View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8350_high_29 (Length: 221)

Name: NF8350_high_29
Description: NF8350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8350_high_29
NF8350_high_29
[»] scaffold0160 (4 HSPs)
scaffold0160 (1-202)||(35976-36177)
scaffold0160 (1-112)||(36215-36325)
scaffold0160 (30-112)||(36363-36445)
scaffold0160 (162-202)||(35653-35693)
[»] chr3 (66 HSPs)
chr3 (2-163)||(18199235-18199396)
chr3 (2-160)||(36093956-36094114)
chr3 (2-155)||(36094147-36094300)
chr3 (2-161)||(26943588-26943747)
chr3 (2-165)||(18256766-18256926)
chr3 (2-106)||(6953283-6953387)
chr3 (1-112)||(855059-855170)
chr3 (5-106)||(36947859-36947960)
chr3 (6-106)||(36947721-36947821)
chr3 (70-162)||(851106-851198)
chr3 (2-106)||(6953422-6953526)
chr3 (2-106)||(6953665-6953769)
chr3 (6-144)||(6953808-6953944)
chr3 (2-99)||(18199133-18199230)
chr3 (20-163)||(52419531-52419673)
chr3 (2-99)||(35713141-35713238)
chr3 (5-106)||(36947581-36947682)
chr3 (2-99)||(47724552-47724649)
chr3 (72-160)||(26943780-26943868)
chr3 (2-94)||(31483606-31483698)
chr3 (5-88)||(36947998-36948081)
chr3 (2-88)||(36093865-36093951)
chr3 (2-99)||(49565985-49566082)
chr3 (2-99)||(1883333-1883430)
chr3 (2-99)||(11823954-11824051)
chr3 (2-99)||(26943936-26944033)
chr3 (2-99)||(36094904-36095001)
chr3 (6-88)||(18199401-18199483)
chr3 (2-88)||(26949097-26949183)
chr3 (2-92)||(43509692-43509782)
chr3 (5-99)||(36091001-36091095)
chr3 (2-99)||(26943025-26943122)
chr3 (2-99)||(33006047-33006143)
chr3 (2-99)||(35860522-35860619)
chr3 (2-99)||(36095119-36095216)
chr3 (2-69)||(6953561-6953628)
chr3 (1-67)||(854955-855021)
chr3 (2-99)||(851252-851349)
chr3 (11-99)||(38662177-38662264)
chr3 (2-88)||(38662133-38662219)
chr3 (38-99)||(18256681-18256742)
chr3 (2-67)||(26949027-26949092)
chr3 (33-99)||(13458625-13458691)
chr3 (33-99)||(17657175-17657241)
chr3 (33-99)||(4585533-4585599)
chr3 (33-94)||(12257888-12257949)
chr3 (35-92)||(16647460-16647517)
chr3 (161-202)||(13454485-13454526)
chr3 (161-202)||(24132147-24132188)
chr3 (161-202)||(29619621-29619662)
chr3 (161-202)||(35184449-35184490)
chr3 (161-202)||(35184599-35184640)
chr3 (161-202)||(42648046-42648087)
chr3 (161-202)||(44509710-44509751)
chr3 (34-68)||(4585622-4585656)
chr3 (34-68)||(12257972-12258006)
chr3 (34-68)||(13458568-13458602)
chr3 (34-68)||(16647542-16647576)
chr3 (161-202)||(13458855-13458896)
chr3 (161-202)||(44509411-44509452)
chr3 (161-202)||(49808343-49808384)
chr3 (161-202)||(54320606-54320647)
chr3 (162-202)||(13010587-13010627)
chr3 (11-62)||(18199393-18199443)
chr3 (161-198)||(966754-966791)
chr3 (161-202)||(35184297-35184338)
[»] chr5 (45 HSPs)
chr5 (1-163)||(20844880-20845042)
chr5 (2-160)||(23179426-23179584)
chr5 (1-167)||(20842234-20842400)
chr5 (1-163)||(20844636-20844798)
chr5 (2-155)||(23179240-23179393)
chr5 (1-112)||(20844440-20844551)
chr5 (1-112)||(20842438-20842549)
chr5 (1-112)||(20845080-20845191)
chr5 (2-111)||(32672736-32672844)
chr5 (2-88)||(32672849-32672935)
chr5 (2-88)||(23179589-23179675)
chr5 (6-99)||(10037189-10037282)
chr5 (2-99)||(12651292-12651389)
chr5 (2-99)||(23178415-23178512)
chr5 (2-99)||(23178673-23178770)
chr5 (2-99)||(23184344-23184441)
chr5 (2-99)||(34757338-34757435)
chr5 (2-99)||(39874172-39874269)
chr5 (2-93)||(23180082-23180173)
chr5 (2-92)||(32671996-32672086)
chr5 (33-99)||(3611844-3611910)
chr5 (33-99)||(20109130-20109196)
chr5 (33-99)||(20109898-20109964)
chr5 (35-92)||(30094369-30094426)
chr5 (161-202)||(2396824-2396865)
chr5 (161-202)||(2397548-2397589)
chr5 (161-202)||(34757210-34757251)
chr5 (161-202)||(34761685-34761726)
chr5 (161-204)||(39871602-39871645)
chr5 (34-68)||(3611787-3611821)
chr5 (34-68)||(30094310-30094344)
chr5 (164-202)||(34757070-34757108)
chr5 (161-202)||(23775552-23775593)
chr5 (161-202)||(23776480-23776521)
chr5 (161-202)||(23862506-23862547)
chr5 (161-202)||(23863433-23863474)
chr5 (161-202)||(24325862-24325903)
chr5 (161-202)||(24347865-24347906)
chr5 (161-202)||(39871940-39871981)
chr5 (11-62)||(32672841-32672891)
chr5 (34-68)||(20109073-20109107)
chr5 (34-68)||(20109708-20109742)
chr5 (34-68)||(20109841-20109875)
chr5 (70-112)||(20844836-20844878)
chr5 (164-202)||(24271243-24271281)
[»] chr4 (47 HSPs)
chr4 (2-160)||(41862204-41862362)
chr4 (2-163)||(41946721-41946884)
chr4 (2-160)||(22673728-22673886)
chr4 (2-160)||(52680154-52680312)
chr4 (2-123)||(41862395-41862516)
chr4 (2-88)||(41861931-41862017)
chr4 (2-88)||(41862022-41862108)
chr4 (2-88)||(41862113-41862199)
chr4 (2-99)||(16905836-16905933)
chr4 (2-99)||(29363835-29363932)
chr4 (2-99)||(35756423-35756520)
chr4 (2-99)||(42345117-42345214)
chr4 (2-99)||(42345238-42345335)
chr4 (2-94)||(21380325-21380417)
chr4 (2-88)||(41946630-41946716)
chr4 (2-88)||(52680317-52680403)
chr4 (2-99)||(28380258-28380355)
chr4 (2-99)||(29363507-29363604)
chr4 (2-99)||(29363714-29363811)
chr4 (7-92)||(53285650-53285735)
chr4 (11-88)||(22673893-22673970)
chr4 (2-99)||(41863144-41863241)
chr4 (2-99)||(52679741-52679838)
chr4 (2-99)||(53285763-53285860)
chr4 (2-99)||(30390808-30390905)
chr4 (9-88)||(41946546-41946625)
chr4 (2-99)||(22673294-22673391)
chr4 (6-68)||(41946484-41946546)
chr4 (33-99)||(14148570-14148636)
chr4 (33-99)||(14148424-14148490)
chr4 (33-99)||(19518506-19518572)
chr4 (33-99)||(21585322-21585388)
chr4 (33-99)||(25819683-25819749)
chr4 (161-202)||(10257548-10257589)
chr4 (161-202)||(40910211-40910252)
chr4 (161-202)||(53575915-53575956)
chr4 (34-68)||(14148513-14148547)
chr4 (34-68)||(19518449-19518483)
chr4 (34-68)||(21585265-21585299)
chr4 (34-68)||(25819772-25819806)
chr4 (11-62)||(41861975-41862025)
chr4 (11-62)||(41862066-41862116)
chr4 (11-62)||(41862157-41862207)
chr4 (62-99)||(22673689-22673726)
chr4 (58-99)||(29363649-29363690)
chr4 (161-202)||(40912316-40912357)
chr4 (128-160)||(41862511-41862543)
[»] chr1 (52 HSPs)
chr1 (2-164)||(35598148-35598310)
chr1 (2-163)||(39514199-39514360)
chr1 (2-160)||(2052057-2052215)
chr1 (1-164)||(45507394-45507557)
chr1 (11-165)||(35597724-35597876)
chr1 (1-112)||(45507245-45507356)
chr1 (2-99)||(22194875-22194972)
chr1 (2-99)||(22195045-22195142)
chr1 (2-99)||(36455222-36455319)
chr1 (2-99)||(49791604-49791701)
chr1 (2-94)||(48647756-48647848)
chr1 (2-88)||(2051966-2052052)
chr1 (2-99)||(48958565-48958662)
chr1 (2-99)||(50704586-50704683)
chr1 (2-94)||(15689392-15689484)
chr1 (71-163)||(38211808-38211900)
chr1 (5-99)||(49791883-49791977)
chr1 (2-99)||(2585415-2585512)
chr1 (2-99)||(7476024-7476121)
chr1 (2-99)||(7476585-7476682)
chr1 (2-99)||(9530051-9530148)
chr1 (2-99)||(42492470-42492567)
chr1 (2-99)||(45507065-45507162)
chr1 (2-92)||(15689232-15689322)
chr1 (2-99)||(2052552-2052649)
chr1 (2-99)||(13929123-13929220)
chr1 (2-88)||(35598057-35598143)
chr1 (2-88)||(35597680-35597765)
chr1 (30-88)||(39514136-39514194)
chr1 (33-99)||(2051777-2051843)
chr1 (33-99)||(36871037-36871103)
chr1 (33-99)||(49791079-49791145)
chr1 (33-99)||(49791456-49791522)
chr1 (161-202)||(30501351-30501392)
chr1 (161-202)||(11158692-11158733)
chr1 (161-202)||(15208938-15208979)
chr1 (161-202)||(19766984-19767025)
chr1 (161-202)||(29307836-29307877)
chr1 (63-106)||(26209958-26210001)
chr1 (34-68)||(49791022-49791056)
chr1 (34-68)||(49791399-49791433)
chr1 (161-202)||(30501027-30501068)
chr1 (161-202)||(39924199-39924240)
chr1 (161-202)||(40235627-40235668)
chr1 (161-202)||(40236572-40236613)
chr1 (11-62)||(35598101-35598151)
chr1 (11-62)||(39514152-39514202)
chr1 (62-99)||(2052217-2052254)
chr1 (34-66)||(2051720-2051752)
chr1 (34-66)||(36870980-36871012)
chr1 (55-99)||(49791754-49791798)
chr1 (55-99)||(49792030-49792074)
[»] chr2 (64 HSPs)
chr2 (1-165)||(1925634-1925798)
chr2 (2-158)||(13905694-13905850)
chr2 (2-160)||(13899794-13899952)
chr2 (2-160)||(26453329-26453487)
chr2 (2-160)||(40603165-40603323)
chr2 (1-162)||(35433130-35433287)
chr2 (1-158)||(27999645-27999802)
chr2 (1-158)||(28090379-28090536)
chr2 (1-158)||(28096702-28096859)
chr2 (2-106)||(32287265-32287369)
chr2 (5-106)||(32287404-32287505)
chr2 (2-99)||(19640906-19641003)
chr2 (2-99)||(19839499-19839596)
chr2 (2-99)||(36440093-36440190)
chr2 (2-90)||(40603325-40603413)
chr2 (2-88)||(13905855-13905941)
chr2 (2-88)||(26453492-26453578)
chr2 (2-99)||(5001110-5001207)
chr2 (2-99)||(5012780-5012877)
chr2 (2-99)||(19641068-19641165)
chr2 (2-99)||(19839661-19839758)
chr2 (2-99)||(26452895-26452992)
chr2 (2-99)||(180206-180303)
chr2 (2-99)||(980013-980110)
chr2 (2-99)||(980466-980563)
chr2 (2-99)||(1501790-1501887)
chr2 (2-99)||(2444119-2444216)
chr2 (2-99)||(13899096-13899193)
chr2 (2-106)||(32287001-32287105)
chr2 (2-94)||(42111658-42111750)
chr2 (30-112)||(1925514-1925596)
chr2 (30-112)||(35433010-35433092)
chr2 (2-99)||(14039713-14039810)
chr2 (2-99)||(40602731-40602828)
chr2 (2-99)||(21591174-21591271)
chr2 (11-99)||(204360-204448)
chr2 (88-163)||(27999854-27999929)
chr2 (88-163)||(28090588-28090663)
chr2 (88-163)||(28096911-28096986)
chr2 (5-69)||(32287142-32287206)
chr2 (73-145)||(35433287-35433359)
chr2 (89-142)||(1271961-1272014)
chr2 (2-68)||(980261-980327)
chr2 (33-99)||(2296976-2297042)
chr2 (33-99)||(25643737-25643803)
chr2 (33-99)||(6120837-6120903)
chr2 (161-202)||(45060852-45060893)
chr2 (161-202)||(25647966-25648007)
chr2 (161-202)||(30409738-30409779)
chr2 (161-202)||(45061012-45061053)
chr2 (162-202)||(45060573-45060613)
chr2 (33-99)||(13900052-13900121)
chr2 (34-68)||(2297065-2297099)
chr2 (34-68)||(6120926-6120960)
chr2 (34-68)||(25643826-25643860)
chr2 (161-202)||(45060722-45060763)
chr2 (161-197)||(45061164-45061200)
chr2 (11-62)||(13905847-13905897)
chr2 (163-202)||(41354687-41354726)
chr2 (34-68)||(13900144-13900178)
chr2 (62-99)||(26453290-26453327)
chr2 (62-99)||(40603126-40603163)
chr2 (161-202)||(45158705-45158746)
chr2 (113-141)||(30915428-30915456)
[»] chr7 (34 HSPs)
chr7 (2-160)||(22004400-22004558)
chr7 (2-160)||(22004209-22004367)
chr7 (2-163)||(13927057-13927217)
chr7 (4-160)||(7891177-7891333)
chr7 (2-133)||(29954217-29954347)
chr7 (2-102)||(3061577-3061677)
chr7 (2-94)||(3600141-3600233)
chr7 (5-112)||(13927376-13927481)
chr7 (2-88)||(22004563-22004649)
chr7 (2-99)||(13400683-13400780)
chr7 (2-99)||(20959379-20959476)
chr7 (2-99)||(45112713-45112810)
chr7 (2-88)||(7891340-7891426)
chr7 (7-92)||(5090921-5091006)
chr7 (2-99)||(5091034-5091131)
chr7 (2-99)||(7890743-7890840)
chr7 (2-106)||(31097950-31098054)
chr7 (2-99)||(7884939-7885036)
chr7 (2-99)||(22003511-22003608)
chr7 (5-99)||(32656690-32656784)
chr7 (2-99)||(32656790-32656887)
chr7 (43-124)||(3600053-3600132)
chr7 (24-94)||(7889201-7889271)
chr7 (37-99)||(26161925-26161987)
chr7 (1-68)||(13927271-13927338)
chr7 (33-99)||(27712699-27712765)
chr7 (34-99)||(32035234-32035299)
chr7 (33-99)||(16719033-16719099)
chr7 (33-99)||(17693243-17693309)
chr7 (34-68)||(16719122-16719156)
chr7 (34-68)||(17693332-17693366)
chr7 (34-68)||(27712788-27712822)
chr7 (11-62)||(22004555-22004605)
chr7 (62-99)||(7891138-7891175)
[»] scaffold0121 (4 HSPs)
scaffold0121 (2-160)||(41126-41284)
scaffold0121 (2-88)||(41289-41375)
scaffold0121 (2-88)||(41380-41466)
scaffold0121 (2-99)||(40825-40922)
[»] chr6 (8 HSPs)
chr6 (6-163)||(3589182-3589339)
chr6 (2-99)||(2271852-2271949)
chr6 (2-94)||(29371676-29371768)
chr6 (2-99)||(33049710-33049807)
chr6 (2-92)||(24456436-24456526)
chr6 (2-92)||(29374228-29374318)
chr6 (2-99)||(33007275-33007371)
chr6 (33-99)||(29921026-29921092)
[»] chr8 (16 HSPs)
chr8 (2-99)||(37985435-37985532)
chr8 (2-92)||(22732199-22732289)
chr8 (2-99)||(18489931-18490028)
chr8 (2-99)||(19958069-19958166)
chr8 (2-99)||(24014105-24014202)
chr8 (2-99)||(21637062-21637159)
chr8 (2-92)||(24011201-24011291)
chr8 (2-75)||(41377801-41377874)
chr8 (5-106)||(18489753-18489864)
chr8 (34-99)||(18278552-18278617)
chr8 (33-99)||(410098-410164)
chr8 (51-99)||(37985586-37985634)
chr8 (161-202)||(41494010-41494051)
chr8 (161-202)||(45400502-45400543)
chr8 (34-68)||(410041-410075)
chr8 (161-199)||(13086024-13086062)
[»] scaffold1113 (1 HSPs)
scaffold1113 (2-99)||(2467-2564)
[»] scaffold0097 (1 HSPs)
scaffold0097 (2-99)||(44623-44720)
[»] scaffold0119 (2 HSPs)
scaffold0119 (89-142)||(29223-29276)
scaffold0119 (89-142)||(35476-35529)
[»] scaffold0642 (2 HSPs)
scaffold0642 (33-99)||(303-369)
scaffold0642 (34-68)||(392-426)
[»] scaffold0374 (2 HSPs)
scaffold0374 (33-99)||(107-173)
scaffold0374 (34-68)||(50-84)
[»] scaffold0345 (2 HSPs)
scaffold0345 (33-99)||(10214-10280)
scaffold0345 (34-68)||(10303-10337)
[»] scaffold0105 (2 HSPs)
scaffold0105 (33-99)||(28700-28766)
scaffold0105 (34-68)||(28643-28677)
[»] scaffold0506 (1 HSPs)
scaffold0506 (161-202)||(825-866)


Alignment Details
Target: scaffold0160 (Bit Score: 182; Significance: 1e-98; HSPs: 4)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 36177 - 35976
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  36177 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggatgggaattaggaaatatggttaggttttgaaggagggaaaagtggctac 36078  T
Q  101 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagatttttaaaatttatctcttaattaaacaggtttaattg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  36077 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagatttttaaagtttatctcttaattaaataggttttattg 35978  T
Q  201 aa 202  Q
    ||    
T  35977 aa 35976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 36325 - 36215
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||    
T  36325 gtaggttttaggaggagggaaattaggaaatcatggttagg-tttggaggaggggaattaggaaatatggttaggttttaaaggagggaaaagtgggtac 36227  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  36226 aattttttaggt 36215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 36445 - 36363
Alignment:
Q  30 atcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaattttttaggt 112  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  36445 atcatggttagggtttggaggaggggaattaggatatatggttaggttttgaaggagggaaaagtggctacaattttttaggt 36363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 35693 - 35653
Alignment:
Q  162 atttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  35693 atttttaaagtttatctcttaattaaagaggtttaattgaa 35653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 18199396 - 18199235
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  18199396 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 18199297  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18199296 attttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaagat 18199235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 36093956 - 36094114
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  36093956 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 36094055  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36094056 attttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaa 36094114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 36094147 - 36094300
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36094147 taggttttaggaagagggaaattaggaaatcatggttagggttgggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctata 36094246  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaa 155  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36094247 attttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaa 36094300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 26943747 - 26943588
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| |    
T  26943747 taggttttaggaggagggaaattaagaaatcatggttagggtttggaggaggggaattagtaaatatggttaggttttgaaggagggaaaagtgactata 26943648  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaag 161  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  26943647 attttttaggttaaatattaggtggaattatggcaacaatgttaggtttataaataaaag 26943588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 18256766 - 18256926
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    |||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  18256766 taggttttaggaggagtgaagttagaaaatcatagttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtgactaca 18256865  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagattt 165  Q
    ||||||||| |||||||||||||||||||| |||||   ||||| |||||||||||||||||||    
T  18256866 attttttagcttaaatattaggtggaattacggcaa---tgttaagtttataaataaaagattt 18256926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 6953283 - 6953387
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  6953283 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggttaca 6953382  T
Q  102 atttt 106  Q
    |||||    
T  6953383 atttt 6953387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 855170 - 855059
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  855170 gtaggttttaggaggagggaaattaggaaatcatagttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtgtctac 855071  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  855070 aattttttaggt 855059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 36947859 - 36947960
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaatt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  36947859 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggtattaggaaatatggttaggttttgaaggagggaaaagtggctacaatt 36947958  T
Q  105 tt 106  Q
    ||    
T  36947959 tt 36947960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 36947721 - 36947821
Alignment:
Q  6 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaattt 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36947721 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggtattaggaaatatggttaggttttgaaggagggaaaagtggctacaattt 36947820  T
Q  106 t 106  Q
    |    
T  36947821 t 36947821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 851198 - 851106
Alignment:
Q  70 gttaggttttgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaaga 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  851198 gttaggttttgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaataaaaga 851106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 6953422 - 6953526
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| ||||    
T  6953422 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaagggagggaaaagtggttaca 6953521  T
Q  102 atttt 106  Q
    |||||    
T  6953522 atttt 6953526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 6953665 - 6953769
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  6953665 taggttttaacaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaagtggttaca 6953764  T
Q  102 atttt 106  Q
    |||||    
T  6953765 atttt 6953769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 6953808 - 6953944
Alignment:
Q  6 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaattt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||  |    
T  6953808 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagt-gctacaa--t 6953904  T
Q  106 tttaggtt-aaatattaggtggaattagggcaacagtgtt 144  Q
    |||||||| |||||||| ||  ||||||||||| ||||||    
T  6953905 tttaggttaaaatattaagtataattagggcaagagtgtt 6953944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 18199133 - 18199230
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18199133 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 18199230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 52419531 - 52419673
Alignment:
Q  20 aaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaattttttaggttaaatat 119  Q
    |||||||||||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  52419531 aaattaggaaatcatggttaggatttggagaaggggaattagaaaatatggttaggttttgaaggagggaaaagtggctacga-tttttaggttaaatat 52419629  T
Q  120 taggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    |||||  ||||| |||||||||| |  |||||| ||||| ||||    
T  52419630 taggtataattaaggcaacagtgctttgtttatgaataagagat 52419673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 35713238 - 35713141
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  35713238 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 35713141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 36947581 - 36947682
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaatt 104  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  36947581 gttttaggaggagggaaattaaaaaatcatagttagggtttggaggaggggaatttggaaatatggttaggttttgaaggagggaaaagtggctacaatt 36947680  T
Q  105 tt 106  Q
    ||    
T  36947681 tt 36947682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 47724649 - 47724552
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  47724649 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 47724552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 26943868 - 26943780
Alignment:
Q  72 taggttttgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26943868 taggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaa 26943780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 31483698 - 31483606
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31483698 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 31483606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 36947998 - 36948081
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36947998 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 36948081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 36093865 - 36093951
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  36093865 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 36093951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 49565985 - 49566082
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  49565985 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaagttgcta 49566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 1883333 - 1883430
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  1883333 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 1883430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 11824051 - 11823954
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  11824051 taggttttatgaggagtgaagttaggaaatcatggttagggtttggagaaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 11823954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 26944033 - 26943936
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  26944033 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 26943936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 36094904 - 36095001
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  36094904 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaagttgcta 36095001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 18199483 - 18199401
Alignment:
Q  6 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18199483 ttttaggaggaggaaaattaagaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 18199401  T

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Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 26949183 - 26949097
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  26949183 taggttttaggaagagggaaattaggaaatcatggttagagtttggaggaggggagttaggaaatatggttaggttttgaaggaggg 26949097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 43509692 - 43509782
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    |||||||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  43509692 taggttttaggaggagtgaagttaggaaatcatggttggggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaa 43509782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 36091001 - 36091095
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||| ||||    
T  36091001 gttttaggaggagtgaagttaggaaatcatggttagggtttggaggagaggaactagggaatatggttaggttttgaaggagggaaaagttgcta 36091095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 26943122 - 26943025
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||| ||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  26943122 taggctttaggaggagtgaagttagaaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 26943025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 33006047 - 33006143
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  33006047 taggttttcggaggagtgaagttaggaaatgatggttagggtttggaggaggggaattaggaaata-ggttaggttttgaaggagggaaaagttgcta 33006143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 35860522 - 35860619
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||||| || ||||||||||||| |||||||||| |||||||||||||| ||||    
T  35860522 taggttttaggaggagtgaagttaggaaatcatggttagcgtttggaggaaggaaattaggaaatatggttaggttttaaaggagggaaaagttgcta 35860619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 36095119 - 36095216
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||||| || ||||||||||||| |||||||||| |||||||||||||| ||||    
T  36095119 taggttttaggaggagtgaagttaggaaatcatggttagcgtttggaggaaggaaattaggaaatatggttaggttttaaaggagggaaaagttgcta 36095216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 6953561 - 6953628
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatt 69  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6953561 taggttttaggaggagggaaattagaaaatcatggttagggtttggaggaggggaattaggaaatatt 6953628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 855021 - 854955
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaata 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  855021 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagaaaata 854955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 851349 - 851252
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||| |||| |||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||    
T  851349 taggttttaggaggagtgaagttagcaaattatggttagagtttggaggaggggaattagagaatatggttaggttttgaaggagggaaaagttgcta 851252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 38662177 - 38662264
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  38662177 ggaggaggggaattaggaaat-atggttaggttttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagttgcta 38662264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 38662133 - 38662219
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    |||||||||||||||| ||| |||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  38662133 taggttttaggaggagtgaagttagaaaatcattgttatggtttggaggaggggaattaggaaatatggttaggttttggaggaggg 38662219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 18256681 - 18256742
Alignment:
Q  38 tagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  18256681 tagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 18256742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 26949092 - 26949027
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaata 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||    
T  26949092 taggttttaggaggagggaaattagaaaatcatggttagggtttggaggatgggaattatgaaata 26949027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 13458625 - 13458691
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  13458625 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 13458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 17657241 - 17657175
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  17657241 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 17657175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 4585599 - 4585533
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  4585599 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 4585533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 12257949 - 12257888
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  12257949 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagt 12257888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 16647517 - 16647460
Alignment:
Q  35 ggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  16647517 ggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 16647460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 13454485 - 13454526
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  13454485 gatttttaaagtttatctcttaattaaacaggtttaattgaa 13454526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 24132147 - 24132188
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  24132147 gatttttaaagtttatctcttaattaaacaggtttaattgaa 24132188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 29619621 - 29619662
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  29619621 gatttttaaagtttatctcttaattaaacaggtttaattgaa 29619662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 35184490 - 35184449
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  35184490 gatttttaaagtttatctcttaattaaacaggtttaattgaa 35184449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 35184640 - 35184599
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  35184640 gatttttaaagtttatctcttaattaaacaggtttaattgaa 35184599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 42648046 - 42648087
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  42648046 gatttttaaagtttatctcttaattaaacaggtttaattgaa 42648087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 44509751 - 44509710
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  44509751 gatttttaaagtttatctcttaattaaacaggtttaattgaa 44509710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 4585656 - 4585622
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  4585656 tggttagggtttggaggaggggaattaggaaatat 4585622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 12258006 - 12257972
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  12258006 tggttagggtttggaggaggggaattaggaaatat 12257972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 13458568 - 13458602
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  13458568 tggttagggtttggaggaggggaattaggaaatat 13458602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 16647576 - 16647542
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  16647576 tggttagggtttggaggaggggaattaggaaatat 16647542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 13458855 - 13458896
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  13458855 gatttttaaagtttatctcttaattaaacagttttaattgaa 13458896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 44509452 - 44509411
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  44509452 gatttttaaagtttatctcttaattaaacagatttaattgaa 44509411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 49808343 - 49808384
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  49808343 gatttttaaagtttatatcttaattaaacaggtttaattgaa 49808384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 54320606 - 54320647
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  54320606 gatttttaaagtttatctctaaattaaacaggtttaattgaa 54320647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 13010587 - 13010627
Alignment:
Q  162 atttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  13010587 atttttaaagtttatctcttaattaaacatgtttaattgaa 13010627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 18199443 - 18199393
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagg 62  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||    
T  18199443 ggaggaggggaattaggaaat-atggttaggttttgaaggaggggaattagg 18199393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 966754 - 966791
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaat 198  Q
    |||||||||||||||||||||||||||| || ||||||    
T  966754 gatttttaaaatttatctcttaattaaatagatttaat 966791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 35184338 - 35184297
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||| |||||||||||||| ||||||||||    
T  35184338 gatttttaaagtttatttcttaattaaacagatttaattgaa 35184297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20845042 - 20844880
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20845042 gtaggttttaggaggaggtaaattaggaaatcatagttagggtttggaggaagggaattaggaaatattgttaggttttgaaggaggaaaaagtggctac 20844943  T
Q  101 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20844942 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 20844880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 23179584 - 23179426
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  23179584 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 23179485  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23179484 attttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaa 23179426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 20842400 - 20842234
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20842400 gtaggttttaggagaagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaaatggctac 20842301  T
Q  101 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagattttt 167  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  20842300 aattttttaagttaaatattaggtggaattagagcagcagtgttacgtttataaataaaagattttt 20842234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20844798 - 20844636
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| || | ||    
T  20844798 gtaggttttaggaggaggaaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatcgttaggttttgaatgagggaaaaatgaccac 20844699  T
Q  101 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20844698 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 20844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 23179393 - 23179240
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  23179393 taggttttaggaagagggaaattaggaaatcatggttagggttgggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 23179294  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaa 155  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23179293 attttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaa 23179240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20844551 - 20844440
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  20844551 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggagggaaaaatggctac 20844452  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  20844451 aattttttaggt 20844440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20842549 - 20842438
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||| |||||||| ||||||||| |||||||    
T  20842549 gtaggttttaggaggagggaaattagaaaatcatggttagggtttggaggaggggaattatgaaatatggttatgttttgaatgagggaaaaatggctac 20842450  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  20842449 aattttttaggt 20842438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20845191 - 20845080
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  20845191 gtaggttttatgaggagggaaattacgaaatcatggttagggtttgaaggaggagaattaggaaatatagttaggttttgaaggagggaaaagtggccac 20845092  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  20845091 aattttttaggt 20845080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 32672844 - 32672736
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||| |    
T  32672844 taggttttaggaggagggaaattaggaaatcatagttagggtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaa-tggctata 32672746  T
Q  102 attttttagg 111  Q
    ||||||||||    
T  32672745 attttttagg 32672736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 32672935 - 32672849
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32672935 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 32672849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 23179675 - 23179589
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  23179675 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 23179589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 10037282 - 10037189
Alignment:
Q  6 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  10037282 ttttaggaggagtgaagttaggaaatgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 10037189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 12651389 - 12651292
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12651389 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 12651292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 23178512 - 23178415
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  23178512 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 23178415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 23178770 - 23178673
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  23178770 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaagttgcta 23178673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 23184441 - 23184344
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  23184441 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 23184344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 34757435 - 34757338
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  34757435 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 34757338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 39874269 - 39874172
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  39874269 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 39874172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 23180173 - 23180082
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaag 93  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  23180173 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaag 23180082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 32672086 - 32671996
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  32672086 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaa 32671996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 3611844 - 3611910
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  3611844 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 3611910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 20109130 - 20109196
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  20109130 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 20109196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 20109898 - 20109964
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  20109898 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 20109964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 30094369 - 30094426
Alignment:
Q  35 ggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  30094369 ggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 30094426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 2396824 - 2396865
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  2396824 gatttttaaagtttatctcttaattaaacaggtttaattgaa 2396865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 2397548 - 2397589
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  2397548 gatttttaaagtttatctcttaattaaacaggtttaattgaa 2397589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 34757251 - 34757210
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  34757251 gatttttaaagtttatctcttaattaaacaggtttaattgaa 34757210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 34761726 - 34761685
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  34761726 gatttttaaagtttatctcttaattaaacaggtttaattgaa 34761685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 39871645 - 39871602
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaata 204  Q
    |||||||| | |||||||||||||||||||||||||||||||||    
T  39871645 gatttttatagtttatctcttaattaaacaggtttaattgaata 39871602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 3611787 - 3611821
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  3611787 tggttagggtttggaggaggggaattaggaaatat 3611821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 30094310 - 30094344
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  30094310 tggttagggtttggaggaggggaattaggaaatat 30094344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 34757108 - 34757070
Alignment:
Q  164 ttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  34757108 ttttaaagtttatctcttaattaaacaggtttaattgaa 34757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 23775593 - 23775552
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  23775593 gatttttaaagtttatctcttaaataaacaggtttaattgaa 23775552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 23776521 - 23776480
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  23776521 gatttttaaagtttatctcttaattaaacaagtttaattgaa 23776480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 23862547 - 23862506
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  23862547 gatttttaaagtttatctcttaaataaacaggtttaattgaa 23862506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 23863474 - 23863433
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  23863474 gatttttaaagtttatctcttaattaaacaagtttaattgaa 23863433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 24325862 - 24325903
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  24325862 gatttttaaagtttatctcttaattaaataggtttaattgaa 24325903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 24347906 - 24347865
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  24347906 gatttttaaagtttatctcttaattaaataggtttaattgaa 24347865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 39871981 - 39871940
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  39871981 gatttttataatttaactcttaattaaacaggtttaattgaa 39871940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 32672891 - 32672841
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagg 62  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||    
T  32672891 ggaggaggggaattaggaaat-atggttaggttttgaaggaggggaattagg 32672841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 20109073 - 20109107
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||| ||||||    
T  20109073 tggttagggtttggaggaggggaattagaaaatat 20109107  T

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Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 20109708 - 20109742
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||| ||||||    
T  20109708 tggttagggtttggaggaggggaattagaaaatat 20109742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 20109841 - 20109875
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||| ||||||    
T  20109841 tggttagggtttggaggaggggaattagaaaatat 20109875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 20844878 - 20844836
Alignment:
Q  70 gttaggttttgaaggagggaaaagtggctacaattttttaggt 112  Q
    |||||||||| |||||||||||| || ||||||||||||||||    
T  20844878 gttaggttttcaaggagggaaaaatgactacaattttttaggt 20844836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 24271281 - 24271243
Alignment:
Q  164 ttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  24271281 ttttaaagtttatctcttaattaaataggtttaattgaa 24271243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 41862204 - 41862362
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  41862204 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 41862303  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41862304 attttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaa 41862362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 41946721 - 41946884
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatt--gttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  41946721 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatatggttaggttttgaaggagggaaaagtggcta 41946820  T
Q  100 caattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41946821 taattttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaagat 41946884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 22673886 - 22673728
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  22673886 taggttttaggaggagggaaattaggaaattatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 22673787  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  22673786 attttttaggttaaatattagttggaattagggcaacaatgttaggtttataaataaaa 22673728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 52680312 - 52680154
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |    
T  52680312 taggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctata 52680213  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  52680212 attttttaggttaaatattagttggaattagggcaacaatgttaggtttataaataaaa 52680154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 41862395 - 41862516
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||| ||||| |||||||||| |    
T  41862395 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaaatagaaaatatggttaggttttgaaagagggtaaagtggctata 41862494  T
Q  102 attttttaggttaaatattagg 123  Q
    ||||||||||||||||||||||    
T  41862495 attttttaggttaaatattagg 41862516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 41861931 - 41862017
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41861931 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 41862022 - 41862108
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41862022 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 41862113 - 41862199
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41862113 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 16905933 - 16905836
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  16905933 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 16905836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 29363835 - 29363932
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  29363835 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 29363932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 35756520 - 35756423
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  35756520 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 35756423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 42345214 - 42345117
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  42345214 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 42345117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 42345335 - 42345238
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  42345335 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 42345238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 21380417 - 21380325
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21380417 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 21380325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 41946630 - 41946716
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  41946630 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 41946716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 52680403 - 52680317
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  52680403 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 52680317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 28380355 - 28380258
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  28380355 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggggggaaaagttgcta 28380258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 29363507 - 29363604
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  29363507 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagttgcta 29363604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 29363714 - 29363811
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||    
T  29363714 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggatggaaaagttgcta 29363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 53285735 - 53285650
Alignment:
Q  7 tttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  53285735 tttaggaggagtgaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 53285650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 22673970 - 22673893
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22673970 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 22673893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 41863144 - 41863241
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  41863144 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaagttgcta 41863241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 52679838 - 52679741
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  52679838 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagagaaaagttgcta 52679741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 53285860 - 53285763
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||    
T  53285860 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggaggaaaaagttgcta 53285763  T

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Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 30390808 - 30390905
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| ||||    
T  30390808 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaagttgcta 30390905  T

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Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 41946546 - 41946625
Alignment:
Q  9 taggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41946546 taggaggaggaaaattaagaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggaggg 41946625  T

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Target: chr4; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 22673391 - 22673294
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||| |||  |||||| ||||    
T  22673391 taggttttaggaggagtgaagttaggaaatcatggttaaggtttggaggagggaaattaggaaatatggttaggttttgaaagagataaaagttgcta 22673294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 41946484 - 41946546
Alignment:
Q  6 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatat 68  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41946484 ttttaggaggaggaaaattaagaaatcatggttagggtttggaggaggggaattaggaaatat 41946546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 14148570 - 14148636
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  14148570 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 14148636  T

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Target: chr4; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 14148424 - 14148490
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||| ||||||| ||||    
T  14148424 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagagaaaagttgcta 14148490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 19518506 - 19518572
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| || ||||||||||| ||||    
T  19518506 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 19518572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 21585322 - 21585388
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| || ||||||||||| ||||    
T  21585322 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 21585388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 25819749 - 25819683
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||| ||||| |||||||||||||| ||||    
T  25819749 atggttaaggtttggaggaggagaattaggaaatatggttatgttttaaaggagggaaaagttgcta 25819683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 10257548 - 10257589
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  10257548 gatttttaaagtttatctcttaattaaacaggtttaattgaa 10257589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 40910252 - 40910211
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  40910252 gatttttaaagtttatctcttaattaaacaggtttaattgaa 40910211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 53575956 - 53575915
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  53575956 gatttttaaagtttatctcttaattaaacaggtttaattgaa 53575915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 14148513 - 14148547
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  14148513 tggttagggtttggaggaggggaattaggaaatat 14148547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 19518449 - 19518483
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  19518449 tggttagggtttggaggaggggaattaggaaatat 19518483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 21585265 - 21585299
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  21585265 tggttagggtttggaggaggggaattaggaaatat 21585299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 25819806 - 25819772
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  25819806 tggttagggtttggaggaggggaattaggaaatat 25819772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 41861975 - 41862025
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagg 62  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||    
T  41861975 ggaggaggggaattaggaaat-atggttaggttttgaaggaggggaattagg 41862025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 41862066 - 41862116
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagg 62  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||    
T  41862066 ggaggaggggaattaggaaat-atggttaggttttgaaggaggggaattagg 41862116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 41862157 - 41862207
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagg 62  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||    
T  41862157 ggaggaggggaattaggaaat-atggttaggttttgaaggaggggaattagg 41862207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 22673726 - 22673689
Alignment:
Q  62 gaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  22673726 gaaatatggttaggttttgaaggagggaaaagttgcta 22673689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 29363649 - 29363690
Alignment:
Q  58 ttaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||    
T  29363649 ttaggaaatatggttagattttgaaggagggaaaagttgcta 29363690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 40912316 - 40912357
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||| | ||||||||||    
T  40912316 gatttttaaagtttatctcttaattaaactgatttaattgaa 40912357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 41862511 - 41862543
Alignment:
Q  128 attagggcaacagtgttaggtttataaataaaa 160  Q
    |||||||||||| ||||||||||||||||||||    
T  41862511 attagggcaacaatgttaggtttataaataaaa 41862543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 35598148 - 35598310
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  35598148 taggttttagtaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 35598247  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagatt 164  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35598248 attttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaagatt 35598310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 39514199 - 39514360
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  39514199 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 39514298  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  39514299 attttttaggttaaatattaggtggaactagggcaacattgttaggtttataaataaaagat 39514360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 2052057 - 2052215
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |    
T  2052057 taggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctata 2052156  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  2052157 attttttaggttaaatattagttggaattagggcaacaatgttaggtttataaataaaa 2052215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45507394 - 45507557
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||||    
T  45507394 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaagaaaggaaaaatggctac 45507493  T
Q  101 aat-tttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagatt 164  Q
    ||| ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  45507494 aatatttttaggttaaatattaggt-gaattaggacaacaatgttaggtttataaataaaagatt 45507557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 35597724 - 35597876
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaattttttag 110  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  35597724 ggaggagggaa-ttaggaaat-atggttagggtttggaggaggggaattaggaaatatgattaggttttgaaggagggaaaagtggctataattttttag 35597821  T
Q  111 gttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagattt 165  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  35597822 gttaaatattaggtggaattagggcaacaattttaggtttataaataaaagattt 35597876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 45507245 - 45507356
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45507245 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctac 45507344  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  45507345 aattttttaggt 45507356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 22194972 - 22194875
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  22194972 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 22194875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 22195142 - 22195045
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  22195142 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 22195045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 36455319 - 36455222
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36455319 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 36455222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 49791604 - 49791701
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  49791604 taggttttaggaggagggaaattaggaaatcatggttagggtttggaagagaggaattaggaaatatcgttaggttttgaaggagggaaaagttgcta 49791701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 48647848 - 48647756
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48647848 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 48647756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 2051966 - 2052052
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  2051966 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 2052052  T

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Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 48958662 - 48958565
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  48958662 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 48958565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 50704683 - 50704586
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  50704683 taggttttaggaggagtgaagttaggaaatcatggttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 50704586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 15689484 - 15689392
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  15689484 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagt 15689392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 38211808 - 38211900
Alignment:
Q  71 ttaggttttgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  38211808 ttaggttttaaaggagggaaaaatggctacaattttttaggttaaatattaggtggaattagtgcaacattgttaggtttataaataaaagat 38211900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 49791883 - 49791977
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  49791883 gttttaggaggagggaaattagaaaatcatggttagggtttggaagagaggaattaggaaatatcgttaggttttgaaggagggaaaagttgcta 49791977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 2585512 - 2585415
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  2585512 taggttttaggaggagtgaagttaggaaatcatggttagggtttagaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 2585415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 7476121 - 7476024
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  7476121 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7476024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 7476682 - 7476585
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  7476682 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7476585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 9530148 - 9530051
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  9530148 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 9530051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 42492567 - 42492470
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  42492567 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 42492470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 45507065 - 45507162
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  45507065 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaagggaattagggaatatggttaggttttgaaggagggaaaagttgcta 45507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 15689322 - 15689232
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  15689322 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaa 15689232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 2052552 - 2052649
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| ||||    
T  2052552 taggttttaggaggagtgaagttaggaaattatggttagggtttggaggagggaaattagaaaatatggttaggttttgaaggagggaaaagttgcta 2052649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 13929123 - 13929220
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| ||||    
T  13929123 taggttttaggatgagtgaagttaggaaatcatggttagggtttggaggaggggaatttggtaatatggttaggttttgaaggagggaaaagttgcta 13929220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 35598057 - 35598143
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||    
T  35598057 taggttttaggaggaggaaaattaggaaatcatggttagggtttggaggagggaaattaggaaacatgcttaggttttgaaggaggg 35598143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 35597680 - 35597765
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |||| |||||||    
T  35597680 taggttttaggaggaggaaaattaggaaatcatggttaggatttggagga-gggaattaggaaatatggttagggtttggaggaggg 35597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 39514136 - 39514194
Alignment:
Q  30 atcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39514136 atcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 39514194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 2051777 - 2051843
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  2051777 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 2051843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 36871037 - 36871103
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  36871037 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 36871103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 49791079 - 49791145
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||| ||||| |||||||||||||| ||||    
T  49791079 atggttaaggtttggaggaggagaattaggaaatatggttaagttttaaaggagggaaaagttgcta 49791145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 49791456 - 49791522
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||| ||||| |||||||||||||| ||||    
T  49791456 atggttaaggtttggaggaggagaattaggaaatatggttaagttttaaaggagggaaaagttgcta 49791522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 30501351 - 30501392
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30501351 gatttttaaaatttatctcttaattaaacaggtttaattgaa 30501392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 11158692 - 11158733
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  11158692 gatttttaaagtttatctcttaattaaacaggtttaattgaa 11158733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 15208938 - 15208979
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  15208938 gatttttaaagtttatctcttaattaaacaggtttaattgaa 15208979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 19766984 - 19767025
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  19766984 gatttttaaagtttatctcttaattaaacaggtttaattgaa 19767025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 29307877 - 29307836
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  29307877 gatttttaaagtttatctcttaattaaacaggtttaattgaa 29307836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 26210001 - 26209958
Alignment:
Q  63 aaatattgttaggttttgaaggagggaaaagtggctacaatttt 106  Q
    |||||| |||||||||| ||||||||||||||||||||||||||    
T  26210001 aaatatggttaggttttaaaggagggaaaagtggctacaatttt 26209958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 49791022 - 49791056
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  49791022 tggttagggtttggaggaggggaattaggaaatat 49791056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 49791399 - 49791433
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  49791399 tggttagggtttggaggaggggaattaggaaatat 49791433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 30501027 - 30501068
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  30501027 gatttttaaagtttatctcttaattaaacaagtttaattgaa 30501068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 39924240 - 39924199
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  39924240 gatttttaaagtttatctcttaatcaaacaggtttaattgaa 39924199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 40235627 - 40235668
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  40235627 gatttttaaagtttatctcttaattagacaggtttaattgaa 40235668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 40236572 - 40236613
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  40236572 gatttttaaagtttatctcttaattaaacatgtttaattgaa 40236613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 35598101 - 35598151
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagg 62  Q
    |||||||||||||||||||| |||| ||||| |||| |||||||||||||||    
T  35598101 ggaggagggaaattaggaaa-catgcttaggttttgaaggaggggaattagg 35598151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 39514152 - 39514202
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagg 62  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||    
T  39514152 ggaggaggggaattaggaaat-atggttaggttttgaaggaggggaattagg 39514202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 2052217 - 2052254
Alignment:
Q  62 gaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  2052217 gaaatatggttaggttttgaaggagggaaaagttgcta 2052254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 2051720 - 2051752
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaat 66  Q
    ||||||||||||||||||||||||||| |||||    
T  2051720 tggttagggtttggaggaggggaattatgaaat 2051752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 36870980 - 36871012
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaat 66  Q
    ||||||||||||||||||||||||||| |||||    
T  36870980 tggttagggtttggaggaggggaattatgaaat 36871012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 49791754 - 49791798
Alignment:
Q  55 gaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||| |||| ||||| |||||||||||||| ||||    
T  49791754 gaattaggaaatatggttaagttttaaaggagggaaaagttgcta 49791798  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 49792030 - 49792074
Alignment:
Q  55 gaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||| |||| ||||| |||||||||||||| ||||    
T  49792030 gaattaggaaatatggttaagttttaaaggagggaaaagttgcta 49792074  T

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Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 1925634 - 1925798
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  ||||    
T  1925634 gtaggttttaggaggagggaaattaggaaataatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggagggaaaagtatctac 1925733  T
Q  101 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagattt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1925734 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagattt 1925798  T

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Target: chr2; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 13905850 - 13905694
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  13905850 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 13905751  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataa 158  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13905750 attttttgggttaaatattaggtggaattagggcaacaatgttaggtttataaataa 13905694  T

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Target: chr2; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 13899952 - 13899794
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |    
T  13899952 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggagggtaattaggaaatatggttaggttttgaaggagggaaaagtggctata 13899853  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  13899852 attttttaggttaaatattcggtggaattagggcaacaatgttaggtttataaataaaa 13899794  T

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Target: chr2; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 26453487 - 26453329
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |    
T  26453487 taggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctata 26453388  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  26453387 attttttaggttaaatattagttggaattagggcaacaatgttaggtttataaataaaa 26453329  T

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Target: chr2; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 40603323 - 40603165
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |    
T  40603323 taggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctata 40603224  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  40603223 attttttaggttaaatattagttggaattagggcaacaatgttaggtttataaataaaa 40603165  T

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Target: chr2; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 35433130 - 35433287
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  35433130 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaagaaatatggttaggttttgaaggagggaaaagtggctac 35433229  T
Q  101 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaaga 162  Q
    || ||||||||||||||||||||||||||||||||||||    |||||||||||||||||||    
T  35433230 aactttttaggttaaatattaggtggaattagggcaaca----taggtttataaataaaaga 35433287  T

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Target: chr2; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 27999645 - 27999802
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||||    
T  27999645 gtaggttttaggatgagggaaattaggaaatcatgattagggtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctac 27999744  T
Q  101 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataa 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27999745 aattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaataa 27999802  T

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Target: chr2; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28090379 - 28090536
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||||    
T  28090379 gtaggttttaggatgagggaaattaggaaatcatgattagggtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctac 28090478  T
Q  101 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataa 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28090479 aattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaataa 28090536  T

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Target: chr2; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28096702 - 28096859
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctac 100  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||||    
T  28096702 gtaggttttaggatgagggaaattaggaaatcatgattagggtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctac 28096801  T
Q  101 aattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataa 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28096802 aattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaataa 28096859  T

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Target: chr2; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 32287369 - 32287265
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  32287369 taggttttaggaggatggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaaggggttaca 32287270  T
Q  102 atttt 106  Q
    |||||    
T  32287269 atttt 32287265  T

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Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 32287505 - 32287404
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaatt 104  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  32287505 gttttaggaggagggaaattaggagatcatggttagggtttggaggaggggaattaggaaatatgattaggttttgaaggagggaaaagtggttacaatt 32287406  T
Q  105 tt 106  Q
    ||    
T  32287405 tt 32287404  T

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Target: chr2; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 19641003 - 19640906
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19641003 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 19640906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 19839596 - 19839499
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19839596 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 19839499  T

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Target: chr2; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 36440093 - 36440190
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36440093 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaagttgcta 36440190  T

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Target: chr2; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 40603413 - 40603325
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaa 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  40603413 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggagggaa 40603325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 13905941 - 13905855
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13905941 taggttttaggaggagggaaattaggaaatgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 13905855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 26453578 - 26453492
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  26453578 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 26453492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 5001110 - 5001207
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  5001110 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaataaggttaggttttgaaggagggaaaagttgcta 5001207  T

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Target: chr2; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 5012780 - 5012877
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  5012780 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaataaggttaggttttgaaggagggaaaagttgcta 5012877  T

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Target: chr2; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 19641165 - 19641068
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||| |||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19641165 taggttttatgaggagtgaagttaggaaatcatggctagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 19641068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 19839758 - 19839661
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||| |||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19839758 taggttttatgaggagtgaagttaggaaatcatggctagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 19839661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 26452992 - 26452895
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  26452992 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaagttgcta 26452895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 180303 - 180206
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  180303 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 180206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 980013 - 980110
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  980013 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 980110  T

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Target: chr2; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 980466 - 980563
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  980466 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 980563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 1501887 - 1501790
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  1501887 taggttttaggaggagtgaagttagaaaatcattgttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 1501790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 2444216 - 2444119
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  2444216 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 2444119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 13899193 - 13899096
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  13899193 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 13899096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 32287105 - 32287001
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| | |||||||||| |||||||||||||||  ||||    
T  32287105 taggttttaggaggagggaaattagaaaatcatggttagggtttggaggagaggaatcaggaaatgtagttaggttttaaaggagggaaaagtgattaca 32287006  T
Q  102 atttt 106  Q
    |||||    
T  32287005 atttt 32287001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 42111658 - 42111750
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  42111658 taggttttaggaggagtgaagttaggaaatgatggttagggtttggaggaggggaattagaaaatatggttaggttttgaaggagggaaaagt 42111750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 1925514 - 1925596
Alignment:
Q  30 atcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaattttttaggt 112  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  1925514 atcatggttagggtttggagaaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctacaattttttaggt 1925596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 35433010 - 35433092
Alignment:
Q  30 atcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaattttttaggt 112  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  35433010 atcatggttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatattttaggt 35433092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 14039810 - 14039713
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  14039810 taggttttaggaggagtgaagttaggaaatcattgttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 14039713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 40602828 - 40602731
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||||||||| ||||    
T  40602828 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattagaaaatatggttagattttgaaggagggaaaagttgcta 40602731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 21591174 - 21591271
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||  ||||| ||||||||||||||||||||||||| ||||    
T  21591174 taggttttaggaggagtgaagttaggaaatcatggttaggctttgaaggaggggaattagagaatatggttaggttttgaaggagggaaaagttgcta 21591271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 204448 - 204360
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| ||||    
T  204448 ggaggagtgaagttaggaaatcatggttagggtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaagttgcta 204360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 27999854 - 27999929
Alignment:
Q  88 gaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  27999854 gaaaagtggttacaattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaatagaagat 27999929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 28090588 - 28090663
Alignment:
Q  88 gaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  28090588 gaaaagtggttacaattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaatagaagat 28090663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 28096911 - 28096986
Alignment:
Q  88 gaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  28096911 gaaaagtggttacaattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaatagaagat 28096986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 32287206 - 32287142
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatt 69  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  32287206 gttttaggaggagggaaattaggaaatcatggttaaggtttggaggaggggaattagaaaatatt 32287142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 35433287 - 35433359
Alignment:
Q  73 aggttttgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtgtta 145  Q
    |||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  35433287 aggttttgaaggagagaaaagtggctacaactttttaaattaaatattaggtggaattagggcaacagtgtta 35433359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 1272014 - 1271961
Alignment:
Q  89 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtg 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1272014 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtg 1271961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 980261 - 980327
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatat 68  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  980261 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatat 980327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 2297042 - 2296976
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  2297042 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 2296976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 25643803 - 25643737
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  25643803 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 25643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 6120903 - 6120837
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| ||||||| |||||| |||||||||| |||||||||||||| ||||    
T  6120903 atggttaaggtttggaggaggagaattagaaaatatggttaggttttaaaggagggaaaagttgcta 6120837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 45060852 - 45060893
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45060852 gatttttaaaatttatctcttaattaaacaggtttaattgaa 45060893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 25648007 - 25647966
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  25648007 gatttttaaagtttatctcttaattaaacaggtttaattgaa 25647966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 30409738 - 30409779
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  30409738 gatttttaaagtttatctcttaattaaacaggtttaattgaa 30409779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 45061012 - 45061053
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  45061012 gatttttaaagtttatctcttaattaaacaggtttaattgaa 45061053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 45060573 - 45060613
Alignment:
Q  162 atttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  45060573 atttttaaagtttatctcttaattaaacaggtttaattgaa 45060613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 13900121 - 13900052
Alignment:
Q  33 atggttagggtttggaggagggg---aattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |   ||||||||||||| |||||||||| ||||| |||||||| ||||    
T  13900121 atggttagggtttggaggaggaggagaattaggaaatatggttaggttttaaaggatggaaaagttgcta 13900052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 2297099 - 2297065
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  2297099 tggttagggtttggaggaggggaattaggaaatat 2297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 6120960 - 6120926
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  6120960 tggttagggtttggaggaggggaattaggaaatat 6120926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 25643860 - 25643826
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  25643860 tggttagggtttggaggaggggaattaggaaatat 25643826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 45060722 - 45060763
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  45060722 gatttttaaagtttatctcttaattaaacatgtttaattgaa 45060763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 45061164 - 45061200
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaa 197  Q
    |||||||||| ||||||||||||||||||||||||||    
T  45061164 gatttttaaagtttatctcttaattaaacaggtttaa 45061200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 13905897 - 13905847
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagg 62  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||    
T  13905897 ggaggaggggaattaggaaat-atggttaggttttgaaggaggggaattagg 13905847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 41354726 - 41354687
Alignment:
Q  163 tttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  41354726 tttttaaagtttatctcttaattaaacaggtttatttgaa 41354687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 13900178 - 13900144
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||| ||||||    
T  13900178 tggttagggtttggaggaggggaattagaaaatat 13900144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 26453327 - 26453290
Alignment:
Q  62 gaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  26453327 gaaatatggttaggttttgaaggagggaaaagttgcta 26453290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 40603163 - 40603126
Alignment:
Q  62 gaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  40603163 gaaatatggttaggttttgaaggagggaaaagttgcta 40603126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 45158705 - 45158746
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| ||||||||||||||||||| | |||||||||    
T  45158705 gatttttaaagtttatctcttaattaaacatgattaattgaa 45158746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 30915456 - 30915428
Alignment:
Q  113 taaatattaggtggaattagggcaacagt 141  Q
    |||||||||||||||||||||||||||||    
T  30915456 taaatattaggtggaattagggcaacagt 30915428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 22004558 - 22004400
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  22004558 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 22004459  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22004458 attttttgggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaa 22004400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 22004367 - 22004209
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |    
T  22004367 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggagggtaattaggaaatatggttaggttttgaaggagggaaaagtggctata 22004268  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  22004267 attttttaggttaaatattcggtggaattagggcaacaatgttaggtttataaataaaa 22004209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 13927217 - 13927057
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  13927217 taggttttagcaggagggaaattaggaaatcatggttaaggtttggaggagggaaattaggaaatatagttaggttttgaaggaggg-aaagtggctaca 13927119  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  13927118 attttttaggttaaatattaggtgaaattagggcaacaatgttaggtttataaataaaagat 13927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 7891333 - 7891177
Alignment:
Q  4 ggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaat 103  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | |||| |||    
T  7891333 ggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaaatagctataat 7891234  T
Q  104 tttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  7891233 tttttaggttaaatattagttggaattagggcaacaatgttaggtttataaataaaa 7891177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 29954347 - 29954217
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  29954347 taggttttaggaggagggaaattaggagatcatggttagggtttggaggaggggagttatgaaatatggttaggttttgaaggagggaaaagtggctaca 29954248  T
Q  102 attttttaggtt-aaatattaggtggaattagg 133  Q
    |  ||||||||| |||||||||||  |||||||    
T  29954247 a--ttttaggttaaaatattaggtataattagg 29954217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 3061577 - 3061677
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  3061577 taggttttaggaggagggaaattaggagatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggaaaaagtggctaca 3061676  T
Q  102 a 102  Q
    |    
T  3061677 a 3061677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 3600141 - 3600233
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3600141 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatcgttaggttttgaaggagggaaaagt 3600233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 13927481 - 13927376
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaatt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||    
T  13927481 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaag--gggaaaagtggcaacaatt 13927384  T
Q  105 ttttaggt 112  Q
    ||||||||    
T  13927383 ttttaggt 13927376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 22004649 - 22004563
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22004649 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 22004563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 13400683 - 13400780
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  13400683 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 13400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 20959379 - 20959476
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  20959379 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 20959476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 45112810 - 45112713
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  45112810 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 45112713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 7891426 - 7891340
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  7891426 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 7891340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 5091006 - 5090921
Alignment:
Q  7 tttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5091006 tttaggaggagtgaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 5090921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 5091131 - 5091034
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  5091131 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggaaaaagttgcta 5091034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 7890840 - 7890743
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  7890840 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7890743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 31098054 - 31097950
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||| |||| ||||||||    
T  31098054 taggttttaggaggagggaaattaggagatcatagttagggtttggaggaggggagttaagaaatatggttaggttttgaaggaggaaaaaatggctaca 31097955  T
Q  102 atttt 106  Q
    |||||    
T  31097954 atttt 31097950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 7885036 - 7884939
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  7885036 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 22003608 - 22003511
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  22003608 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 22003511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 32656784 - 32656690
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| ||||    
T  32656784 gttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaagttgcta 32656690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 32656887 - 32656790
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||| ||||    
T  32656887 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggtgaattagggaatatggttaggttttgaatgagggaaaagttgcta 32656790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 3600053 - 3600132
Alignment:
Q  43 tttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaattttttaggttaaatattaggt 124  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  3600053 tttggaggaggggaattaggaaatatggttaggttttgaaggaaggaaaagtggctacaa--ttttaggttaaatattaggt 3600132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 7889201 - 7889271
Alignment:
Q  24 taggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  7889201 taggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagt 7889271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 26161987 - 26161925
Alignment:
Q  37 ttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  26161987 ttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 26161925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13927338 - 13927271
Alignment:
Q  1 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatat 68  Q
    ||||||||||| | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  13927338 gtaggttttagcatgagggaaattaggaaatcatggttaaggtttggaggagggaaattaggaaatat 13927271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 27712765 - 27712699
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  27712765 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 27712699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 32035299 - 32035234
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||| |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||    
T  32035299 tggtgagggtttggaggaggggaattagagaatatggttaggttttgaaggagggaaaagttgcta 32035234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 16719099 - 16719033
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| || ||||||||||| ||||    
T  16719099 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 16719033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 17693309 - 17693243
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| || ||||||||||| ||||    
T  17693309 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 17693243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 16719156 - 16719122
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  16719156 tggttagggtttggaggaggggaattaggaaatat 16719122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 17693366 - 17693332
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  17693366 tggttagggtttggaggaggggaattaggaaatat 17693332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 27712822 - 27712788
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  27712822 tggttagggtttggaggaggggaattaggaaatat 27712788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 22004605 - 22004555
Alignment:
Q  11 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattagg 62  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||    
T  22004605 ggaggaggggaattaggaaat-atggttaggttttgaaggaggggaattagg 22004555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 7891175 - 7891138
Alignment:
Q  62 gaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  7891175 gaaatatggttaggttttgaaggagggaaaagttgcta 7891138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 135; Significance: 2e-70; HSPs: 4)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 41284 - 41126
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  41284 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 41185  T
Q  102 attttttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaa 160  Q
    ||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  41184 atttttttggttaaatatttgttggaattagggcaacaatgttaggtttataaataaaa 41126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 41375 - 41289
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  41375 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 41289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 41466 - 41380
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggaggg 88  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  41466 taggttttaggaggatggaaattaggaaatcatggttagggtttggaggaggggaattagaaaatatggttaggttttgaaggaggg 41380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 40922 - 40825
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  40922 taggttttaggaggagtggagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 40825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 6e-70; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 3589339 - 3589182
Alignment:
Q  6 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctacaattt 105  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||    
T  3589339 ttttaggaggaggaaaattaggaaatcatggttagggtttggaggaggggaattagaaaatatggttaggttttgaaggagggaaaaatggctataattt 3589240  T
Q  106 tttaggttaaatattaggtggaattagggcaacagtgttaggtttataaataaaagat 163  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3589239 tttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaagat 3589182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 2271949 - 2271852
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  2271949 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 2271852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 29371676 - 29371768
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  29371676 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagt 29371768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 33049710 - 33049807
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  33049710 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 33049807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 24456526 - 24456436
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  24456526 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaa 24456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 29374228 - 29374318
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    |||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29374228 taggttttaggaggagtgaagttaggaaacgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 29374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 33007275 - 33007371
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||  || |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  33007275 taggttttaggaggagttaagttaggaaatcatggctagggtttg-aggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 33007371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 29921092 - 29921026
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||  ||||||| |||||| ||||    
T  29921092 atggttagggtttggaggaggagaattaggaaatatggttaggtttcaaaggaggaaaaagttgcta 29921026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 37985435 - 37985532
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37985435 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 37985532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 22732199 - 22732289
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  22732199 taggttttaggaggagtgaaattaggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaa 22732289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 18490028 - 18489931
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  18490028 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 18489931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 19958166 - 19958069
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19958166 taggttttaggaggagtgaagttaggaaatcatggttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 19958069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 24014105 - 24014202
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  24014105 taggttttaggaggagtgaagttaggaaatgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 24014202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 21637159 - 21637062
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  21637159 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagaggaattagggaatatggttaggttttgaaggagggaaaagttgcta 21637062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 24011201 - 24011291
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 92  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||||||    
T  24011201 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggagaattatgaaatatggttagattttgaaggagggaaaa 24011291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 41377801 - 41377874
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttagg 75  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41377801 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagg 41377874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 18489753 - 18489864
Alignment:
Q  5 gttttaggaggagggaaattaggaaatcatggtta----------gggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagt 94  Q
    |||||||||||||||||||||||| ||||||||||          ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  18489753 gttttaggaggagggaaattaggagatcatggttagggtttgttagggtttggaggaggggaattaggaaatatggttatgttttgaaggagggaaaagt 18489852  T
Q  95 ggctacaatttt 106  Q
    | ||||||||||    
T  18489853 gactacaatttt 18489864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 18278552 - 18278617
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  18278552 tggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 18278617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 410098 - 410164
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||| ||||    
T  410098 atggttagggtttggaggaggagaattaggaaatatgcttaggttttaaaggagggaaaagttgcta 410164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 37985586 - 37985634
Alignment:
Q  51 aggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37985586 aggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 37985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 41494051 - 41494010
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  41494051 gatttttaaagtttatctcttaattaaacaggtttaattgaa 41494010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 45400502 - 45400543
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  45400502 gatttttaaagtttatctcttaattaaacaggtttaattgaa 45400543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 410041 - 410075
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  410041 tggttagggtttggaggaggggaattaggaaatat 410075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 13086062 - 13086024
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaatt 199  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  13086062 gatttttaaagtttatctcttaattaaacaggtttaatt 13086024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1113 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 2467 - 2564
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  2467 taggttttaggagaagtgaagttaggaaatcatggttagggtttagaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 44623 - 44720
Alignment:
Q  2 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  44623 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 44720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 29223 - 29276
Alignment:
Q  89 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtg 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29223 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtg 29276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 35476 - 35529
Alignment:
Q  89 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtg 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35476 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagtg 35529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 369 - 303
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  369 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 426 - 392
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  426 tggttagggtttggaggaggggaattaggaaatat 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 107 - 173
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||| ||||    
T  107 atggttagggtttggaggaggagaattaggaaatatgcttaggttttaaaggagggaaaagttgcta 173  T

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Target: scaffold0374; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 50 - 84
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  50 tggttagggtttggaggaggggaattaggaaatat 84  T

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Target: scaffold0345 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 10280 - 10214
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  10280 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 10214  T

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Target: scaffold0345; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 10337 - 10303
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  10337 tggttagggtttggaggaggggaattaggaaatat 10303  T

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Target: scaffold0105 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 28700 - 28766
Alignment:
Q  33 atggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggcta 99  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||    
T  28700 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 28766  T

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Target: scaffold0105; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 28643 - 28677
Alignment:
Q  34 tggttagggtttggaggaggggaattaggaaatat 68  Q
    |||||||||||||||||||||||||||||||||||    
T  28643 tggttagggtttggaggaggggaattaggaaatat 28677  T

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Target: scaffold0506 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 825 - 866
Alignment:
Q  161 gatttttaaaatttatctcttaattaaacaggtttaattgaa 202  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  825 gatttttaaagtttatctcttaattaaacaggtttaattgaa 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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