattaatgatgtatgtggtccatattat 40340536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 41805274 - 41805347
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||| | ||||| || |||| ||||||||||| || | ||| |||||||    
T  41805274 cctccggtcactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatagtctttattat 41805347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 42579045 - 42579094
Alignment:
Q  268 tttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    ||||||||||| || |||||||||||||||| |||| |||| ||||||||    
T  42579045 tttactttttaaattcatttaattaatgatgtatgtagtccatattatga 42579094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 43100744 - 43100793
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    |||| ||| ||||||||| |||||||||||||| | ||||||||||||||    
T  43100744 tactcccttcggtcactattataagcaaaaattcattttttagatacatt 43100793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 3098266 - 3098222
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||| ||||||||||||| ||| |||||||| ||||    
T  3098266 cctccggtcactattataagcaaaaatctacattttagattcatt 3098222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 7079505 - 7079445
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||| ||||||||||||  ||  |||||||| |||||||||||||||| || |||||    
T  7079505 ggtcactattataagcaaaaacatatattttagattcatttaattaatgatgtatatggtc 7079445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 10041555 - 10041606
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    |||||||| |||| ||||| |||||||| |||||||||||||||| |||||||    
T  10041555 aatataag-aaaattttacattttagattcatttaattaatgatgtatgtggt 10041606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 19210823 - 19210867
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaatt 291  Q
    |||||||| ||||||||||||||||| ||||| || |||||||||    
T  19210823 ggtcactattataagcaaaaatttacattttaaattcatttaatt 19210867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 19950257 - 19950193
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    |||||||||||||||||||||||| |  ||  |||||| | |||||| ||||||||| |||||||    
T  19950257 cctccggtcactaatataagcaaacaactatattttaggttcatttatttaatgatgtatgtggt 19950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 23143474 - 23143542
Alignment:
Q  230 aatattgtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||| |||| ||| ||||||||| |||||||||||||  ||||||||| | || ||||| |||||||    
T  23143474 aatattatactcccttcggtcactattataagcaaaaatcaactttttaggttcacttaataaatgatg 23143542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 23555264 - 23555332
Alignment:
Q  230 aatattgtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||| |||| ||| ||||||||| |||||||||||||  ||||||||| | || ||||| |||||||    
T  23555264 aatattatactcccttcggtcactattataagcaaaaatcaactttttaggttcacttaataaatgatg 23555332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24361558 - 24361503
Alignment:
Q  1 taatgtgagtatgagagagaaagtgtt--aaaagttatacaaatatcatttctcta 54  Q
    |||||||||||||||| |||||||  |  ||||||| |||||||||||||||||||    
T  24361558 taatgtgagtatgagatagaaagttgtcaaaaagttgtacaaatatcatttctcta 24361503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 25270996 - 25270952
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatt 286  Q
    ||||||||||||| ||||||||||||| ||| |||||||| ||||    
T  25270996 cctccggtcactattataagcaaaaatctacattttagattcatt 25270952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 25668538 - 25668487
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||  |||||||||||| | |||||||||||||||| |||||||    
T  25668538 aatataagcaaat-tttactttttaggttcatttaattaatgatgtatgtggt 25668487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 44587778 - 44587718
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||||| ||||||||||||  |||||||||||| |||| ||| | ||||| ||||||||    
T  44587778 ggtcactattataagcaaaaaactactttttagattcattgaatgagtgatgtatgtggtc 44587718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 120285 - 120223
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  120285 cctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtg 120223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 120145 - 120209
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||    
T  120145 cctccggtcactaatataagcaaaatttcactttttagatacattcaattaatgatgtatgtggt 120209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 30460753 - 30460680
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||    
T  30460753 cctccagtcactaatataagcaaaaatttactttttagatagattcaattaatgatgtatgtggtctttattat 30460680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 17773641 - 17773579
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  17773641 cctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtg 17773579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 31536311 - 31536384
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||||  |||||||    
T  31536311 cctccggtcactaatataagcaaaaatcaactttttagatacatttatttaatgatgtatgtggtttttattat 31536384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 21506601 - 21506530
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || |||||||    
T  21506601 tccggtcattaatataagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattat 21506530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 21506463 - 21506525
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  21506463 cctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 21506525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 248 - 315
Target Start/End: Original strand, 17268019 - 17268086
Alignment:
Q  248 gtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||| |||||| || |||||| ||||||||||||||||||| |||||||| |||||||    
T  17268019 gtcactaatataagtaaaaatctattttttaaatacatttaattaatgatgtatgtggtctttattat 17268086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 21998176 - 21998117
Alignment:
Q  245 ccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  21998176 ccggtcaccaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtg 21998117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 31536455 - 31536392
Alignment:
Q  241 acctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||    
T  31536455 acctccagtcactaatataagcaaaaatttactttttaaatacattcaattaattatgcatgtg 31536392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 17773501 - 17773574
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| |||||||||||||| |||||||  |||||||||||||||| ||| ||||||| |||||||| |||||||    
T  17773501 cctctggtcactaatataaacaaaaatccactttttagatacattcaataaatgatgtatgtggtctttattat 17773574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 28577601 - 28577654
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatg 295  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  28577601 cctcaggtcactaatataagcaaaaattcattttttagatacatttaattaatg 28577654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 30397725 - 30397788
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtgg 305  Q
    ||||||||||||||||||| |||||||  || ||||||||||||| ||||||||||| ||||||    
T  30397725 cctccggtcactaatataaacaaaaatccacattttagatacattcaattaatgatgtatgtgg 30397788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 28577741 - 28577679
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||  |||||||||||||||| ||||||||||||||||| ||||||| ||| |||||    
T  28577741 cctccggtcgttaatataagcaaaaatatactttttagatacattcaattaataatgtatgtg 28577679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 30397864 - 30397802
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||    |||||||||||||| ||||||||||| |||||    
T  30397864 cctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgtg 30397802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 4844293 - 4844354
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||||| ||||||||||||||| | | |||||||||||||| ||||||||||| ||||||||    
T  4844293 cggtcagtaatataagcaaaaaatcattttttagatacattcaattaatgatgtatgtggtc 4844354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 8146089 - 8146016
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||| |||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  8146089 cctccggtcactaatataagcaaaaaattacattttagattcattcatttaatgatgtacatggtctttattat 8146016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 6560797 - 6560741
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||||||||||||||||||| |||| |||||||| |||| | |||||||||    
T  6560797 cctccggtcactaatataagcaaaaaattacattttagattcattcatttaatgatg 6560741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 18097060 - 18097116
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||| ||||||||||| ||||| |||||||| |||||| |||||||||    
T  18097060 cctccggtcactattataagcaaaagtttacattttagattcatttatttaatgatg 18097116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 4844401 - 4844359
Alignment:
Q  256 tataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||||||| |||||||||||||||| |||||||||||    
T  4844401 tataagcaaaaattcactttttagatacattcaattaatgatg 4844359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 6894814 - 6894868
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatga 296  Q
    ||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||||    
T  6894814 cctccggtcactattataaacaaaaatttacattttagattcatttaatgaatga 6894868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 21998039 - 21998101
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||| ||||||||||||||||||||  | |||||||||||||| ||||||| ||| |||||    
T  21998039 cctccgatcactaatataagcaaaaatacattttttagatacattcaattaataatgtatgtg 21998101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 6560657 - 6560722
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| ||||||||    
T  6560657 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtc 6560722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 12349933 - 12349880
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||||||||||||||| |||| | ||||||||| ||||||||| ||||||||    
T  12349933 aaaatttactttttagattcattcatttaatgatgtatgtggtccatattatga 12349880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 28555087 - 28555014
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| |||||||| ||||||||||||| ||| |||||||| |||||| ||||||||| |  ||||| |||||||    
T  28555087 cctctggtcactattataagcaaaaatctacattttagattcatttatttaatgatgcacatggtctttattat 28555014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 31398226 - 31398291
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||||||||||||||||  ||| |||||| | |||| | ||||||||| ||||||||    
T  31398226 cctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtc 31398291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 31398366 - 31398293
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||| ||||||||||| ||||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  31398366 cctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattat 31398293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 31632252 - 31632183
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    |||| ||||||||||||| |||||| |||| || ||||||||| | |||||||| ||||||| |||||||    
T  31632252 tactccctccggtcactattataagtaaaagttgactttttaggttcatttaataaatgatgtatgtggt 31632183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 8449716 - 8449660
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||| |||||||||||||| |  |||||||| |||| |||||||||||    
T  8449716 cctccggtcactattataagcaaaaattaatattttagattcattcaattaatgatg 8449660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 8458520 - 8458464
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    ||||||||||||| |||||||||||||| |  |||||||| |||| |||||||||||    
T  8458520 cctccggtcactattataagcaaaaattaatattttagattcattcaattaatgatg 8458464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 14310661 - 14310597
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||||||||||||||||| |   |||||||| |||| | ||||||||| |||||||    
T  14310661 cctccggtcactaatataagcaaaaatctgtattttagattcattcatttaatgatgtatgtggt 14310597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 17268151 - 17268091
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||| |||| || ||||| |||||||||| ||||||| ||| |||||    
T  17268151 tccggtcactaatataagtaaaagttcactttctagatacattcaattaataatgtatgtg 17268091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 8363616 - 8363671
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgat 297  Q
    ||||| |||| |||||||| ||||||| || |||||||||||||| ||||||||||    
T  8363616 cctccagtcattaatataaacaaaaatatattttttagatacattcaattaatgat 8363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 2988799 - 2988853
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatga 296  Q
    |||||||||| ||||||||||||||| |||| |||||| | |||||| |||||||    
T  2988799 cctccggtcattaatataagcaaaaaattacattttaggttcatttatttaatga 2988853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 3203816 - 3203746
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| ||||| ||||||| |||||||||||||  ||||||||| | |||||||| ||||||| || |||||    
T  3203816 tacttcctccagtcactattataagcaaaaatcaactttttaggttcatttaataaatgatgtatttggtc 3203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 13276486 - 13276556
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttat 312  Q
    ||||||||||| |||||||||||||||| |  |||||| | |||| ||| ||||||| |||||||| ||||    
T  13276486 cctccggtcacaaatataagcaaaaattcatgttttaggttcattcaataaatgatgtatgtggtctttat 13276556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 16121110 - 16121040
Alignment:
Q  237 tactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    |||| |||||| |||||| |||||||||||||  ||||||||||| |||| ||| ||||||| || |||||    
T  16121110 tactccctccgatcactattataagcaaaaatcaactttttagattcattaaataaatgatgtatttggtc 16121040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 10258444 - 10258371
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||| ||| || |||||| ||||| | ||||||||||| |||| ||||||||||| || ||||| |||||||    
T  10258444 cctccgatcattattataagtaaaaaataactttttagattcattcaattaatgatgtatatggtcattattat 10258371  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 13277162 - 13277101
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||| ||||||| ||||||||||  |||||||| |||| ||| ||||||| ||||    
T  13277162 cctccggtcacaaatataaacaaaaatttatattttagattcattcaataaatgatgtatgt 13277101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 13281537 - 13281590
Alignment:
Q  245 ccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||||| ||||||||||||| ||  |||||||| |||| |||||||||||    
T  13281537 ccggtcactattataagcaaaaatctagattttagattcattcaattaatgatg 13281590  T

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Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 13462933 - 13462994
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgt 303  Q
    ||||||||||||| || |||||||| ||| |||||||||| |||| ||| ||||||| ||||    
T  13462933 cctccggtcactattagaagcaaaagtttgctttttagatccattcaataaatgatgtatgt 13462994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 13506838 - 13506907
Alignment:
Q  246 cggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||| ||||||||||| ||||| | ||| || |||||||||||||||| || || || |||||||    
T  13506838 cggtcactattataagcaaaagtttacatcttaaattcatttaattaatgatgtatatgatctttattat 13506907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 28554947 - 28555012
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||| |||||||||||||| |||||||||| |||||| | |||| | ||||||||| || |||||    
T  28554947 cctccagtcactaatataagtaaaaatttacattttaggttcattcatttaatgatgtatatggtc 28555012  T

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Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 11637171 - 11637243
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||| |||||||||||  |||| ||||| || |||| ||||||||||| || || || |||||||    
T  11637171 ctccggtcactattataagcaaaacattacattttaaattcattcaattaatgatgtatatgatctttattat 11637243  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 26527330 - 26527266
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    |||||| |||||| |||||||||||||| || |||||||| |||| | | ||||||| |||||||    
T  26527330 cctccgttcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggt 26527266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 30460615 - 30460675
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||| ||||||||||||||||  ||||| |||||| ||| ||| ||||||| |||||    
T  30460615 tccggtcaataatataagcaaaaatccactttgtagatatattcaatcaatgatgtatgtg 30460675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 33122966 - 33122922
Alignment:
Q  271 actttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||| |||||||| ||||||| ||||||||| ||||||    
T  33122966 actttttagattcatttaataaatgatgcatgtggtccatattat 33122922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 33123143 - 33123103
Alignment:
Q  250 cactaatataagcaaaaatttactttttagatacatttaat 290  Q
    ||||| ||||||||||| ||||||||||||||||| |||||    
T  33123143 cactattataagcaaaagtttactttttagatacacttaat 33123103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 315
Target Start/End: Original strand, 246800 - 246868
Alignment:
Q  247 ggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||  |||||||    
T  246800 ggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtggtttttattat 246868  T

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Target: scaffold0007; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 246935 - 246879
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||    
T  246935 cctctggtcattaatataagcaaaaatctactttttagatacattcaattaatgatg 246879  T

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Target: scaffold0039 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 54526 - 54455
Alignment:
Q  244 tccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||||||||||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||    
T  54526 tccgatcactaatataagcaaaaattcactctttagatacattcaattaatgatgtatgtggtccttattat 54455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 54388 - 54444
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatg 298  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  54388 cctccggttactaatataagcaaaaatctactttttagatacattcaattaatgatg 54444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 315
Target Start/End: Original strand, 3938 - 4023
Alignment:
Q  230 aatattgtactacctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||  |||||||||||||||||||||||||||  |||||||| ||||||| | ||||||||| |||||||| |||||||    
T  3938 aatattgtacaccctccggtcactaatataagcaaaaatacactttttaaatacattaatttaatgatgtatgtggtctttattat 4023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 4090 - 4028
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| |||| || |||||    
T  4090 cctctggtcactaatataagcaaaaatttactttttagatacattcaataaatgttgtatgtg 4028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 61302 - 61239
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtgg 305  Q
    ||||||||||||||||||| |||||||  || ||||||||||||| ||||||||||| ||||||    
T  61302 cctccggtcactaatataaacaaaaatccacattttagatacattcaattaatgatgtatgtgg 61239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 61163 - 61225
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    |||||||||||||||||||||||||||    |||||||||||||| ||||||||||| |||||    
T  61163 cctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgtg 61225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 65933 - 65984
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||| |||||||    
T  65933 aatataagcaaaa-tttactttttagattcattcatttaatgatgtatgtggt 65984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 17167 - 17228
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtg 304  Q
    ||||||||||||||||||||| |||||| |||||||| ||| ||| ||||||||||| |||||    
T  17167 cctccggtcactaatataagc-aaaattcactttttatatatattcaattaatgatgtatgtg 17228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 17306 - 17251
Alignment:
Q  243 ctccggtcactaatataagcaaaaattt-actttttagatacatttaattaatgat 297  Q
    ||||| ||||||||||||| ||||| || |||||||| ||||||||||||||||||    
T  17306 ctccgatcactaatataagaaaaaaattcactttttaaatacatttaattaatgat 17251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 13717 - 13770
Alignment:
Q  264 aaaatttactttttagatacatttaattaatgatgaatgtggtccttattatga 317  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||||| ||||||||    
T  13717 aaaattgactttttagattcattcaattaatgatgtatgtggtccatattatga 13770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 139436 - 139371
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||| |||||| ||||||||||||| |||| |||||||| |||| | ||||||||| ||||||||    
T  139436 cctcccgtcactcatataagcaaaaaattacattttagattcattcatttaatgatgtatgtggtc 139371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 11607 - 11657
Alignment:
Q  265 aaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||||||||||||| | |||| ||||||||||| ||||||||| ||||||    
T  11607 aaatttactttttaggttcattcaattaatgatgtatgtggtccatattat 11657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 24746 - 24681
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtc 307  Q
    ||||||||||||| |||||||||||||| |  |||||||| |||| | | ||||||| ||||||||    
T  24746 cctccggtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtc 24681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 6213 - 6286
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    ||||| |||||||||||||||||||| |||| |||| ||| |||| | ||||||||| |  ||||| |||||||    
T  6213 cctccagtcactaatataagcaaaaaattacattttcgattcattcatttaatgatgcacatggtctttattat 6286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 5515 - 5464
Alignment:
Q  254 aatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggt 306  Q
    |||||||| |||| ||||| |||||||| |||||||||||||||| |||||||    
T  5515 aatataag-aaaattttacattttagattcatttaattaatgatgtatgtggt 5464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 4347 - 4399
Alignment:
Q  242 cctccggtcactaatataagcaaaaatttactttttagatacatttaattaat 294  Q
    ||||| ||||||||||||||||||| ||||  |||||||| |||| |||||||    
T  4347 cctccagtcactaatataagcaaaactttatattttagattcattcaattaat 4399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 7796 - 7724
Alignment:
Q  243 ctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgaatgtggtccttattat 315  Q
    |||| ||||||| ||||||||||||| ||| |||||||| |||| | ||||||||| |  ||||| |||||||    
T  7796 ctcctgtcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattat 7724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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